Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 26, 191, 422 |
| AcuI | CTGAAG | 1 cut(s) | 12 |
| AdeI | CACNNNGTG | 1 cut(s) | 368 |
| AgsI | TTSAA | 2 cut(s) | 68, 449 |
| AhlI | ACTAGT | 1 cut(s) | 244 |
| AjnI | CCWGG | 1 cut(s) | 393 |
| AluBI | AGCT | 3 cut(s) | 53, 344, 452 |
| AluI | AGCT | 3 cut(s) | 53, 344, 452 |
| Alw21I | GWGCWC | 1 cut(s) | 217 |
| AlwI | GGATC | 3 cut(s) | 26, 191, 422 |
| AspS9I | GGNCC | 1 cut(s) | 423 |
| AvaII | GGWCC | 1 cut(s) | 423 |
| BbsI | GAAGAC | 2 cut(s) | 165, 339 |
| Bbv12I | GWGCWC | 1 cut(s) | 217 |
| BciT130I | CCWGG | 1 cut(s) | 395 |
| BcuI | ACTAGT | 1 cut(s) | 244 |
| BfaI | CTAG | 2 cut(s) | 113, 245 |
| Bme1390I | CCNGG | 1 cut(s) | 395 |
| Bme18I | GGWCC | 1 cut(s) | 423 |
| BmgT120I | GGNCC | 1 cut(s) | 423 |
| BmrFI | CCNGG | 1 cut(s) | 395 |
| BpiI | GAAGAC | 2 cut(s) | 165, 339 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 204, 236 |
| BpuEI | CTTGAG | 1 cut(s) | 260 |
| Bse1I | ACTGG | 1 cut(s) | 426 |
| BseBI | CCWGG | 1 cut(s) | 395 |
| BseNI | ACTGG | 1 cut(s) | 426 |
| BsgI | GTGCAG | 1 cut(s) | 345 |
| BsiHKAI | GWGCWC | 1 cut(s) | 217 |
| BsiSI | CCGG | 1 cut(s) | 89 |
| BslFI | GGGAC | 1 cut(s) | 255 |
| BsmFI | GGGAC | 1 cut(s) | 255 |
| Bsp1286I | GDGCHC | 1 cut(s) | 217 |
| Bsp143I | GATC | 3 cut(s) | 31, 183, 414 |
| BspHI | TCATGA | 2 cut(s) | 234, 346 |
| BspPI | GGATC | 3 cut(s) | 26, 191, 422 |
| BspQI | GCTCTTC | 2 cut(s) | 205, 383 |
| BsrI | ACTGG | 1 cut(s) | 426 |
| BssMI | GATC | 3 cut(s) | 31, 183, 414 |
| Bst2UI | CCWGG | 1 cut(s) | 395 |
| Bst4CI | ACNGT | 2 cut(s) | 164, 338 |
| Bst6I | CTCTTC | 2 cut(s) | 205, 383 |
| BstKTI | GATC | 3 cut(s) | 34, 186, 417 |
| BstMBI | GATC | 3 cut(s) | 31, 183, 414 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 98, 212 |
| BstNI | CCWGG | 1 cut(s) | 395 |
| BstSCI | CCNGG | 1 cut(s) | 393 |
| BstV2I | GAAGAC | 2 cut(s) | 165, 339 |
| BstX2I | RGATCY | 1 cut(s) | 31 |
| BstYI | RGATCY | 1 cut(s) | 31 |
| BtsIMutI | CAGTG | 1 cut(s) | 433 |
| CciI | TCATGA | 2 cut(s) | 234, 346 |
| Cfr13I | GGNCC | 1 cut(s) | 423 |
| CviAII | CATG | 5 cut(s) | 131, 223, 235, 302, 347 |
| CviJI | RGCY | 5 cut(s) | 26, 53, 344, 393, 452 |
| CviKI_1 | RGCY | 5 cut(s) | 26, 53, 344, 393, 452 |
| DpnI | GATC | 3 cut(s) | 33, 185, 416 |
| DpnII | GATC | 3 cut(s) | 31, 183, 414 |
| DraIII | CACNNNGTG | 1 cut(s) | 368 |
| Eam1104I | CTCTTC | 2 cut(s) | 205, 383 |
| EarI | CTCTTC | 2 cut(s) | 205, 383 |
| Eco47I | GGWCC | 1 cut(s) | 423 |
| Eco57I | CTGAAG | 1 cut(s) | 12 |
| EcoRII | CCWGG | 1 cut(s) | 393 |
| FaeI | CATG | 5 cut(s) | 134, 226, 238, 305, 350 |
| FaiI | YATR | 7 cut(s) | 44, 132, 224, 236, 303, 341, 348 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 150, 182 |
| FaqI | GGGAC | 1 cut(s) | 255 |
| FatI | CATG | 5 cut(s) | 130, 222, 234, 301, 346 |
| FspBI | CTAG | 2 cut(s) | 113, 245 |
| HapII | CCGG | 1 cut(s) | 89 |
| Hin1II | CATG | 5 cut(s) | 134, 226, 238, 305, 350 |
| HindIII | AAGCTT | 1 cut(s) | 450 |
| HinfI | GANTC | 3 cut(s) | 109, 151, 442 |
| HpaII | CCGG | 1 cut(s) | 89 |
| Hpy166II | GTNNAC | 1 cut(s) | 12 |
| Hpy188I | TCNGA | 1 cut(s) | 31 |
| Hpy188III | TCNNGA | 8 cut(s) | 35, 65, 78, 113, 155, 235, 347, 373 |
| Hpy8I | GTNNAC | 1 cut(s) | 12 |
| HpyAV | CCTTC | 3 cut(s) | 232, 308, 397 |
| HpyCH4III | ACNGT | 2 cut(s) | 164, 338 |
| HpyCH4V | TGCA | 4 cut(s) | 120, 171, 206, 362 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 98, 212 |
| Hsp92II | CATG | 5 cut(s) | 134, 226, 238, 305, 350 |
| Kzo9I | GATC | 3 cut(s) | 31, 183, 414 |
| LguI | GCTCTTC | 2 cut(s) | 205, 383 |
| LmnI | GCTCC | 1 cut(s) | 193 |
| LpnPI | CCDG | 8 cut(s) | 48, 102, 157, 372, 380, 386, 407, 439 |
| MaeI | CTAG | 2 cut(s) | 113, 245 |
| MaeIII | GTNAC | 2 cut(s) | 253, 433 |
| MalI | GATC | 3 cut(s) | 33, 185, 416 |
| MboI | GATC | 3 cut(s) | 31, 183, 414 |
| MboII | GAAGA | 8 cut(s) | 170, 222, 334, 344, 388, 400, 412, 437 |
| MflI | RGATCY | 1 cut(s) | 31 |
| MhlI | GDGCHC | 1 cut(s) | 217 |
| MluCI | AATT | 1 cut(s) | 197 |
| MnlI | CCTC | 2 cut(s) | 366, 405 |
| MseI | TTAA | 3 cut(s) | 141, 189, 308 |
| MspI | CCGG | 1 cut(s) | 89 |
| MspR9I | CCNGG | 1 cut(s) | 395 |
| MvaI | CCWGG | 1 cut(s) | 395 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 98, 212 |
| NdeII | GATC | 3 cut(s) | 31, 183, 414 |
| NlaIII | CATG | 5 cut(s) | 134, 226, 238, 305, 350 |
| NmuCI | GTSAC | 2 cut(s) | 253, 433 |
| PagI | TCATGA | 2 cut(s) | 234, 346 |
| PciSI | GCTCTTC | 2 cut(s) | 205, 383 |
| PfeI | GAWTC | 3 cut(s) | 109, 151, 442 |
| Psp6I | CCWGG | 1 cut(s) | 393 |
| PspGI | CCWGG | 1 cut(s) | 393 |
| PspPI | GGNCC | 1 cut(s) | 423 |
| PsuI | RGATCY | 1 cut(s) | 31 |
| SapI | GCTCTTC | 2 cut(s) | 205, 383 |
| SaqAI | TTAA | 3 cut(s) | 141, 189, 308 |
| Sau3AI | GATC | 3 cut(s) | 31, 183, 414 |
| Sau96I | GGNCC | 1 cut(s) | 423 |
| ScrFI | CCNGG | 1 cut(s) | 395 |
| SduI | GDGCHC | 1 cut(s) | 217 |
| SetI | ASST | 4 cut(s) | 55, 346, 408, 454 |
| SinI | GGWCC | 1 cut(s) | 423 |
| SmlI | CTYRAG | 1 cut(s) | 275 |
| SmoI | CTYRAG | 1 cut(s) | 275 |
| SpeI | ACTAGT | 1 cut(s) | 244 |
| Sse9I | AATT | 1 cut(s) | 197 |
| SspMI | CTAG | 2 cut(s) | 113, 245 |
| StyD4I | CCNGG | 1 cut(s) | 393 |
| TaaI | ACNGT | 2 cut(s) | 164, 338 |
| TasI | AATT | 1 cut(s) | 197 |
| TfiI | GAWTC | 3 cut(s) | 109, 151, 442 |
| Tru1I | TTAA | 3 cut(s) | 141, 189, 308 |
| Tru9I | TTAA | 3 cut(s) | 141, 189, 308 |
| TscAI | CASTG | 1 cut(s) | 433 |
| TseFI | GTSAC | 2 cut(s) | 253, 433 |
| Tsp45I | GTSAC | 2 cut(s) | 253, 433 |
| TspDTI | ATGAA | 4 cut(s) | 251, 290, 395, 455 |
| TspGWI | ACGGA | 1 cut(s) | 272 |
| TspRI | CASTG | 1 cut(s) | 433 |
| VpaK11BI | GGWCC | 1 cut(s) | 423 |
| XbaI | TCTAGA | 1 cut(s) | 112 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 19 |
| XspI | CTAG | 2 cut(s) | 113, 245 |