FvH4_6g42550

rRNA processing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000145
Physical Location & Seq
Reverse (-)
33130888 .. 33137713
6826 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g42550.t4

Sequence Viewer

Length: 1902 bp
ATGACAGAAACGAGCAATTCCGGCGTCCTCGTGAACCGCAGCTCTTTCCGTCCGATCTCCAATGCATACCAAGAAAAGTTGAGAGAAGCTTGGCCGATCGTCAAATCGTTGTTGGAAGAACTCGGGCACTCTTGCTCGATGGATAGGGTGGATTCCACAGTCATAATGGAGTCACCAGGCTCTACAGACCCACATAACATCCGCAAGGCAAAATTTCTTTTCGAGCTTTTATGCAAGACTCCTGTTCCGGCACCTCTGGCAATAGAGATGGCACTCCACGGCAGGCAACATGATGTCATCAACCTTGGCACTCAAAATGGTGGAATGTGCAAAAAGTATGGGATCAACAAGGAGGAATTCGATAAATTCTGGAGAGGTCTCAAAAGCTGTTTAAAGGAACTTGAAGATCTGACCCACTGTACTCTTTTTCTGAATAAGGGCACTCTTATTGCTGTGGGTCCTTCTCCACGAGTACGCTGGGTCAGGAATGTTTGGAAATTCTCCATTACTGGAAAGTTAAGTCCTGCCCATGTTATCAGGGTTTTAAACTTGAAGCTGAAACGAACAACCATGATGGGCAATAGCGATAGAATGAGGATAGAGAGGAGTGATTTCGGCGTCCTTGAGCAGCCAAAATCTGATCATTTGGTTAGCGACCCTTTCCTGATGAGGGAGAAAAGCAATTTCAGCGTCCTTGAGCAACCAGAATCCAATCACGAAGTTAACGATCCTCTTCCGGCGGAGAACAGCAAGTGTTTCCATGCTATCTCTGCCGAAAACAGAGCCAAGTTGAATGAAGCTTGGCTGATGGTCGAATCGTCCTTAGAAGAACTCGGGTATTTATGCGCAAAGAGTACGGTTAATTCGACAGTCTTAGTAGTATCACCCTGCCCTACAGACCCAGATATCTTGTGCAAGGCAAAGTTTCTTTTCAAGCTTTTGTGCAAGACTCCTGTTCCGGCACCTCTGGCAATAGATTTGGCACTGCATGGCAGGCAACATGATCTCATTAAGCTTGGCAAAGAATATCGGATAACCAAGGAGAAATTTCACAAACTGCGGAGATGTCTCAAACGCTCTTTAAAGGAACTTGAAGATCTGACCCACTGTACTCTTTTTCTAAACAAAAATACTCTTACCGCTGTGGGTCCCTCTTCAAGATTAGGCTGGGTCAGGAGGGTTTTGAAAGCCTGTATAAGACGAAAGTTGAGTCCCCATCATGTTATCAGTGCGTTCATATGTAAGTTTGATCAAAAAATTGCAAATGCTCGGGATCTTGATGTCTCTAATGTTGAGAATATTGGCCATCTGGTGAACGAAGATGGTGCAGCTGAAGTGACATTGTCCTTTCTTGAAGTAGAAGCAACAAGGATGGAAGGAATTTTGTCAATGGTGGAGTCATCTTTAGAGAAGTATGGCATTTCTTGCACACTGAATCTGATTAACTGTACCGTGACTCTCTCAACAACTGAAGCAACCAAAGAGTACCCGGATGCTTTTGAGAAGGCTAGGCATCTTTTGCAACTTTTGACAACATCCAATGTCCCACCATCTCTGGCTTTCGATTTAGCACTGAATGGCAAGCAGCATGAATTCATCAAGATGGGGTTTCAAGAGGGTGGGCTTTGCTCAATGTATGGAATTAAGAAGGAACAATATCTTAAACGGCTGAAATGGCTCACTCGCTCTCTTAAGGTGATTAGAAAATTGACGGCCTGTGGTAATATATACTTTTCAGCTTTAGGAGACACTATTACCTGTGTGGGTCCGTCTCTTGCGGGATTAAGGACGTTCAGGAAGGTTGTGTTGGCCTGCATTGTTGAAGATCTGGATCCTGCATATCTTATAAGGAAAGAGTCAAAAAGGAAGCTGAAGGAGAGTATTAATTGTTTGCTTGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

634

Amino Acids

71.22

Weight (kDa)

9.11

Isoelectric Point (pI)

44.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000145)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08420
fragaria_vesca FvH4_1g11160 FvH4_2g08143 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36460 FvH4_3g36460 FvH4_3g45301 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_5g09160 FvH4_5g09161 FvH4_5g09380 FvH4_5g22900 FvH4_6g42520 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550
malus_domestica MD02G1015700.v1.1 MD02G1058900.v1.1 MD02G1059000.v1.1 MD03G1170900.v1.1 MD04G1231500.v1.1 MD13G1044300.v1.1 MD16G1045100.v1.1
prunus_persica Prupe.1G308200_v2.0.a1 Prupe.2G125300_v2.0.a1 Prupe.6G307800_v2.0.a1 Prupe.6G351700_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1
pyrus_communis pycom02g01420 pycom02g04810 pycom03g12790 pycom03g12800 pycom12g17840 pycom12g17850 pycom12g17860 pycom13g03890 pycom16g03970
rosa_chinensis RchiOBHm_Chr2g0090081 RchiOBHm_Chr3g0469061 RchiOBHm_Chr3g0469081 RchiOBHm_Chr4g0435531 RchiOBHm_Chr5g0014021 RchiOBHm_Chr5g0014031 RchiOBHm_Chr5g0014041 RchiOBHm_Chr7g0190151 RchiOBHm_Chr7g0190161 RchiOBHm_Chr7g0190171 RchiOBHm_Chr7g0210441
rosa_laevigata RLG00000003683 RLG00000003687 RLG00000003688 RLG00000004561 RLG00000004643 RLG00000016083 RLG00000021085 RLG00000024381 RLG00000032065 RLG00000032067 RLG00000032071 RLG00000032072 RLG00000032075
rosa_multiflora Rmu_co8284349.1_g000001 Rmu_co8324735.1_g000001 Rmu_co8355915.1_g000001 Rmu_co8388905.1_g000001 Rmu_sc0000302.1_g000041 Rmu_sc0000302.1_g000050 Rmu_sc0001940.1_g000034 Rmu_sc0003807.1_g000011 Rmu_sc0005803.1_g000001 Rmu_sc0005803.1_g000007 Rmu_sc0007139.1_g000007 Rmu_sc0007767.1_g000001 Rmu_sc0007767.1_g000003 Rmu_sc0007767.1_g000006 Rmu_sc0007933.1_g000005 Rmu_sc0008587.1_g000004 Rmu_sc0008968.1_g000004 Rmu_sc0018491.1_g000002 Rmu_sc0022420.1_g000001 Rmu_sc0027700.1_g000001 Rmu_sc0036218.1_g000001
rosa_roxburghii Rroxscaffold_1G00062590 Rroxscaffold_1G00062600 Rroxscaffold_1G00062620 Rroxscaffold_1G00062630 Rroxscaffold_1G00062640 Rroxscaffold_1G00062670 Rroxscaffold_1G00062680 Rroxscaffold_2G00091430 Rroxscaffold_2G00151410 Rroxscaffold_3G00245340 Rroxscaffold_3G00255390 Rroxscaffold_3G00264820 Rroxscaffold_3G00264830 Rroxscaffold_3G00265870 Rroxscaffold_5G00355140 Rroxscaffold_5G00376760 Rroxscaffold_6G00412230
rosa_rugosa Rorug02G0005200 Rorug02G0468300 Rorug02G0468300 Rorug02G0532400 Rorug03G0098900 Rorug03G0099000 Rorug03G0099400 Rorug04G0286000 Rorug05G0014400 Rorug05G0014500 Rorug05G0014600 Rorug05G0014600 Rorug05G0014600 Rorug05G0014800 Rorug05G0014900 Rorug05G0015000 Rorug05G0015100 Rorug05G0015100 Rorug05G0441300 Rorug06G0495300 Rorug06G0502600 Rorug06G0502700 Rorug07G0062300
rosa_samantha Rh2AG050900 Rh2BG049600 Rh2CG051800 Rh2CG234600 Rh2DG051100 Rh3BG171300 Rh3BG171800 Rh3CG336700 Rh3DG203600 Rh3DG203800 Rh4AG341600 Rh4AG341700 Rh4BG349900 Rh4CG364600 Rh4DG344200 Rh5AG108800 Rh5AG108900 Rh5AG109000 Rh5AG109100 Rh5BG105500 Rh5CG117300 Rh5CG117500 Rh5CG117600 Rh5DG104200 Rh5DG104400 Rh5DG104500 Rh5DG104600 Rh7BG102300 Rh7BG110600 Rh7BG110700 Rh7BG118900 Rh7CG103600 Rh7CG112800 Rh7CG113000 Rh7CG200300 Rh7CG271100 Rh7DG111300 Rh7DG111400 Rh7DG194400 Rh7DG261800 Rh7DG261900
rosa_wichuraiana Rw0G014550 Rw0G014580 Rw2G004580 Rw3G013980 Rw3G013990 Rw3G014000 Rw3G014020 Rw4G029810 Rw5G009500 Rw5G009510 Rw5G009520 Rw5G009530 Rw7G008640 Rw7G009350 Rw7G021680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1847
Acc16I TGCGCA 1 cut(s) 847
AccB1I GGYRCC 2 cut(s) 250, 961
AciI CCGC 6 cut(s) 37, 202, 740, 1060, 1140, 1778
AclWI GGATC 5 cut(s) 350, 722, 1281, 1826, 1839
AcoI YGGCCR 2 cut(s) 92, 1303
AcsI RAATTY 7 cut(s) 212, 356, 365, 497, 1046, 1380, 1592
AcuI CTGAAG 3 cut(s) 1353, 1491, 1892
AcyI GRCGYC 2 cut(s) 24, 618
AfaI GTAC 6 cut(s) 421, 474, 856, 1111, 1450, 1487
AfiI CCNNNNNNNGG 1 cut(s) 670
AflII CTTAAG 1 cut(s) 1691
AjnI CCWGG 1 cut(s) 175
AjuI GAANNNNNNNTTGG 2 cut(s) 1790, 1822
Alw26I GTCTC 5 cut(s) 383, 1073, 1288, 1740, 1776
AlwI GGATC 5 cut(s) 350, 722, 1281, 1826, 1839
Ama87I CYCGRG 3 cut(s) 122, 833, 1269
AoxI GGCC 4 cut(s) 92, 1303, 1713, 1809
ApeKI GCWGC 4 cut(s) 39, 628, 1328, 1585
ApoI RAATTY 7 cut(s) 212, 356, 365, 497, 1046, 1380, 1592
ArsI GACNNNNNNTTYG 2 cut(s) 1195, 1227
AseI ATTAAT 1 cut(s) 1884
AspLEI GCGC 1 cut(s) 848
AspS9I GGNCC 3 cut(s) 458, 1148, 1766
AsuC2I CCSGG 1 cut(s) 1490
AsuHPI GGTGA 4 cut(s) 165, 876, 1324, 1708
AvaI CYCGRG 3 cut(s) 122, 833, 1269
AvaII GGWCC 3 cut(s) 458, 1148, 1766
BaeGI GKGCMC 2 cut(s) 129, 443
BalI TGGCCA 1 cut(s) 1305
BamHI GGATCC 1 cut(s) 1831
BanI GGYRCC 2 cut(s) 250, 961
BauI CACGAG 2 cut(s) 29, 468
BbvI GCAGC 4 cut(s) 51, 640, 1340, 1597
BceAI ACGGC 3 cut(s) 295, 1682, 1728
BcgI CGANNNNNNTGC 2 cut(s) 1307, 1341
BciT130I CCWGG 1 cut(s) 177
BclI TGATCA 2 cut(s) 640, 1249
BcnI CCSGG 1 cut(s) 1490
BcoDI GTCTC 5 cut(s) 383, 1073, 1288, 1740, 1776
BfaI CTAG 1 cut(s) 1509
BfmI CTRYAG 2 cut(s) 183, 894
BfrI CTTAAG 1 cut(s) 1691
BglII AGATCT 3 cut(s) 406, 1096, 1825
BisI GCNGC 4 cut(s) 40, 629, 1329, 1586
BlsI GCNGC 4 cut(s) 41, 630, 1330, 1587
Bme1390I CCNGG 2 cut(s) 177, 1490
Bme18I GGWCC 3 cut(s) 458, 1148, 1766
BmeT110I CYCGRG 3 cut(s) 122, 833, 1269
BmgT120I GGNCC 3 cut(s) 458, 1148, 1766
BmiI GGNNCC 7 cut(s) 252, 459, 963, 1149, 1150, 1767, 1833
BmrFI CCNGG 2 cut(s) 177, 1490
BmsI GCATC 2 cut(s) 1483, 1522
BpmI CTGGAG 1 cut(s) 391
BpuEI CTTGAG 2 cut(s) 644, 716
BpuMI CCSGG 1 cut(s) 1490
BsaBI GATNNNNATC 1 cut(s) 1830
BsaHI GRCGYC 2 cut(s) 24, 618
BsaI GGTCTC 1 cut(s) 383
BsaJI CCNNGG 3 cut(s) 277, 304, 1038
Bsc4I CCNNNNNNNGG 1 cut(s) 670
Bse1I ACTGG 1 cut(s) 514
Bse8I GATNNNNATC 1 cut(s) 1830
BseBI CCWGG 1 cut(s) 177
BseDI CCNNGG 3 cut(s) 277, 304, 1038
BseGI GGATG 4 cut(s) 198, 1377, 1498, 1535
BseJI GATNNNNATC 1 cut(s) 1830
BseLI CCNNNNNNNGG 1 cut(s) 670
BseNI ACTGG 1 cut(s) 514
BseRI GAGGAG 1 cut(s) 619
BseSI GKGCMC 2 cut(s) 129, 443
BseXI GCAGC 4 cut(s) 51, 640, 1340, 1597
BseYI CCCAGC 2 cut(s) 477, 1167
BsgI GTGCAG 1 cut(s) 1347
Bsh1285I CGRYCG 1 cut(s) 99
BshFI GGCC 4 cut(s) 94, 1305, 1715, 1811
BshNI GGYRCC 2 cut(s) 250, 961
BsiEI CGRYCG 1 cut(s) 99
BsiHKCI CYCGRG 3 cut(s) 122, 833, 1269
BsiSI CCGG 5 cut(s) 21, 248, 737, 959, 1490
BslFI GGGAC 3 cut(s) 1134, 1197, 1529
BslI CCNNNNNNNGG 1 cut(s) 670
BsmAI GTCTC 5 cut(s) 383, 1073, 1288, 1740, 1776
BsmBI CGTCTC 1 cut(s) 1776
BsmFI GGGAC 3 cut(s) 1134, 1197, 1529
BsnI GGCC 4 cut(s) 94, 1305, 1715, 1811
Bso31I GGTCTC 1 cut(s) 383
BsoBI CYCGRG 3 cut(s) 122, 833, 1269
Bsp1286I GDGCHC 2 cut(s) 129, 443
BspACI CCGC 6 cut(s) 37, 202, 740, 1060, 1140, 1778
BspANI GGCC 4 cut(s) 94, 1305, 1715, 1811
BspLI GGNNCC 7 cut(s) 252, 459, 963, 1149, 1150, 1767, 1833
BspPI GGATC 5 cut(s) 350, 722, 1281, 1826, 1839
BspT107I GGYRCC 2 cut(s) 250, 961
BspTI CTTAAG 1 cut(s) 1691
BspTNI GGTCTC 1 cut(s) 383
BsrI ACTGG 1 cut(s) 514
BssECI CCNNGG 3 cut(s) 277, 304, 1038
BssNI GRCGYC 2 cut(s) 24, 618
BssSI CACGAG 2 cut(s) 29, 468
BssT1I CCWWGG 2 cut(s) 304, 1038
Bst2BI CACGAG 2 cut(s) 29, 468
Bst2UI CCWGG 1 cut(s) 177
Bst4CI ACNGT 7 cut(s) 160, 419, 859, 871, 1109, 1448, 1453
Bst6I CTCTTC 2 cut(s) 738, 1159
BstACI GRCGYC 2 cut(s) 24, 618
BstAFI CTTAAG 1 cut(s) 1691
BstAPI GCANNNNNTGC 2 cut(s) 1425, 1519
BstC8I GCNNGC 5 cut(s) 284, 995, 1583, 1813, 1896
BstDEI CTNAG 2 cut(s) 823, 874
BstDSI CCRYGG 1 cut(s) 277
BstF5I GGATG 4 cut(s) 198, 1377, 1498, 1535
BstHHI GCGC 1 cut(s) 848
BstMAI GTCTC 5 cut(s) 383, 1073, 1288, 1740, 1776
BstMCI CGRYCG 1 cut(s) 99
BstMWI GCNNNNNNNGC 9 cut(s) 21, 257, 687, 770, 968, 994, 1425, 1519, 1675
BstNI CCWGG 1 cut(s) 177
BstSCI CCNGG 2 cut(s) 175, 1488
BstSFI CTRYAG 2 cut(s) 183, 894
BstSLI GKGCMC 2 cut(s) 129, 443
BstV1I GCAGC 4 cut(s) 51, 640, 1340, 1597
BstX2I RGATCY 5 cut(s) 406, 1096, 1273, 1825, 1831
BstYI RGATCY 5 cut(s) 406, 1096, 1273, 1825, 1831
BsuRI GGCC 4 cut(s) 94, 1305, 1715, 1811
BtgI CCRYGG 1 cut(s) 277
BtsCI GGATG 4 cut(s) 198, 1377, 1498, 1535
BtsI GCAGTG 1 cut(s) 983
BtsIMutI CAGTG 6 cut(s) 415, 983, 1105, 1234, 1430, 1571
Cac8I GCNNGC 5 cut(s) 284, 995, 1583, 1813, 1896
CfoI GCGC 1 cut(s) 848
Cfr13I GGNCC 3 cut(s) 458, 1148, 1766
CseI GACGC 3 cut(s) 13, 607, 679
Csp6I GTAC 6 cut(s) 420, 473, 855, 1110, 1449, 1486
CviAII CATG 8 cut(s) 290, 530, 571, 761, 989, 1001, 1220, 1589
CviQI GTAC 6 cut(s) 420, 473, 855, 1110, 1449, 1486
DdeI CTNAG 2 cut(s) 823, 874
DraI TTTAAA 3 cut(s) 393, 546, 1083
EaeI YGGCCR 2 cut(s) 92, 1303
Eam1104I CTCTTC 2 cut(s) 738, 1159
EarI CTCTTC 2 cut(s) 738, 1159
EciI GGCGGA 1 cut(s) 755
Eco130I CCWWGG 2 cut(s) 304, 1038
Eco31I GGTCTC 1 cut(s) 383
Eco32I GATATC 1 cut(s) 907
Eco47I GGWCC 3 cut(s) 458, 1148, 1766
Eco57I CTGAAG 3 cut(s) 1353, 1491, 1892
Eco88I CYCGRG 3 cut(s) 122, 833, 1269
EcoO109I RGGNCCY 2 cut(s) 458, 1148
EcoRI GAATTC 2 cut(s) 356, 1592
EcoRII CCWGG 1 cut(s) 175
EcoRV GATATC 1 cut(s) 907
EcoT14I CCWWGG 2 cut(s) 304, 1038
EcoT22I ATGCAT 1 cut(s) 67
ErhI CCWWGG 2 cut(s) 304, 1038
Esp3I CGTCTC 1 cut(s) 1776
FaeI CATG 8 cut(s) 293, 533, 574, 764, 992, 1004, 1223, 1592
FaqI GGGAC 3 cut(s) 1134, 1197, 1529
FatI CATG 8 cut(s) 289, 529, 570, 760, 988, 1000, 1219, 1588
FauI CCCGC 1 cut(s) 1771
FauNDI CATATG 1 cut(s) 1238
FbaI TGATCA 2 cut(s) 640, 1249
Fnu4HI GCNGC 4 cut(s) 40, 629, 1329, 1586
FokI GGATG 4 cut(s) 185, 1384, 1505, 1522
Fsp4HI GCNGC 4 cut(s) 40, 629, 1329, 1586
FspBI CTAG 1 cut(s) 1509
FspI TGCGCA 1 cut(s) 847
GlaI GCGC 1 cut(s) 847
GluI GCNGC 4 cut(s) 40, 629, 1329, 1586
GsaI CCCAGC 2 cut(s) 481, 1171
GsuI CTGGAG 1 cut(s) 391
HaeIII GGCC 4 cut(s) 94, 1305, 1715, 1811
HapII CCGG 5 cut(s) 21, 248, 737, 959, 1490
HgaI GACGC 3 cut(s) 13, 607, 679
HhaI GCGC 1 cut(s) 848
Hin1I GRCGYC 2 cut(s) 24, 618
Hin1II CATG 8 cut(s) 293, 533, 574, 764, 992, 1004, 1223, 1592
Hin6I GCGC 1 cut(s) 846
HinP1I GCGC 1 cut(s) 846
HincII GTYRAC 1 cut(s) 724
HindII GTYRAC 1 cut(s) 724
HindIII AAGCTT 4 cut(s) 87, 798, 935, 1013
HpaI GTTAAC 1 cut(s) 724
HpaII CCGG 5 cut(s) 21, 248, 737, 959, 1490
HphI GGTGA 4 cut(s) 165, 876, 1324, 1708
Hpy166II GTNNAC 3 cut(s) 34, 724, 1315
Hpy188I TCNGA 7 cut(s) 54, 411, 432, 640, 1032, 1101, 1440
Hpy8I GTNNAC 3 cut(s) 34, 724, 1315
HpyAV CCTTC 6 cut(s) 471, 1370, 1498, 1642, 1792, 1867
HpyCH4III ACNGT 7 cut(s) 160, 419, 859, 871, 1109, 1448, 1453
HpyCH4IV ACGT 1 cut(s) 1790
HpyF10VI GCNNNNNNNGC 9 cut(s) 21, 257, 687, 770, 968, 994, 1425, 1519, 1675
HpyF3I CTNAG 2 cut(s) 823, 874
HpySE526I ACGT 1 cut(s) 1790
Hsp92I GRCGYC 2 cut(s) 24, 618
Hsp92II CATG 8 cut(s) 293, 533, 574, 764, 992, 1004, 1223, 1592
HspAI GCGC 1 cut(s) 846
KflI GGGWCCC 1 cut(s) 1148
Ksp22I TGATCA 2 cut(s) 640, 1249
KspAI GTTAAC 1 cut(s) 724
Lsp1109I GCAGC 4 cut(s) 51, 640, 1340, 1597
LweI GCATC 2 cut(s) 1483, 1522
MaeI CTAG 1 cut(s) 1509
MaeII ACGT 1 cut(s) 1790
MaeIII GTNAC 3 cut(s) 171, 1336, 1453
MboII GAAGA 8 cut(s) 128, 416, 725, 839, 1106, 1146, 1331, 1835
MflI RGATCY 5 cut(s) 406, 1096, 1273, 1825, 1831
MhlI GDGCHC 2 cut(s) 129, 443
MlsI TGGCCA 1 cut(s) 1305
MluNI TGGCCA 1 cut(s) 1305
MlyI GAGTC 7 cut(s) 179, 232, 943, 1219, 1406, 1450, 1865
MmeI TCCRAC 1 cut(s) 93
Mox20I TGGCCA 1 cut(s) 1305
Mph1103I ATGCAT 1 cut(s) 67
MscI TGGCCA 1 cut(s) 1305
MslI CAYNNNNRTG 1 cut(s) 1601
Msp20I TGGCCA 1 cut(s) 1305
MspA1I CMGCKG 2 cut(s) 1142, 1331
MspCI CTTAAG 1 cut(s) 1691
MspI CCGG 5 cut(s) 21, 248, 737, 959, 1490
MspR9I CCNGG 2 cut(s) 177, 1490
MvaI CCWGG 1 cut(s) 177
MwoI GCNNNNNNNGC 9 cut(s) 21, 257, 687, 770, 968, 994, 1425, 1519, 1675
NciI CCSGG 1 cut(s) 1490
NdeI CATATG 1 cut(s) 1238
NlaIII CATG 8 cut(s) 293, 533, 574, 764, 992, 1004, 1223, 1592
NlaIV GGNNCC 7 cut(s) 252, 459, 963, 1149, 1150, 1767, 1833
NmuCI GTSAC 3 cut(s) 171, 1336, 1453
NsbI TGCGCA 1 cut(s) 847
NsiI ATGCAT 1 cut(s) 67
PcsI WCGNNNNNNNCGW 2 cut(s) 723, 863
PfeI GAWTC 4 cut(s) 152, 707, 815, 1435
PflFI GACNNNGTC 1 cut(s) 1342
PkrI GCNGC 4 cut(s) 41, 630, 1330, 1587
Ple19I CGATCG 1 cut(s) 99
PleI GAGTC 7 cut(s) 178, 232, 943, 1218, 1405, 1450, 1864
PpsI GAGTC 7 cut(s) 178, 232, 943, 1218, 1405, 1450, 1864
PpuMI RGGWCCY 2 cut(s) 458, 1148
PshBI ATTAAT 1 cut(s) 1884
PsiI TTATAA 1 cut(s) 1847
Psp5II RGGWCCY 2 cut(s) 458, 1148
Psp6I CCWGG 1 cut(s) 175
PspFI CCCAGC 2 cut(s) 477, 1167
PspGI CCWGG 1 cut(s) 175
PspN4I GGNNCC 7 cut(s) 252, 459, 963, 1149, 1150, 1767, 1833
PspPI GGNCC 3 cut(s) 458, 1148, 1766
PspPPI RGGWCCY 2 cut(s) 458, 1148
PsuI RGATCY 5 cut(s) 406, 1096, 1273, 1825, 1831
PsyI GACNNNGTC 1 cut(s) 1342
PvuI CGATCG 1 cut(s) 99
PvuII CAGCTG 1 cut(s) 1331
RsaI GTAC 6 cut(s) 421, 474, 856, 1111, 1450, 1487
RsaNI GTAC 6 cut(s) 420, 473, 855, 1110, 1449, 1486
RseI CAYNNNNRTG 1 cut(s) 1601
SatI GCNGC 4 cut(s) 40, 629, 1329, 1586
Sau96I GGNCC 3 cut(s) 458, 1148, 1766
SchI GAGTC 7 cut(s) 179, 232, 943, 1219, 1406, 1450, 1865
ScrFI CCNGG 2 cut(s) 177, 1490
SduI GDGCHC 2 cut(s) 129, 443
SfaNI GCATC 2 cut(s) 1483, 1522
SfcI CTRYAG 2 cut(s) 183, 894
SinI GGWCC 3 cut(s) 458, 1148, 1766
SmiMI CAYNNNNRTG 1 cut(s) 1601
SmlI CTYRAG 3 cut(s) 623, 695, 1691
SmoI CTYRAG 3 cut(s) 623, 695, 1691
SsiI CCGC 6 cut(s) 37, 202, 740, 1060, 1140, 1778
SspI AATATT 1 cut(s) 1300
SspMI CTAG 1 cut(s) 1509
StyD4I CCNGG 2 cut(s) 175, 1488
StyI CCWWGG 2 cut(s) 304, 1038
TaaI ACNGT 7 cut(s) 160, 419, 859, 871, 1109, 1448, 1453
TaiI ACGT 1 cut(s) 1793
TaqI TCGA 6 cut(s) 137, 222, 360, 813, 866, 1563
TatI WGTACW 2 cut(s) 419, 1109
TfiI GAWTC 4 cut(s) 152, 707, 815, 1435
TscAI CASTG 6 cut(s) 422, 990, 1112, 1234, 1437, 1578
TseFI GTSAC 3 cut(s) 171, 1336, 1453
TseI GCWGC 4 cut(s) 39, 628, 1328, 1585
Tsp45I GTSAC 3 cut(s) 171, 1336, 1453
TspDTI ATGAA 4 cut(s) 810, 1225, 1585, 1605
TspGWI ACGGA 2 cut(s) 38, 1758
TspRI CASTG 6 cut(s) 422, 990, 1112, 1234, 1437, 1578
Tth111I GACNNNGTC 1 cut(s) 1342
Vha464I CTTAAG 1 cut(s) 1691
VpaK11BI GGWCC 3 cut(s) 458, 1148, 1766
VspI ATTAAT 1 cut(s) 1884
XapI RAATTY 7 cut(s) 212, 356, 365, 497, 1046, 1380, 1592
XcmI CCANNNNNNNNNTGG 2 cut(s) 163, 474
XspI CTAG 1 cut(s) 1509
Zsp2I ATGCAT 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.