Rh2CG051800

rRNA processing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000145
Physical Location & Seq
Reverse (-)
4073569 .. 4074938
1370 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG051800.1

Sequence Viewer

Length: 1284 bp
ATGGAGAACCAGAACATCGAGTCCATGGAGATGGATAAGTCCGGCCCTTCTTCTTCGAACGACGAGACCTCTTTCTCTGCGTTCTTCTCTGAAAAACGACAACTAAAGTTGCAAGACGTCTGGCCGGAGCTGGAGTCGTCTTTAGATGCCTATGGCATTTCATGCGCAATTAATCTTCCCCAGCGCTCAGTAACAATCTCAAGGACCCCAACGACCAAGGGCCGAAACTATTACGACAAGGCCAAGAGTGTCGTCGAGCTTCTTGCAACAACTCAAGTGCCACCGCATCTGGCACTGGAAGTATTGAACGGAAATTGGAGATTTCATACTCTAATTAAGACTGGGAATCAAGAAGGTGGGTTCTGCTCCAAGTTCGGCATCAGCCCGGACCAGTTTGCTAAACGAAGGGACTGGCTTGCCGGATCCCTGGAGGCAATTTCGGCACTGACGCTTTGTCATCTTTATGTTAATGAAAACACTGCTGCTGCGGTGGGTTCGGCTGCTTCGGTGTTAGAGTTTAGGAGGATTGTGGAAAACTGCATTGTTAGTGATGTGAATCCGGCAGAGTCTAACAACAAGATTAAAAAGTTTTTGAGTTATAAAAATCACGTGCTGCAGAAACGTGGGGTGGATTACACGGCAGTATTGGAGAAGTCTGGCATGAGTGAAGTGACATCTTTTGGTGCGTACGTCGCTAAAGGTCTTAGTAGGAATAAAGAGGTGGACCAAGCCTGGCCTTTTGTGGAGTCGTTTTTAGAACAGTATGGCATTTCATGCACATTGCATAGGGTTCTTCGTTCCATGACATTTTCGACTACCAGAGTGACCAAGGATCCAGATGTTATGGACAGTGTTGGTGCTCTTCTTGGAGTTTTGGGAAGTACTAGTGTTCCGGGGTCGAAGGTGATACAGATATTGGACAGCCGGCTGCAGTATGAATTCATCAAGACCGGGTTTGAAAAGGGTGGGCTCTGCTCGAAATTTGATGGGATCGAGAAGGAGCTTGCTAAGAACAAGCAAAGATTGAAGCGCAACGCAAAGAACCTTGGAGACTTGTTGGTATGTGATGTGTATATTGACAGAAGCAGTGTCGTTGTAGTGGGGAGTTGTGCGGCAGGGTTGAAGGAAATGAGGTCAATTGTGGAACGATGTCTGGTTAAAAATGAAGACCCTGCAACAGCGGTGAGGAGGCTAAGATCGTGTAATAAGAAACAGGGTAGTTTGAGATTATCTGATGAGAAGCAGGTCAGTTTGATGAAGAAGCTTGAGGGTCTGTGTCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

427

Amino Acids

47.28

Weight (kDa)

8.89

Isoelectric Point (pI)

45.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_KRR1_2nd PF21800 130 - 197 4.4e-09 KRR1 small subunit processome component, second KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000145)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08420
fragaria_vesca FvH4_1g11160 FvH4_2g08143 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36460 FvH4_3g36460 FvH4_3g45301 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_5g09160 FvH4_5g09161 FvH4_5g09380 FvH4_5g22900 FvH4_6g42520 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550
malus_domestica MD02G1015700.v1.1 MD02G1058900.v1.1 MD02G1059000.v1.1 MD03G1170900.v1.1 MD04G1231500.v1.1 MD13G1044300.v1.1 MD16G1045100.v1.1
prunus_persica Prupe.1G308200_v2.0.a1 Prupe.2G125300_v2.0.a1 Prupe.6G307800_v2.0.a1 Prupe.6G351700_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1
pyrus_communis pycom02g01420 pycom02g04810 pycom03g12790 pycom03g12800 pycom12g17840 pycom12g17850 pycom12g17860 pycom13g03890 pycom16g03970
rosa_chinensis RchiOBHm_Chr2g0090081 RchiOBHm_Chr3g0469061 RchiOBHm_Chr3g0469081 RchiOBHm_Chr4g0435531 RchiOBHm_Chr5g0014021 RchiOBHm_Chr5g0014031 RchiOBHm_Chr5g0014041 RchiOBHm_Chr7g0190151 RchiOBHm_Chr7g0190161 RchiOBHm_Chr7g0190171 RchiOBHm_Chr7g0210441
rosa_laevigata RLG00000003683 RLG00000003687 RLG00000003688 RLG00000004561 RLG00000004643 RLG00000016083 RLG00000021085 RLG00000024381 RLG00000032065 RLG00000032067 RLG00000032071 RLG00000032072 RLG00000032075
rosa_multiflora Rmu_co8284349.1_g000001 Rmu_co8324735.1_g000001 Rmu_co8355915.1_g000001 Rmu_co8388905.1_g000001 Rmu_sc0000302.1_g000041 Rmu_sc0000302.1_g000050 Rmu_sc0001940.1_g000034 Rmu_sc0003807.1_g000011 Rmu_sc0005803.1_g000001 Rmu_sc0005803.1_g000007 Rmu_sc0007139.1_g000007 Rmu_sc0007767.1_g000001 Rmu_sc0007767.1_g000003 Rmu_sc0007767.1_g000006 Rmu_sc0007933.1_g000005 Rmu_sc0008587.1_g000004 Rmu_sc0008968.1_g000004 Rmu_sc0018491.1_g000002 Rmu_sc0022420.1_g000001 Rmu_sc0027700.1_g000001 Rmu_sc0036218.1_g000001
rosa_roxburghii Rroxscaffold_1G00062590 Rroxscaffold_1G00062600 Rroxscaffold_1G00062620 Rroxscaffold_1G00062630 Rroxscaffold_1G00062640 Rroxscaffold_1G00062670 Rroxscaffold_1G00062680 Rroxscaffold_2G00091430 Rroxscaffold_2G00151410 Rroxscaffold_3G00245340 Rroxscaffold_3G00255390 Rroxscaffold_3G00264820 Rroxscaffold_3G00264830 Rroxscaffold_3G00265870 Rroxscaffold_5G00355140 Rroxscaffold_5G00376760 Rroxscaffold_6G00412230
rosa_rugosa Rorug02G0005200 Rorug02G0468300 Rorug02G0468300 Rorug02G0532400 Rorug03G0098900 Rorug03G0099000 Rorug03G0099400 Rorug04G0286000 Rorug05G0014400 Rorug05G0014500 Rorug05G0014600 Rorug05G0014600 Rorug05G0014600 Rorug05G0014800 Rorug05G0014900 Rorug05G0015000 Rorug05G0015100 Rorug05G0015100 Rorug05G0441300 Rorug06G0495300 Rorug06G0502600 Rorug06G0502700 Rorug07G0062300
rosa_samantha Rh2AG050900 Rh2BG049600 Rh2CG051800 Rh2CG234600 Rh2DG051100 Rh3BG171300 Rh3BG171800 Rh3CG336700 Rh3DG203600 Rh3DG203800 Rh4AG341600 Rh4AG341700 Rh4BG349900 Rh4CG364600 Rh4DG344200 Rh5AG108800 Rh5AG108900 Rh5AG109000 Rh5AG109100 Rh5BG105500 Rh5CG117300 Rh5CG117500 Rh5CG117600 Rh5DG104200 Rh5DG104400 Rh5DG104500 Rh5DG104600 Rh7BG102300 Rh7BG110600 Rh7BG110700 Rh7BG118900 Rh7CG103600 Rh7CG112800 Rh7CG113000 Rh7CG200300 Rh7CG271100 Rh7DG111300 Rh7DG111400 Rh7DG194400 Rh7DG261800 Rh7DG261900
rosa_wichuraiana Rw0G014550 Rw0G014580 Rw2G004580 Rw3G013980 Rw3G013990 Rw3G014000 Rw3G014020 Rw4G029810 Rw5G009500 Rw5G009510 Rw5G009520 Rw5G009530 Rw7G008640 Rw7G009350 Rw7G021680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 600
AatII GACGTC 1 cut(s) 120
Acc16I TGCGCA 1 cut(s) 166
Acc36I ACCTGC 1 cut(s) 1234
AciI CCGC 4 cut(s) 284, 488, 1112, 1181
AclWI GGATC 5 cut(s) 417, 430, 827, 840, 998
AcoI YGGCCR 1 cut(s) 122
AcsI RAATTY 2 cut(s) 938, 980
AcvI CACGTG 1 cut(s) 610
AcyI GRCGYC 1 cut(s) 117
AfaI GTAC 2 cut(s) 689, 883
AfeI AGCGCT 1 cut(s) 185
AgsI TTSAA 4 cut(s) 307, 959, 1027, 1123
AhdI GACNNNNNGTC 1 cut(s) 453
AhlI ACTAGT 1 cut(s) 884
AjnI CCWGG 2 cut(s) 426, 731
AloI GAACNNNNNNTCC 1 cut(s) 37
AluBI AGCT 4 cut(s) 130, 259, 1003, 1264
AluI AGCT 4 cut(s) 130, 259, 1003, 1264
Alw21I GWGCWC 1 cut(s) 862
Alw26I GTCTC 2 cut(s) 59, 1044
AlwI GGATC 5 cut(s) 417, 430, 827, 840, 998
Aor51HI AGCGCT 1 cut(s) 185
AoxI GGCC 5 cut(s) 43, 122, 220, 240, 734
ApeKI GCWGC 5 cut(s) 482, 485, 500, 613, 928
ApoI RAATTY 2 cut(s) 938, 980
AseI ATTAAT 1 cut(s) 171
AspLEI GCGC 3 cut(s) 167, 186, 1032
AspS9I GGNCC 5 cut(s) 44, 204, 220, 388, 724
AsuC2I CCSGG 3 cut(s) 386, 894, 952
AsuHPI GGTGA 2 cut(s) 916, 1195
AsuII TTCGAA 1 cut(s) 56
AvaII GGWCC 3 cut(s) 204, 388, 724
BamHI GGATCC 2 cut(s) 422, 832
BanII GRGCYC 1 cut(s) 972
BbrPI CACGTG 1 cut(s) 610
BbsI GAAGAC 1 cut(s) 1173
Bbv12I GWGCWC 1 cut(s) 862
BbvI GCAGC 5 cut(s) 469, 472, 487, 600, 915
BccI CCATC 2 cut(s) 25, 980
BceAI ACGGC 1 cut(s) 654
BcgI CGANNNNNNTGC 2 cut(s) 245, 279
BciT130I CCWGG 2 cut(s) 428, 733
BcnI CCSGG 3 cut(s) 386, 894, 952
BcoDI GTCTC 2 cut(s) 59, 1044
BcuI ACTAGT 1 cut(s) 884
BfaI CTAG 1 cut(s) 885
BfmI CTRYAG 2 cut(s) 614, 929
BfoI RGCGCY 1 cut(s) 187
BfuAI ACCTGC 1 cut(s) 1234
BisI GCNGC 6 cut(s) 483, 486, 501, 614, 929, 1113
BlsI GCNGC 6 cut(s) 484, 487, 502, 615, 930, 1114
BmcAI AGTACT 1 cut(s) 883
Bme1390I CCNGG 5 cut(s) 386, 428, 733, 894, 952
Bme18I GGWCC 3 cut(s) 204, 388, 724
BmeRI GACNNNNNGTC 1 cut(s) 453
BmgT120I GGNCC 5 cut(s) 44, 204, 220, 388, 724
BmiI GGNNCC 3 cut(s) 206, 424, 834
BmrFI CCNGG 5 cut(s) 386, 428, 733, 894, 952
BmrI ACTGGG 1 cut(s) 351
BmsI GCATC 3 cut(s) 136, 295, 387
BmuI ACTGGG 1 cut(s) 351
BpiI GAAGAC 1 cut(s) 1173
BpmI CTGGAG 2 cut(s) 152, 449
Bpu14I TTCGAA 1 cut(s) 56
BpuEI CTTGAG 2 cut(s) 184, 258
BpuMI CCSGG 3 cut(s) 386, 894, 952
BsaAI YACGTR 1 cut(s) 610
BsaBI GATNNNNATC 1 cut(s) 555
BsaHI GRCGYC 1 cut(s) 117
BsaI GGTCTC 1 cut(s) 59
BsaJI CCNNGG 6 cut(s) 24, 216, 426, 828, 893, 1045
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bse118I RCCGGY 1 cut(s) 924
Bse1I ACTGG 4 cut(s) 300, 346, 391, 416
Bse3DI GCAATG 1 cut(s) 779
Bse8I GATNNNNATC 1 cut(s) 555
BseBI CCWGG 2 cut(s) 428, 733
BseDI CCNNGG 6 cut(s) 24, 216, 426, 828, 893, 1045
BseJI GATNNNNATC 1 cut(s) 555
BseMI GCAATG 1 cut(s) 779
BseMII CTCAG 1 cut(s) 201
BseNI ACTGG 4 cut(s) 300, 346, 391, 416
BseRI GAGGAG 1 cut(s) 1201
BseXI GCAGC 5 cut(s) 469, 472, 487, 600, 915
BseYI CCCAGC 1 cut(s) 180
BshFI GGCC 5 cut(s) 45, 124, 222, 242, 736
BsiHKAI GWGCWC 1 cut(s) 862
BsiSI CCGG 8 cut(s) 42, 125, 386, 420, 560, 893, 925, 951
BsiWI CGTACG 1 cut(s) 687
BslFI GGGAC 1 cut(s) 422
BsmAI GTCTC 2 cut(s) 59, 1044
BsmFI GGGAC 1 cut(s) 422
BsnI GGCC 5 cut(s) 45, 124, 222, 242, 736
Bso31I GGTCTC 1 cut(s) 59
Bsp119I TTCGAA 1 cut(s) 56
Bsp1286I GDGCHC 2 cut(s) 862, 972
Bsp143I GATC 4 cut(s) 422, 832, 990, 1196
Bsp19I CCATGG 1 cut(s) 24
BspACI CCGC 4 cut(s) 284, 488, 1112, 1181
BspANI GGCC 5 cut(s) 45, 124, 222, 242, 736
BspCNI CTCAG 1 cut(s) 200
BspLI GGNNCC 3 cut(s) 206, 424, 834
BspMAI CTGCAG 2 cut(s) 618, 933
BspMI ACCTGC 1 cut(s) 1234
BspPI GGATC 5 cut(s) 417, 430, 827, 840, 998
BspQI GCTCTTC 1 cut(s) 867
BspT104I TTCGAA 1 cut(s) 56
BspTNI GGTCTC 1 cut(s) 59
BsrDI GCAATG 1 cut(s) 779
BsrFI RCCGGY 1 cut(s) 924
BsrI ACTGG 4 cut(s) 300, 346, 391, 416
BssAI RCCGGY 1 cut(s) 924
BssECI CCNNGG 6 cut(s) 24, 216, 426, 828, 893, 1045
BssMI GATC 4 cut(s) 422, 832, 990, 1196
BssNI GRCGYC 1 cut(s) 117
BssT1I CCWWGG 4 cut(s) 24, 216, 828, 1045
Bst2UI CCWGG 2 cut(s) 428, 733
Bst4CI ACNGT 2 cut(s) 762, 851
Bst6I CTCTTC 1 cut(s) 867
BstACI GRCGYC 1 cut(s) 117
BstAPI GCANNNNNTGC 2 cut(s) 162, 774
BstBAI YACGTR 1 cut(s) 610
BstBI TTCGAA 1 cut(s) 56
BstC8I GCNNGC 3 cut(s) 417, 926, 1005
BstDEI CTNAG 4 cut(s) 187, 704, 1008, 1193
BstDSI CCRYGG 1 cut(s) 24
BstH2I RGCGCY 1 cut(s) 187
BstHHI GCGC 3 cut(s) 167, 186, 1032
BstKTI GATC 4 cut(s) 425, 835, 993, 1199
BstMAI GTCTC 2 cut(s) 59, 1044
BstMBI GATC 4 cut(s) 422, 832, 990, 1196
BstMWI GCNNNNNNNGC 4 cut(s) 162, 440, 692, 774
BstNI CCWGG 2 cut(s) 428, 733
BstSCI CCNGG 5 cut(s) 384, 426, 731, 892, 950
BstSFI CTRYAG 2 cut(s) 614, 929
BstV1I GCAGC 5 cut(s) 469, 472, 487, 600, 915
BstV2I GAAGAC 1 cut(s) 1173
BstX2I RGATCY 2 cut(s) 422, 832
BstXI CCANNNNNNTGG 1 cut(s) 31
BstYI RGATCY 2 cut(s) 422, 832
BsuRI GGCC 5 cut(s) 45, 124, 222, 242, 736
BtgI CCRYGG 1 cut(s) 24
BtsI GCAGTG 2 cut(s) 477, 1093
BtsIMutI CAGTG 5 cut(s) 293, 443, 477, 856, 1093
BveI ACCTGC 1 cut(s) 1234
Cac8I GCNNGC 3 cut(s) 417, 926, 1005
CfoI GCGC 3 cut(s) 167, 186, 1032
Cfr10I RCCGGY 1 cut(s) 924
Cfr13I GGNCC 5 cut(s) 44, 204, 220, 388, 724
CseI GACGC 1 cut(s) 457
Csp6I GTAC 2 cut(s) 688, 882
CviAII CATG 5 cut(s) 25, 162, 661, 774, 802
CviQI GTAC 2 cut(s) 688, 882
DdeI CTNAG 4 cut(s) 187, 704, 1008, 1193
DpnI GATC 4 cut(s) 424, 834, 992, 1198
DpnII GATC 4 cut(s) 422, 832, 990, 1196
DriI GACNNNNNGTC 1 cut(s) 453
EaeI YGGCCR 1 cut(s) 122
Eam1104I CTCTTC 1 cut(s) 867
Eam1105I GACNNNNNGTC 1 cut(s) 453
EarI CTCTTC 1 cut(s) 867
Eco130I CCWWGG 4 cut(s) 24, 216, 828, 1045
Eco24I GRGCYC 1 cut(s) 972
Eco31I GGTCTC 1 cut(s) 59
Eco47I GGWCC 3 cut(s) 204, 388, 724
Eco47III AGCGCT 1 cut(s) 185
Eco72I CACGTG 1 cut(s) 610
EcoO109I RGGNCCY 1 cut(s) 204
EcoRI GAATTC 1 cut(s) 938
EcoRII CCWGG 2 cut(s) 426, 731
EcoT14I CCWWGG 4 cut(s) 24, 216, 828, 1045
EcoT38I GRGCYC 1 cut(s) 972
ErhI CCWWGG 4 cut(s) 24, 216, 828, 1045
FaeI CATG 5 cut(s) 28, 165, 664, 777, 805
FaqI GGGAC 1 cut(s) 422
FatI CATG 5 cut(s) 24, 161, 660, 773, 801
Fnu4HI GCNGC 6 cut(s) 483, 486, 501, 614, 929, 1113
FriOI GRGCYC 1 cut(s) 972
Fsp4HI GCNGC 6 cut(s) 483, 486, 501, 614, 929, 1113
FspBI CTAG 1 cut(s) 885
FspI TGCGCA 1 cut(s) 166
GlaI GCGC 3 cut(s) 166, 185, 1031
GluI GCNGC 6 cut(s) 483, 486, 501, 614, 929, 1113
GsaI CCCAGC 1 cut(s) 184
GsuI CTGGAG 2 cut(s) 152, 449
HaeII RGCGCY 1 cut(s) 187
HaeIII GGCC 5 cut(s) 45, 124, 222, 242, 736
HapII CCGG 8 cut(s) 42, 125, 386, 420, 560, 893, 925, 951
HgaI GACGC 1 cut(s) 457
HhaI GCGC 3 cut(s) 167, 186, 1032
Hin1I GRCGYC 1 cut(s) 117
Hin1II CATG 5 cut(s) 28, 165, 664, 777, 805
Hin6I GCGC 3 cut(s) 165, 184, 1030
HinP1I GCGC 3 cut(s) 165, 184, 1030
HindIII AAGCTT 1 cut(s) 1262
HinfI GANTC 6 cut(s) 20, 134, 346, 556, 566, 746
HpaII CCGG 8 cut(s) 42, 125, 386, 420, 560, 893, 925, 951
HphI GGTGA 2 cut(s) 916, 1195
Hpy166II GTNNAC 1 cut(s) 724
Hpy188I TCNGA 2 cut(s) 91, 1234
Hpy188III TCNNGA 4 cut(s) 350, 836, 946, 994
Hpy8I GTNNAC 1 cut(s) 724
Hpy99I CGWCG 3 cut(s) 65, 257, 695
HpyAV CCTTC 6 cut(s) 57, 347, 399, 895, 991, 1117
HpyCH4III ACNGT 2 cut(s) 762, 851
HpyCH4IV ACGT 4 cut(s) 117, 609, 622, 690
HpyCH4V TGCA 8 cut(s) 112, 266, 540, 616, 777, 784, 931, 1175
HpyF10VI GCNNNNNNNGC 4 cut(s) 162, 440, 692, 774
HpyF3I CTNAG 4 cut(s) 187, 704, 1008, 1193
HpySE526I ACGT 4 cut(s) 117, 609, 622, 690
Hsp92I GRCGYC 1 cut(s) 117
Hsp92II CATG 5 cut(s) 28, 165, 664, 777, 805
HspAI GCGC 3 cut(s) 165, 184, 1030
KroI GCCGGC 1 cut(s) 924
KroNI GCCGGC 1 cut(s) 926
Kzo9I GATC 4 cut(s) 422, 832, 990, 1196
LguI GCTCTTC 1 cut(s) 867
LmnI GCTCC 3 cut(s) 127, 371, 1000
Lsp1109I GCAGC 5 cut(s) 469, 472, 487, 600, 915
LweI GCATC 3 cut(s) 136, 295, 387
MaeI CTAG 1 cut(s) 885
MaeII ACGT 4 cut(s) 117, 609, 622, 690
MaeIII GTNAC 3 cut(s) 190, 670, 823
MalI GATC 4 cut(s) 424, 834, 992, 1198
MboI GATC 4 cut(s) 422, 832, 990, 1196
MboII GAAGA 8 cut(s) 42, 45, 76, 167, 785, 854, 1178, 1270
MfeI CAATTG 1 cut(s) 1137
MflI RGATCY 2 cut(s) 422, 832
MhlI GDGCHC 2 cut(s) 862, 972
MluCI AATT 7 cut(s) 168, 313, 333, 435, 938, 980, 1137
MlyI GAGTC 4 cut(s) 29, 143, 575, 755
MnlI CCTC 8 cut(s) 79, 424, 516, 712, 1125, 1179, 1182, 1261
MroNI GCCGGC 1 cut(s) 924
MseI TTAA 5 cut(s) 171, 336, 468, 582, 1158
MslI CAYNNNNRTG 2 cut(s) 29, 462
MspA1I CMGCKG 1 cut(s) 1181
MspI CCGG 8 cut(s) 42, 125, 386, 420, 560, 893, 925, 951
MspR9I CCNGG 5 cut(s) 386, 428, 733, 894, 952
MunI CAATTG 1 cut(s) 1137
MvaI CCWGG 2 cut(s) 428, 733
MwoI GCNNNNNNNGC 4 cut(s) 162, 440, 692, 774
NaeI GCCGGC 1 cut(s) 926
NciI CCSGG 3 cut(s) 386, 894, 952
NcoI CCATGG 1 cut(s) 24
NdeII GATC 4 cut(s) 422, 832, 990, 1196
NgoMIV GCCGGC 1 cut(s) 924
NlaIII CATG 5 cut(s) 28, 165, 664, 777, 805
NlaIV GGNNCC 3 cut(s) 206, 424, 834
NmuCI GTSAC 2 cut(s) 670, 823
NsbI TGCGCA 1 cut(s) 166
NspV TTCGAA 1 cut(s) 56
PciSI GCTCTTC 1 cut(s) 867
PdiI GCCGGC 1 cut(s) 926
PfeI GAWTC 2 cut(s) 346, 556
Pfl23II CGTACG 1 cut(s) 687
PkrI GCNGC 6 cut(s) 484, 487, 502, 615, 930, 1114
PleI GAGTC 4 cut(s) 28, 142, 574, 754
PmaCI CACGTG 1 cut(s) 610
PmlI CACGTG 1 cut(s) 610
PpsI GAGTC 4 cut(s) 28, 142, 574, 754
Ppu21I YACGTR 1 cut(s) 610
PpuMI RGGWCCY 1 cut(s) 204
PshBI ATTAAT 1 cut(s) 171
PsiI TTATAA 1 cut(s) 600
Psp5II RGGWCCY 1 cut(s) 204
Psp6I CCWGG 2 cut(s) 426, 731
PspCI CACGTG 1 cut(s) 610
PspFI CCCAGC 1 cut(s) 180
PspGI CCWGG 2 cut(s) 426, 731
PspLI CGTACG 1 cut(s) 687
PspN4I GGNNCC 3 cut(s) 206, 424, 834
PspPI GGNCC 5 cut(s) 44, 204, 220, 388, 724
PspPPI RGGWCCY 1 cut(s) 204
PstI CTGCAG 2 cut(s) 618, 933
PsuI RGATCY 2 cut(s) 422, 832
RsaI GTAC 2 cut(s) 689, 883
RsaNI GTAC 2 cut(s) 688, 882
RseI CAYNNNNRTG 2 cut(s) 29, 462
SapI GCTCTTC 1 cut(s) 867
SaqAI TTAA 5 cut(s) 171, 336, 468, 582, 1158
SatI GCNGC 6 cut(s) 483, 486, 501, 614, 929, 1113
Sau3AI GATC 4 cut(s) 422, 832, 990, 1196
Sau96I GGNCC 5 cut(s) 44, 204, 220, 388, 724
ScaI AGTACT 1 cut(s) 883
SchI GAGTC 4 cut(s) 29, 143, 575, 755
ScrFI CCNGG 5 cut(s) 386, 428, 733, 894, 952
SduI GDGCHC 2 cut(s) 862, 972
SfaNI GCATC 3 cut(s) 136, 295, 387
SfcI CTRYAG 2 cut(s) 614, 929
SfuI TTCGAA 1 cut(s) 56
SinI GGWCC 3 cut(s) 204, 388, 724
SmiMI CAYNNNNRTG 2 cut(s) 29, 462
SmlI CTYRAG 3 cut(s) 199, 273, 1265
SmoI CTYRAG 3 cut(s) 199, 273, 1265
SpeI ACTAGT 1 cut(s) 884
Sse9I AATT 7 cut(s) 168, 313, 333, 435, 938, 980, 1137
SsiI CCGC 4 cut(s) 284, 488, 1112, 1181
SspMI CTAG 1 cut(s) 885
StyD4I CCNGG 5 cut(s) 384, 426, 731, 892, 950
StyI CCWWGG 4 cut(s) 24, 216, 828, 1045
TaaI ACNGT 2 cut(s) 762, 851
TaiI ACGT 4 cut(s) 120, 612, 625, 693
TaqI TCGA 7 cut(s) 18, 56, 255, 812, 899, 977, 993
TasI AATT 7 cut(s) 168, 313, 333, 435, 938, 980, 1137
TatI WGTACW 1 cut(s) 881
TauI GCSGC 1 cut(s) 1115
TfiI GAWTC 2 cut(s) 346, 556
Tru1I TTAA 5 cut(s) 171, 336, 468, 582, 1158
Tru9I TTAA 5 cut(s) 171, 336, 468, 582, 1158
TscAI CASTG 5 cut(s) 300, 450, 484, 856, 1093
TseFI GTSAC 2 cut(s) 670, 823
TseI GCWGC 5 cut(s) 482, 485, 500, 613, 928
Tsp45I GTSAC 2 cut(s) 670, 823
TspDTI ATGAA 8 cut(s) 150, 314, 486, 762, 931, 951, 1179, 1271
TspGWI ACGGA 1 cut(s) 324
TspRI CASTG 5 cut(s) 300, 450, 484, 856, 1093
VpaK11BI GGWCC 3 cut(s) 204, 388, 724
VspI ATTAAT 1 cut(s) 171
XapI RAATTY 2 cut(s) 938, 980
XspI CTAG 1 cut(s) 885
ZraI GACGTC 1 cut(s) 118
ZrmI AGTACT 1 cut(s) 883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.