Rh2DG051100

rRNA processing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000145
Physical Location & Seq
Reverse (-)
3656125 .. 3657441
1317 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG051100.1

Sequence Viewer

Length: 1149 bp
ATGGAGAACCAGAACATCGAGTCCATGGAGATGGATAAGTCCGGTCCTTCTTCTTCGAACGAGGAGACCTCTTTCTCTGCGTTCTTCTCTGAAAAACGACAACTAAAGTTGCAAGACGTCTGGCCGGAGCTGGAGTCGTCTTTAGATGCCTGTGGCATTTCATGCGCAATTAATCTTCCCCAGAGCTCAGTAACAATCTCAAGGACCCCAACGACCAAGGGTCGAAACTATTACGACAAGGCCAAGAGTGTCGTCGAGCTTCTTGCAACAACTCAAGTGCCACCGCATCTGGCACTGGAAGTATTGAACGGAAATTGGAGATTTCATACTCTAATTAAGACTGGGAATCAAGAAGGTGGGTTCTGCTCCAAGTTCGGCATCAGCCCGGACCAGTTTGCTAAACGAAGGGACTGGCTTGCCGGATCCCTAGAGGCAATTTCGGCACTGACGCTTTGTCATCTTTATGTTAATGAAAACACTGCTGCTGCGGTGGGTTCGGCTGCTTCGGTATTAGAGTTTAGGAGGATTGTGGAAAACTGCATTGTTAGTGATGTGAATCCGGCAGAGTCTAACAACAAGATTAAAAAGTTTTTGAGTTATAAAAAGCACGTGCTGCAGAAACGTGGGGTGGATTACACGGCAGTATTGGAGAAGTCTGGCATGAGTGAAGTGACATCTTTTGGTGCAGTGACCAAGGATCCAGATGTTATGGACAGTGTTGGTGCTCTTCTTGAAGTTTTGGGAAGTACTAGTGTTCCGGGGTCGAAGGTGATACAGATATTGGACGGCCGGCTGCAGTATGAATTCATCAAGACCGGGTTTGAAAAGGGTGGGCTCTGCTCGAAATTTGATGGGATCGAGAAGGAGCTTGGTAAGAACAAGCAAAGATTGAAGCGCAACGCAAAGAACCTTGGAGACTTGTTGGTATGTGATGTGTATATTGACAGAAGCAGTGTCGTTGTAGTGGGGAGTTGTGCGACAGGGTTGAAGGAAATGAGGTCAATTGTGGAACGATGTCTGGTTAAAAATGAAGACCCTGCAACAGCGGTGAGGAGGCTAAGATCGTGTAATAAGAAACAGGGTAGTTTGAGATTATCTGATGAGAAGCAGGTCAGTTTGATGAAGAAGCTTGAGGGTCTGTGTCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

382

Amino Acids

42.01

Weight (kDa)

8.64

Isoelectric Point (pI)

46.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_KRR1_2nd PF21800 130 - 198 3e-09 KRR1 small subunit processome component, second KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000145)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08420
fragaria_vesca FvH4_1g11160 FvH4_2g08143 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36460 FvH4_3g36460 FvH4_3g45301 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_5g09160 FvH4_5g09161 FvH4_5g09380 FvH4_5g22900 FvH4_6g42520 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550
malus_domestica MD02G1015700.v1.1 MD02G1058900.v1.1 MD02G1059000.v1.1 MD03G1170900.v1.1 MD04G1231500.v1.1 MD13G1044300.v1.1 MD16G1045100.v1.1
prunus_persica Prupe.1G308200_v2.0.a1 Prupe.2G125300_v2.0.a1 Prupe.6G307800_v2.0.a1 Prupe.6G351700_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1
pyrus_communis pycom02g01420 pycom02g04810 pycom03g12790 pycom03g12800 pycom12g17840 pycom12g17850 pycom12g17860 pycom13g03890 pycom16g03970
rosa_chinensis RchiOBHm_Chr2g0090081 RchiOBHm_Chr3g0469061 RchiOBHm_Chr3g0469081 RchiOBHm_Chr4g0435531 RchiOBHm_Chr5g0014021 RchiOBHm_Chr5g0014031 RchiOBHm_Chr5g0014041 RchiOBHm_Chr7g0190151 RchiOBHm_Chr7g0190161 RchiOBHm_Chr7g0190171 RchiOBHm_Chr7g0210441
rosa_laevigata RLG00000003683 RLG00000003687 RLG00000003688 RLG00000004561 RLG00000004643 RLG00000016083 RLG00000021085 RLG00000024381 RLG00000032065 RLG00000032067 RLG00000032071 RLG00000032072 RLG00000032075
rosa_multiflora Rmu_co8284349.1_g000001 Rmu_co8324735.1_g000001 Rmu_co8355915.1_g000001 Rmu_co8388905.1_g000001 Rmu_sc0000302.1_g000041 Rmu_sc0000302.1_g000050 Rmu_sc0001940.1_g000034 Rmu_sc0003807.1_g000011 Rmu_sc0005803.1_g000001 Rmu_sc0005803.1_g000007 Rmu_sc0007139.1_g000007 Rmu_sc0007767.1_g000001 Rmu_sc0007767.1_g000003 Rmu_sc0007767.1_g000006 Rmu_sc0007933.1_g000005 Rmu_sc0008587.1_g000004 Rmu_sc0008968.1_g000004 Rmu_sc0018491.1_g000002 Rmu_sc0022420.1_g000001 Rmu_sc0027700.1_g000001 Rmu_sc0036218.1_g000001
rosa_roxburghii Rroxscaffold_1G00062590 Rroxscaffold_1G00062600 Rroxscaffold_1G00062620 Rroxscaffold_1G00062630 Rroxscaffold_1G00062640 Rroxscaffold_1G00062670 Rroxscaffold_1G00062680 Rroxscaffold_2G00091430 Rroxscaffold_2G00151410 Rroxscaffold_3G00245340 Rroxscaffold_3G00255390 Rroxscaffold_3G00264820 Rroxscaffold_3G00264830 Rroxscaffold_3G00265870 Rroxscaffold_5G00355140 Rroxscaffold_5G00376760 Rroxscaffold_6G00412230
rosa_rugosa Rorug02G0005200 Rorug02G0468300 Rorug02G0468300 Rorug02G0532400 Rorug03G0098900 Rorug03G0099000 Rorug03G0099400 Rorug04G0286000 Rorug05G0014400 Rorug05G0014500 Rorug05G0014600 Rorug05G0014600 Rorug05G0014600 Rorug05G0014800 Rorug05G0014900 Rorug05G0015000 Rorug05G0015100 Rorug05G0015100 Rorug05G0441300 Rorug06G0495300 Rorug06G0502600 Rorug06G0502700 Rorug07G0062300
rosa_samantha Rh2AG050900 Rh2BG049600 Rh2CG051800 Rh2CG234600 Rh2DG051100 Rh3BG171300 Rh3BG171800 Rh3CG336700 Rh3DG203600 Rh3DG203800 Rh4AG341600 Rh4AG341700 Rh4BG349900 Rh4CG364600 Rh4DG344200 Rh5AG108800 Rh5AG108900 Rh5AG109000 Rh5AG109100 Rh5BG105500 Rh5CG117300 Rh5CG117500 Rh5CG117600 Rh5DG104200 Rh5DG104400 Rh5DG104500 Rh5DG104600 Rh7BG102300 Rh7BG110600 Rh7BG110700 Rh7BG118900 Rh7CG103600 Rh7CG112800 Rh7CG113000 Rh7CG200300 Rh7CG271100 Rh7DG111300 Rh7DG111400 Rh7DG194400 Rh7DG261800 Rh7DG261900
rosa_wichuraiana Rw0G014550 Rw0G014580 Rw2G004580 Rw3G013980 Rw3G013990 Rw3G014000 Rw3G014020 Rw4G029810 Rw5G009500 Rw5G009510 Rw5G009520 Rw5G009530 Rw7G008640 Rw7G009350 Rw7G021680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 600
AatII GACGTC 1 cut(s) 120
Acc16I TGCGCA 1 cut(s) 166
Acc36I ACCTGC 1 cut(s) 1099
AciI CCGC 3 cut(s) 284, 488, 1046
AclWI GGATC 5 cut(s) 417, 430, 692, 705, 863
AcoI YGGCCR 2 cut(s) 122, 787
AcsI RAATTY 2 cut(s) 803, 845
AcvI CACGTG 1 cut(s) 610
AcyI GRCGYC 1 cut(s) 117
AfaI GTAC 1 cut(s) 748
AgsI TTSAA 5 cut(s) 307, 734, 824, 892, 988
AhdI GACNNNNNGTC 2 cut(s) 219, 453
AhlI ACTAGT 1 cut(s) 749
AloI GAACNNNNNNTCC 1 cut(s) 37
AluBI AGCT 5 cut(s) 130, 186, 259, 868, 1129
AluI AGCT 5 cut(s) 130, 186, 259, 868, 1129
Alw21I GWGCWC 2 cut(s) 188, 727
Alw26I GTCTC 2 cut(s) 59, 909
AlwI GGATC 5 cut(s) 417, 430, 692, 705, 863
AoxI GGCC 3 cut(s) 122, 240, 787
ApeKI GCWGC 5 cut(s) 482, 485, 500, 613, 793
ApoI RAATTY 2 cut(s) 803, 845
AseI ATTAAT 1 cut(s) 171
AspLEI GCGC 2 cut(s) 167, 897
AspS9I GGNCC 3 cut(s) 44, 204, 388
AsuC2I CCSGG 3 cut(s) 386, 759, 817
AsuHPI GGTGA 2 cut(s) 781, 1060
AsuII TTCGAA 1 cut(s) 56
AvaII GGWCC 3 cut(s) 44, 204, 388
BamHI GGATCC 2 cut(s) 422, 697
BanII GRGCYC 2 cut(s) 188, 837
BbrPI CACGTG 1 cut(s) 610
BbsI GAAGAC 1 cut(s) 1038
Bbv12I GWGCWC 2 cut(s) 188, 727
BbvI GCAGC 5 cut(s) 469, 472, 487, 600, 780
BccI CCATC 2 cut(s) 25, 845
BceAI ACGGC 2 cut(s) 654, 802
BcgI CGANNNNNNTGC 2 cut(s) 245, 279
BcnI CCSGG 3 cut(s) 386, 759, 817
BcoDI GTCTC 2 cut(s) 59, 909
BcuI ACTAGT 1 cut(s) 749
BfaI CTAG 2 cut(s) 428, 750
BfmI CTRYAG 2 cut(s) 614, 794
BfuAI ACCTGC 1 cut(s) 1099
BisI GCNGC 5 cut(s) 483, 486, 501, 614, 794
BlsI GCNGC 5 cut(s) 484, 487, 502, 615, 795
BmcAI AGTACT 1 cut(s) 748
Bme1390I CCNGG 3 cut(s) 386, 759, 817
Bme18I GGWCC 3 cut(s) 44, 204, 388
BmeRI GACNNNNNGTC 2 cut(s) 219, 453
BmgT120I GGNCC 3 cut(s) 44, 204, 388
BmiI GGNNCC 3 cut(s) 206, 424, 699
BmrFI CCNGG 3 cut(s) 386, 759, 817
BmrI ACTGGG 1 cut(s) 351
BmsI GCATC 3 cut(s) 136, 295, 387
BmuI ACTGGG 1 cut(s) 351
BpiI GAAGAC 1 cut(s) 1038
BplI GAGNNNNNCTC 2 cut(s) 53, 85
BpmI CTGGAG 1 cut(s) 152
Bpu14I TTCGAA 1 cut(s) 56
BpuEI CTTGAG 2 cut(s) 184, 258
BpuMI CCSGG 3 cut(s) 386, 759, 817
BsaAI YACGTR 1 cut(s) 610
BsaBI GATNNNNATC 1 cut(s) 555
BsaHI GRCGYC 1 cut(s) 117
BsaI GGTCTC 1 cut(s) 59
BsaJI CCNNGG 5 cut(s) 24, 216, 693, 758, 910
BsaWI WCCGGW 1 cut(s) 41
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bse118I RCCGGY 1 cut(s) 789
Bse1I ACTGG 4 cut(s) 300, 346, 391, 416
Bse8I GATNNNNATC 1 cut(s) 555
BseDI CCNNGG 5 cut(s) 24, 216, 693, 758, 910
BseJI GATNNNNATC 1 cut(s) 555
BseMII CTCAG 1 cut(s) 201
BseNI ACTGG 4 cut(s) 300, 346, 391, 416
BseRI GAGGAG 2 cut(s) 77, 1066
BseX3I CGGCCG 1 cut(s) 787
BseXI GCAGC 5 cut(s) 469, 472, 487, 600, 780
BsgI GTGCAG 1 cut(s) 705
Bsh1285I CGRYCG 1 cut(s) 790
BshFI GGCC 3 cut(s) 124, 242, 789
BsiEI CGRYCG 1 cut(s) 790
BsiHKAI GWGCWC 2 cut(s) 188, 727
BsiSI CCGG 8 cut(s) 42, 125, 386, 420, 560, 758, 790, 816
BslFI GGGAC 1 cut(s) 422
BsmAI GTCTC 2 cut(s) 59, 909
BsmFI GGGAC 1 cut(s) 422
BsnI GGCC 3 cut(s) 124, 242, 789
Bso31I GGTCTC 1 cut(s) 59
Bsp119I TTCGAA 1 cut(s) 56
Bsp1286I GDGCHC 3 cut(s) 188, 727, 837
Bsp143I GATC 4 cut(s) 422, 697, 855, 1061
Bsp19I CCATGG 1 cut(s) 24
BspACI CCGC 3 cut(s) 284, 488, 1046
BspANI GGCC 3 cut(s) 124, 242, 789
BspCNI CTCAG 1 cut(s) 200
BspLI GGNNCC 3 cut(s) 206, 424, 699
BspMAI CTGCAG 2 cut(s) 618, 798
BspMI ACCTGC 1 cut(s) 1099
BspPI GGATC 5 cut(s) 417, 430, 692, 705, 863
BspQI GCTCTTC 1 cut(s) 732
BspT104I TTCGAA 1 cut(s) 56
BspTNI GGTCTC 1 cut(s) 59
BsrFI RCCGGY 1 cut(s) 789
BsrI ACTGG 4 cut(s) 300, 346, 391, 416
BssAI RCCGGY 1 cut(s) 789
BssECI CCNNGG 5 cut(s) 24, 216, 693, 758, 910
BssMI GATC 4 cut(s) 422, 697, 855, 1061
BssNI GRCGYC 1 cut(s) 117
BssT1I CCWWGG 4 cut(s) 24, 216, 693, 910
Bst4CI ACNGT 1 cut(s) 716
Bst6I CTCTTC 1 cut(s) 732
BstACI GRCGYC 1 cut(s) 117
BstAPI GCANNNNNTGC 2 cut(s) 162, 613
BstBAI YACGTR 1 cut(s) 610
BstBI TTCGAA 1 cut(s) 56
BstC8I GCNNGC 2 cut(s) 417, 791
BstDEI CTNAG 2 cut(s) 187, 1058
BstDSI CCRYGG 1 cut(s) 24
BstHHI GCGC 2 cut(s) 167, 897
BstKTI GATC 4 cut(s) 425, 700, 858, 1064
BstMAI GTCTC 2 cut(s) 59, 909
BstMBI GATC 4 cut(s) 422, 697, 855, 1061
BstMCI CGRYCG 1 cut(s) 790
BstMWI GCNNNNNNNGC 3 cut(s) 162, 440, 613
BstSCI CCNGG 3 cut(s) 384, 757, 815
BstSFI CTRYAG 2 cut(s) 614, 794
BstV1I GCAGC 5 cut(s) 469, 472, 487, 600, 780
BstV2I GAAGAC 1 cut(s) 1038
BstX2I RGATCY 2 cut(s) 422, 697
BstXI CCANNNNNNTGG 1 cut(s) 31
BstYI RGATCY 2 cut(s) 422, 697
BstZI CGGCCG 1 cut(s) 787
BsuRI GGCC 3 cut(s) 124, 242, 789
BtgI CCRYGG 1 cut(s) 24
BtsI GCAGTG 3 cut(s) 477, 693, 958
BtsIMutI CAGTG 6 cut(s) 293, 443, 477, 693, 721, 958
BveI ACCTGC 1 cut(s) 1099
Cac8I GCNNGC 2 cut(s) 417, 791
CfoI GCGC 2 cut(s) 167, 897
Cfr10I RCCGGY 1 cut(s) 789
Cfr13I GGNCC 3 cut(s) 44, 204, 388
CseI GACGC 1 cut(s) 457
Csp6I GTAC 1 cut(s) 747
CviAII CATG 3 cut(s) 25, 162, 661
CviQI GTAC 1 cut(s) 747
DdeI CTNAG 2 cut(s) 187, 1058
DpnI GATC 4 cut(s) 424, 699, 857, 1063
DpnII GATC 4 cut(s) 422, 697, 855, 1061
DriI GACNNNNNGTC 2 cut(s) 219, 453
EaeI YGGCCR 2 cut(s) 122, 787
EagI CGGCCG 1 cut(s) 787
Eam1104I CTCTTC 1 cut(s) 732
Eam1105I GACNNNNNGTC 2 cut(s) 219, 453
EarI CTCTTC 1 cut(s) 732
Ecl136II GAGCTC 1 cut(s) 186
EclXI CGGCCG 1 cut(s) 787
Eco130I CCWWGG 4 cut(s) 24, 216, 693, 910
Eco24I GRGCYC 2 cut(s) 188, 837
Eco31I GGTCTC 1 cut(s) 59
Eco47I GGWCC 3 cut(s) 44, 204, 388
Eco52I CGGCCG 1 cut(s) 787
Eco53kI GAGCTC 1 cut(s) 186
Eco72I CACGTG 1 cut(s) 610
EcoICRI GAGCTC 1 cut(s) 186
EcoO109I RGGNCCY 1 cut(s) 204
EcoRI GAATTC 1 cut(s) 803
EcoT14I CCWWGG 4 cut(s) 24, 216, 693, 910
EcoT38I GRGCYC 2 cut(s) 188, 837
ErhI CCWWGG 4 cut(s) 24, 216, 693, 910
FaeI CATG 3 cut(s) 28, 165, 664
FaqI GGGAC 1 cut(s) 422
FatI CATG 3 cut(s) 24, 161, 660
Fnu4HI GCNGC 5 cut(s) 483, 486, 501, 614, 794
FriOI GRGCYC 2 cut(s) 188, 837
Fsp4HI GCNGC 5 cut(s) 483, 486, 501, 614, 794
FspBI CTAG 2 cut(s) 428, 750
FspI TGCGCA 1 cut(s) 166
GlaI GCGC 2 cut(s) 166, 896
GluI GCNGC 5 cut(s) 483, 486, 501, 614, 794
GsuI CTGGAG 1 cut(s) 152
HaeIII GGCC 3 cut(s) 124, 242, 789
HapII CCGG 8 cut(s) 42, 125, 386, 420, 560, 758, 790, 816
HgaI GACGC 1 cut(s) 457
HhaI GCGC 2 cut(s) 167, 897
Hin1I GRCGYC 1 cut(s) 117
Hin1II CATG 3 cut(s) 28, 165, 664
Hin6I GCGC 2 cut(s) 165, 895
HinP1I GCGC 2 cut(s) 165, 895
HindIII AAGCTT 1 cut(s) 1127
HinfI GANTC 5 cut(s) 20, 134, 346, 556, 566
HpaII CCGG 8 cut(s) 42, 125, 386, 420, 560, 758, 790, 816
HphI GGTGA 2 cut(s) 781, 1060
Hpy188I TCNGA 2 cut(s) 91, 1099
Hpy188III TCNNGA 5 cut(s) 350, 701, 731, 811, 859
Hpy99I CGWCG 1 cut(s) 257
HpyAV CCTTC 6 cut(s) 57, 347, 399, 760, 856, 982
HpyCH4III ACNGT 1 cut(s) 716
HpyCH4IV ACGT 3 cut(s) 117, 609, 622
HpyCH4V TGCA 7 cut(s) 112, 266, 540, 616, 686, 796, 1040
HpyF10VI GCNNNNNNNGC 3 cut(s) 162, 440, 613
HpyF3I CTNAG 2 cut(s) 187, 1058
HpySE526I ACGT 3 cut(s) 117, 609, 622
Hsp92I GRCGYC 1 cut(s) 117
Hsp92II CATG 3 cut(s) 28, 165, 664
HspAI GCGC 2 cut(s) 165, 895
KroI GCCGGC 1 cut(s) 789
KroNI GCCGGC 1 cut(s) 791
Kzo9I GATC 4 cut(s) 422, 697, 855, 1061
LguI GCTCTTC 1 cut(s) 732
LmnI GCTCC 3 cut(s) 127, 371, 865
Lsp1109I GCAGC 5 cut(s) 469, 472, 487, 600, 780
LweI GCATC 3 cut(s) 136, 295, 387
MaeI CTAG 2 cut(s) 428, 750
MaeII ACGT 3 cut(s) 117, 609, 622
MaeIII GTNAC 3 cut(s) 190, 670, 688
MalI GATC 4 cut(s) 424, 699, 857, 1063
MboI GATC 4 cut(s) 422, 697, 855, 1061
MboII GAAGA 7 cut(s) 42, 45, 76, 167, 719, 1043, 1135
MfeI CAATTG 1 cut(s) 1002
MflI RGATCY 2 cut(s) 422, 697
MhlI GDGCHC 3 cut(s) 188, 727, 837
MluCI AATT 7 cut(s) 168, 313, 333, 435, 803, 845, 1002
MlyI GAGTC 3 cut(s) 29, 143, 575
MnlI CCTC 8 cut(s) 55, 79, 424, 516, 990, 1044, 1047, 1126
MroNI GCCGGC 1 cut(s) 789
MseI TTAA 5 cut(s) 171, 336, 468, 582, 1023
MslI CAYNNNNRTG 2 cut(s) 29, 462
MspA1I CMGCKG 1 cut(s) 1046
MspI CCGG 8 cut(s) 42, 125, 386, 420, 560, 758, 790, 816
MspR9I CCNGG 3 cut(s) 386, 759, 817
MunI CAATTG 1 cut(s) 1002
MwoI GCNNNNNNNGC 3 cut(s) 162, 440, 613
NaeI GCCGGC 1 cut(s) 791
NciI CCSGG 3 cut(s) 386, 759, 817
NcoI CCATGG 1 cut(s) 24
NdeII GATC 4 cut(s) 422, 697, 855, 1061
NgoMIV GCCGGC 1 cut(s) 789
NlaIII CATG 3 cut(s) 28, 165, 664
NlaIV GGNNCC 3 cut(s) 206, 424, 699
NmuCI GTSAC 2 cut(s) 670, 688
NsbI TGCGCA 1 cut(s) 166
NspV TTCGAA 1 cut(s) 56
PciSI GCTCTTC 1 cut(s) 732
PdiI GCCGGC 1 cut(s) 791
PfeI GAWTC 2 cut(s) 346, 556
PkrI GCNGC 5 cut(s) 484, 487, 502, 615, 795
PleI GAGTC 3 cut(s) 28, 142, 574
PmaCI CACGTG 1 cut(s) 610
PmlI CACGTG 1 cut(s) 610
PpsI GAGTC 3 cut(s) 28, 142, 574
Ppu21I YACGTR 1 cut(s) 610
PpuMI RGGWCCY 1 cut(s) 204
PshBI ATTAAT 1 cut(s) 171
PsiI TTATAA 1 cut(s) 600
Psp124BI GAGCTC 1 cut(s) 188
Psp5II RGGWCCY 1 cut(s) 204
PspCI CACGTG 1 cut(s) 610
PspN4I GGNNCC 3 cut(s) 206, 424, 699
PspPI GGNCC 3 cut(s) 44, 204, 388
PspPPI RGGWCCY 1 cut(s) 204
PstI CTGCAG 2 cut(s) 618, 798
PsuI RGATCY 2 cut(s) 422, 697
RsaI GTAC 1 cut(s) 748
RsaNI GTAC 1 cut(s) 747
RseI CAYNNNNRTG 2 cut(s) 29, 462
SacI GAGCTC 1 cut(s) 188
SapI GCTCTTC 1 cut(s) 732
SaqAI TTAA 5 cut(s) 171, 336, 468, 582, 1023
SatI GCNGC 5 cut(s) 483, 486, 501, 614, 794
Sau3AI GATC 4 cut(s) 422, 697, 855, 1061
Sau96I GGNCC 3 cut(s) 44, 204, 388
ScaI AGTACT 1 cut(s) 748
SchI GAGTC 3 cut(s) 29, 143, 575
ScrFI CCNGG 3 cut(s) 386, 759, 817
SduI GDGCHC 3 cut(s) 188, 727, 837
SfaNI GCATC 3 cut(s) 136, 295, 387
SfcI CTRYAG 2 cut(s) 614, 794
SfuI TTCGAA 1 cut(s) 56
SinI GGWCC 3 cut(s) 44, 204, 388
SmiMI CAYNNNNRTG 2 cut(s) 29, 462
SmlI CTYRAG 3 cut(s) 199, 273, 1130
SmoI CTYRAG 3 cut(s) 199, 273, 1130
SpeI ACTAGT 1 cut(s) 749
Sse9I AATT 7 cut(s) 168, 313, 333, 435, 803, 845, 1002
SsiI CCGC 3 cut(s) 284, 488, 1046
SspMI CTAG 2 cut(s) 428, 750
SstI GAGCTC 1 cut(s) 188
StyD4I CCNGG 3 cut(s) 384, 757, 815
StyI CCWWGG 4 cut(s) 24, 216, 693, 910
TaaI ACNGT 1 cut(s) 716
TaiI ACGT 3 cut(s) 120, 612, 625
TaqI TCGA 7 cut(s) 18, 56, 223, 255, 764, 842, 858
TasI AATT 7 cut(s) 168, 313, 333, 435, 803, 845, 1002
TatI WGTACW 1 cut(s) 746
TfiI GAWTC 2 cut(s) 346, 556
Tru1I TTAA 5 cut(s) 171, 336, 468, 582, 1023
Tru9I TTAA 5 cut(s) 171, 336, 468, 582, 1023
TscAI CASTG 6 cut(s) 300, 450, 484, 693, 721, 958
TseFI GTSAC 2 cut(s) 670, 688
TseI GCWGC 5 cut(s) 482, 485, 500, 613, 793
Tsp45I GTSAC 2 cut(s) 670, 688
TspDTI ATGAA 7 cut(s) 150, 314, 486, 796, 816, 1044, 1136
TspGWI ACGGA 1 cut(s) 324
TspRI CASTG 6 cut(s) 300, 450, 484, 693, 721, 958
VpaK11BI GGWCC 3 cut(s) 44, 204, 388
VspI ATTAAT 1 cut(s) 171
XapI RAATTY 2 cut(s) 803, 845
XspI CTAG 2 cut(s) 428, 750
ZraI GACGTC 1 cut(s) 118
ZrmI AGTACT 1 cut(s) 748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.