Rorug05G0014800

Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000145
Physical Location & Seq
Reverse (-)
968035 .. 970249
2215 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0014800.1

Sequence Viewer

Length: 939 bp
ATGGAGAATTTCCCGGTTGTTAACATGGAGCAACTCAACGGTGAAGAGAGACAAGCAACCATGAAGAAGATAAACGATGCTTGTGAGAATTGGGGTTTCTTTGAGTTGGTGAACCATGGGATATCCCATGAGCTGATGGACAAGGTAGAGAAGCTAACAAAGGAGCACTACAGAAAGTGCATGGAGCAAAGGTTCAAGGAAATGGTGGCAAGCAAAGGCCTCGAATCTGTCAACTCTGAAATCGAAGATTTGGACTGGGAAAGCACCTTCTTCTTGCGCCACCTCCCTTACTCCAACATCTCCCAAATCCCCGATCTCGACGAAGATTACAGGGAGGCCATGAAGGAATTTGCAGTGGAACTAGAGAAACTGGCTGAGCAACTGTTGGACTTGCTGTGTGAGAATCTGGGGCTGGATAAGGGTTACCTGAAGAAGGCTTTCTATGGATCCGAGGGACCAAATTTTGGGACCAAGGTGAGCAACTACCCTCCATGCCCCAAACCGGACCTGATCAAGGGACTCCGGGCCCACACCGACGCCGGTGGCATCATCCTACTATTCCAAGATGACAAGGTCAGCGGCCTCCAGCTCCTCAAGGATGACCAATGGATTGATGTGCCACCAATGCACCACTCCATTGTCATCAACTTAGGTGACCAACTTGAGGTGATCACTAATGGCAAGTACAAGAGTGTGATGCACCGTGTGATAGCGCAACCTGATGGAAATAGAATGTCGATAGCCTCGTTCTACAACCCAGGCAATGATGCTTTTATCTCTCCAGCACCAGCAATGCTTGAAAAACAAACTGAGGAATGCCCAACTTATCCAAAATTTGTGTTTGATGACTACATGAAGCTCTATTCAGGCCTCAAATTCCAAGCCAAGGAGCCGAGGTTTGAAGCTATGAAGGCTATGGAATCAATTGCAACTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

312

Amino Acids

35.71

Weight (kDa)

5.0

Isoelectric Point (pI)

38.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 5 - 95 2.6e-16 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 159 - 253 4.4e-33 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000145)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08420
fragaria_vesca FvH4_1g11160 FvH4_2g08143 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36460 FvH4_3g36460 FvH4_3g45301 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_5g09160 FvH4_5g09161 FvH4_5g09380 FvH4_5g22900 FvH4_6g42520 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550
malus_domestica MD02G1015700.v1.1 MD02G1058900.v1.1 MD02G1059000.v1.1 MD03G1170900.v1.1 MD04G1231500.v1.1 MD13G1044300.v1.1 MD16G1045100.v1.1
prunus_persica Prupe.1G308200_v2.0.a1 Prupe.2G125300_v2.0.a1 Prupe.6G307800_v2.0.a1 Prupe.6G351700_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1
pyrus_communis pycom02g01420 pycom02g04810 pycom03g12790 pycom03g12800 pycom12g17840 pycom12g17850 pycom12g17860 pycom13g03890 pycom16g03970
rosa_chinensis RchiOBHm_Chr2g0090081 RchiOBHm_Chr3g0469061 RchiOBHm_Chr3g0469081 RchiOBHm_Chr4g0435531 RchiOBHm_Chr5g0014021 RchiOBHm_Chr5g0014031 RchiOBHm_Chr5g0014041 RchiOBHm_Chr7g0190151 RchiOBHm_Chr7g0190161 RchiOBHm_Chr7g0190171 RchiOBHm_Chr7g0210441
rosa_laevigata RLG00000003683 RLG00000003687 RLG00000003688 RLG00000004561 RLG00000004643 RLG00000016083 RLG00000021085 RLG00000024381 RLG00000032065 RLG00000032067 RLG00000032071 RLG00000032072 RLG00000032075
rosa_multiflora Rmu_co8284349.1_g000001 Rmu_co8324735.1_g000001 Rmu_co8355915.1_g000001 Rmu_co8388905.1_g000001 Rmu_sc0000302.1_g000041 Rmu_sc0000302.1_g000050 Rmu_sc0001940.1_g000034 Rmu_sc0003807.1_g000011 Rmu_sc0005803.1_g000001 Rmu_sc0005803.1_g000007 Rmu_sc0007139.1_g000007 Rmu_sc0007767.1_g000001 Rmu_sc0007767.1_g000003 Rmu_sc0007767.1_g000006 Rmu_sc0007933.1_g000005 Rmu_sc0008587.1_g000004 Rmu_sc0008968.1_g000004 Rmu_sc0018491.1_g000002 Rmu_sc0022420.1_g000001 Rmu_sc0027700.1_g000001 Rmu_sc0036218.1_g000001
rosa_roxburghii Rroxscaffold_1G00062590 Rroxscaffold_1G00062600 Rroxscaffold_1G00062620 Rroxscaffold_1G00062630 Rroxscaffold_1G00062640 Rroxscaffold_1G00062670 Rroxscaffold_1G00062680 Rroxscaffold_2G00091430 Rroxscaffold_2G00151410 Rroxscaffold_3G00245340 Rroxscaffold_3G00255390 Rroxscaffold_3G00264820 Rroxscaffold_3G00264830 Rroxscaffold_3G00265870 Rroxscaffold_5G00355140 Rroxscaffold_5G00376760 Rroxscaffold_6G00412230
rosa_rugosa Rorug02G0005200 Rorug02G0468300 Rorug02G0468300 Rorug02G0532400 Rorug03G0098900 Rorug03G0099000 Rorug03G0099400 Rorug04G0286000 Rorug05G0014400 Rorug05G0014500 Rorug05G0014600 Rorug05G0014600 Rorug05G0014600 Rorug05G0014800 Rorug05G0014900 Rorug05G0015000 Rorug05G0015100 Rorug05G0015100 Rorug05G0441300 Rorug06G0495300 Rorug06G0502600 Rorug06G0502700 Rorug07G0062300
rosa_samantha Rh2AG050900 Rh2BG049600 Rh2CG051800 Rh2CG234600 Rh2DG051100 Rh3BG171300 Rh3BG171800 Rh3CG336700 Rh3DG203600 Rh3DG203800 Rh4AG341600 Rh4AG341700 Rh4BG349900 Rh4CG364600 Rh4DG344200 Rh5AG108800 Rh5AG108900 Rh5AG109000 Rh5AG109100 Rh5BG105500 Rh5CG117300 Rh5CG117500 Rh5CG117600 Rh5DG104200 Rh5DG104400 Rh5DG104500 Rh5DG104600 Rh7BG102300 Rh7BG110600 Rh7BG110700 Rh7BG118900 Rh7CG103600 Rh7CG112800 Rh7CG113000 Rh7CG200300 Rh7CG271100 Rh7DG111300 Rh7DG111400 Rh7DG194400 Rh7DG261800 Rh7DG261900
rosa_wichuraiana Rw0G014550 Rw0G014580 Rw2G004580 Rw3G013980 Rw3G013990 Rw3G014000 Rw3G014020 Rw4G029810 Rw5G009500 Rw5G009510 Rw5G009520 Rw5G009530 Rw7G008640 Rw7G009350 Rw7G021680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 464
AciI CCGC 1 cut(s) 579
AclWI GGATC 2 cut(s) 441, 454
AcsI RAATTY 5 cut(s) 7, 347, 460, 833, 875
AcuI CTGAAG 1 cut(s) 449
AcyI GRCGYC 1 cut(s) 537
AdeI CACNNNGTG 1 cut(s) 706
AfaI GTAC 1 cut(s) 686
AfiI CCNNNNNNNGG 6 cut(s) 433, 464, 502, 514, 664, 886
AgsI TTSAA 3 cut(s) 196, 800, 902
AjnI CCWGG 1 cut(s) 757
AloI GAACNNNNNNTCC 2 cut(s) 176, 208
AluBI AGCT 5 cut(s) 133, 154, 589, 859, 905
AluI AGCT 5 cut(s) 133, 154, 589, 859, 905
Alw21I GWGCWC 1 cut(s) 168
Alw26I GTCTC 1 cut(s) 43
AlwI GGATC 2 cut(s) 441, 454
AoxI GGCC 5 cut(s) 217, 336, 525, 580, 868
ApaI GGGCCC 1 cut(s) 529
ApoI RAATTY 5 cut(s) 7, 347, 460, 833, 875
Asp700I GAANNNNTTC 1 cut(s) 437
AspLEI GCGC 2 cut(s) 279, 715
AspS9I GGNCC 5 cut(s) 455, 468, 505, 525, 526
AsuC2I CCSGG 2 cut(s) 14, 524
AsuHPI GGTGA 5 cut(s) 53, 121, 487, 665, 679
AvaII GGWCC 3 cut(s) 455, 468, 505
BaeGI GKGCMC 1 cut(s) 529
BamHI GGATCC 1 cut(s) 446
BanII GRGCYC 1 cut(s) 529
Bbv12I GWGCWC 1 cut(s) 168
BccI CCATC 2 cut(s) 130, 716
BcgI CGANNNNNNTGC 2 cut(s) 202, 236
BciT130I CCWGG 1 cut(s) 759
BclI TGATCA 2 cut(s) 510, 669
BcnI CCSGG 2 cut(s) 14, 524
BcoDI GTCTC 1 cut(s) 43
BfaI CTAG 1 cut(s) 362
BfmI CTRYAG 1 cut(s) 169
BisI GCNGC 1 cut(s) 580
BlpI GCTNAGC 1 cut(s) 375
BlsI GCNGC 1 cut(s) 581
Bme1390I CCNGG 3 cut(s) 14, 524, 759
Bme18I GGWCC 3 cut(s) 455, 468, 505
BmgT120I GGNCC 5 cut(s) 455, 468, 505, 525, 526
BmiI GGNNCC 5 cut(s) 448, 456, 469, 527, 891
BmrFI CCNGG 3 cut(s) 14, 524, 759
BmrI ACTGGG 1 cut(s) 265
BmsI GCATC 4 cut(s) 67, 555, 687, 757
BmuI ACTGGG 1 cut(s) 265
BpmI CTGGAG 2 cut(s) 569, 765
Bpu1102I GCTNAGC 1 cut(s) 375
BpuEI CTTGAG 2 cut(s) 578, 683
BpuMI CCSGG 2 cut(s) 14, 524
BsaHI GRCGYC 1 cut(s) 537
BsaJI CCNNGG 6 cut(s) 115, 450, 471, 757, 885, 893
BsaWI WCCGGW 1 cut(s) 502
BsaXI ACNNNNNCTCC 4 cut(s) 176, 206, 881, 911
Bsc4I CCNNNNNNNGG 6 cut(s) 433, 464, 502, 514, 664, 886
Bse118I RCCGGY 1 cut(s) 539
Bse1I ACTGG 2 cut(s) 260, 375
Bse3DI GCAATG 2 cut(s) 769, 798
BseBI CCWGG 1 cut(s) 759
BseDI CCNNGG 6 cut(s) 115, 450, 471, 757, 885, 893
BseGI GGATG 2 cut(s) 549, 604
BseLI CCNNNNNNNGG 6 cut(s) 433, 464, 502, 514, 664, 886
BseMI GCAATG 2 cut(s) 769, 798
BseMII CTCAG 2 cut(s) 366, 801
BseNI ACTGG 2 cut(s) 260, 375
BseRI GAGGAG 1 cut(s) 581
BseSI GKGCMC 1 cut(s) 529
BshFI GGCC 5 cut(s) 219, 338, 527, 582, 870
BsiHKAI GWGCWC 1 cut(s) 168
BsiSI CCGG 4 cut(s) 14, 503, 523, 540
BslFI GGGAC 3 cut(s) 468, 481, 531
BslI CCNNNNNNNGG 6 cut(s) 433, 464, 502, 514, 664, 886
BsmAI GTCTC 1 cut(s) 43
BsmFI GGGAC 3 cut(s) 468, 481, 531
BsmI GAATGC 1 cut(s) 821
BsnI GGCC 5 cut(s) 219, 338, 527, 582, 870
Bsp120I GGGCCC 1 cut(s) 525
Bsp1286I GDGCHC 2 cut(s) 168, 529
Bsp143I GATC 4 cut(s) 313, 446, 510, 669
Bsp1720I GCTNAGC 1 cut(s) 375
Bsp19I CCATGG 1 cut(s) 115
BspACI CCGC 1 cut(s) 579
BspANI GGCC 5 cut(s) 219, 338, 527, 582, 870
BspCNI CTCAG 2 cut(s) 367, 802
BspLI GGNNCC 5 cut(s) 448, 456, 469, 527, 891
BspPI GGATC 2 cut(s) 441, 454
BsrDI GCAATG 2 cut(s) 769, 798
BsrFI RCCGGY 1 cut(s) 539
BsrI ACTGG 2 cut(s) 260, 375
BssAI RCCGGY 1 cut(s) 539
BssECI CCNNGG 6 cut(s) 115, 450, 471, 757, 885, 893
BssMI GATC 4 cut(s) 313, 446, 510, 669
BssNI GRCGYC 1 cut(s) 537
BssT1I CCWWGG 3 cut(s) 115, 471, 885
Bst2UI CCWGG 1 cut(s) 759
Bst4CI ACNGT 4 cut(s) 41, 384, 704, 934
Bst6I CTCTTC 1 cut(s) 39
BstACI GRCGYC 1 cut(s) 537
BstC8I GCNNGC 1 cut(s) 211
BstDEI CTNAG 3 cut(s) 375, 649, 810
BstDSI CCRYGG 1 cut(s) 115
BstEII GGTNACC 2 cut(s) 422, 653
BstENI CCTNNNNNAGG 2 cut(s) 431, 512
BstF5I GGATG 2 cut(s) 549, 604
BstHHI GCGC 2 cut(s) 279, 715
BstKTI GATC 4 cut(s) 316, 449, 513, 672
BstMAI GTCTC 1 cut(s) 43
BstMBI GATC 4 cut(s) 313, 446, 510, 669
BstMWI GCNNNNNNNGC 2 cut(s) 625, 911
BstNI CCWGG 1 cut(s) 759
BstPI GGTNACC 2 cut(s) 422, 653
BstSCI CCNGG 3 cut(s) 12, 522, 757
BstSFI CTRYAG 1 cut(s) 169
BstSLI GKGCMC 1 cut(s) 529
BstX2I RGATCY 1 cut(s) 446
BstYI RGATCY 1 cut(s) 446
BsuRI GGCC 5 cut(s) 219, 338, 527, 582, 870
BtgI CCRYGG 1 cut(s) 115
BtsCI GGATG 2 cut(s) 549, 604
BtsI GCAGTG 1 cut(s) 360
BtsIMutI CAGTG 1 cut(s) 360
Cac8I GCNNGC 1 cut(s) 211
CfoI GCGC 2 cut(s) 279, 715
Cfr10I RCCGGY 1 cut(s) 539
Cfr13I GGNCC 5 cut(s) 455, 468, 505, 525, 526
CseI GACGC 1 cut(s) 545
Csp6I GTAC 1 cut(s) 685
CviAII CATG 8 cut(s) 25, 61, 116, 128, 181, 340, 492, 853
CviQI GTAC 1 cut(s) 685
DdeI CTNAG 3 cut(s) 375, 649, 810
DpnI GATC 4 cut(s) 315, 448, 512, 671
DpnII GATC 4 cut(s) 313, 446, 510, 669
DraIII CACNNNGTG 1 cut(s) 706
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
Eco130I CCWWGG 3 cut(s) 115, 471, 885
Eco147I AGGCCT 2 cut(s) 219, 870
Eco24I GRGCYC 1 cut(s) 529
Eco32I GATATC 1 cut(s) 123
Eco47I GGWCC 3 cut(s) 455, 468, 505
Eco57I CTGAAG 1 cut(s) 449
Eco91I GGTNACC 2 cut(s) 422, 653
EcoNI CCTNNNNNAGG 2 cut(s) 431, 512
EcoO65I GGTNACC 2 cut(s) 422, 653
EcoRII CCWGG 1 cut(s) 757
EcoRV GATATC 1 cut(s) 123
EcoT14I CCWWGG 3 cut(s) 115, 471, 885
EcoT38I GRGCYC 1 cut(s) 529
ErhI CCWWGG 3 cut(s) 115, 471, 885
FaeI CATG 8 cut(s) 28, 64, 119, 131, 184, 343, 495, 856
FaqI GGGAC 3 cut(s) 468, 481, 531
FatI CATG 8 cut(s) 24, 60, 115, 127, 180, 339, 491, 852
FbaI TGATCA 2 cut(s) 510, 669
Fnu4HI GCNGC 1 cut(s) 580
FokI GGATG 2 cut(s) 536, 611
FriOI GRGCYC 1 cut(s) 529
Fsp4HI GCNGC 1 cut(s) 580
FspBI CTAG 1 cut(s) 362
GlaI GCGC 2 cut(s) 278, 714
GluI GCNGC 1 cut(s) 580
GsuI CTGGAG 2 cut(s) 569, 765
HaeIII GGCC 5 cut(s) 219, 338, 527, 582, 870
HapII CCGG 4 cut(s) 14, 503, 523, 540
HgaI GACGC 1 cut(s) 545
HhaI GCGC 2 cut(s) 279, 715
Hin1I GRCGYC 1 cut(s) 537
Hin1II CATG 8 cut(s) 28, 64, 119, 131, 184, 343, 495, 856
Hin6I GCGC 2 cut(s) 277, 713
HinP1I GCGC 2 cut(s) 277, 713
HincII GTYRAC 2 cut(s) 22, 232
HindII GTYRAC 2 cut(s) 22, 232
HinfI GANTC 4 cut(s) 224, 403, 519, 920
HpaI GTTAAC 1 cut(s) 22
HpaII CCGG 4 cut(s) 14, 503, 523, 540
HphI GGTGA 5 cut(s) 53, 121, 487, 665, 679
Hpy166II GTNNAC 3 cut(s) 22, 112, 232
Hpy188I TCNGA 2 cut(s) 238, 451
Hpy188III TCNNGA 1 cut(s) 317
Hpy8I GTNNAC 3 cut(s) 22, 112, 232
Hpy99I CGWCG 2 cut(s) 323, 539
HpyAV CCTTC 4 cut(s) 277, 337, 427, 904
HpyCH4III ACNGT 4 cut(s) 41, 384, 704, 934
HpyCH4V TGCA 5 cut(s) 180, 353, 628, 700, 929
HpyF10VI GCNNNNNNNGC 2 cut(s) 625, 911
HpyF3I CTNAG 3 cut(s) 375, 649, 810
Hsp92I GRCGYC 1 cut(s) 537
Hsp92II CATG 8 cut(s) 28, 64, 119, 131, 184, 343, 495, 856
HspAI GCGC 2 cut(s) 277, 713
Ksp22I TGATCA 2 cut(s) 510, 669
KspAI GTTAAC 1 cut(s) 22
Kzo9I GATC 4 cut(s) 313, 446, 510, 669
LmnI GCTCC 5 cut(s) 28, 163, 184, 594, 889
LweI GCATC 4 cut(s) 67, 555, 687, 757
MaeI CTAG 1 cut(s) 362
MaeIII GTNAC 2 cut(s) 422, 653
MalI GATC 4 cut(s) 315, 448, 512, 671
MboI GATC 4 cut(s) 313, 446, 510, 669
MboII GAAGA 7 cut(s) 56, 76, 79, 257, 262, 335, 442
MfeI CAATTG 1 cut(s) 924
MflI RGATCY 1 cut(s) 446
MhlI GDGCHC 2 cut(s) 168, 529
MluCI AATT 7 cut(s) 7, 88, 347, 460, 833, 875, 924
MlyI GAGTC 1 cut(s) 513
MmeI TCCRAC 2 cut(s) 318, 366
MroXI GAANNNNTTC 1 cut(s) 437
MseI TTAA 1 cut(s) 21
MspA1I CMGCKG 1 cut(s) 579
MspI CCGG 4 cut(s) 14, 503, 523, 540
MspR9I CCNGG 3 cut(s) 14, 524, 759
MunI CAATTG 1 cut(s) 924
Mva1269I GAATGC 1 cut(s) 821
MvaI CCWGG 1 cut(s) 759
MwoI GCNNNNNNNGC 2 cut(s) 625, 911
NciI CCSGG 2 cut(s) 14, 524
NcoI CCATGG 1 cut(s) 115
NdeII GATC 4 cut(s) 313, 446, 510, 669
NlaIII CATG 8 cut(s) 28, 64, 119, 131, 184, 343, 495, 856
NlaIV GGNNCC 5 cut(s) 448, 456, 469, 527, 891
NmeAIII GCCGAG 1 cut(s) 918
NmuCI GTSAC 1 cut(s) 653
PceI AGGCCT 2 cut(s) 219, 870
PcsI WCGNNNNNNNCGW 1 cut(s) 743
PctI GAATGC 1 cut(s) 821
PdmI GAANNNNTTC 1 cut(s) 437
PfeI GAWTC 3 cut(s) 224, 403, 920
PflFI GACNNNGTC 1 cut(s) 572
PflMI CCANNNNNTGG 1 cut(s) 464
PkrI GCNGC 1 cut(s) 581
PleI GAGTC 1 cut(s) 513
PpsI GAGTC 1 cut(s) 513
Psp6I CCWGG 1 cut(s) 757
PspEI GGTNACC 2 cut(s) 422, 653
PspGI CCWGG 1 cut(s) 757
PspN4I GGNNCC 5 cut(s) 448, 456, 469, 527, 891
PspOMI GGGCCC 1 cut(s) 525
PspPI GGNCC 5 cut(s) 455, 468, 505, 525, 526
PsuI RGATCY 1 cut(s) 446
PsyI GACNNNGTC 1 cut(s) 572
RsaI GTAC 1 cut(s) 686
RsaNI GTAC 1 cut(s) 685
SaqAI TTAA 1 cut(s) 21
SatI GCNGC 1 cut(s) 580
Sau3AI GATC 4 cut(s) 313, 446, 510, 669
Sau96I GGNCC 5 cut(s) 455, 468, 505, 525, 526
SchI GAGTC 1 cut(s) 513
ScrFI CCNGG 3 cut(s) 14, 524, 759
SduI GDGCHC 2 cut(s) 168, 529
SfaNI GCATC 4 cut(s) 67, 555, 687, 757
SfcI CTRYAG 1 cut(s) 169
SgrAI CRCCGGYG 1 cut(s) 539
SinI GGWCC 3 cut(s) 455, 468, 505
SmlI CTYRAG 2 cut(s) 593, 662
SmoI CTYRAG 2 cut(s) 593, 662
Sse9I AATT 7 cut(s) 7, 88, 347, 460, 833, 875, 924
SseBI AGGCCT 2 cut(s) 219, 870
SsiI CCGC 1 cut(s) 579
SspMI CTAG 1 cut(s) 362
StuI AGGCCT 2 cut(s) 219, 870
StyD4I CCNGG 3 cut(s) 12, 522, 757
StyI CCWWGG 3 cut(s) 115, 471, 885
TaaI ACNGT 4 cut(s) 41, 384, 704, 934
TaqI TCGA 4 cut(s) 222, 243, 318, 737
TasI AATT 7 cut(s) 7, 88, 347, 460, 833, 875, 924
TatI WGTACW 1 cut(s) 684
TauI GCSGC 1 cut(s) 582
TfiI GAWTC 3 cut(s) 224, 403, 920
Tru1I TTAA 1 cut(s) 21
Tru9I TTAA 1 cut(s) 21
TscAI CASTG 1 cut(s) 360
TseFI GTSAC 1 cut(s) 653
Tsp45I GTSAC 1 cut(s) 653
TspDTI ATGAA 4 cut(s) 77, 356, 869, 923
TspRI CASTG 1 cut(s) 360
Tth111I GACNNNGTC 1 cut(s) 572
Van91I CCANNNNNTGG 1 cut(s) 464
VpaK11BI GGWCC 3 cut(s) 455, 468, 505
XagI CCTNNNNNAGG 2 cut(s) 431, 512
XapI RAATTY 5 cut(s) 7, 347, 460, 833, 875
XmnI GAANNNNTTC 1 cut(s) 437
XspI CTAG 1 cut(s) 362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.