RLG00000016083

rRNA processing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000145
Physical Location & Seq
Reverse (-)
3779044 .. 3780335
1292 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016083

Sequence Viewer

Length: 1227 bp
ATGGAGAACCAGAACATCGAGTCCATGGAGATGGATAAGTCCGGCCCTTCTTCTTCGAAAGACGAGACCTCTTTCTCTGCGTTCTTCGCTGAAAAACGGCAACTAAAGTTGCAAGACCGCTCAGTAACAATCTCAAGGACCCCAACGACCAAGGGCCGAAACTTTTACGACAAGGCCAAGCGTGTCGTCGAGCTTCTTGCAACAACTCAAGTGCCACCGCATCTGGCACTGGAAGTATTGAACGGAAATTGGAGATTTCATACTCTAATTAAGACTGGGAATCAAGAAGGTGGGTTCTGCTCCAAGTTCGGCATCAGCCCGGACCAGTTTGCTAAACGAAGGGGCTGGCTTGCCGGATCCCTAGAGGCAGTTTCGGCACTGACGCTTTGTCATCTTTTTGTTAATGAAAACACTGCTGCTGCGGTGGGTTCGGCCGCTTCGGTATTAGAGTTTAGGAGGATTGTGGAAAACTGCATTGTTAGTGATGTGAATCCGGCAGAGTCTGACAACAAGATTAAAAAGTTTTTGAGTTATAAAAAGCACGTGCTGCAGAAACGTGGGGTGGATTACGCGGCAGTATTGGAGAAGTCTGGCATGAGTGAAGTGACATCTTTTGGTGCGTCCGTCGCTAAAGGTCGTAGTAGGAATAAAGAGGTGGACCAAGCCTGGCCTTTTGTGGAGTCGTTTTTAGAACATTATGGCATTTCATGCACATTGCATAGGGTTCTTCGTTCCATGAGGACCATGACATTTTCGAGTACCAGAGTGACCAAGGATCCAGATGTTATGGACAGTGTTGGTGCTCTTCTTGATGTTTTGGGAAGTACTAGTGTTCCGGGGTCGAAGGTGATACAGATATTGGACGGCCGCCTGCAGTATGAATTCATCAAGACCGGGTTTGCAAAGGGTGGGCTCTGCTCGAAATTTGATGGGATAGAGAAGGTGCTCGCTAGGAACAAGCAAAGATTGAAGCGCAACGCAAAGAACCTTGGAGACTTGTTGGTGTGTGATGTGTATATTGACAGAAGCAGTGTTGTTGTAGTGGGGAGTTGTGCGGCAGGGTTGAAGGAAATGAGGTCAATTGTGGAACGGTGTCTGGTTAAAAATGAAGACCCTGCAACAGCGGTGAGGAGGCTAAGATCGTGTAATAAGAAACAGGGTAGTTTGAGATTATCTGATGAGAAGCAGGTCAATTTGATGAAGAAGCTTGAGGGTCTGTGTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

409

Amino Acids

45.19

Weight (kDa)

9.48

Isoelectric Point (pI)

47.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_KRR1_2nd PF21800 108 - 176 3.2e-08 KRR1 small subunit processome component, second KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000145)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08420
fragaria_vesca FvH4_1g11160 FvH4_2g08143 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36460 FvH4_3g36460 FvH4_3g45301 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_5g09160 FvH4_5g09161 FvH4_5g09380 FvH4_5g22900 FvH4_6g42520 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550
malus_domestica MD02G1015700.v1.1 MD02G1058900.v1.1 MD02G1059000.v1.1 MD03G1170900.v1.1 MD04G1231500.v1.1 MD13G1044300.v1.1 MD16G1045100.v1.1
prunus_persica Prupe.1G308200_v2.0.a1 Prupe.2G125300_v2.0.a1 Prupe.6G307800_v2.0.a1 Prupe.6G351700_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1
pyrus_communis pycom02g01420 pycom02g04810 pycom03g12790 pycom03g12800 pycom12g17840 pycom12g17850 pycom12g17860 pycom13g03890 pycom16g03970
rosa_chinensis RchiOBHm_Chr2g0090081 RchiOBHm_Chr3g0469061 RchiOBHm_Chr3g0469081 RchiOBHm_Chr4g0435531 RchiOBHm_Chr5g0014021 RchiOBHm_Chr5g0014031 RchiOBHm_Chr5g0014041 RchiOBHm_Chr7g0190151 RchiOBHm_Chr7g0190161 RchiOBHm_Chr7g0190171 RchiOBHm_Chr7g0210441
rosa_laevigata RLG00000003683 RLG00000003687 RLG00000003688 RLG00000004561 RLG00000004643 RLG00000016083 RLG00000021085 RLG00000024381 RLG00000032065 RLG00000032067 RLG00000032071 RLG00000032072 RLG00000032075
rosa_multiflora Rmu_co8284349.1_g000001 Rmu_co8324735.1_g000001 Rmu_co8355915.1_g000001 Rmu_co8388905.1_g000001 Rmu_sc0000302.1_g000041 Rmu_sc0000302.1_g000050 Rmu_sc0001940.1_g000034 Rmu_sc0003807.1_g000011 Rmu_sc0005803.1_g000001 Rmu_sc0005803.1_g000007 Rmu_sc0007139.1_g000007 Rmu_sc0007767.1_g000001 Rmu_sc0007767.1_g000003 Rmu_sc0007767.1_g000006 Rmu_sc0007933.1_g000005 Rmu_sc0008587.1_g000004 Rmu_sc0008968.1_g000004 Rmu_sc0018491.1_g000002 Rmu_sc0022420.1_g000001 Rmu_sc0027700.1_g000001 Rmu_sc0036218.1_g000001
rosa_roxburghii Rroxscaffold_1G00062590 Rroxscaffold_1G00062600 Rroxscaffold_1G00062620 Rroxscaffold_1G00062630 Rroxscaffold_1G00062640 Rroxscaffold_1G00062670 Rroxscaffold_1G00062680 Rroxscaffold_2G00091430 Rroxscaffold_2G00151410 Rroxscaffold_3G00245340 Rroxscaffold_3G00255390 Rroxscaffold_3G00264820 Rroxscaffold_3G00264830 Rroxscaffold_3G00265870 Rroxscaffold_5G00355140 Rroxscaffold_5G00376760 Rroxscaffold_6G00412230
rosa_rugosa Rorug02G0005200 Rorug02G0468300 Rorug02G0468300 Rorug02G0532400 Rorug03G0098900 Rorug03G0099000 Rorug03G0099400 Rorug04G0286000 Rorug05G0014400 Rorug05G0014500 Rorug05G0014600 Rorug05G0014600 Rorug05G0014600 Rorug05G0014800 Rorug05G0014900 Rorug05G0015000 Rorug05G0015100 Rorug05G0015100 Rorug05G0441300 Rorug06G0495300 Rorug06G0502600 Rorug06G0502700 Rorug07G0062300
rosa_samantha Rh2AG050900 Rh2BG049600 Rh2CG051800 Rh2CG234600 Rh2DG051100 Rh3BG171300 Rh3BG171800 Rh3CG336700 Rh3DG203600 Rh3DG203800 Rh4AG341600 Rh4AG341700 Rh4BG349900 Rh4CG364600 Rh4DG344200 Rh5AG108800 Rh5AG108900 Rh5AG109000 Rh5AG109100 Rh5BG105500 Rh5CG117300 Rh5CG117500 Rh5CG117600 Rh5DG104200 Rh5DG104400 Rh5DG104500 Rh5DG104600 Rh7BG102300 Rh7BG110600 Rh7BG110700 Rh7BG118900 Rh7CG103600 Rh7CG112800 Rh7CG113000 Rh7CG200300 Rh7CG271100 Rh7DG111300 Rh7DG111400 Rh7DG194400 Rh7DG261800 Rh7DG261900
rosa_wichuraiana Rw0G014550 Rw0G014580 Rw2G004580 Rw3G013980 Rw3G013990 Rw3G014000 Rw3G014020 Rw4G029810 Rw5G009500 Rw5G009510 Rw5G009520 Rw5G009530 Rw7G008640 Rw7G009350 Rw7G021680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 534
Acc36I ACCTGC 1 cut(s) 1177
AccBSI CCGCTC 1 cut(s) 120
AccII CGCG 1 cut(s) 572
AciI CCGC 8 cut(s) 118, 218, 422, 435, 572, 868, 1055, 1124
AclWI GGATC 4 cut(s) 351, 364, 770, 783
AcoI YGGCCR 2 cut(s) 432, 865
AcsI RAATTY 2 cut(s) 881, 923
AcvI CACGTG 1 cut(s) 544
AfaI GTAC 2 cut(s) 760, 826
AgsI TTSAA 3 cut(s) 241, 970, 1066
AhdI GACNNNNNGTC 1 cut(s) 387
AhlI ACTAGT 1 cut(s) 827
AjnI CCWGG 1 cut(s) 665
AloI GAACNNNNNNTCC 1 cut(s) 37
AluBI AGCT 2 cut(s) 193, 1207
AluI AGCT 2 cut(s) 193, 1207
Alw21I GWGCWC 2 cut(s) 805, 948
Alw26I GTCTC 2 cut(s) 59, 987
AlwI GGATC 4 cut(s) 351, 364, 770, 783
AlwNI CAGNNNCTG 1 cut(s) 503
AoxI GGCC 6 cut(s) 43, 154, 174, 432, 668, 865
ApeKI GCWGC 3 cut(s) 416, 419, 547
ApoI RAATTY 2 cut(s) 881, 923
AspLEI GCGC 1 cut(s) 975
AspS9I GGNCC 6 cut(s) 44, 138, 154, 322, 658, 741
AsuC2I CCSGG 3 cut(s) 320, 837, 895
AsuHPI GGTGA 2 cut(s) 859, 1138
AsuII TTCGAA 1 cut(s) 56
AvaII GGWCC 4 cut(s) 138, 322, 658, 741
BamHI GGATCC 2 cut(s) 356, 775
BanII GRGCYC 1 cut(s) 915
BbrPI CACGTG 1 cut(s) 544
BbsI GAAGAC 1 cut(s) 1116
Bbv12I GWGCWC 2 cut(s) 805, 948
BbvI GCAGC 3 cut(s) 403, 406, 534
BccI CCATC 2 cut(s) 25, 923
BceAI ACGGC 2 cut(s) 113, 880
BcgI CGANNNNNNTGC 2 cut(s) 179, 213
BciT130I CCWGG 1 cut(s) 667
BcnI CCSGG 3 cut(s) 320, 837, 895
BcoDI GTCTC 2 cut(s) 59, 987
BcuI ACTAGT 1 cut(s) 827
BfaI CTAG 3 cut(s) 362, 828, 951
BfmI CTRYAG 2 cut(s) 548, 872
BfuAI ACCTGC 1 cut(s) 1177
BisI GCNGC 7 cut(s) 417, 420, 435, 548, 573, 868, 1056
BlsI GCNGC 7 cut(s) 418, 421, 436, 549, 574, 869, 1057
BmcAI AGTACT 1 cut(s) 826
Bme1390I CCNGG 4 cut(s) 320, 667, 837, 895
Bme18I GGWCC 4 cut(s) 138, 322, 658, 741
BmeRI GACNNNNNGTC 1 cut(s) 387
BmgT120I GGNCC 6 cut(s) 44, 138, 154, 322, 658, 741
BmiI GGNNCC 3 cut(s) 140, 358, 777
BmrFI CCNGG 4 cut(s) 320, 667, 837, 895
BmrI ACTGGG 1 cut(s) 285
BmsI GCATC 2 cut(s) 229, 321
BmuI ACTGGG 1 cut(s) 285
BpiI GAAGAC 1 cut(s) 1116
Bpu14I TTCGAA 1 cut(s) 56
BpuEI CTTGAG 2 cut(s) 118, 192
BpuMI CCSGG 3 cut(s) 320, 837, 895
BsaAI YACGTR 1 cut(s) 544
BsaBI GATNNNNATC 1 cut(s) 489
BsaI GGTCTC 1 cut(s) 59
BsaJI CCNNGG 5 cut(s) 24, 150, 771, 836, 988
Bse1I ACTGG 3 cut(s) 234, 280, 325
Bse3DI GCAATG 1 cut(s) 713
Bse8I GATNNNNATC 1 cut(s) 489
BseBI CCWGG 1 cut(s) 667
BseDI CCNNGG 5 cut(s) 24, 150, 771, 836, 988
BseJI GATNNNNATC 1 cut(s) 489
BseMI GCAATG 1 cut(s) 713
BseMII CTCAG 1 cut(s) 135
BseNI ACTGG 3 cut(s) 234, 280, 325
BseRI GAGGAG 1 cut(s) 1144
BseX3I CGGCCG 2 cut(s) 432, 865
BseXI GCAGC 3 cut(s) 403, 406, 534
Bsh1236I CGCG 1 cut(s) 572
Bsh1285I CGRYCG 2 cut(s) 435, 868
BshFI GGCC 6 cut(s) 45, 156, 176, 434, 670, 867
BsiEI CGRYCG 2 cut(s) 435, 868
BsiHKAI GWGCWC 2 cut(s) 805, 948
BsiSI CCGG 6 cut(s) 42, 320, 354, 494, 836, 894
BsmAI GTCTC 2 cut(s) 59, 987
BsnI GGCC 6 cut(s) 45, 156, 176, 434, 670, 867
Bso31I GGTCTC 1 cut(s) 59
Bsp119I TTCGAA 1 cut(s) 56
Bsp1286I GDGCHC 3 cut(s) 805, 915, 948
Bsp143I GATC 3 cut(s) 356, 775, 1139
Bsp19I CCATGG 1 cut(s) 24
BspACI CCGC 8 cut(s) 118, 218, 422, 435, 572, 868, 1055, 1124
BspANI GGCC 6 cut(s) 45, 156, 176, 434, 670, 867
BspCNI CTCAG 1 cut(s) 134
BspFNI CGCG 1 cut(s) 572
BspLI GGNNCC 3 cut(s) 140, 358, 777
BspMAI CTGCAG 2 cut(s) 552, 876
BspMI ACCTGC 1 cut(s) 1177
BspPI GGATC 4 cut(s) 351, 364, 770, 783
BspQI GCTCTTC 1 cut(s) 810
BspT104I TTCGAA 1 cut(s) 56
BspTNI GGTCTC 1 cut(s) 59
BsrBI CCGCTC 1 cut(s) 120
BsrDI GCAATG 1 cut(s) 713
BsrI ACTGG 3 cut(s) 234, 280, 325
BssECI CCNNGG 5 cut(s) 24, 150, 771, 836, 988
BssMI GATC 3 cut(s) 356, 775, 1139
BssT1I CCWWGG 4 cut(s) 24, 150, 771, 988
Bst2UI CCWGG 1 cut(s) 667
Bst4CI ACNGT 2 cut(s) 794, 1092
Bst6I CTCTTC 1 cut(s) 810
BstAPI GCANNNNNTGC 2 cut(s) 547, 708
BstBAI YACGTR 1 cut(s) 544
BstBI TTCGAA 1 cut(s) 56
BstC8I GCNNGC 4 cut(s) 347, 351, 872, 948
BstDEI CTNAG 2 cut(s) 121, 1136
BstDSI CCRYGG 1 cut(s) 24
BstFNI CGCG 1 cut(s) 572
BstHHI GCGC 1 cut(s) 975
BstKTI GATC 3 cut(s) 359, 778, 1142
BstMAI GTCTC 2 cut(s) 59, 987
BstMBI GATC 3 cut(s) 356, 775, 1139
BstMCI CGRYCG 2 cut(s) 435, 868
BstMWI GCNNNNNNNGC 5 cut(s) 86, 374, 547, 626, 708
BstNI CCWGG 1 cut(s) 667
BstSCI CCNGG 4 cut(s) 318, 665, 835, 893
BstSFI CTRYAG 2 cut(s) 548, 872
BstUI CGCG 1 cut(s) 572
BstV1I GCAGC 3 cut(s) 403, 406, 534
BstV2I GAAGAC 1 cut(s) 1116
BstX2I RGATCY 2 cut(s) 356, 775
BstXI CCANNNNNNTGG 1 cut(s) 31
BstYI RGATCY 2 cut(s) 356, 775
BstZI CGGCCG 2 cut(s) 432, 865
BsuRI GGCC 6 cut(s) 45, 156, 176, 434, 670, 867
BtgI CCRYGG 1 cut(s) 24
BtsI GCAGTG 2 cut(s) 411, 1036
BtsIMutI CAGTG 5 cut(s) 227, 377, 411, 799, 1036
BveI ACCTGC 1 cut(s) 1177
Cac8I GCNNGC 4 cut(s) 347, 351, 872, 948
CaiI CAGNNNCTG 1 cut(s) 503
CfoI GCGC 1 cut(s) 975
Cfr13I GGNCC 6 cut(s) 44, 138, 154, 322, 658, 741
CseI GACGC 2 cut(s) 391, 609
Csp6I GTAC 2 cut(s) 759, 825
CviAII CATG 5 cut(s) 25, 595, 708, 736, 745
CviQI GTAC 2 cut(s) 759, 825
DdeI CTNAG 2 cut(s) 121, 1136
DpnI GATC 3 cut(s) 358, 777, 1141
DpnII GATC 3 cut(s) 356, 775, 1139
DriI GACNNNNNGTC 1 cut(s) 387
EaeI YGGCCR 2 cut(s) 432, 865
EagI CGGCCG 2 cut(s) 432, 865
Eam1104I CTCTTC 1 cut(s) 810
Eam1105I GACNNNNNGTC 1 cut(s) 387
EarI CTCTTC 1 cut(s) 810
EclXI CGGCCG 2 cut(s) 432, 865
Eco130I CCWWGG 4 cut(s) 24, 150, 771, 988
Eco24I GRGCYC 1 cut(s) 915
Eco31I GGTCTC 1 cut(s) 59
Eco47I GGWCC 4 cut(s) 138, 322, 658, 741
Eco52I CGGCCG 2 cut(s) 432, 865
Eco72I CACGTG 1 cut(s) 544
EcoO109I RGGNCCY 1 cut(s) 138
EcoRI GAATTC 1 cut(s) 881
EcoRII CCWGG 1 cut(s) 665
EcoT14I CCWWGG 4 cut(s) 24, 150, 771, 988
EcoT38I GRGCYC 1 cut(s) 915
ErhI CCWWGG 4 cut(s) 24, 150, 771, 988
FaeI CATG 5 cut(s) 28, 598, 711, 739, 748
FatI CATG 5 cut(s) 24, 594, 707, 735, 744
Fnu4HI GCNGC 7 cut(s) 417, 420, 435, 548, 573, 868, 1056
FriOI GRGCYC 1 cut(s) 915
Fsp4HI GCNGC 7 cut(s) 417, 420, 435, 548, 573, 868, 1056
FspBI CTAG 3 cut(s) 362, 828, 951
GlaI GCGC 1 cut(s) 974
GluI GCNGC 7 cut(s) 417, 420, 435, 548, 573, 868, 1056
HaeIII GGCC 6 cut(s) 45, 156, 176, 434, 670, 867
HapII CCGG 6 cut(s) 42, 320, 354, 494, 836, 894
HgaI GACGC 2 cut(s) 391, 609
HhaI GCGC 1 cut(s) 975
Hin1II CATG 5 cut(s) 28, 598, 711, 739, 748
Hin6I GCGC 1 cut(s) 973
HinP1I GCGC 1 cut(s) 973
HindIII AAGCTT 1 cut(s) 1205
HinfI GANTC 5 cut(s) 20, 280, 490, 500, 680
HpaII CCGG 6 cut(s) 42, 320, 354, 494, 836, 894
HphI GGTGA 2 cut(s) 859, 1138
Hpy166II GTNNAC 1 cut(s) 658
Hpy188I TCNGA 2 cut(s) 505, 1177
Hpy188III TCNNGA 4 cut(s) 284, 779, 809, 889
Hpy8I GTNNAC 1 cut(s) 658
Hpy99I CGWCG 2 cut(s) 191, 629
HpyAV CCTTC 6 cut(s) 57, 281, 333, 838, 934, 1060
HpyCH4III ACNGT 2 cut(s) 794, 1092
HpyCH4IV ACGT 2 cut(s) 543, 556
HpyCH4V TGCA 9 cut(s) 112, 200, 474, 550, 711, 718, 874, 902, 1118
HpyF10VI GCNNNNNNNGC 5 cut(s) 86, 374, 547, 626, 708
HpyF3I CTNAG 2 cut(s) 121, 1136
HpySE526I ACGT 2 cut(s) 543, 556
Hsp92II CATG 5 cut(s) 28, 598, 711, 739, 748
HspAI GCGC 1 cut(s) 973
Kzo9I GATC 3 cut(s) 356, 775, 1139
LguI GCTCTTC 1 cut(s) 810
LmnI GCTCC 1 cut(s) 305
Lsp1109I GCAGC 3 cut(s) 403, 406, 534
LweI GCATC 2 cut(s) 229, 321
MaeI CTAG 3 cut(s) 362, 828, 951
MaeII ACGT 2 cut(s) 543, 556
MaeIII GTNAC 3 cut(s) 124, 604, 766
MalI GATC 3 cut(s) 358, 777, 1141
MbiI CCGCTC 1 cut(s) 120
MboI GATC 3 cut(s) 356, 775, 1139
MboII GAAGA 7 cut(s) 42, 45, 76, 719, 797, 1121, 1213
MfeI CAATTG 1 cut(s) 1080
MflI RGATCY 2 cut(s) 356, 775
MhlI GDGCHC 3 cut(s) 805, 915, 948
MluCI AATT 6 cut(s) 247, 267, 881, 923, 1080, 1192
MlyI GAGTC 3 cut(s) 29, 509, 689
MnlI CCTC 9 cut(s) 79, 358, 450, 646, 732, 1068, 1122, 1125, 1204
MseI TTAA 4 cut(s) 270, 402, 516, 1101
MslI CAYNNNNRTG 1 cut(s) 29
MspA1I CMGCKG 1 cut(s) 1124
MspI CCGG 6 cut(s) 42, 320, 354, 494, 836, 894
MspR9I CCNGG 4 cut(s) 320, 667, 837, 895
MunI CAATTG 1 cut(s) 1080
MvaI CCWGG 1 cut(s) 667
MvnI CGCG 1 cut(s) 572
MwoI GCNNNNNNNGC 5 cut(s) 86, 374, 547, 626, 708
NciI CCSGG 3 cut(s) 320, 837, 895
NcoI CCATGG 1 cut(s) 24
NdeII GATC 3 cut(s) 356, 775, 1139
NlaIII CATG 5 cut(s) 28, 598, 711, 739, 748
NlaIV GGNNCC 3 cut(s) 140, 358, 777
NmuCI GTSAC 2 cut(s) 604, 766
NspV TTCGAA 1 cut(s) 56
PciSI GCTCTTC 1 cut(s) 810
PfeI GAWTC 2 cut(s) 280, 490
PkrI GCNGC 7 cut(s) 418, 421, 436, 549, 574, 869, 1057
PleI GAGTC 3 cut(s) 28, 508, 688
PmaCI CACGTG 1 cut(s) 544
PmlI CACGTG 1 cut(s) 544
PpsI GAGTC 3 cut(s) 28, 508, 688
Ppu21I YACGTR 1 cut(s) 544
PpuMI RGGWCCY 1 cut(s) 138
PsiI TTATAA 1 cut(s) 534
Psp5II RGGWCCY 1 cut(s) 138
Psp6I CCWGG 1 cut(s) 665
PspCI CACGTG 1 cut(s) 544
PspGI CCWGG 1 cut(s) 665
PspN4I GGNNCC 3 cut(s) 140, 358, 777
PspPI GGNCC 6 cut(s) 44, 138, 154, 322, 658, 741
PspPPI RGGWCCY 1 cut(s) 138
PstI CTGCAG 2 cut(s) 552, 876
PstNI CAGNNNCTG 1 cut(s) 503
PsuI RGATCY 2 cut(s) 356, 775
RsaI GTAC 2 cut(s) 760, 826
RsaNI GTAC 2 cut(s) 759, 825
RseI CAYNNNNRTG 1 cut(s) 29
SapI GCTCTTC 1 cut(s) 810
SaqAI TTAA 4 cut(s) 270, 402, 516, 1101
SatI GCNGC 7 cut(s) 417, 420, 435, 548, 573, 868, 1056
Sau3AI GATC 3 cut(s) 356, 775, 1139
Sau96I GGNCC 6 cut(s) 44, 138, 154, 322, 658, 741
ScaI AGTACT 1 cut(s) 826
SchI GAGTC 3 cut(s) 29, 509, 689
ScrFI CCNGG 4 cut(s) 320, 667, 837, 895
SduI GDGCHC 3 cut(s) 805, 915, 948
SfaNI GCATC 2 cut(s) 229, 321
SfcI CTRYAG 2 cut(s) 548, 872
SfuI TTCGAA 1 cut(s) 56
SinI GGWCC 4 cut(s) 138, 322, 658, 741
SmiMI CAYNNNNRTG 1 cut(s) 29
SmlI CTYRAG 3 cut(s) 133, 207, 1208
SmoI CTYRAG 3 cut(s) 133, 207, 1208
SpeI ACTAGT 1 cut(s) 827
Sse9I AATT 6 cut(s) 247, 267, 881, 923, 1080, 1192
SsiI CCGC 8 cut(s) 118, 218, 422, 435, 572, 868, 1055, 1124
SspMI CTAG 3 cut(s) 362, 828, 951
StyD4I CCNGG 4 cut(s) 318, 665, 835, 893
StyI CCWWGG 4 cut(s) 24, 150, 771, 988
TaaI ACNGT 2 cut(s) 794, 1092
TaiI ACGT 2 cut(s) 546, 559
TaqI TCGA 6 cut(s) 18, 56, 189, 755, 842, 920
TasI AATT 6 cut(s) 247, 267, 881, 923, 1080, 1192
TatI WGTACW 1 cut(s) 824
TauI GCSGC 4 cut(s) 437, 575, 870, 1058
TfiI GAWTC 2 cut(s) 280, 490
Tru1I TTAA 4 cut(s) 270, 402, 516, 1101
Tru9I TTAA 4 cut(s) 270, 402, 516, 1101
TscAI CASTG 5 cut(s) 234, 384, 418, 799, 1036
TseFI GTSAC 2 cut(s) 604, 766
TseI GCWGC 3 cut(s) 416, 419, 547
Tsp45I GTSAC 2 cut(s) 604, 766
TspDTI ATGAA 7 cut(s) 248, 420, 696, 874, 894, 1122, 1214
TspGWI ACGGA 2 cut(s) 258, 613
TspRI CASTG 5 cut(s) 234, 384, 418, 799, 1036
VpaK11BI GGWCC 4 cut(s) 138, 322, 658, 741
XapI RAATTY 2 cut(s) 881, 923
XspI CTAG 3 cut(s) 362, 828, 951
ZrmI AGTACT 1 cut(s) 826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.