MD03G1170900.v1.1

rRNA processing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000145
Physical Location & Seq
Forward (+)
23210056 .. 23213815
3760 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1170900.v1.1.491

Sequence Viewer

Length: 1476 bp
ATGGATGCTCACGGCGAGCGCCTCCAAACCCAGCTCAACGGCCTCAGCCATGGGGTGGCTGGTTTGAGAACCAGTTTAAGCAACCTGAAAGATCATCTACTCGTCACCGCCACCGAAAATCAAACATTTCTAAAAAAAACCATCACAAATCTACTCACCGGGATCGAAGATTGCTTGAGCGGATACGGTAAGCCTCCAAGCGAACGGGCCACGTATACGGAGGAATTCATGGAAGAAACCAATTTGGAATGGTATAAGACCTTGCCCATCCTTCCGAAGTTTGCAAAAAGGCTAGACGGATATGACAATCAATTGAAATCGTCTTTGGAGGGTCAAGGCATAAACTGGAAAGTAGATTATCGTCAGGTCCCTCATTCCATGACAGTTTCAACAAACAGTGGGGACCCACATATTACTAACAAGGCTTGTCAAATTCTTAAACTCTTGGCATATACTACCGTTGACCCATCACTGATATTAGAGATAGTTGATGGAAGCATGCAACATGTTAACATTGGATTTCTTGATCTGAACAAAAAATTTAAAATTGAGAAGGTAAAATTGAAATGGGACGAACTTTCCAGGCGCTCCATCAAGAAAATGGGCAAGATGACGCGGTGTAAACTTTTCCTTTACAATTGCACGCTCACTGCTGTGGGTACATCTGATGGATCGGAGATGCTGAGGACAATGGTGGAAGGCATCTTTCTCCATGGTGTTGATCTTGCACAGACTGTGAAGATTGAATGTAAGGAATCAAACGATACTGTCGAGAAGAGTCTTGCAGAAAGTAGCATGTGGGCCTCTTTCACTGTATACTATGGTGAAGACAGGGCAAAAATGGTGCAAGATGCTTGGCCTATGGTGAAATCGTTTTTACAGGAGAACGGCATTTCATGCGAATTGAGTGCGCGTAACCGTTCCATGAAAGTCTCAACAACCACAGAGATCAAGGACCGAGATCGTATTGTCAGGGCCAGGCGTCTTCTTGAACTGCTAGGAAAAACTAACGTTCCACCTTCCCTTGCGATAGAAATTATGAACGGTCGTAAGCAGCATATCTTGATGAAGATTGGGCAGCAAGAAGGTGGGCTATGCTCAAGGTTTGGGATCGAGAAGGTGGAGTACGAAGATCGGCTCCGGAGATTTCGTGCCTCTATAGAGGAGATCATTGGCTTGACAGGCACCAATCTTTATCACTATCAAGACACTGTTACTCTTGTTGGGGGCGCTGTCGGTCAATCTGAAGACTTGGAGATGGCGAGGATTTTGGTGGAAGGCTATATAGTTCATAATGTTGAGAGTGATTGCGTCACAAAGCTGAAGCTGATGAAGTCTGAAAAAAGAAAAGATAGAGAAGGAGAAGACGCTCTGGCAACTTGTCCAAGAAAGAAAAAAACAAAAACTGAAGATGTGAGTGCTTCATGGAGTGAAGAACATGCACACGACGAGGGCAGCGTCTTGATATTTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

492

Amino Acids

55.46

Weight (kDa)

7.18

Isoelectric Point (pI)

40.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_KRR1_1st PF17903 269 - 344 6.3e-09 Krr1 KH1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000145)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08420
fragaria_vesca FvH4_1g11160 FvH4_2g08143 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36450 FvH4_3g36460 FvH4_3g36460 FvH4_3g45301 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_4g27690 FvH4_5g09160 FvH4_5g09161 FvH4_5g09380 FvH4_5g22900 FvH4_6g42520 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550 FvH4_6g42550
malus_domestica MD02G1015700.v1.1 MD02G1058900.v1.1 MD02G1059000.v1.1 MD03G1170900.v1.1 MD04G1231500.v1.1 MD13G1044300.v1.1 MD16G1045100.v1.1
prunus_persica Prupe.1G308200_v2.0.a1 Prupe.2G125300_v2.0.a1 Prupe.6G307800_v2.0.a1 Prupe.6G351700_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1 Prupe.6G351800_v2.0.a1
pyrus_communis pycom02g01420 pycom02g04810 pycom03g12790 pycom03g12800 pycom12g17840 pycom12g17850 pycom12g17860 pycom13g03890 pycom16g03970
rosa_chinensis RchiOBHm_Chr2g0090081 RchiOBHm_Chr3g0469061 RchiOBHm_Chr3g0469081 RchiOBHm_Chr4g0435531 RchiOBHm_Chr5g0014021 RchiOBHm_Chr5g0014031 RchiOBHm_Chr5g0014041 RchiOBHm_Chr7g0190151 RchiOBHm_Chr7g0190161 RchiOBHm_Chr7g0190171 RchiOBHm_Chr7g0210441
rosa_laevigata RLG00000003683 RLG00000003687 RLG00000003688 RLG00000004561 RLG00000004643 RLG00000016083 RLG00000021085 RLG00000024381 RLG00000032065 RLG00000032067 RLG00000032071 RLG00000032072 RLG00000032075
rosa_multiflora Rmu_co8284349.1_g000001 Rmu_co8324735.1_g000001 Rmu_co8355915.1_g000001 Rmu_co8388905.1_g000001 Rmu_sc0000302.1_g000041 Rmu_sc0000302.1_g000050 Rmu_sc0001940.1_g000034 Rmu_sc0003807.1_g000011 Rmu_sc0005803.1_g000001 Rmu_sc0005803.1_g000007 Rmu_sc0007139.1_g000007 Rmu_sc0007767.1_g000001 Rmu_sc0007767.1_g000003 Rmu_sc0007767.1_g000006 Rmu_sc0007933.1_g000005 Rmu_sc0008587.1_g000004 Rmu_sc0008968.1_g000004 Rmu_sc0018491.1_g000002 Rmu_sc0022420.1_g000001 Rmu_sc0027700.1_g000001 Rmu_sc0036218.1_g000001
rosa_roxburghii Rroxscaffold_1G00062590 Rroxscaffold_1G00062600 Rroxscaffold_1G00062620 Rroxscaffold_1G00062630 Rroxscaffold_1G00062640 Rroxscaffold_1G00062670 Rroxscaffold_1G00062680 Rroxscaffold_2G00091430 Rroxscaffold_2G00151410 Rroxscaffold_3G00245340 Rroxscaffold_3G00255390 Rroxscaffold_3G00264820 Rroxscaffold_3G00264830 Rroxscaffold_3G00265870 Rroxscaffold_5G00355140 Rroxscaffold_5G00376760 Rroxscaffold_6G00412230
rosa_rugosa Rorug02G0005200 Rorug02G0468300 Rorug02G0468300 Rorug02G0532400 Rorug03G0098900 Rorug03G0099000 Rorug03G0099400 Rorug04G0286000 Rorug05G0014400 Rorug05G0014500 Rorug05G0014600 Rorug05G0014600 Rorug05G0014600 Rorug05G0014800 Rorug05G0014900 Rorug05G0015000 Rorug05G0015100 Rorug05G0015100 Rorug05G0441300 Rorug06G0495300 Rorug06G0502600 Rorug06G0502700 Rorug07G0062300
rosa_samantha Rh2AG050900 Rh2BG049600 Rh2CG051800 Rh2CG234600 Rh2DG051100 Rh3BG171300 Rh3BG171800 Rh3CG336700 Rh3DG203600 Rh3DG203800 Rh4AG341600 Rh4AG341700 Rh4BG349900 Rh4CG364600 Rh4DG344200 Rh5AG108800 Rh5AG108900 Rh5AG109000 Rh5AG109100 Rh5BG105500 Rh5CG117300 Rh5CG117500 Rh5CG117600 Rh5DG104200 Rh5DG104400 Rh5DG104500 Rh5DG104600 Rh7BG102300 Rh7BG110600 Rh7BG110700 Rh7BG118900 Rh7CG103600 Rh7CG112800 Rh7CG113000 Rh7CG200300 Rh7CG271100 Rh7DG111300 Rh7DG111400 Rh7DG194400 Rh7DG261800 Rh7DG261900
rosa_wichuraiana Rw0G014550 Rw0G014580 Rw2G004580 Rw3G013980 Rw3G013990 Rw3G014000 Rw3G014020 Rw4G029810 Rw5G009500 Rw5G009510 Rw5G009520 Rw5G009530 Rw7G008640 Rw7G009350 Rw7G021680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1184
AccB7I CCANNNNNTGG 1 cut(s) 55
AccBSI CCGCTC 1 cut(s) 180
AccI GTMKAC 2 cut(s) 215, 816
AccII CGCG 2 cut(s) 616, 913
AccIII TCCGGA 1 cut(s) 1140
AciI CCGC 3 cut(s) 108, 180, 616
AclI AACGTT 1 cut(s) 1011
AclWI GGATC 3 cut(s) 170, 679, 1118
AcsI RAATTY 3 cut(s) 224, 432, 539
AcuI CTGAAG 3 cut(s) 1266, 1343, 1428
AcyI GRCGYC 1 cut(s) 982
AfaI GTAC 2 cut(s) 661, 1127
AfiI CCNNNNNNNGG 1 cut(s) 55
AflIII ACRYGT 1 cut(s) 505
AgsI TTSAA 5 cut(s) 316, 390, 565, 746, 992
AjnI CCWGG 2 cut(s) 581, 977
AjuI GAANNNNNNNTTGG 2 cut(s) 308, 340
AleI CACNNNNGTG 1 cut(s) 653
AluBI AGCT 3 cut(s) 34, 1321, 1327
AluI AGCT 3 cut(s) 34, 1321, 1327
Alw26I GTCTC 1 cut(s) 937
AlwI GGATC 3 cut(s) 170, 679, 1118
Aor13HI TCCGGA 1 cut(s) 1140
AoxI GGCC 5 cut(s) 40, 207, 801, 857, 975
ApeKI GCWGC 3 cut(s) 1054, 1078, 1455
ApoI RAATTY 3 cut(s) 224, 432, 539
AspLEI GCGC 4 cut(s) 21, 588, 913, 1232
AspS9I GGNCC 6 cut(s) 207, 367, 403, 801, 955, 975
AsuC2I CCSGG 1 cut(s) 160
AsuHPI GGTGA 4 cut(s) 97, 148, 836, 877
AvaII GGWCC 3 cut(s) 367, 403, 955
BanI GGYRCC 1 cut(s) 1184
BarI GAAGNNNNNNTAC 2 cut(s) 1109, 1141
BbsI GAAGAC 4 cut(s) 834, 977, 1254, 1371
BbvCI CCTCAGC 2 cut(s) 44, 683
BbvI GCAGC 3 cut(s) 1066, 1090, 1467
BccI CCATC 7 cut(s) 149, 275, 475, 485, 599, 662, 1252
BceAI ACGGC 3 cut(s) 28, 55, 904
BcgI CGANNNNNNTGC 2 cut(s) 890, 924
BciT130I CCWGG 2 cut(s) 583, 979
BciVI GTATCC 1 cut(s) 176
BcnI CCSGG 1 cut(s) 160
BcoDI GTCTC 1 cut(s) 937
BfaI CTAG 2 cut(s) 293, 998
BfmI CTRYAG 1 cut(s) 1158
BfoI RGCGCY 3 cut(s) 22, 589, 1233
BfuI GTATCC 1 cut(s) 176
BisI GCNGC 3 cut(s) 1055, 1079, 1456
BlsI GCNGC 3 cut(s) 1056, 1080, 1457
Bme1390I CCNGG 3 cut(s) 160, 583, 979
Bme18I GGWCC 3 cut(s) 367, 403, 955
BmgT120I GGNCC 6 cut(s) 207, 367, 403, 801, 955, 975
BmiI GGNNCC 5 cut(s) 369, 404, 405, 1139, 1186
BmrFI CCNGG 3 cut(s) 160, 583, 979
BmsI GCATC 3 cut(s) 669, 711, 841
BpiI GAAGAC 4 cut(s) 834, 977, 1254, 1371
Bpu10I CCTNAGC 2 cut(s) 44, 683
BpuEI CTTGAG 2 cut(s) 196, 1084
BpuMI CCSGG 1 cut(s) 160
BsaAI YACGTR 1 cut(s) 213
BsaHI GRCGYC 1 cut(s) 982
BsaJI CCNNGG 2 cut(s) 49, 712
BsaWI WCCGGW 1 cut(s) 1140
BsaXI ACNNNNNCTCC 2 cut(s) 1135, 1165
Bsc4I CCNNNNNNNGG 1 cut(s) 55
Bse1I ACTGG 2 cut(s) 72, 350
BseAI TCCGGA 1 cut(s) 1140
BseBI CCWGG 2 cut(s) 583, 979
BseDI CCNNGG 2 cut(s) 49, 712
BseGI GGATG 2 cut(s) 10, 267
BseLI CCNNNNNNNGG 1 cut(s) 55
BseMII CTCAG 2 cut(s) 58, 674
BseNI ACTGG 2 cut(s) 72, 350
BseRI GAGGAG 1 cut(s) 1178
BseXI GCAGC 3 cut(s) 1066, 1090, 1467
BseYI CCCAGC 1 cut(s) 30
Bsh1236I CGCG 2 cut(s) 616, 913
Bsh1285I CGRYCG 1 cut(s) 1048
BshFI GGCC 5 cut(s) 42, 209, 803, 859, 977
BshNI GGYRCC 1 cut(s) 1184
BsiEI CGRYCG 1 cut(s) 1048
BsiSI CCGG 2 cut(s) 159, 1141
BslFI GGGAC 3 cut(s) 353, 416, 584
BslI CCNNNNNNNGG 1 cut(s) 55
BsmAI GTCTC 1 cut(s) 937
BsmFI GGGAC 3 cut(s) 353, 416, 584
BsnI GGCC 5 cut(s) 42, 209, 803, 859, 977
Bsp13I TCCGGA 1 cut(s) 1140
Bsp19I CCATGG 2 cut(s) 49, 712
BspACI CCGC 3 cut(s) 108, 180, 616
BspANI GGCC 5 cut(s) 42, 209, 803, 859, 977
BspCNI CTCAG 2 cut(s) 57, 675
BspEI TCCGGA 1 cut(s) 1140
BspFNI CGCG 2 cut(s) 616, 913
BspLI GGNNCC 5 cut(s) 369, 404, 405, 1139, 1186
BspPI GGATC 3 cut(s) 170, 679, 1118
BspT107I GGYRCC 1 cut(s) 1184
BsrBI CCGCTC 1 cut(s) 180
BsrI ACTGG 2 cut(s) 72, 350
BssECI CCNNGG 2 cut(s) 49, 712
BssNAI GTATAC 2 cut(s) 216, 817
BssNI GRCGYC 1 cut(s) 982
BssT1I CCWWGG 2 cut(s) 49, 712
Bst1107I GTATAC 2 cut(s) 216, 817
Bst2UI CCWGG 2 cut(s) 583, 979
Bst6I CTCTTC 1 cut(s) 770
BstACI GRCGYC 1 cut(s) 982
BstAPI GCANNNNNTGC 1 cut(s) 897
BstBAI YACGTR 1 cut(s) 213
BstC8I GCNNGC 3 cut(s) 17, 500, 644
BstDEI CTNAG 2 cut(s) 44, 683
BstDSI CCRYGG 2 cut(s) 49, 712
BstF5I GGATG 2 cut(s) 10, 267
BstFNI CGCG 2 cut(s) 616, 913
BstH2I RGCGCY 3 cut(s) 22, 589, 1233
BstHHI GCGC 4 cut(s) 21, 588, 913, 1232
BstMAI GTCTC 1 cut(s) 937
BstMCI CGRYCG 1 cut(s) 1048
BstMWI GCNNNNNNNGC 2 cut(s) 897, 1182
BstNI CCWGG 2 cut(s) 583, 979
BstNSI RCATGY 4 cut(s) 502, 509, 799, 1442
BstSCI CCNGG 3 cut(s) 158, 581, 977
BstSFI CTRYAG 1 cut(s) 1158
BstUI CGCG 2 cut(s) 616, 913
BstV1I GCAGC 3 cut(s) 1066, 1090, 1467
BstV2I GAAGAC 4 cut(s) 834, 977, 1254, 1371
BstZ17I GTATAC 2 cut(s) 216, 817
BsuI GTATCC 1 cut(s) 176
BsuRI GGCC 5 cut(s) 42, 209, 803, 859, 977
BtgI CCRYGG 2 cut(s) 49, 712
BtsCI GGATG 2 cut(s) 10, 267
BtsI GCAGTG 1 cut(s) 648
BtsIMutI CAGTG 5 cut(s) 403, 470, 648, 810, 1209
Cac8I GCNNGC 3 cut(s) 17, 500, 644
CfoI GCGC 4 cut(s) 21, 588, 913, 1232
Cfr13I GGNCC 6 cut(s) 207, 367, 403, 801, 955, 975
CseI GACGC 5 cut(s) 622, 971, 1300, 1376, 1447
Csp6I GTAC 2 cut(s) 660, 1126
CviQI GTAC 2 cut(s) 660, 1126
DdeI CTNAG 2 cut(s) 44, 683
DraI TTTAAA 1 cut(s) 544
Eam1104I CTCTTC 1 cut(s) 770
EarI CTCTTC 1 cut(s) 770
Eco130I CCWWGG 2 cut(s) 49, 712
Eco47I GGWCC 3 cut(s) 367, 403, 955
Eco57I CTGAAG 3 cut(s) 1266, 1343, 1428
EcoO109I RGGNCCY 2 cut(s) 367, 403
EcoRI GAATTC 1 cut(s) 224
EcoRII CCWGG 2 cut(s) 581, 977
EcoT14I CCWWGG 2 cut(s) 49, 712
ErhI CCWWGG 2 cut(s) 49, 712
FaqI GGGAC 3 cut(s) 353, 416, 584
FblI GTMKAC 2 cut(s) 215, 816
Fnu4HI GCNGC 3 cut(s) 1055, 1079, 1456
FokI GGATG 2 cut(s) 17, 254
Fsp4HI GCNGC 3 cut(s) 1055, 1079, 1456
FspBI CTAG 2 cut(s) 293, 998
GlaI GCGC 4 cut(s) 20, 587, 912, 1231
GluI GCNGC 3 cut(s) 1055, 1079, 1456
GsaI CCCAGC 1 cut(s) 34
HaeII RGCGCY 3 cut(s) 22, 589, 1233
HaeIII GGCC 5 cut(s) 42, 209, 803, 859, 977
HapII CCGG 2 cut(s) 159, 1141
HgaI GACGC 5 cut(s) 622, 971, 1300, 1376, 1447
HhaI GCGC 4 cut(s) 21, 588, 913, 1232
Hin1I GRCGYC 1 cut(s) 982
Hin6I GCGC 4 cut(s) 19, 586, 911, 1230
HinP1I GCGC 4 cut(s) 19, 586, 911, 1230
HincII GTYRAC 2 cut(s) 463, 511
HindII GTYRAC 2 cut(s) 463, 511
HinfI GANTC 2 cut(s) 755, 778
HpaI GTTAAC 1 cut(s) 511
HpaII CCGG 2 cut(s) 159, 1141
HphI GGTGA 4 cut(s) 97, 148, 836, 877
Hpy166II GTNNAC 5 cut(s) 216, 463, 511, 623, 817
Hpy188I TCNGA 6 cut(s) 276, 531, 667, 676, 1246, 1339
Hpy188III TCNNGA 9 cut(s) 524, 595, 772, 989, 1063, 1114, 1141, 1205, 1462
Hpy8I GTNNAC 5 cut(s) 216, 463, 511, 623, 817
Hpy99I CGWCG 1 cut(s) 1451
HpyAV CCTTC 8 cut(s) 281, 547, 692, 1029, 1079, 1111, 1271, 1352
HpyCH4IV ACGT 2 cut(s) 212, 1011
HpyCH4V TGCA 7 cut(s) 284, 502, 642, 728, 785, 847, 1442
HpyF10VI GCNNNNNNNGC 2 cut(s) 897, 1182
HpyF3I CTNAG 2 cut(s) 44, 683
HpySE526I ACGT 2 cut(s) 212, 1011
Hsp92I GRCGYC 1 cut(s) 982
HspAI GCGC 4 cut(s) 19, 586, 911, 1230
KflI GGGWCCC 1 cut(s) 403
Kpn2I TCCGGA 1 cut(s) 1140
KspAI GTTAAC 1 cut(s) 511
LmnI GCTCC 2 cut(s) 593, 1143
Lsp1109I GCAGC 3 cut(s) 1066, 1090, 1467
LweI GCATC 3 cut(s) 669, 711, 841
MaeI CTAG 2 cut(s) 293, 998
MaeII ACGT 2 cut(s) 212, 1011
MaeIII GTNAC 4 cut(s) 103, 914, 1213, 1312
MbiI CCGCTC 1 cut(s) 180
MfeI CAATTG 2 cut(s) 311, 637
MlyI GAGTC 1 cut(s) 787
MroI TCCGGA 1 cut(s) 1140
MseI TTAA 4 cut(s) 77, 438, 510, 543
MslI CAYNNNNRTG 1 cut(s) 653
MspI CCGG 2 cut(s) 159, 1141
MspR9I CCNGG 3 cut(s) 160, 583, 979
MunI CAATTG 2 cut(s) 311, 637
MvaI CCWGG 2 cut(s) 583, 979
MvnI CGCG 2 cut(s) 616, 913
MwoI GCNNNNNNNGC 2 cut(s) 897, 1182
NciI CCSGG 1 cut(s) 160
NcoI CCATGG 2 cut(s) 49, 712
NlaIV GGNNCC 5 cut(s) 369, 404, 405, 1139, 1186
NmuCI GTSAC 2 cut(s) 103, 1312
NspI RCATGY 4 cut(s) 502, 509, 799, 1442
OliI CACNNNNGTG 1 cut(s) 653
PaeI GCATGC 1 cut(s) 502
PciI ACATGT 1 cut(s) 505
PcsI WCGNNNNNNNCGW 2 cut(s) 768, 1455
PfeI GAWTC 1 cut(s) 755
PflMI CCANNNNNTGG 1 cut(s) 55
PkrI GCNGC 3 cut(s) 1056, 1080, 1457
PleI GAGTC 1 cut(s) 786
PpsI GAGTC 1 cut(s) 786
Ppu21I YACGTR 1 cut(s) 213
PpuMI RGGWCCY 2 cut(s) 367, 403
PscI ACATGT 1 cut(s) 505
Psp1406I AACGTT 1 cut(s) 1011
Psp5II RGGWCCY 2 cut(s) 367, 403
Psp6I CCWGG 2 cut(s) 581, 977
PspFI CCCAGC 1 cut(s) 30
PspGI CCWGG 2 cut(s) 581, 977
PspN4I GGNNCC 5 cut(s) 369, 404, 405, 1139, 1186
PspPI GGNCC 6 cut(s) 207, 367, 403, 801, 955, 975
PspPPI RGGWCCY 2 cut(s) 367, 403
RsaI GTAC 2 cut(s) 661, 1127
RsaNI GTAC 2 cut(s) 660, 1126
RseI CAYNNNNRTG 1 cut(s) 653
SaqAI TTAA 4 cut(s) 77, 438, 510, 543
SatI GCNGC 3 cut(s) 1055, 1079, 1456
Sau96I GGNCC 6 cut(s) 207, 367, 403, 801, 955, 975
SchI GAGTC 1 cut(s) 787
ScrFI CCNGG 3 cut(s) 160, 583, 979
SfaNI GCATC 3 cut(s) 669, 711, 841
SfcI CTRYAG 1 cut(s) 1158
SinI GGWCC 3 cut(s) 367, 403, 955
SmiMI CAYNNNNRTG 1 cut(s) 653
SmlI CTYRAG 2 cut(s) 175, 1099
SmoI CTYRAG 2 cut(s) 175, 1099
SphI GCATGC 1 cut(s) 502
SsiI CCGC 3 cut(s) 108, 180, 616
SspMI CTAG 2 cut(s) 293, 998
StyD4I CCNGG 3 cut(s) 158, 581, 977
StyI CCWWGG 2 cut(s) 49, 712
TaiI ACGT 2 cut(s) 215, 1014
TaqI TCGA 3 cut(s) 165, 771, 1113
TaqII GACCGA 2 cut(s) 972, 1226
TfiI GAWTC 1 cut(s) 755
Tru1I TTAA 4 cut(s) 77, 438, 510, 543
Tru9I TTAA 4 cut(s) 77, 438, 510, 543
TscAI CASTG 5 cut(s) 403, 477, 655, 817, 1216
TseFI GTSAC 2 cut(s) 103, 1312
TseI GCWGC 3 cut(s) 1054, 1078, 1455
Tsp45I GTSAC 2 cut(s) 103, 1312
TspDTI ATGAA 8 cut(s) 217, 885, 941, 1055, 1082, 1280, 1346, 1413
TspGWI ACGGA 2 cut(s) 233, 312
TspRI CASTG 5 cut(s) 403, 477, 655, 817, 1216
Van91I CCANNNNNTGG 1 cut(s) 55
VpaK11BI GGWCC 3 cut(s) 367, 403, 955
XapI RAATTY 3 cut(s) 224, 432, 539
XceI RCATGY 4 cut(s) 502, 509, 799, 1442
XcmI CCANNNNNNNNNTGG 2 cut(s) 56, 598
XmiI GTMKAC 2 cut(s) 215, 816
XspI CTAG 2 cut(s) 293, 998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.