FvH4_3g15080

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000096
Physical Location & Seq
Forward (+)
9329542 .. 9338925
9384 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g15080.t4

Sequence Viewer

Length: 2313 bp
ATGCACATACTGGAACCAGGTGACTCTCTCGATTCTTCAAGCTCCTTGGTTTCTGCAAATGGGAAGTTCACTTTGAGTTTTCATAGATATGATGATGCTGCAAGCTTGAGCTACCTAGTTTCGAAGTATAATGCGAGTCATGATTATGCTTGGGTTGCAAATAGATACACTCCTGTTTTATATCCTTTTGGAATTCTTACGTTGGACAGGAACAACACATTGAAAATCACTCAGAAAGATGGTGATCCTGTGGTGCTTTACTCTGCTGACTCAGGAACTATCATTGGTGATGTTGTGGCTACTCTTATGGATGATGGTAATTTTGTGCTACAAGAATTGAGCTCTGATGGATCGGCAAAGAGGGTTTTGTGGCAGAGTTTTGATTATCCAGGAGATGTGCTTCTGCCAGGTATGAAATTAGGGGTTAACCGTAGTACTGGCCACAATTGGTCACTCTCATGCTGGTTAACTGAGAAAAGTGCAGTGCCAGGACCTTTCACTCTTGATTGGGACCCTGATGGAAAAGAATTGCAAATTAGGAGACGAGGGGTAGTTTATTGGAGCAGTGGAGTCTTCAGAGATGGGAGTTTGGAAAATATTAAGCAGAAGAGGTATAAGTTCAGCATTGTTTCAAATGAGAATGAAGACTATTTCAGTTACTCTGCTGTTGATCGAAATGCTAGACCAGAATGGCTGCTAACCACAATAGGGAGACTATATGACTTTGATGGATCAATGGATATTGCAAAAGCGGATTCATGTTATGGATATAGCACTGATGGAGGATGCCAGATTTGGGACCAGCCAACTGAGTGTAGGCGTTTTGGGGATGTTTTTGAGCAAGAAAATGGGTACTTCAATCCGACTGGTTCCAGTGGTGCAAGTGTAACATCTACCAGTGATTCAAACACAAGTCTCAGTATTAGTGATTGTAAGGCTGCTTGTTGGGCAGATTGTAACTGTCGTGGATTCATCTTTCTGAATGCTAATCAGACTGGATGTCGGTATTGGACTGGGAACTTGAAGTTCATAGCAGACAGTGCAGGTTACAGTTCAAGTGTTGTTTACTTTTTAACAAAAAAATCAGCCAGCAGCCGCTCACGTAAGTGGATATGGACTGGTGCTGCTATTGTCACTGCTCTATTGGTAATGGTGCTTTGCATATTATGCTGTCTATTACGAAGAAAACTTATCTTGTCAGGGGAGAACAAGAGAAAGATTGATGAGCAAAAACTACTTCGCTTAAGGGGATCTGATATATCAACTGATGTCCACGGGATTCAGCATGATGGATCCATGGGACATGATTTAAGAGCATTTAGCTATGAATCTGTCATGGCTGCCACGGACAACTTCTCCTTACAGAACAAGCTAGGAGAGGGGGGATTTGGACCTGTTTATAAGGGAAAAATGCCGACTGGTCAAGTTATAGCTGTAAAGACACTTTCAAGTTGTTCAGGGCAAGGGGAAGTAGAGTTTAAGAATGAATTGATACTCATATCTGAACTCCAACATACTAATCTAGTTCAGCTTTTCGGATTTTGCATCCATGGTAAAGAGAGGATGCTGATATACGAGTATATGCCAAACAAGGGTCTGGACTGCATTTTATTTGATTCAACAAGATGCATGCTACTAGATTGGAAGAAGCGCTTCAATATAATTGAAGGAATCGCCCAAGGATTGCTTTATCTGCACAAGTACTCAAGATTGAAAGTAATTCATAGAGATCTTAAAGCAAGTAACATACTACTTGATGAAAATATGAACCCCAAAATATCTGATTTTGGTACGGCAAGGAGTTTCATGCTCAATGAAGTTGAAGCAAATACTGGGCGGATTGTTGGGACACATGGTTACATGTCTCCCGAGTATGCTATGCAGGGAATTTTTTCTGGAAAATCTGATGTTTTCAGTTTTGGAGTGTTGATGCTTGAAATCATAAGTGGTAGGAGAAACAACAGGTTTCACAATGCTCATCGCGCGCTCAATTTAGTAGGATATGCTTGGGAGTTATGGCAAGAAGGTGCAGGACTGGAATTGATGGACACAACATTAAGTGATTCGTGTGTTGAAAATCAATTTTTAAGATGCATCCATGTTGGTCTACTATGTGTTGAAGAAGATCCAGAACTTCGGCCAACCATGTCAGATGCCATTTCTATGTTGACAAATGAAAGCCTGCCTTTACCTATACCAACGAGACCGGTATCTTTTCCAGTAAGGCATTCGGCTGGGGTTGATATAAGAGGAACCGAATCCGAAATGTTATCAGAAAATGGCTTGTCCATCTCCCTTATTATAGGACGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

771

Amino Acids

85.82

Weight (kDa)

5.87

Isoelectric Point (pI)

42.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 179 2.6e-24 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 478 - 742 9.3e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 478 - 680 1.3e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1401
Acc36I ACCTGC 1 cut(s) 1034
AccBSI CCGCTC 1 cut(s) 1098
AccI GTMKAC 1 cut(s) 2107
AccII CGCG 2 cut(s) 1983, 1985
AciI CCGC 3 cut(s) 752, 1096, 1837
AclWI GGATC 7 cut(s) 239, 358, 739, 1258, 1287, 1300, 2120
AcoI YGGCCR 2 cut(s) 439, 2138
AcsI RAATTY 2 cut(s) 192, 1887
AcuI CTGAAG 1 cut(s) 559
AfaI GTAC 4 cut(s) 436, 854, 1703, 1792
AfeI AGCGCT 1 cut(s) 1652
AfiI CCNNNNNNNGG 3 cut(s) 708, 796, 1592
AflII CTTAAG 1 cut(s) 1243
AflIII ACRYGT 1 cut(s) 1860
AgeI ACCGGT 1 cut(s) 2206
AhdI GACNNNNNGTC 1 cut(s) 999
AjnI CCWGG 4 cut(s) 16, 388, 406, 487
AleI CACNNNNGTG 1 cut(s) 1105
AluBI AGCT 8 cut(s) 42, 105, 111, 342, 1323, 1372, 1433, 1531
AluI AGCT 8 cut(s) 42, 105, 111, 342, 1323, 1372, 1433, 1531
Alw21I GWGCWC 1 cut(s) 344
Alw26I GTCTC 5 cut(s) 535, 706, 920, 1869, 2197
AlwI GGATC 7 cut(s) 239, 358, 739, 1258, 1287, 1300, 2120
Ama87I CYCGRG 1 cut(s) 1868
Aor51HI AGCGCT 1 cut(s) 1652
AoxI GGCC 2 cut(s) 439, 2138
ApeKI GCWGC 6 cut(s) 98, 694, 938, 1092, 1124, 1340
ApoI RAATTY 2 cut(s) 192, 1887
AsiGI ACCGGT 1 cut(s) 2206
Asp700I GAANNNNTTC 2 cut(s) 1652, 1891
AspLEI GCGC 3 cut(s) 1653, 1985, 1987
AspS9I GGNCC 4 cut(s) 491, 511, 799, 1391
AsuHPI GGTGA 3 cut(s) 32, 254, 299
AsuII TTCGAA 1 cut(s) 122
AvaI CYCGRG 1 cut(s) 1868
AvaII GGWCC 4 cut(s) 491, 511, 799, 1391
BalI TGGCCA 1 cut(s) 441
BamHI GGATCC 1 cut(s) 1292
BanII GRGCYC 1 cut(s) 344
BbsI GAAGAC 2 cut(s) 565, 651
Bbv12I GWGCWC 1 cut(s) 344
BbvI GCAGC 6 cut(s) 85, 681, 925, 1104, 1111, 1327
BceAI ACGGC 1 cut(s) 1809
BciT130I CCWGG 4 cut(s) 18, 390, 408, 489
BcoDI GTCTC 5 cut(s) 535, 706, 920, 1869, 2197
BfaI CTAG 5 cut(s) 116, 681, 1373, 1523, 1637
BfoI RGCGCY 1 cut(s) 1654
BfrI CTTAAG 1 cut(s) 1243
BfuAI ACCTGC 1 cut(s) 1034
BglII AGATCT 1 cut(s) 1729
BisI GCNGC 7 cut(s) 99, 695, 939, 1093, 1096, 1125, 1341
BlsI GCNGC 7 cut(s) 100, 696, 940, 1094, 1097, 1126, 1342
BmcAI AGTACT 2 cut(s) 436, 1703
Bme1390I CCNGG 4 cut(s) 18, 390, 408, 489
Bme18I GGWCC 4 cut(s) 491, 511, 799, 1391
BmeRI GACNNNNNGTC 1 cut(s) 999
BmeT110I CYCGRG 1 cut(s) 1868
BmgT120I GGNCC 4 cut(s) 491, 511, 799, 1391
BmiI GGNNCC 7 cut(s) 15, 512, 513, 800, 871, 1294, 2254
BmrFI CCNGG 4 cut(s) 18, 390, 408, 489
BmrI ACTGGG 2 cut(s) 1023, 1842
BmsI GCATC 9 cut(s) 85, 776, 1554, 1554, 1616, 1920, 2081, 2103, 2143
BmuI ACTGGG 2 cut(s) 1023, 1842
BpiI GAAGAC 2 cut(s) 565, 651
Bpu14I TTCGAA 1 cut(s) 122
BpuEI CTTGAG 2 cut(s) 127, 1690
BsaAI YACGTR 1 cut(s) 1103
BsaBI GATNNNNATC 1 cut(s) 243
BsaI GGTCTC 1 cut(s) 2197
BsaJI CCNNGG 6 cut(s) 45, 1273, 1296, 1344, 1549, 1678
BsaWI WCCGGW 1 cut(s) 2206
BsaXI ACNNNNNCTCC 2 cut(s) 1340, 1370
Bsc4I CCNNNNNNNGG 3 cut(s) 708, 796, 1592
Bse118I RCCGGY 1 cut(s) 2206
Bse8I GATNNNNATC 1 cut(s) 243
BseBI CCWGG 4 cut(s) 18, 390, 408, 489
BseDI CCNNGG 6 cut(s) 45, 1273, 1296, 1344, 1549, 1678
BseGI GGATG 7 cut(s) 316, 791, 835, 1004, 1545, 1569, 2094
BseJI GATNNNNATC 1 cut(s) 243
BseLI CCNNNNNNNGG 3 cut(s) 708, 796, 1592
BseMII CTCAG 5 cut(s) 245, 285, 462, 801, 931
BsePI GCGCGC 1 cut(s) 1983
BseXI GCAGC 6 cut(s) 85, 681, 925, 1104, 1111, 1327
BseYI CCCAGC 1 cut(s) 2234
BsgI GTGCAG 4 cut(s) 501, 1062, 1679, 2049
Bsh1236I CGCG 2 cut(s) 1983, 1985
BshFI GGCC 2 cut(s) 441, 2140
BshTI ACCGGT 1 cut(s) 2206
BsiHKAI GWGCWC 1 cut(s) 344
BsiHKCI CYCGRG 1 cut(s) 1868
BsiSI CCGG 1 cut(s) 2207
BslFI GGGAC 4 cut(s) 524, 812, 1314, 1861
BslI CCNNNNNNNGG 3 cut(s) 708, 796, 1592
BsmAI GTCTC 5 cut(s) 535, 706, 920, 1869, 2197
BsmBI CGTCTC 1 cut(s) 535
BsmFI GGGAC 4 cut(s) 524, 812, 1314, 1861
BsmI GAATGC 2 cut(s) 988, 2227
BsnI GGCC 2 cut(s) 441, 2140
Bso31I GGTCTC 1 cut(s) 2197
BsoBI CYCGRG 1 cut(s) 1868
Bsp119I TTCGAA 1 cut(s) 122
Bsp1286I GDGCHC 1 cut(s) 344
Bsp143I GATC 8 cut(s) 244, 350, 670, 731, 1250, 1292, 1729, 2125
Bsp19I CCATGG 2 cut(s) 1296, 1549
BspACI CCGC 3 cut(s) 752, 1096, 1837
BspANI GGCC 2 cut(s) 441, 2140
BspCNI CTCAG 5 cut(s) 244, 284, 463, 802, 930
BspFNI CGCG 2 cut(s) 1983, 1985
BspHI TCATGA 1 cut(s) 139
BspLI GGNNCC 7 cut(s) 15, 512, 513, 800, 871, 1294, 2254
BspMI ACCTGC 1 cut(s) 1034
BspPI GGATC 7 cut(s) 239, 358, 739, 1258, 1287, 1300, 2120
BspT104I TTCGAA 1 cut(s) 122
BspTI CTTAAG 1 cut(s) 1243
BspTNI GGTCTC 1 cut(s) 2197
BsrBI CCGCTC 1 cut(s) 1098
BsrFI RCCGGY 1 cut(s) 2206
BssAI RCCGGY 1 cut(s) 2206
BssECI CCNNGG 6 cut(s) 45, 1273, 1296, 1344, 1549, 1678
BssHII GCGCGC 1 cut(s) 1983
BssMI GATC 8 cut(s) 244, 350, 670, 731, 1250, 1292, 1729, 2125
BssT1I CCWWGG 4 cut(s) 45, 1296, 1549, 1678
Bst2UI CCWGG 4 cut(s) 18, 390, 408, 489
Bst4CI ACNGT 4 cut(s) 431, 962, 1040, 1052
Bst6I CTCTTC 1 cut(s) 602
BstAFI CTTAAG 1 cut(s) 1243
BstAPI GCANNNNNTGC 2 cut(s) 1040, 1167
BstBAI YACGTR 1 cut(s) 1103
BstBI TTCGAA 1 cut(s) 122
BstC8I GCNNGC 5 cut(s) 103, 1090, 1631, 1985, 2183
BstDEI CTNAG 5 cut(s) 231, 271, 471, 810, 917
BstDSI CCRYGG 4 cut(s) 1273, 1296, 1344, 1549
BstF5I GGATG 7 cut(s) 316, 791, 835, 1004, 1545, 1569, 2094
BstFNI CGCG 2 cut(s) 1983, 1985
BstH2I RGCGCY 1 cut(s) 1654
BstHHI GCGC 3 cut(s) 1653, 1985, 1987
BstKTI GATC 8 cut(s) 247, 353, 673, 734, 1253, 1295, 1732, 2128
BstMAI GTCTC 5 cut(s) 535, 706, 920, 1869, 2197
BstMBI GATC 8 cut(s) 244, 350, 670, 731, 1250, 1292, 1729, 2125
BstMWI GCNNNNNNNGC 6 cut(s) 155, 947, 1040, 1167, 1693, 1982
BstNI CCWGG 4 cut(s) 18, 390, 408, 489
BstNSI RCATGY 2 cut(s) 1633, 1864
BstSCI CCNGG 4 cut(s) 16, 388, 406, 487
BstUI CGCG 2 cut(s) 1983, 1985
BstV1I GCAGC 6 cut(s) 85, 681, 925, 1104, 1111, 1327
BstV2I GAAGAC 2 cut(s) 565, 651
BstX2I RGATCY 4 cut(s) 1250, 1292, 1729, 2125
BstYI RGATCY 4 cut(s) 1250, 1292, 1729, 2125
BsuRI GGCC 2 cut(s) 441, 2140
BtgI CCRYGG 4 cut(s) 1273, 1296, 1344, 1549
BtgZI GCGATG 1 cut(s) 1964
BtsCI GGATG 7 cut(s) 316, 791, 835, 1004, 1545, 1569, 2094
BtsI GCAGTG 3 cut(s) 489, 571, 1134
BtsIMutI CAGTG 7 cut(s) 489, 571, 774, 880, 904, 1045, 1134
BveI ACCTGC 1 cut(s) 1034
Cac8I GCNNGC 5 cut(s) 103, 1090, 1631, 1985, 2183
CciI TCATGA 1 cut(s) 139
CfoI GCGC 3 cut(s) 1653, 1985, 1987
Cfr10I RCCGGY 1 cut(s) 2206
Cfr13I GGNCC 4 cut(s) 491, 511, 799, 1391
CsiI ACCWGGT 1 cut(s) 16
Csp6I GTAC 4 cut(s) 435, 853, 1702, 1791
CspAI ACCGGT 1 cut(s) 2206
CviQI GTAC 4 cut(s) 435, 853, 1702, 1791
DdeI CTNAG 5 cut(s) 231, 271, 471, 810, 917
DpnI GATC 8 cut(s) 246, 352, 672, 733, 1252, 1294, 1731, 2127
DpnII GATC 8 cut(s) 244, 350, 670, 731, 1250, 1292, 1729, 2125
DriI GACNNNNNGTC 1 cut(s) 999
EaeI YGGCCR 2 cut(s) 439, 2138
Eam1104I CTCTTC 1 cut(s) 602
Eam1105I GACNNNNNGTC 1 cut(s) 999
EarI CTCTTC 1 cut(s) 602
EciI GGCGGA 1 cut(s) 1852
Ecl136II GAGCTC 1 cut(s) 342
Eco130I CCWWGG 4 cut(s) 45, 1296, 1549, 1678
Eco24I GRGCYC 1 cut(s) 344
Eco31I GGTCTC 1 cut(s) 2197
Eco47I GGWCC 4 cut(s) 491, 511, 799, 1391
Eco47III AGCGCT 1 cut(s) 1652
Eco53kI GAGCTC 1 cut(s) 342
Eco57I CTGAAG 1 cut(s) 559
Eco88I CYCGRG 1 cut(s) 1868
EcoICRI GAGCTC 1 cut(s) 342
EcoO109I RGGNCCY 2 cut(s) 491, 511
EcoRI GAATTC 1 cut(s) 192
EcoRII CCWGG 4 cut(s) 16, 388, 406, 487
EcoT14I CCWWGG 4 cut(s) 45, 1296, 1549, 1678
EcoT22I ATGCAT 2 cut(s) 1631, 2096
EcoT38I GRGCYC 1 cut(s) 344
ErhI CCWWGG 4 cut(s) 45, 1296, 1549, 1678
Esp3I CGTCTC 1 cut(s) 535
FalI AAGNNNNNCTT 6 cut(s) 1637, 1669, 1671, 1703, 2170, 2202
FaqI GGGAC 4 cut(s) 524, 812, 1314, 1861
FblI GTMKAC 1 cut(s) 2107
Fnu4HI GCNGC 7 cut(s) 99, 695, 939, 1093, 1096, 1125, 1341
FokI GGATG 7 cut(s) 323, 798, 842, 1011, 1532, 1576, 2081
FriOI GRGCYC 1 cut(s) 344
Fsp4HI GCNGC 7 cut(s) 99, 695, 939, 1093, 1096, 1125, 1341
FspBI CTAG 5 cut(s) 116, 681, 1373, 1523, 1637
GlaI GCGC 3 cut(s) 1652, 1984, 1986
GluI GCNGC 7 cut(s) 99, 695, 939, 1093, 1096, 1125, 1341
GsaI CCCAGC 1 cut(s) 2238
HaeII RGCGCY 1 cut(s) 1654
HaeIII GGCC 2 cut(s) 441, 2140
HapII CCGG 1 cut(s) 2207
HhaI GCGC 3 cut(s) 1653, 1985, 1987
Hin6I GCGC 3 cut(s) 1651, 1983, 1985
HinP1I GCGC 3 cut(s) 1651, 1983, 1985
HincII GTYRAC 3 cut(s) 427, 468, 2169
HindII GTYRAC 3 cut(s) 427, 468, 2169
HindIII AAGCTT 1 cut(s) 103
HpaI GTTAAC 2 cut(s) 427, 468
HpaII CCGG 1 cut(s) 2207
HphI GGTGA 3 cut(s) 32, 254, 299
Hpy166II GTNNAC 7 cut(s) 69, 427, 468, 1066, 1273, 2108, 2169
Hpy188III TCNNGA 9 cut(s) 29, 140, 273, 503, 1598, 1707, 1868, 1896, 2129
Hpy8I GTNNAC 7 cut(s) 69, 427, 468, 1066, 1273, 2108, 2169
HpyAV CCTTC 2 cut(s) 1661, 2018
HpyCH4III ACNGT 4 cut(s) 431, 962, 1040, 1052
HpyCH4IV ACGT 2 cut(s) 200, 1102
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 947, 1040, 1167, 1693, 1982
HpyF3I CTNAG 5 cut(s) 231, 271, 471, 810, 917
HpySE526I ACGT 2 cut(s) 200, 1102
HspAI GCGC 3 cut(s) 1651, 1983, 1985
KflI GGGWCCC 1 cut(s) 511
KspAI GTTAAC 2 cut(s) 427, 468
Kzo9I GATC 8 cut(s) 244, 350, 670, 731, 1250, 1292, 1729, 2125
LmnI GCTCC 2 cut(s) 47, 561
Lsp1109I GCAGC 6 cut(s) 85, 681, 925, 1104, 1111, 1327
LweI GCATC 9 cut(s) 85, 776, 1554, 1554, 1616, 1920, 2081, 2103, 2143
MabI ACCWGGT 1 cut(s) 16
MaeI CTAG 5 cut(s) 116, 681, 1373, 1523, 1637
MaeII ACGT 2 cut(s) 200, 1102
MaeIII GTNAC 9 cut(s) 20, 450, 656, 886, 956, 1046, 1132, 1742, 1856
MalI GATC 8 cut(s) 246, 352, 672, 733, 1252, 1294, 1731, 2127
MbiI CCGCTC 1 cut(s) 1098
MboI GATC 8 cut(s) 244, 350, 670, 731, 1250, 1292, 1729, 2125
MboII GAAGA 8 cut(s) 27, 565, 619, 656, 1194, 1657, 2132, 2135
MfeI CAATTG 1 cut(s) 445
MflI RGATCY 4 cut(s) 1250, 1292, 1729, 2125
MhlI GDGCHC 1 cut(s) 344
MlsI TGGCCA 1 cut(s) 441
MluNI TGGCCA 1 cut(s) 441
MlyI GAGTC 4 cut(s) 17, 145, 263, 579
MmeI TCCRAC 3 cut(s) 183, 887, 1534
MnlI CCTC 7 cut(s) 354, 539, 603, 776, 1372, 1554, 2243
Mox20I TGGCCA 1 cut(s) 441
Mph1103I ATGCAT 2 cut(s) 1631, 2096
MroXI GAANNNNTTC 2 cut(s) 1652, 1891
MscI TGGCCA 1 cut(s) 441
MslI CAYNNNNRTG 5 cut(s) 87, 144, 457, 1105, 2162
Msp20I TGGCCA 1 cut(s) 441
MspCI CTTAAG 1 cut(s) 1243
MspI CCGG 1 cut(s) 2207
MspR9I CCNGG 4 cut(s) 18, 390, 408, 489
MunI CAATTG 1 cut(s) 445
Mva1269I GAATGC 2 cut(s) 988, 2227
MvaI CCWGG 4 cut(s) 18, 390, 408, 489
MvnI CGCG 2 cut(s) 1983, 1985
MwoI GCNNNNNNNGC 6 cut(s) 155, 947, 1040, 1167, 1693, 1982
NcoI CCATGG 2 cut(s) 1296, 1549
NdeII GATC 8 cut(s) 244, 350, 670, 731, 1250, 1292, 1729, 2125
NlaIV GGNNCC 7 cut(s) 15, 512, 513, 800, 871, 1294, 2254
NmuCI GTSAC 3 cut(s) 20, 450, 1132
NsiI ATGCAT 2 cut(s) 1631, 2096
NspI RCATGY 2 cut(s) 1633, 1864
NspV TTCGAA 1 cut(s) 122
OliI CACNNNNGTG 1 cut(s) 1105
PaeI GCATGC 1 cut(s) 1633
PagI TCATGA 1 cut(s) 139
PauI GCGCGC 1 cut(s) 1983
PciI ACATGT 1 cut(s) 1860
PctI GAATGC 2 cut(s) 988, 2227
PdmI GAANNNNTTC 2 cut(s) 1652, 1891
PfoI TCCNGGA 1 cut(s) 388
PinAI ACCGGT 1 cut(s) 2206
PkrI GCNGC 7 cut(s) 100, 696, 940, 1094, 1097, 1126, 1342
PleI GAGTC 4 cut(s) 17, 144, 263, 578
PpsI GAGTC 4 cut(s) 17, 144, 263, 578
Ppu21I YACGTR 1 cut(s) 1103
PpuMI RGGWCCY 2 cut(s) 491, 511
PscI ACATGT 1 cut(s) 1860
PsiI TTATAA 1 cut(s) 1401
Psp124BI GAGCTC 1 cut(s) 344
Psp5II RGGWCCY 2 cut(s) 491, 511
Psp6I CCWGG 4 cut(s) 16, 388, 406, 487
PspFI CCCAGC 1 cut(s) 2234
PspGI CCWGG 4 cut(s) 16, 388, 406, 487
PspN4I GGNNCC 7 cut(s) 15, 512, 513, 800, 871, 1294, 2254
PspPI GGNCC 4 cut(s) 491, 511, 799, 1391
PspPPI RGGWCCY 2 cut(s) 491, 511
PsuI RGATCY 4 cut(s) 1250, 1292, 1729, 2125
PteI GCGCGC 1 cut(s) 1983
RsaI GTAC 4 cut(s) 436, 854, 1703, 1792
RsaNI GTAC 4 cut(s) 435, 853, 1702, 1791
RseI CAYNNNNRTG 5 cut(s) 87, 144, 457, 1105, 2162
SacI GAGCTC 1 cut(s) 344
SatI GCNGC 7 cut(s) 99, 695, 939, 1093, 1096, 1125, 1341
Sau3AI GATC 8 cut(s) 244, 350, 670, 731, 1250, 1292, 1729, 2125
Sau96I GGNCC 4 cut(s) 491, 511, 799, 1391
ScaI AGTACT 2 cut(s) 436, 1703
SchI GAGTC 4 cut(s) 17, 145, 263, 579
ScrFI CCNGG 4 cut(s) 18, 390, 408, 489
SduI GDGCHC 1 cut(s) 344
SexAI ACCWGGT 1 cut(s) 16
SfaNI GCATC 9 cut(s) 85, 776, 1554, 1554, 1616, 1920, 2081, 2103, 2143
SfuI TTCGAA 1 cut(s) 122
SinI GGWCC 4 cut(s) 491, 511, 799, 1391
SmiMI CAYNNNNRTG 5 cut(s) 87, 144, 457, 1105, 2162
SmlI CTYRAG 3 cut(s) 106, 1243, 1705
SmoI CTYRAG 3 cut(s) 106, 1243, 1705
SphI GCATGC 1 cut(s) 1633
SsiI CCGC 3 cut(s) 752, 1096, 1837
SspI AATATT 1 cut(s) 598
SspMI CTAG 5 cut(s) 116, 681, 1373, 1523, 1637
SstI GAGCTC 1 cut(s) 344
StyD4I CCNGG 4 cut(s) 16, 388, 406, 487
StyI CCWWGG 4 cut(s) 45, 1296, 1549, 1678
TaaI ACNGT 4 cut(s) 431, 962, 1040, 1052
TaiI ACGT 2 cut(s) 203, 1105
TaqI TCGA 3 cut(s) 30, 122, 673
TatI WGTACW 2 cut(s) 434, 1701
TauI GCSGC 1 cut(s) 1098
TscAI CASTG 7 cut(s) 489, 571, 781, 880, 904, 1045, 1141
TseFI GTSAC 3 cut(s) 20, 450, 1132
TseI GCWGC 6 cut(s) 98, 694, 938, 1092, 1124, 1340
Tsp45I GTSAC 3 cut(s) 20, 450, 1132
TspGWI ACGGA 1 cut(s) 1361
TspRI CASTG 7 cut(s) 489, 571, 781, 880, 904, 1045, 1141
Vha464I CTTAAG 1 cut(s) 1243
VpaK11BI GGWCC 4 cut(s) 491, 511, 799, 1391
XapI RAATTY 2 cut(s) 192, 1887
XceI RCATGY 2 cut(s) 1633, 1864
XmiI GTMKAC 1 cut(s) 2107
XmnI GAANNNNTTC 2 cut(s) 1652, 1891
XspI CTAG 5 cut(s) 116, 681, 1373, 1523, 1637
ZrmI AGTACT 2 cut(s) 436, 1703
Zsp2I ATGCAT 2 cut(s) 1631, 2096
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.