RchiOBHm_Chr4g0410521

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000096
Physical Location & Seq
Reverse (-)
34279088 .. 34282587
3500 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38142

Sequence Viewer

Length: 2460 bp
ATGAGGTTGTACTCAAACATGGTCAGTAGTCTCAAGTTAATATTCTTGATAGTCTTATCAAGCTTGTGGAATTGTCATGCTGCTGCAAGCAGGGACACGCTGAAACCAGGTGACACTCTCAATTCGTCAAGTTTCTTAGTTTCTTCAAATGGCAAGTTTATTTTTGGTTTCAATGTGTCTGAGAAATCCAACTCCAACTCCTCCTACCTTAGTATCAGTTGGGAGAAGAGTCAGAATTTCGCTTGGATTGCCAACCGAGACACGCCTATTTTGTACCCTTCAGGCGTTCTTACCCTGGACAAGAACAAAACCTTAAAAATTACACACACAGGTGGTGATCCTCTGGTCCTCTACTCAGCTGCTGCTTCAGAAAATACCTCCAGTAGTAACCCTAGTAATTTTGTGGCTACCCTGTTGGATTCGGGCAATTTTATCCTACAAGAGGTGAGCTCAGATGGATCAACGAAGCAACTGCTGTGGCAAAGTTTCGATTATCCTGGGGACACCCTTTTGCCAGGTATGAAGTTAGGCGTTAAACATACAACTGGTCACATTTGGTCGCTTTCATCATGGTTAACCGAGAATAGCGCTGAGCGAGGCGCTTTTACCCTTGATTGGGACCCTGAGGGACATGAATTGAAAATTAAGCGACGAGGGGTGGTTTACTGGTCCAGTGGAGTCTTCAGAAATAAGAGATTTCAATTCATTCTACCGCATGGATCGAAGCACCTCAAGTACAACTTTAGCTTTGTCTCAAATGAGAATGAAGACTACTTCACTTATACTAGGATATTAGATGATGATGATCAAAGTGATGAAGTATCAGAATGGGTGCTAACATCATTGGGACGACTATTGGACATGACATCAAAAGTTGATATTGCACGAGCAGATAACTGTTATGGCTATAACACTCCTGATGATGGGTGCCAAACGTGGCGGCAACCAAGTTGCAGGCATTTGGACAATACATTTGAGGAAGGAAATGGTTATTTTGATACAACCACCATCTCTAATGCAACAACAACTAGTGATCCGAATACAAGTCTCAGCACTAATGATTGTAAGGCTGCTTGTTGGGAAAATTGTGACTGTGTTGGATTCAACTTTCTATTTGATAATCAGACTGGATGCAAGTTTTGGAACGGAAACTGGGAGTTCACTCAAGGCCTCTCTGGTTATAGTAGTTCAACTAATCTCTATTTTCTAACAACAAAAATATCTCCCAGTGGTGCAAACAAGAGGCTTCGTCCCATCATTATCGTTTCTGTAGTTGGTATAGTGGTTCTTTTACTGCTTTGCATCGTCTGGTTTGGTTTAAGAAGGAAATCTGCAATTTCAGGCAAAAACGGGACAAGGATTGAGAATGAATTGCTTGACTTGATGAAATCTGATAGATCTATCGATAGTGTCGAGGGACACGAAAATGATGGAAACATGGGACATGGTCTAAGAGTATTTAGCTATGCATCCGTCTTGTCTGCCACATGCAACTTCTCAGCAGAAAATAAGCTTGGAGAGGGTGGCTTTGGACCTGTTTATAAGGGAAAATTGATAACCGGACGAGATATAGCTGTGAAGAAGCTTTCAAGGCGTTCCGGGCAAGGAACCCTGGAGTTTAAAAATGAATTGATACTCATATCTGAACTTCAGCATAAAAACCTTGTTCGGCTTTTGGGATTTTGTGTTCACTGTGAAGAGAGGATGCTAATATACGAGTATATGCCAAACAAGAGTCTGGATTTCTTTTTATTTGATTCATCCAGAGGCTTGCTACTAGATTGGAAGAAGCGTTTCAATATAATTGAAGGAATTGCTCAAGGATTACTTTACTTGCACAAATATTCAAGATTGAGAGTAATTCACAGAGACTTAAAAGCTAGCAATATACTACTGGATGAAAATATGAGCCCGAAAATTTCTGACTTTGGTATGGCAAGGATTTTCACCGGTGATGAACTGGAAGCAAATACTAACAGAATTGTTGGGACATACGGTTACATGTCTCCCGAGTATGCCATGGAGGGAATTTTCTCCATTAAATCTGATGTCTACAGTTTTGGCGTGTTAATGCTGGAAATCATATGTGGTAGGAAAAACAATAGCTTCTACAATGCTGATCGAGTACTCAATATAGTAGGATATGCCTGGGAGTTGTGGAAACAAGGTTCATGGCTAGAATTAATGGATTCAACAACGCTAGGCGATTCCTTTGTAAGAGATCAGCTGTTAAGATGCCTCCAAGTTAGTTTACTATGCGTAGAGGAAAATGCAGCAGATCGACCTACCATGTCAGATGTCATATCTATGTTGACAAAAACTGAAAGTGTGCCATTACCTATACCTACAAAGCCAGCATTTTTTACAGGAAGAAAATCTGTCAGGGCTGGTGTAGATAGATCGGAATCAGAGATTTCATCAGTAAATGCATTCTCCAATTCTGATTTTGTTGCACGTTAG

Protein Analysis

819

Amino Acids

91.85

Weight (kDa)

6.12

Isoelectric Point (pI)

36.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 81 - 191 3.5e-26 D-mannose binding lectin
Pkinase PF00069 500 - 702 2.6e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 501 - 769 5.4e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1542
AccB1I GGYRCC 1 cut(s) 927
AccI GTMKAC 1 cut(s) 2052
AciI CCGC 2 cut(s) 713, 940
AclWI GGATC 4 cut(s) 332, 466, 727, 1028
AcsI RAATTY 3 cut(s) 235, 1917, 2028
AcuI CTGAAG 4 cut(s) 264, 351, 667, 1634
AfaI GTAC 4 cut(s) 11, 275, 737, 2127
AfeI AGCGCT 1 cut(s) 589
AfiI CCNNNNNNNGG 4 cut(s) 442, 615, 616, 923
AflIII ACRYGT 1 cut(s) 2001
AgeI ACCGGT 1 cut(s) 1949
AhlI ACTAGT 1 cut(s) 1028
AjnI CCWGG 6 cut(s) 106, 294, 496, 514, 1611, 2147
AjuI GAANNNNNNNTTGG 2 cut(s) 1497, 1529
AleI CACNNNNGTG 1 cut(s) 330
AloI GAACNNNNNNTCC 4 cut(s) 1671, 1703, 2152, 2184
Alw21I GWGCWC 1 cut(s) 452
Alw26I GTCTC 6 cut(s) 35, 252, 757, 1052, 1863, 2010
AlwI GGATC 4 cut(s) 332, 466, 727, 1028
AlwNI CAGNNNCTG 1 cut(s) 362
Ama87I CYCGRG 1 cut(s) 2009
Aor51HI AGCGCT 1 cut(s) 589
AoxI GGCC 1 cut(s) 1168
ApeKI GCWGC 6 cut(s) 80, 83, 359, 362, 1070, 2273
ApoI RAATTY 3 cut(s) 235, 1917, 2028
ArsI GACNNNNNNTTYG 2 cut(s) 956, 988
AseI ATTAAT 1 cut(s) 2183
AsiGI ACCGGT 1 cut(s) 1949
Asp700I GAANNNNTTC 1 cut(s) 1793
AspLEI GCGC 2 cut(s) 590, 602
AspS9I GGNCC 4 cut(s) 346, 619, 669, 1532
AsuC2I CCSGG 1 cut(s) 1600
AsuHPI GGTGA 5 cut(s) 122, 347, 457, 1939, 1964
AsuNHI GCTAGC 1 cut(s) 1880
AvaI CYCGRG 1 cut(s) 2009
AvaII GGWCC 4 cut(s) 346, 619, 669, 1532
AxyI CCTNAGG 1 cut(s) 624
BaeI ACNNNNGTAYC 2 cut(s) 196, 229
BanI GGYRCC 1 cut(s) 927
BanII GRGCYC 2 cut(s) 452, 1913
BauI CACGAG 1 cut(s) 885
BbsI GAAGAC 2 cut(s) 673, 774
Bbv12I GWGCWC 1 cut(s) 452
BbvI GCAGC 6 cut(s) 67, 70, 346, 349, 1057, 2285
BccI CCATC 5 cut(s) 449, 917, 1016, 1262, 1424
BcgI CGANNNNNNTGC 2 cut(s) 454, 488
BciT130I CCWGG 6 cut(s) 108, 296, 498, 516, 1613, 2149
BclI TGATCA 1 cut(s) 805
BcnI CCSGG 1 cut(s) 1600
BcoDI GTCTC 6 cut(s) 35, 252, 757, 1052, 1863, 2010
BcuI ACTAGT 1 cut(s) 1028
BfaI CTAG 7 cut(s) 393, 786, 1029, 1778, 1881, 2177, 2201
BfmI CTRYAG 2 cut(s) 1269, 2053
BfoI RGCGCY 2 cut(s) 591, 603
BglII AGATCT 1 cut(s) 1397
BisI GCNGC 7 cut(s) 81, 84, 360, 363, 941, 1071, 2274
BlpI GCTNAGC 1 cut(s) 591
BlsI GCNGC 7 cut(s) 82, 85, 361, 364, 942, 1072, 2275
BmcAI AGTACT 1 cut(s) 2127
Bme1390I CCNGG 7 cut(s) 108, 296, 498, 516, 1600, 1613, 2149
Bme18I GGWCC 4 cut(s) 346, 619, 669, 1532
BmeT110I CYCGRG 1 cut(s) 2009
BmgT120I GGNCC 4 cut(s) 346, 619, 669, 1532
BmiI GGNNCC 4 cut(s) 620, 621, 929, 1609
BmrFI CCNGG 7 cut(s) 108, 296, 498, 516, 1600, 1613, 2149
BmrI ACTGGG 2 cut(s) 1162, 1221
BmsI GCATC 5 cut(s) 1121, 1311, 1478, 1695, 2225
BmtI GCTAGC 1 cut(s) 1884
BmuI ACTGGG 2 cut(s) 1162, 1221
BpiI GAAGAC 2 cut(s) 673, 774
BplI GAGNNNNNCTC 2 cut(s) 434, 466
BpmI CTGGAG 2 cut(s) 364, 1634
Bpu1102I GCTNAGC 1 cut(s) 591
BpuEI CTTGAG 4 cut(s) 17, 716, 1149, 1803
BpuMI CCSGG 1 cut(s) 1600
Bsa29I ATCGAT 1 cut(s) 1404
BsaBI GATNNNNATC 2 cut(s) 804, 2404
BsaJI CCNNGG 5 cut(s) 294, 497, 1611, 2019, 2148
BsaWI WCCGGW 2 cut(s) 1559, 1949
BsaXI ACNNNNNCTCC 2 cut(s) 182, 212
Bsc4I CCNNNNNNNGG 4 cut(s) 442, 615, 616, 923
Bse118I RCCGGY 1 cut(s) 1949
Bse1I ACTGG 9 cut(s) 381, 550, 671, 672, 1132, 1157, 1227, 1899, 1965
Bse21I CCTNAGG 1 cut(s) 624
Bse8I GATNNNNATC 2 cut(s) 804, 2404
BseBI CCWGG 6 cut(s) 108, 296, 498, 516, 1613, 2149
BseCI ATCGAT 1 cut(s) 1404
BseDI CCNNGG 5 cut(s) 294, 497, 1611, 2019, 2148
BseGI GGATG 5 cut(s) 1136, 1469, 1710, 1760, 1903
BseJI GATNNNNATC 2 cut(s) 804, 2404
BseLI CCNNNNNNNGG 4 cut(s) 442, 615, 616, 923
BseMII CTCAG 7 cut(s) 171, 369, 465, 582, 615, 1063, 1512
BseNI ACTGG 9 cut(s) 381, 550, 671, 672, 1132, 1157, 1227, 1899, 1965
BseRI GAGGAG 1 cut(s) 190
BseXI GCAGC 6 cut(s) 67, 70, 346, 349, 1057, 2285
BshFI GGCC 1 cut(s) 1170
BshNI GGYRCC 1 cut(s) 927
BshTI ACCGGT 1 cut(s) 1949
BshVI ATCGAT 1 cut(s) 1404
BsiHKAI GWGCWC 1 cut(s) 452
BsiHKCI CYCGRG 1 cut(s) 2009
BsiSI CCGG 3 cut(s) 1560, 1599, 1950
BslI CCNNNNNNNGG 4 cut(s) 442, 615, 616, 923
BsmAI GTCTC 6 cut(s) 35, 252, 757, 1052, 1863, 2010
BsmI GAATGC 1 cut(s) 2429
BsnI GGCC 1 cut(s) 1170
BsoBI CYCGRG 1 cut(s) 2009
Bsp1286I GDGCHC 2 cut(s) 452, 1913
Bsp1720I GCTNAGC 1 cut(s) 591
Bsp19I CCATGG 1 cut(s) 2019
BspACI CCGC 2 cut(s) 713, 940
BspANI GGCC 1 cut(s) 1170
BspCNI CTCAG 7 cut(s) 172, 368, 464, 583, 616, 1062, 1511
BspDI ATCGAT 1 cut(s) 1404
BspLI GGNNCC 4 cut(s) 620, 621, 929, 1609
BspOI GCTAGC 1 cut(s) 1884
BspPI GGATC 4 cut(s) 332, 466, 727, 1028
BspT107I GGYRCC 1 cut(s) 927
BsrFI RCCGGY 1 cut(s) 1949
BsrI ACTGG 9 cut(s) 381, 550, 671, 672, 1132, 1157, 1227, 1899, 1965
BssAI RCCGGY 1 cut(s) 1949
BssECI CCNNGG 5 cut(s) 294, 497, 1611, 2019, 2148
BssSI CACGAG 1 cut(s) 885
BssT1I CCWWGG 1 cut(s) 2019
Bst2BI CACGAG 1 cut(s) 885
Bst2UI CCWGG 6 cut(s) 108, 296, 498, 516, 1613, 2149
Bst4CI ACNGT 5 cut(s) 899, 1094, 1694, 1997, 2057
Bst6I CTCTTC 2 cut(s) 221, 1692
BstC8I GCNNGC 5 cut(s) 88, 956, 1772, 1882, 2355
BstDSI CCRYGG 1 cut(s) 2019
BstENI CCTNNNNNAGG 1 cut(s) 440
BstF5I GGATG 5 cut(s) 1136, 1469, 1710, 1760, 1903
BstH2I RGCGCY 2 cut(s) 591, 603
BstHHI GCGC 2 cut(s) 590, 602
BstMAI GTCTC 6 cut(s) 35, 252, 757, 1052, 1863, 2010
BstMWI GCNNNNNNNGC 3 cut(s) 248, 1591, 1600
BstNI CCWGG 6 cut(s) 108, 296, 498, 516, 1613, 2149
BstNSI RCATGY 2 cut(s) 1491, 2005
BstSCI CCNGG 7 cut(s) 106, 294, 496, 514, 1598, 1611, 2147
BstSFI CTRYAG 2 cut(s) 1269, 2053
BstV1I GCAGC 6 cut(s) 67, 70, 346, 349, 1057, 2285
BstV2I GAAGAC 2 cut(s) 673, 774
BstX2I RGATCY 1 cut(s) 1397
BstYI RGATCY 1 cut(s) 1397
Bsu15I ATCGAT 1 cut(s) 1404
Bsu36I CCTNAGG 1 cut(s) 624
BsuRI GGCC 1 cut(s) 1170
BsuTUI ATCGAT 1 cut(s) 1404
BtgI CCRYGG 1 cut(s) 2019
BtsCI GGATG 5 cut(s) 1136, 1469, 1710, 1760, 1903
BtsIMutI CAGTG 3 cut(s) 679, 1234, 1690
Cac8I GCNNGC 5 cut(s) 88, 956, 1772, 1882, 2355
CaiI CAGNNNCTG 1 cut(s) 362
CfoI GCGC 2 cut(s) 590, 602
Cfr10I RCCGGY 1 cut(s) 1949
Cfr13I GGNCC 4 cut(s) 346, 619, 669, 1532
ClaI ATCGAT 1 cut(s) 1404
CsiI ACCWGGT 1 cut(s) 106
Csp6I GTAC 4 cut(s) 10, 274, 736, 2126
CspAI ACCGGT 1 cut(s) 1949
CspCI CAANNNNNGTGG 2 cut(s) 458, 493
CviQI GTAC 4 cut(s) 10, 274, 736, 2126
DraI TTTAAA 1 cut(s) 1621
Eam1104I CTCTTC 2 cut(s) 221, 1692
EarI CTCTTC 2 cut(s) 221, 1692
Ecl136II GAGCTC 1 cut(s) 450
Eco130I CCWWGG 1 cut(s) 2019
Eco147I AGGCCT 1 cut(s) 1170
Eco24I GRGCYC 2 cut(s) 452, 1913
Eco47I GGWCC 4 cut(s) 346, 619, 669, 1532
Eco47III AGCGCT 1 cut(s) 589
Eco53kI GAGCTC 1 cut(s) 450
Eco57I CTGAAG 4 cut(s) 264, 351, 667, 1634
Eco81I CCTNAGG 1 cut(s) 624
Eco88I CYCGRG 1 cut(s) 2009
EcoICRI GAGCTC 1 cut(s) 450
EcoNI CCTNNNNNAGG 1 cut(s) 440
EcoO109I RGGNCCY 1 cut(s) 619
EcoRII CCWGG 6 cut(s) 106, 294, 496, 514, 1611, 2147
EcoT14I CCWWGG 1 cut(s) 2019
EcoT22I ATGCAT 2 cut(s) 1471, 2431
EcoT38I GRGCYC 2 cut(s) 452, 1913
ErhI CCWWGG 1 cut(s) 2019
FalI AAGNNNNNCTT 4 cut(s) 725, 757, 1812, 1844
FauNDI CATATG 1 cut(s) 2084
FbaI TGATCA 1 cut(s) 805
FblI GTMKAC 1 cut(s) 2052
Fnu4HI GCNGC 7 cut(s) 81, 84, 360, 363, 941, 1071, 2274
FokI GGATG 5 cut(s) 1143, 1456, 1717, 1747, 1910
FriOI GRGCYC 2 cut(s) 452, 1913
Fsp4HI GCNGC 7 cut(s) 81, 84, 360, 363, 941, 1071, 2274
FspBI CTAG 7 cut(s) 393, 786, 1029, 1778, 1881, 2177, 2201
GlaI GCGC 2 cut(s) 589, 601
GluI GCNGC 7 cut(s) 81, 84, 360, 363, 941, 1071, 2274
GsuI CTGGAG 2 cut(s) 364, 1634
HaeII RGCGCY 2 cut(s) 591, 603
HaeIII GGCC 1 cut(s) 1170
HapII CCGG 3 cut(s) 1560, 1599, 1950
HhaI GCGC 2 cut(s) 590, 602
Hin6I GCGC 2 cut(s) 588, 600
HinP1I GCGC 2 cut(s) 588, 600
HincII GTYRAC 2 cut(s) 576, 2313
HindII GTYRAC 2 cut(s) 576, 2313
HindIII AAGCTT 3 cut(s) 61, 1511, 1583
HinfI GANTC 9 cut(s) 229, 419, 678, 1101, 1735, 1757, 2189, 2207, 2405
HpaI GTTAAC 1 cut(s) 576
HpaII CCGG 3 cut(s) 1560, 1599, 1950
HphI GGTGA 5 cut(s) 122, 347, 457, 1939, 1964
Hpy166II GTNNAC 7 cut(s) 576, 664, 1161, 1690, 2053, 2252, 2313
Hpy188III TCNNGA 6 cut(s) 46, 917, 1739, 1764, 1848, 2009
Hpy8I GTNNAC 7 cut(s) 576, 664, 1161, 1690, 2053, 2252, 2313
Hpy99I CGWCG 1 cut(s) 654
HpyAV CCTTC 4 cut(s) 288, 974, 1317, 1802
HpyCH4III ACNGT 5 cut(s) 899, 1094, 1694, 1997, 2057
HpyCH4IV ACGT 2 cut(s) 935, 2455
HpyF10VI GCNNNNNNNGC 3 cut(s) 248, 1591, 1600
HpySE526I ACGT 2 cut(s) 935, 2455
HspAI GCGC 2 cut(s) 588, 600
KflI GGGWCCC 1 cut(s) 619
Ksp22I TGATCA 1 cut(s) 805
KspAI GTTAAC 1 cut(s) 576
Lsp1109I GCAGC 6 cut(s) 67, 70, 346, 349, 1057, 2285
LweI GCATC 5 cut(s) 1121, 1311, 1478, 1695, 2225
MabI ACCWGGT 1 cut(s) 106
MaeI CTAG 7 cut(s) 393, 786, 1029, 1778, 1881, 2177, 2201
MaeII ACGT 2 cut(s) 935, 2455
MaeIII GTNAC 5 cut(s) 110, 386, 548, 1088, 1997
MboII GAAGA 8 cut(s) 135, 238, 673, 779, 1591, 1709, 1798, 2382
MflI RGATCY 1 cut(s) 1397
MhlI GDGCHC 2 cut(s) 452, 1913
MlyI GAGTC 3 cut(s) 238, 687, 1744
MmeI TCCRAC 4 cut(s) 213, 219, 396, 1078
Mph1103I ATGCAT 2 cut(s) 1471, 2431
MroXI GAANNNNTTC 1 cut(s) 1793
MslI CAYNNNNRTG 3 cut(s) 330, 1425, 2306
MspA1I CMGCKG 2 cut(s) 359, 2227
MspI CCGG 3 cut(s) 1560, 1599, 1950
MspR9I CCNGG 7 cut(s) 108, 296, 498, 516, 1600, 1613, 2149
Mva1269I GAATGC 1 cut(s) 2429
MvaI CCWGG 6 cut(s) 108, 296, 498, 516, 1613, 2149
MwoI GCNNNNNNNGC 3 cut(s) 248, 1591, 1600
NciI CCSGG 1 cut(s) 1600
NcoI CCATGG 1 cut(s) 2019
NdeI CATATG 1 cut(s) 2084
NheI GCTAGC 1 cut(s) 1880
NlaIV GGNNCC 4 cut(s) 620, 621, 929, 1609
NmuCI GTSAC 3 cut(s) 110, 548, 1088
NsiI ATGCAT 2 cut(s) 1471, 2431
NspI RCATGY 2 cut(s) 1491, 2005
OliI CACNNNNGTG 1 cut(s) 330
PceI AGGCCT 1 cut(s) 1170
PciI ACATGT 1 cut(s) 2001
PcsI WCGNNNNNNNCGW 2 cut(s) 1410, 1419
PctI GAATGC 1 cut(s) 2429
PdmI GAANNNNTTC 1 cut(s) 1793
PfeI GAWTC 6 cut(s) 419, 1101, 1757, 2189, 2207, 2405
PflFI GACNNNGTC 1 cut(s) 1446
PinAI ACCGGT 1 cut(s) 1949
PkrI GCNGC 7 cut(s) 82, 85, 361, 364, 942, 1072, 2275
PleI GAGTC 3 cut(s) 237, 686, 1743
PpsI GAGTC 3 cut(s) 237, 686, 1743
PpuMI RGGWCCY 1 cut(s) 619
PscI ACATGT 1 cut(s) 2001
PshBI ATTAAT 1 cut(s) 2183
PsiI TTATAA 1 cut(s) 1542
Psp124BI GAGCTC 1 cut(s) 452
Psp5II RGGWCCY 1 cut(s) 619
Psp6I CCWGG 6 cut(s) 106, 294, 496, 514, 1611, 2147
PspGI CCWGG 6 cut(s) 106, 294, 496, 514, 1611, 2147
PspN4I GGNNCC 4 cut(s) 620, 621, 929, 1609
PspPI GGNCC 4 cut(s) 346, 619, 669, 1532
PspPPI RGGWCCY 1 cut(s) 619
PstNI CAGNNNCTG 1 cut(s) 362
PsuI RGATCY 1 cut(s) 1397
PsyI GACNNNGTC 1 cut(s) 1446
PvuII CAGCTG 2 cut(s) 359, 2227
RsaI GTAC 4 cut(s) 11, 275, 737, 2127
RsaNI GTAC 4 cut(s) 10, 274, 736, 2126
RseI CAYNNNNRTG 3 cut(s) 330, 1425, 2306
SacI GAGCTC 1 cut(s) 452
SatI GCNGC 7 cut(s) 81, 84, 360, 363, 941, 1071, 2274
Sau96I GGNCC 4 cut(s) 346, 619, 669, 1532
ScaI AGTACT 1 cut(s) 2127
SchI GAGTC 3 cut(s) 238, 687, 1744
ScrFI CCNGG 7 cut(s) 108, 296, 498, 516, 1600, 1613, 2149
SduI GDGCHC 2 cut(s) 452, 1913
SexAI ACCWGGT 1 cut(s) 106
SfaNI GCATC 5 cut(s) 1121, 1311, 1478, 1695, 2225
SfcI CTRYAG 2 cut(s) 1269, 2053
SgrAI CRCCGGYG 1 cut(s) 1949
SinI GGWCC 4 cut(s) 346, 619, 669, 1532
SmiMI CAYNNNNRTG 3 cut(s) 330, 1425, 2306
SmlI CTYRAG 4 cut(s) 32, 731, 1164, 1818
SmoI CTYRAG 4 cut(s) 32, 731, 1164, 1818
SpeI ACTAGT 1 cut(s) 1028
SseBI AGGCCT 1 cut(s) 1170
SsiI CCGC 2 cut(s) 713, 940
SspI AATATT 2 cut(s) 42, 1844
SspMI CTAG 7 cut(s) 393, 786, 1029, 1778, 1881, 2177, 2201
SstI GAGCTC 1 cut(s) 452
StuI AGGCCT 1 cut(s) 1170
StyD4I CCNGG 7 cut(s) 106, 294, 496, 514, 1598, 1611, 2147
StyI CCWWGG 1 cut(s) 2019
TaaI ACNGT 5 cut(s) 899, 1094, 1694, 1997, 2057
TaiI ACGT 2 cut(s) 938, 2458
TaqI TCGA 6 cut(s) 489, 722, 1404, 1413, 2122, 2281
TatI WGTACW 3 cut(s) 9, 735, 2125
TauI GCSGC 1 cut(s) 943
TfiI GAWTC 6 cut(s) 419, 1101, 1757, 2189, 2207, 2405
TscAI CASTG 3 cut(s) 679, 1234, 1697
TseFI GTSAC 3 cut(s) 110, 548, 1088
TseI GCWGC 6 cut(s) 80, 83, 359, 362, 1070, 2273
Tsp45I GTSAC 3 cut(s) 110, 548, 1088
TspGWI ACGGA 2 cut(s) 1161, 1462
TspRI CASTG 3 cut(s) 679, 1234, 1697
Tth111I GACNNNGTC 1 cut(s) 1446
VpaK11BI GGWCC 4 cut(s) 346, 619, 669, 1532
VspI ATTAAT 1 cut(s) 2183
XagI CCTNNNNNAGG 1 cut(s) 440
XapI RAATTY 3 cut(s) 235, 1917, 2028
XceI RCATGY 2 cut(s) 1491, 2005
XmiI GTMKAC 1 cut(s) 2052
XmnI GAANNNNTTC 1 cut(s) 1793
XspI CTAG 7 cut(s) 393, 786, 1029, 1778, 1881, 2177, 2201
ZrmI AGTACT 1 cut(s) 2127
Zsp2I ATGCAT 2 cut(s) 1471, 2431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.