RLG00000032823

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
19461530 .. 19465301
3772 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032823

Sequence Viewer

Length: 408 bp
ATGAGCAGGAACAACACATTGAAGGTTACTCACAGAGATGGGGATGCTCTGGTGCTCTACTCTGCTGATTCGGAGACTAGCAGTGGTGATGCTGTGGCTACTCTTATGGATGATGGGAATTTTGTGCTGCGAGAAGTGAACTCTGATGGATTGGCGAAGAGGGTTTTGTGGCAGAGTTTTGATTATCCTGGAGATGTGCTTCTGCCAGGCATGAAATTAGGGGTTAACCGTAGTAATGGCCGCAATTGGTCACTGTCGTGCTGGTTTACTGAGAGAAGTGCGGTGCCAGGACCTTTCACTCTTGAATGGGACCCTGATGATTCAACTAGATGCCAGCAGCTACATTGGAACAAACGTTTCAACATAATTGAAGGAATTGCTCAAGGTTTGGTTTACTTGCACAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

136

Amino Acids

15.19

Weight (kDa)

5.52

Isoelectric Point (pI)

52.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 3 - 88 6.2e-19 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 283
AciI CCGC 2 cut(s) 241, 281
AclI AACGTT 1 cut(s) 355
AcoI YGGCCR 1 cut(s) 238
AcsI RAATTY 1 cut(s) 118
AgsI TTSAA 5 cut(s) 22, 305, 324, 361, 371
AjnI CCWGG 3 cut(s) 187, 205, 286
AleI CACNNNNGTG 1 cut(s) 256
AluBI AGCT 1 cut(s) 340
AluI AGCT 1 cut(s) 340
Alw21I GWGCWC 1 cut(s) 57
Alw26I GTCTC 1 cut(s) 68
AoxI GGCC 1 cut(s) 238
ApeKI GCWGC 2 cut(s) 127, 337
ApoI RAATTY 1 cut(s) 118
AspS9I GGNCC 2 cut(s) 290, 310
AsuHPI GGTGA 1 cut(s) 98
AvaII GGWCC 2 cut(s) 290, 310
BanI GGYRCC 1 cut(s) 283
Bbv12I GWGCWC 1 cut(s) 57
BbvI GCAGC 2 cut(s) 114, 349
BccI CCATC 3 cut(s) 32, 107, 140
BciT130I CCWGG 3 cut(s) 189, 207, 288
BcoDI GTCTC 1 cut(s) 68
BfaI CTAG 2 cut(s) 78, 327
BisI GCNGC 3 cut(s) 128, 241, 338
BlsI GCNGC 3 cut(s) 129, 242, 339
Bme1390I CCNGG 3 cut(s) 189, 207, 288
Bme18I GGWCC 2 cut(s) 290, 310
BmgT120I GGNCC 2 cut(s) 290, 310
BmiI GGNNCC 3 cut(s) 285, 311, 312
BmrFI CCNGG 3 cut(s) 189, 207, 288
BmsI GCATC 3 cut(s) 34, 79, 320
BpmI CTGGAG 1 cut(s) 210
BpuEI CTTGAG 1 cut(s) 366
BseBI CCWGG 3 cut(s) 189, 207, 288
BseGI GGATG 2 cut(s) 49, 115
BseMII CTCAG 1 cut(s) 261
BseXI GCAGC 2 cut(s) 114, 349
BshFI GGCC 1 cut(s) 240
BshNI GGYRCC 1 cut(s) 283
BsiHKAI GWGCWC 1 cut(s) 57
BslFI GGGAC 1 cut(s) 323
BsmAI GTCTC 1 cut(s) 68
BsmFI GGGAC 1 cut(s) 323
BsnI GGCC 1 cut(s) 240
Bsp1286I GDGCHC 1 cut(s) 57
BspACI CCGC 2 cut(s) 241, 281
BspANI GGCC 1 cut(s) 240
BspCNI CTCAG 1 cut(s) 262
BspLI GGNNCC 3 cut(s) 285, 311, 312
BspT107I GGYRCC 1 cut(s) 283
Bst2UI CCWGG 3 cut(s) 189, 207, 288
Bst4CI ACNGT 2 cut(s) 230, 255
Bst6I CTCTTC 1 cut(s) 152
BstC8I GCNNGC 1 cut(s) 335
BstDEI CTNAG 1 cut(s) 270
BstF5I GGATG 2 cut(s) 49, 115
BstMAI GTCTC 1 cut(s) 68
BstNI CCWGG 3 cut(s) 189, 207, 288
BstSCI CCNGG 3 cut(s) 187, 205, 286
BstV1I GCAGC 2 cut(s) 114, 349
BsuRI GGCC 1 cut(s) 240
BtsCI GGATG 2 cut(s) 49, 115
BtsI GCAGTG 1 cut(s) 88
BtsIMutI CAGTG 2 cut(s) 88, 251
Cac8I GCNNGC 1 cut(s) 335
Cfr13I GGNCC 2 cut(s) 290, 310
CviAII CATG 1 cut(s) 211
CviJI RGCY 3 cut(s) 98, 240, 340
CviKI_1 RGCY 3 cut(s) 98, 240, 340
DdeI CTNAG 1 cut(s) 270
EaeI YGGCCR 1 cut(s) 238
Eam1104I CTCTTC 1 cut(s) 152
EarI CTCTTC 1 cut(s) 152
Eco47I GGWCC 2 cut(s) 290, 310
EcoO109I RGGNCCY 2 cut(s) 290, 310
EcoRII CCWGG 3 cut(s) 187, 205, 286
FaeI CATG 1 cut(s) 214
FaiI YATR 3 cut(s) 107, 212, 365
FaqI GGGAC 1 cut(s) 323
FatI CATG 1 cut(s) 210
Fnu4HI GCNGC 3 cut(s) 128, 241, 338
FokI GGATG 2 cut(s) 56, 122
Fsp4HI GCNGC 3 cut(s) 128, 241, 338
FspBI CTAG 2 cut(s) 78, 327
GluI GCNGC 3 cut(s) 128, 241, 338
GsuI CTGGAG 1 cut(s) 210
HaeIII GGCC 1 cut(s) 240
Hin1II CATG 1 cut(s) 214
HincII GTYRAC 1 cut(s) 226
HindII GTYRAC 1 cut(s) 226
HinfI GANTC 2 cut(s) 68, 320
HpaI GTTAAC 1 cut(s) 226
HphI GGTGA 1 cut(s) 98
Hpy166II GTNNAC 4 cut(s) 139, 226, 267, 394
Hpy188I TCNGA 2 cut(s) 73, 145
Hpy188III TCNNGA 1 cut(s) 302
Hpy8I GTNNAC 4 cut(s) 139, 226, 267, 394
HpyAV CCTTC 2 cut(s) 16, 365
HpyCH4III ACNGT 2 cut(s) 230, 255
HpyCH4IV ACGT 1 cut(s) 355
HpyCH4V TGCA 1 cut(s) 400
HpyF3I CTNAG 1 cut(s) 270
HpySE526I ACGT 1 cut(s) 355
Hsp92II CATG 1 cut(s) 214
KflI GGGWCCC 1 cut(s) 310
KspAI GTTAAC 1 cut(s) 226
Lsp1109I GCAGC 2 cut(s) 114, 349
LweI GCATC 3 cut(s) 34, 79, 320
MaeI CTAG 2 cut(s) 78, 327
MaeII ACGT 1 cut(s) 355
MaeIII GTNAC 2 cut(s) 25, 249
MboII GAAGA 1 cut(s) 169
MfeI CAATTG 1 cut(s) 244
MhlI GDGCHC 1 cut(s) 57
MluCI AATT 5 cut(s) 118, 215, 244, 366, 375
MnlI CCTC 1 cut(s) 153
MseI TTAA 1 cut(s) 225
MslI CAYNNNNRTG 2 cut(s) 36, 256
MspR9I CCNGG 3 cut(s) 189, 207, 288
MunI CAATTG 1 cut(s) 244
MvaI CCWGG 3 cut(s) 189, 207, 288
NlaIII CATG 1 cut(s) 214
NlaIV GGNNCC 3 cut(s) 285, 311, 312
NmuCI GTSAC 1 cut(s) 249
OliI CACNNNNGTG 1 cut(s) 256
PfeI GAWTC 2 cut(s) 68, 320
PfoI TCCNGGA 1 cut(s) 187
PkrI GCNGC 3 cut(s) 129, 242, 339
PpuMI RGGWCCY 2 cut(s) 290, 310
Psp1406I AACGTT 1 cut(s) 355
Psp5II RGGWCCY 2 cut(s) 290, 310
Psp6I CCWGG 3 cut(s) 187, 205, 286
PspGI CCWGG 3 cut(s) 187, 205, 286
PspN4I GGNNCC 3 cut(s) 285, 311, 312
PspPI GGNCC 2 cut(s) 290, 310
PspPPI RGGWCCY 2 cut(s) 290, 310
RseI CAYNNNNRTG 2 cut(s) 36, 256
SaqAI TTAA 1 cut(s) 225
SatI GCNGC 3 cut(s) 128, 241, 338
Sau96I GGNCC 2 cut(s) 290, 310
ScrFI CCNGG 3 cut(s) 189, 207, 288
SduI GDGCHC 1 cut(s) 57
SetI ASST 5 cut(s) 27, 295, 342, 358, 388
SfaNI GCATC 3 cut(s) 34, 79, 320
SinI GGWCC 2 cut(s) 290, 310
SmiMI CAYNNNNRTG 2 cut(s) 36, 256
SmlI CTYRAG 1 cut(s) 381
SmoI CTYRAG 1 cut(s) 381
Sse9I AATT 5 cut(s) 118, 215, 244, 366, 375
SsiI CCGC 2 cut(s) 241, 281
SspMI CTAG 2 cut(s) 78, 327
StyD4I CCNGG 3 cut(s) 187, 205, 286
TaaI ACNGT 2 cut(s) 230, 255
TaiI ACGT 1 cut(s) 358
TasI AATT 5 cut(s) 118, 215, 244, 366, 375
TauI GCSGC 1 cut(s) 243
TfiI GAWTC 2 cut(s) 68, 320
Tru1I TTAA 1 cut(s) 225
Tru9I TTAA 1 cut(s) 225
TscAI CASTG 2 cut(s) 88, 258
TseFI GTSAC 1 cut(s) 249
TseI GCWGC 2 cut(s) 127, 337
Tsp45I GTSAC 1 cut(s) 249
TspDTI ATGAA 1 cut(s) 227
TspRI CASTG 2 cut(s) 88, 258
VpaK11BI GGWCC 2 cut(s) 290, 310
XapI RAATTY 1 cut(s) 118
XspI CTAG 2 cut(s) 78, 327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.