MD10G1207000.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
30655217 .. 30658610
3394 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1207000.v1.1.491

Sequence Viewer

Length: 2049 bp
ATGGCTATAGGTTCAGTGATCAAGTACGCAATTATCTTGTTTTGTTTTGCAACCTTGTGGACTTGTCATGATGCAATGGACACGTTGAAACCAGGGGACACTCTCAACTCCACAAGCTCCCTACTTTCGGCATCTGGATCGTTCACTCTGAATTTCGTTGAACTTGGTAGTCCCGATAACAGTTTTCTTGCTATCCTGCGTGTTAAAAGTAAAGCAAACAGAGCATGGATTGCCAACCGAGACACACCTTTTTCATCCTCTTCATCCCCAATTCTTACGTTGGACTTGAATAACGTACTGAAGATTACTCGCCAAGATGGAGATCCTGTTGTCCTTTCAGCCGCTCCATATATTAATGACACTAGAACTAGTGTTGCGGCTACCCTTTTGGATTCCGGCAATTTTGTACTACAAGAAGTGAACTCTGTCAGTGGATCAACGATCCGTATTTTGTGGCAAAGTTTTGATTATCCATTCGACACATTTTTACCAGGCATGAAATTGGGTGTTGATCATAGAAATGGCCTCTATTGGTCTCTTTCATCATGGGGATCTACGAACAATCCCATGCCACCAGGGCCTTACAGCCTTTTTTGGGACACCAATGGTCACCAACTGAATATCAAGCGAAATGGGATTGTGTATTGGAAAAGCGGGGTGTTTGCAGATGGGAGATTTGAATTTATTTTCCCTGATGTGTCCAAGCAAAGGTACAATTTCAGCATTGTTTCAAATCAAGATGAAGACTACCTCACATATACTAGTTTAAATGATCCTAGTGATTCTGAGCCAGAATGGGTGCTATTCACCAGGGGGGCGCTTTTTGAGTATGGTGCATCAGTTGCCATCGTAGAAGCGCAGACCTGTGATGGCTATAATGTCATCAGAGGATGCGTGAGGAGGGACCGACATTGTATTGGGGAAGCTGGTGATGACTTTCAGCTCAAAAGCGGTTACTTCAAGGTAATCAACTCTAGTACTTCAAGACCTCCCAACTGGATTGGTACTGGCAGTGAGGATTGTAAACTTACTTGCTGGCAAGATTGTGACTGCCTTGGATTCGACTTTCCATCTGGTAATCCGACTACTGGTGCAGGAAGCCGATTTTGGAGCGTGGACTGTGCATTCATTGAAGACTTCACTGCAAATACCAGTTTCGTTTTGCTGTCACCACAATCACCAGATTCACCACCTCCGGAAAAGATTCATGCAACACAGAGGTGGTTCTGGATTGGCACTTCTATTGCTGCTGCTTTACTCGTAATGGGGTTTTGCATCTTGGGCTATCGCCTGAGAAGAACAGAATTTATGGGAAATTTGGCAACGGGACAAGAAGTAGTTGTGAAGAAGCTTTCAAAGTGTTCTGAACAAGGCAAAGAGGATTTTAAGAATGAATTAATACTCATCTATCAACTCCAACATATAAACCTTGTACAGCTCGTTGGATTTTGCATTCATGAAGAGGAAAGGATGCTGATATACGAGTACAAGGGCTTGGACTCCTTTTTATTTGATTCCACCAGAGGTCAGCAACTAGATTGGACAAAGCGCTTTACAATAATTGAAGGAATTGCTCAAGGAATGCTTTACTTGCACAAATACTCGAGGAAGAAAGTGATTCATAGAGATTTGAAAGCCAGTAATATACTACTTGACGATCATATGAACCCCAAAATTTCAGATTTTGGTATGGCAAGGATTTTCACTCAGGAACTTGGTTATATGCCTCCTGAGTATGCCATGGGAGGAAACTTCTCCGTTAAGTCTGATGTCTACAGCTACGGAGTGTTGCTGCTTGAAATTATAAGCGGTAGGAAATACAATAGCTCCTCCAATGAAGATCGAGAGCTCAACTTAGTAGGACATGCATGGGAGTTATGGAAAGCAGGTAGAGGGGAAGAACTAAGGGATCCAACACTAATCGAAACATCCATTAGAGGTCAATTGTTAAGATGTATCCAAGTCGGTCTACTATGCGTGGAGGAAAATGCAGCCGGTCGGCCAGACATGTCGAAGGCTGTATCCATGTTAACAAACGACCTTTTTTGA

Protein Analysis

683

Amino Acids

76.47

Weight (kDa)

5.39

Isoelectric Point (pI)

38.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 183 2.7e-23 D-mannose binding lectin
Pkinase PF00069 440 - 619 2.1e-31 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 442 - 613 5e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1805
Acc36I ACCTGC 1 cut(s) 1877
AccBSI CCGCTC 1 cut(s) 344
AccI GTMKAC 2 cut(s) 1773, 1969
AccIII TCCGGA 1 cut(s) 1195
AciI CCGC 5 cut(s) 342, 377, 654, 951, 1809
AclWI GGATC 8 cut(s) 145, 317, 436, 442, 559, 767, 1904, 1917
AcoI YGGCCR 1 cut(s) 2000
AcsI RAATTY 5 cut(s) 151, 680, 1304, 1315, 1674
AcuI CTGAAG 1 cut(s) 320
AfaI GTAC 8 cut(s) 26, 297, 408, 713, 979, 1006, 1434, 1487
AfeI AGCGCT 1 cut(s) 1550
AfiI CCNNNNNNNGG 4 cut(s) 127, 595, 708, 1088
AflIII ACRYGT 2 cut(s) 81, 2007
AhlI ACTAGT 2 cut(s) 368, 761
AjnI CCWGG 4 cut(s) 91, 490, 574, 809
AjuI GAANNNNNNNTTGG 2 cut(s) 1090, 1122
AleI CACNNNNGTG 1 cut(s) 1219
AluBI AGCT 8 cut(s) 117, 926, 943, 1351, 1438, 1779, 1827, 1849
AluI AGCT 8 cut(s) 117, 926, 943, 1351, 1438, 1779, 1827, 1849
Alw21I GWGCWC 1 cut(s) 1851
Alw26I GTCTC 2 cut(s) 234, 540
AlwI GGATC 8 cut(s) 145, 317, 436, 442, 559, 767, 1904, 1917
Ama87I CYCGRG 1 cut(s) 1603
Aor13HI TCCGGA 1 cut(s) 1195
Aor51HI AGCGCT 1 cut(s) 1550
AoxI GGCC 3 cut(s) 523, 578, 2000
ApeKI GCWGC 4 cut(s) 1247, 1250, 1792, 1991
ApoI RAATTY 5 cut(s) 151, 680, 1304, 1315, 1674
AseI ATTAAT 2 cut(s) 354, 1397
Asp700I GAANNNNTTC 1 cut(s) 1203
AspLEI GCGC 3 cut(s) 820, 859, 1551
AspS9I GGNCC 2 cut(s) 578, 904
AsuHPI GGTGA 6 cut(s) 602, 799, 941, 1161, 1170, 1179
AvaI CYCGRG 1 cut(s) 1603
AvaII GGWCC 1 cut(s) 904
BamHI GGATCC 1 cut(s) 1909
BanII GRGCYC 1 cut(s) 1851
BbsI GAAGAC 2 cut(s) 750, 1140
Bbv12I GWGCWC 1 cut(s) 1851
BbvI GCAGC 4 cut(s) 1234, 1237, 1779, 2003
BccI CCATC 5 cut(s) 311, 662, 854, 863, 1078
BcgI CGANNNNNNTGC 2 cut(s) 120, 154
BciT130I CCWGG 4 cut(s) 93, 492, 576, 811
BciVI GTATCC 2 cut(s) 1967, 2032
BclI TGATCA 2 cut(s) 18, 511
BcoDI GTCTC 2 cut(s) 234, 540
BcuI ACTAGT 2 cut(s) 368, 761
BfaI CTAG 6 cut(s) 363, 369, 762, 777, 975, 1535
BfmI CTRYAG 2 cut(s) 6, 1774
BfoI RGCGCY 2 cut(s) 821, 1552
BfuAI ACCTGC 1 cut(s) 1877
BfuI GTATCC 2 cut(s) 1967, 2032
BglI GCCNNNNNGGC 1 cut(s) 577
BisI GCNGC 6 cut(s) 342, 378, 1248, 1251, 1793, 1992
BlsI GCNGC 6 cut(s) 343, 379, 1249, 1252, 1794, 1993
BmcAI AGTACT 1 cut(s) 979
Bme1390I CCNGG 4 cut(s) 93, 492, 576, 811
Bme18I GGWCC 1 cut(s) 904
BmeT110I CYCGRG 1 cut(s) 1603
BmgT120I GGNCC 2 cut(s) 578, 904
BmiI GGNNCC 2 cut(s) 905, 1911
BmrFI CCNGG 4 cut(s) 93, 492, 576, 811
BmsI GCATC 6 cut(s) 61, 140, 845, 881, 1284, 1461
BpiI GAAGAC 2 cut(s) 750, 1140
BpuEI CTTGAG 1 cut(s) 1560
BsaBI GATNNNNATC 1 cut(s) 321
BsaI GGTCTC 1 cut(s) 540
BsaJI CCNNGG 5 cut(s) 92, 575, 810, 1054, 1740
BsaWI WCCGGW 1 cut(s) 1195
BsaXI ACNNNNNCTCC 4 cut(s) 312, 342, 1811, 1841
Bsc4I CCNNNNNNNGG 4 cut(s) 127, 595, 708, 1088
Bse118I RCCGGY 1 cut(s) 1994
Bse1I ACTGG 5 cut(s) 1001, 1012, 1093, 1152, 1638
Bse3DI GCAATG 1 cut(s) 81
Bse8I GATNNNNATC 1 cut(s) 321
BseAI TCCGGA 1 cut(s) 1195
BseBI CCWGG 4 cut(s) 93, 492, 576, 811
BseDI CCNNGG 5 cut(s) 92, 575, 810, 1054, 1740
BseGI GGATG 5 cut(s) 254, 263, 896, 1476, 1928
BseJI GATNNNNATC 1 cut(s) 321
BseLI CCNNNNNNNGG 4 cut(s) 127, 595, 708, 1088
BseMI GCAATG 1 cut(s) 81
BseMII CTCAG 4 cut(s) 777, 1283, 1721, 1722
BseNI ACTGG 5 cut(s) 1001, 1012, 1093, 1152, 1638
BseRI GAGGAG 2 cut(s) 913, 1819
BseXI GCAGC 4 cut(s) 1234, 1237, 1779, 2003
BsgI GTGCAG 1 cut(s) 1113
Bsh1285I CGRYCG 1 cut(s) 1999
BshFI GGCC 3 cut(s) 525, 580, 2002
BsiEI CGRYCG 1 cut(s) 1999
BsiHKAI GWGCWC 1 cut(s) 1851
BsiHKCI CYCGRG 1 cut(s) 1603
BsiSI CCGG 3 cut(s) 396, 1196, 1995
BslFI GGGAC 5 cut(s) 110, 156, 611, 917, 1341
BslI CCNNNNNNNGG 4 cut(s) 127, 595, 708, 1088
BsmAI GTCTC 2 cut(s) 234, 540
BsmFI GGGAC 5 cut(s) 110, 156, 611, 917, 1341
BsmI GAATGC 3 cut(s) 1124, 1452, 1587
BsnI GGCC 3 cut(s) 525, 580, 2002
Bso31I GGTCTC 1 cut(s) 540
BsoBI CYCGRG 1 cut(s) 1603
Bsp1286I GDGCHC 1 cut(s) 1851
Bsp13I TCCGGA 1 cut(s) 1195
Bsp1407I TGTACA 1 cut(s) 1432
Bsp19I CCATGG 1 cut(s) 1740
BspACI CCGC 5 cut(s) 342, 377, 654, 951, 1809
BspANI GGCC 3 cut(s) 525, 580, 2002
BspCNI CTCAG 4 cut(s) 778, 1284, 1720, 1723
BspEI TCCGGA 1 cut(s) 1195
BspHI TCATGA 2 cut(s) 67, 1456
BspLI GGNNCC 2 cut(s) 905, 1911
BspMI ACCTGC 1 cut(s) 1877
BspPI GGATC 8 cut(s) 145, 317, 436, 442, 559, 767, 1904, 1917
BspTNI GGTCTC 1 cut(s) 540
BsrBI CCGCTC 1 cut(s) 344
BsrDI GCAATG 1 cut(s) 81
BsrFI RCCGGY 1 cut(s) 1994
BsrGI TGTACA 1 cut(s) 1432
BsrI ACTGG 5 cut(s) 1001, 1012, 1093, 1152, 1638
BssAI RCCGGY 1 cut(s) 1994
BssECI CCNNGG 5 cut(s) 92, 575, 810, 1054, 1740
BssT1I CCWWGG 2 cut(s) 1054, 1740
Bst2UI CCWGG 4 cut(s) 93, 492, 576, 811
Bst4CI ACNGT 2 cut(s) 182, 1121
Bst6I CTCTTC 2 cut(s) 265, 1455
BstAPI GCANNNNNTGC 2 cut(s) 230, 842
BstAUI TGTACA 1 cut(s) 1432
BstC8I GCNNGC 1 cut(s) 1037
BstDEI CTNAG 6 cut(s) 786, 1292, 1707, 1731, 1855, 1904
BstDSI CCRYGG 1 cut(s) 1740
BstEII GGTNACC 1 cut(s) 608
BstF5I GGATG 5 cut(s) 254, 263, 896, 1476, 1928
BstH2I RGCGCY 2 cut(s) 821, 1552
BstHHI GCGC 3 cut(s) 820, 859, 1551
BstMAI GTCTC 2 cut(s) 234, 540
BstMCI CGRYCG 1 cut(s) 1999
BstMWI GCNNNNNNNGC 6 cut(s) 221, 230, 577, 842, 1281, 1591
BstNI CCWGG 4 cut(s) 93, 492, 576, 811
BstNSI RCATGY 2 cut(s) 1868, 2011
BstPI GGTNACC 1 cut(s) 608
BstSCI CCNGG 4 cut(s) 91, 490, 574, 809
BstSFI CTRYAG 2 cut(s) 6, 1774
BstV1I GCAGC 4 cut(s) 1234, 1237, 1779, 2003
BstV2I GAAGAC 2 cut(s) 750, 1140
BstX2I RGATCY 3 cut(s) 322, 551, 1909
BstYI RGATCY 3 cut(s) 322, 551, 1909
BsuI GTATCC 2 cut(s) 1967, 2032
BsuRI GGCC 3 cut(s) 525, 580, 2002
BtgI CCRYGG 1 cut(s) 1740
BtsCI GGATG 5 cut(s) 254, 263, 896, 1476, 1928
BtsI GCAGTG 2 cut(s) 1018, 1140
BtsIMutI CAGTG 4 cut(s) 21, 436, 1018, 1140
BveI ACCTGC 1 cut(s) 1877
Cac8I GCNNGC 1 cut(s) 1037
CciI TCATGA 2 cut(s) 67, 1456
CfoI GCGC 3 cut(s) 820, 859, 1551
Cfr10I RCCGGY 1 cut(s) 1994
Cfr13I GGNCC 2 cut(s) 578, 904
Csp6I GTAC 8 cut(s) 25, 296, 407, 712, 978, 1005, 1433, 1486
CviQI GTAC 8 cut(s) 25, 296, 407, 712, 978, 1005, 1433, 1486
DdeI CTNAG 6 cut(s) 786, 1292, 1707, 1731, 1855, 1904
DraI TTTAAA 1 cut(s) 768
EaeI YGGCCR 1 cut(s) 2000
Eam1104I CTCTTC 2 cut(s) 265, 1455
EarI CTCTTC 2 cut(s) 265, 1455
Ecl136II GAGCTC 1 cut(s) 1849
Eco130I CCWWGG 2 cut(s) 1054, 1740
Eco24I GRGCYC 1 cut(s) 1851
Eco31I GGTCTC 1 cut(s) 540
Eco47I GGWCC 1 cut(s) 904
Eco47III AGCGCT 1 cut(s) 1550
Eco53kI GAGCTC 1 cut(s) 1849
Eco57I CTGAAG 1 cut(s) 320
Eco88I CYCGRG 1 cut(s) 1603
Eco91I GGTNACC 1 cut(s) 608
EcoICRI GAGCTC 1 cut(s) 1849
EcoO109I RGGNCCY 1 cut(s) 578
EcoO65I GGTNACC 1 cut(s) 608
EcoRII CCWGG 4 cut(s) 91, 490, 574, 809
EcoT14I CCWWGG 2 cut(s) 1054, 1740
EcoT22I ATGCAT 1 cut(s) 1870
EcoT38I GRGCYC 1 cut(s) 1851
ErhI CCWWGG 2 cut(s) 1054, 1740
FalI AAGNNNNNCTT 2 cut(s) 1569, 1601
FaqI GGGAC 5 cut(s) 110, 156, 611, 917, 1341
FauI CCCGC 1 cut(s) 647
FauNDI CATATG 1 cut(s) 1662
FbaI TGATCA 2 cut(s) 18, 511
FblI GTMKAC 2 cut(s) 1773, 1969
Fnu4HI GCNGC 6 cut(s) 342, 378, 1248, 1251, 1793, 1992
FokI GGATG 5 cut(s) 241, 250, 903, 1483, 1915
FriOI GRGCYC 1 cut(s) 1851
Fsp4HI GCNGC 6 cut(s) 342, 378, 1248, 1251, 1793, 1992
FspBI CTAG 6 cut(s) 363, 369, 762, 777, 975, 1535
GlaI GCGC 3 cut(s) 819, 858, 1550
GluI GCNGC 6 cut(s) 342, 378, 1248, 1251, 1793, 1992
HaeII RGCGCY 2 cut(s) 821, 1552
HaeIII GGCC 3 cut(s) 525, 580, 2002
HapII CCGG 3 cut(s) 396, 1196, 1995
HhaI GCGC 3 cut(s) 820, 859, 1551
Hin6I GCGC 3 cut(s) 818, 857, 1549
HinP1I GCGC 3 cut(s) 818, 857, 1549
HincII GTYRAC 1 cut(s) 2031
HindII GTYRAC 1 cut(s) 2031
HindIII AAGCTT 1 cut(s) 1349
HinfI GANTC 8 cut(s) 392, 782, 1059, 1184, 1204, 1499, 1514, 1618
HpaI GTTAAC 1 cut(s) 2031
HpaII CCGG 3 cut(s) 396, 1196, 1995
HphI GGTGA 6 cut(s) 602, 799, 941, 1161, 1170, 1179
Hpy166II GTNNAC 8 cut(s) 60, 144, 421, 1025, 1117, 1774, 1970, 2031
Hpy188I TCNGA 7 cut(s) 150, 787, 887, 1083, 1366, 1681, 1768
Hpy8I GTNNAC 8 cut(s) 60, 144, 421, 1025, 1117, 1774, 1970, 2031
HpyAV CCTTC 2 cut(s) 1559, 2008
HpyCH4III ACNGT 2 cut(s) 182, 1121
HpyCH4IV ACGT 3 cut(s) 83, 278, 294
HpyF10VI GCNNNNNNNGC 6 cut(s) 221, 230, 577, 842, 1281, 1591
HpyF3I CTNAG 6 cut(s) 786, 1292, 1707, 1731, 1855, 1904
HpySE526I ACGT 3 cut(s) 83, 278, 294
HspAI GCGC 3 cut(s) 818, 857, 1549
Kpn2I TCCGGA 1 cut(s) 1195
Ksp22I TGATCA 2 cut(s) 18, 511
KspAI GTTAAC 1 cut(s) 2031
LmnI GCTCC 4 cut(s) 122, 349, 1110, 1832
Lsp1109I GCAGC 4 cut(s) 1234, 1237, 1779, 2003
LweI GCATC 6 cut(s) 61, 140, 845, 881, 1284, 1461
MaeI CTAG 6 cut(s) 363, 369, 762, 777, 975, 1535
MaeII ACGT 3 cut(s) 83, 278, 294
MaeIII GTNAC 4 cut(s) 608, 953, 1046, 1167
MbiI CCGCTC 1 cut(s) 344
MfeI CAATTG 1 cut(s) 1943
MflI RGATCY 3 cut(s) 322, 551, 1909
MhlI GDGCHC 1 cut(s) 1851
MlyI GAGTC 1 cut(s) 1493
MmeI TCCRAC 5 cut(s) 261, 1106, 1423, 1441, 1937
Mph1103I ATGCAT 1 cut(s) 1870
MroI TCCGGA 1 cut(s) 1195
MroXI GAANNNNTTC 1 cut(s) 1203
MseI TTAA 8 cut(s) 204, 354, 767, 1386, 1397, 1761, 1949, 2030
MslI CAYNNNNRTG 2 cut(s) 519, 1219
MspI CCGG 3 cut(s) 396, 1196, 1995
MspR9I CCNGG 4 cut(s) 93, 492, 576, 811
MunI CAATTG 1 cut(s) 1943
Mva1269I GAATGC 3 cut(s) 1124, 1452, 1587
MvaI CCWGG 4 cut(s) 93, 492, 576, 811
MwoI GCNNNNNNNGC 6 cut(s) 221, 230, 577, 842, 1281, 1591
NcoI CCATGG 1 cut(s) 1740
NdeI CATATG 1 cut(s) 1662
NlaIV GGNNCC 2 cut(s) 905, 1911
NmuCI GTSAC 3 cut(s) 608, 1046, 1167
NsiI ATGCAT 1 cut(s) 1870
NspI RCATGY 2 cut(s) 1868, 2011
OliI CACNNNNGTG 1 cut(s) 1219
PaeR7I CTCGAG 1 cut(s) 1603
PagI TCATGA 2 cut(s) 67, 1456
PciI ACATGT 1 cut(s) 2007
PctI GAATGC 3 cut(s) 1124, 1452, 1587
PdmI GAANNNNTTC 1 cut(s) 1203
PfeI GAWTC 7 cut(s) 392, 782, 1059, 1184, 1204, 1514, 1618
PkrI GCNGC 6 cut(s) 343, 379, 1249, 1252, 1794, 1993
PleI GAGTC 1 cut(s) 1493
PpsI GAGTC 1 cut(s) 1493
PscI ACATGT 1 cut(s) 2007
PshBI ATTAAT 2 cut(s) 354, 1397
PsiI TTATAA 1 cut(s) 1805
Psp124BI GAGCTC 1 cut(s) 1851
Psp6I CCWGG 4 cut(s) 91, 490, 574, 809
PspEI GGTNACC 1 cut(s) 608
PspGI CCWGG 4 cut(s) 91, 490, 574, 809
PspN4I GGNNCC 2 cut(s) 905, 1911
PspPI GGNCC 2 cut(s) 578, 904
PspXI VCTCGAGB 1 cut(s) 1603
PsuI RGATCY 3 cut(s) 322, 551, 1909
RsaI GTAC 8 cut(s) 26, 297, 408, 713, 979, 1006, 1434, 1487
RsaNI GTAC 8 cut(s) 25, 296, 407, 712, 978, 1005, 1433, 1486
RseI CAYNNNNRTG 2 cut(s) 519, 1219
SacI GAGCTC 1 cut(s) 1851
SaqAI TTAA 8 cut(s) 204, 354, 767, 1386, 1397, 1761, 1949, 2030
SatI GCNGC 6 cut(s) 342, 378, 1248, 1251, 1793, 1992
Sau96I GGNCC 2 cut(s) 578, 904
ScaI AGTACT 1 cut(s) 979
SchI GAGTC 1 cut(s) 1493
ScrFI CCNGG 4 cut(s) 93, 492, 576, 811
SduI GDGCHC 1 cut(s) 1851
SfaNI GCATC 6 cut(s) 61, 140, 845, 881, 1284, 1461
SfcI CTRYAG 2 cut(s) 6, 1774
Sfr274I CTCGAG 1 cut(s) 1603
SinI GGWCC 1 cut(s) 904
SlaI CTCGAG 1 cut(s) 1603
SmiMI CAYNNNNRTG 2 cut(s) 519, 1219
SmlI CTYRAG 2 cut(s) 1575, 1603
SmoI CTYRAG 2 cut(s) 1575, 1603
SpeI ACTAGT 2 cut(s) 368, 761
SsiI CCGC 5 cut(s) 342, 377, 654, 951, 1809
SspMI CTAG 6 cut(s) 363, 369, 762, 777, 975, 1535
SstI GAGCTC 1 cut(s) 1851
StyD4I CCNGG 4 cut(s) 91, 490, 574, 809
StyI CCWWGG 2 cut(s) 1054, 1740
TaaI ACNGT 2 cut(s) 182, 1121
TaiI ACGT 3 cut(s) 86, 281, 297
TaqI TCGA 6 cut(s) 477, 1062, 1604, 1843, 1923, 2012
TaqII GACCGA 2 cut(s) 921, 1955
TatI WGTACW 4 cut(s) 406, 977, 1432, 1485
TauI GCSGC 2 cut(s) 344, 380
TfiI GAWTC 7 cut(s) 392, 782, 1059, 1184, 1204, 1514, 1618
Tru1I TTAA 8 cut(s) 204, 354, 767, 1386, 1397, 1761, 1949, 2030
Tru9I TTAA 8 cut(s) 204, 354, 767, 1386, 1397, 1761, 1949, 2030
TscAI CASTG 4 cut(s) 21, 436, 1018, 1147
TseFI GTSAC 3 cut(s) 608, 1046, 1167
TseI GCWGC 4 cut(s) 1247, 1250, 1792, 1991
Tsp45I GTSAC 3 cut(s) 608, 1046, 1167
TspGWI ACGGA 3 cut(s) 434, 1747, 1797
TspRI CASTG 4 cut(s) 21, 436, 1018, 1147
VpaK11BI GGWCC 1 cut(s) 904
VspI ATTAAT 2 cut(s) 354, 1397
XapI RAATTY 5 cut(s) 151, 680, 1304, 1315, 1674
XceI RCATGY 2 cut(s) 1868, 2011
XhoI CTCGAG 1 cut(s) 1603
XmiI GTMKAC 2 cut(s) 1773, 1969
XmnI GAANNNNTTC 1 cut(s) 1203
XspI CTAG 6 cut(s) 363, 369, 762, 777, 975, 1535
ZrmI AGTACT 1 cut(s) 979
Zsp2I ATGCAT 1 cut(s) 1870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.