Rw5G016140

protein serine/threonine kinase activity

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
20185173 .. 20195816
10644 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G016140.1

Sequence Viewer

Length: 285 bp
ATGGAACATGATATAAGCGTTTTCAGCTACACATTTGTTCTGGCTGCCACAAGCAACTTCTCCGATGAAAACAAGCTCGATGAAGGGGGGTTTGGATCTGTTTATCAGACATCGGAGCTATGGAAAAAAGGTGCAGCGCTAGAGCTGATCGATCCAATACTAGGCAATTCCTGTGATGAGGATCAATTGTTAAGATGCATCCATGCCGGTCTGCTCTGTGTGGAAGAGAATGCAACCGATCGGTCGAACATGTCGGATCTCATATCTATATATGTTGACAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

94

Amino Acids

10.41

Weight (kDa)

4.2

Isoelectric Point (pI)

33.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 4 cut(s) 103, 146, 189, 264
AfeI AGCGCT 1 cut(s) 138
AfiI CCNNNNNNNGG 1 cut(s) 161
AflIII ACRYGT 1 cut(s) 249
AjuI GAANNNNNNNTTGG 2 cut(s) 75, 107
AluBI AGCT 4 cut(s) 27, 76, 118, 145
AluI AGCT 4 cut(s) 27, 76, 118, 145
AlwI GGATC 4 cut(s) 103, 146, 189, 264
Aor51HI AGCGCT 1 cut(s) 138
ApeKI GCWGC 2 cut(s) 44, 134
AspLEI GCGC 1 cut(s) 139
BbvI GCAGC 2 cut(s) 31, 146
BfaI CTAG 2 cut(s) 140, 161
BfoI RGCGCY 1 cut(s) 140
BisI GCNGC 2 cut(s) 45, 135
BlsI GCNGC 2 cut(s) 46, 136
BmsI GCATC 2 cut(s) 185, 207
Bsa29I ATCGAT 1 cut(s) 150
BsaBI GATNNNNATC 1 cut(s) 180
Bsc4I CCNNNNNNNGG 1 cut(s) 161
Bse118I RCCGGY 1 cut(s) 206
Bse8I GATNNNNATC 1 cut(s) 180
BseCI ATCGAT 1 cut(s) 150
BseGI GGATG 1 cut(s) 198
BseJI GATNNNNATC 1 cut(s) 180
BseLI CCNNNNNNNGG 1 cut(s) 161
BseXI GCAGC 2 cut(s) 31, 146
BsgI GTGCAG 1 cut(s) 153
Bsh1285I CGRYCG 2 cut(s) 241, 245
BshVI ATCGAT 1 cut(s) 150
BsiEI CGRYCG 2 cut(s) 241, 245
BsiSI CCGG 1 cut(s) 207
BslI CCNNNNNNNGG 1 cut(s) 161
BsmI GAATGC 1 cut(s) 235
Bsp143I GATC 6 cut(s) 95, 147, 151, 181, 238, 256
BspDI ATCGAT 1 cut(s) 150
BspPI GGATC 4 cut(s) 103, 146, 189, 264
BsrFI RCCGGY 1 cut(s) 206
BssAI RCCGGY 1 cut(s) 206
BssMI GATC 6 cut(s) 95, 147, 151, 181, 238, 256
Bst6I CTCTTC 1 cut(s) 219
BstF5I GGATG 1 cut(s) 198
BstH2I RGCGCY 1 cut(s) 140
BstHHI GCGC 1 cut(s) 139
BstKTI GATC 6 cut(s) 98, 150, 154, 184, 241, 259
BstMBI GATC 6 cut(s) 95, 147, 151, 181, 238, 256
BstMCI CGRYCG 2 cut(s) 241, 245
BstMWI GCNNNNNNNGC 1 cut(s) 24
BstNSI RCATGY 1 cut(s) 253
BstV1I GCAGC 2 cut(s) 31, 146
BstX2I RGATCY 2 cut(s) 95, 256
BstYI RGATCY 2 cut(s) 95, 256
Bsu15I ATCGAT 1 cut(s) 150
BsuTUI ATCGAT 1 cut(s) 150
BtsCI GGATG 1 cut(s) 198
CfoI GCGC 1 cut(s) 139
Cfr10I RCCGGY 1 cut(s) 206
ClaI ATCGAT 1 cut(s) 150
CviAII CATG 3 cut(s) 8, 203, 250
CviJI RGCY 5 cut(s) 27, 44, 76, 118, 145
CviKI_1 RGCY 5 cut(s) 27, 44, 76, 118, 145
DpnI GATC 6 cut(s) 97, 149, 153, 183, 240, 258
DpnII GATC 6 cut(s) 95, 147, 151, 181, 238, 256
Eam1104I CTCTTC 1 cut(s) 219
EarI CTCTTC 1 cut(s) 219
Eco47III AGCGCT 1 cut(s) 138
EcoT22I ATGCAT 1 cut(s) 200
FaeI CATG 3 cut(s) 11, 206, 253
FaiI YATR 9 cut(s) 9, 14, 121, 204, 251, 263, 269, 271, 273
FatI CATG 3 cut(s) 7, 202, 249
Fnu4HI GCNGC 2 cut(s) 45, 135
FokI GGATG 1 cut(s) 185
Fsp4HI GCNGC 2 cut(s) 45, 135
FspBI CTAG 2 cut(s) 140, 161
GlaI GCGC 1 cut(s) 138
GluI GCNGC 2 cut(s) 45, 135
HaeII RGCGCY 1 cut(s) 140
HapII CCGG 1 cut(s) 207
HhaI GCGC 1 cut(s) 139
Hin1II CATG 3 cut(s) 11, 206, 253
Hin6I GCGC 1 cut(s) 137
HinP1I GCGC 1 cut(s) 137
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HpaII CCGG 1 cut(s) 207
Hpy166II GTNNAC 1 cut(s) 277
Hpy188I TCNGA 4 cut(s) 64, 108, 115, 256
Hpy8I GTNNAC 1 cut(s) 277
HpyAV CCTTC 1 cut(s) 77
HpyCH4V TGCA 3 cut(s) 134, 198, 233
HpyF10VI GCNNNNNNNGC 1 cut(s) 24
Hsp92II CATG 3 cut(s) 11, 206, 253
HspAI GCGC 1 cut(s) 137
Kzo9I GATC 6 cut(s) 95, 147, 151, 181, 238, 256
LmnI GCTCC 1 cut(s) 115
LpnPI CCDG 3 cut(s) 26, 184, 220
Lsp1109I GCAGC 2 cut(s) 31, 146
LweI GCATC 2 cut(s) 185, 207
MaeI CTAG 2 cut(s) 140, 161
MalI GATC 6 cut(s) 97, 149, 153, 183, 240, 258
MboI GATC 6 cut(s) 95, 147, 151, 181, 238, 256
MboII GAAGA 1 cut(s) 236
MfeI CAATTG 1 cut(s) 185
MflI RGATCY 2 cut(s) 95, 256
MluCI AATT 2 cut(s) 166, 185
MmeI TCCRAC 1 cut(s) 234
MnlI CCTC 1 cut(s) 172
Mph1103I ATGCAT 1 cut(s) 200
MseI TTAA 1 cut(s) 191
MspI CCGG 1 cut(s) 207
MunI CAATTG 1 cut(s) 185
Mva1269I GAATGC 1 cut(s) 235
MwoI GCNNNNNNNGC 1 cut(s) 24
NdeII GATC 6 cut(s) 95, 147, 151, 181, 238, 256
NlaIII CATG 3 cut(s) 11, 206, 253
NsiI ATGCAT 1 cut(s) 200
NspI RCATGY 1 cut(s) 253
PciI ACATGT 1 cut(s) 249
PctI GAATGC 1 cut(s) 235
PkrI GCNGC 2 cut(s) 46, 136
Ple19I CGATCG 1 cut(s) 241
PscI ACATGT 1 cut(s) 249
PsuI RGATCY 2 cut(s) 95, 256
PvuI CGATCG 1 cut(s) 241
SaqAI TTAA 1 cut(s) 191
SatI GCNGC 2 cut(s) 45, 135
Sau3AI GATC 6 cut(s) 95, 147, 151, 181, 238, 256
SetI ASST 5 cut(s) 29, 78, 120, 133, 147
SfaNI GCATC 2 cut(s) 185, 207
Sse9I AATT 2 cut(s) 166, 185
SspMI CTAG 2 cut(s) 140, 161
TaqI TCGA 3 cut(s) 78, 150, 245
TaqII GACCGA 1 cut(s) 231
TasI AATT 2 cut(s) 166, 185
Tru1I TTAA 1 cut(s) 191
Tru9I TTAA 1 cut(s) 191
TseI GCWGC 2 cut(s) 44, 134
TspDTI ATGAA 2 cut(s) 81, 96
XceI RCATGY 1 cut(s) 253
XspI CTAG 2 cut(s) 140, 161
Zsp2I ATGCAT 1 cut(s) 200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.