MD10G1207300.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
30678018 .. 30682119
4102 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1207300.v1.1.491

Sequence Viewer

Length: 369 bp
ATGGAGGACCTCTTTTCCATAAAATCTTATGTTTATAGTTTTGGAGTGTTAATGCTTGAAATTGTAAGCTGTAGGAGAAACAATAGCTTCTACAATGCTGTTCGCCCGCTTAATATAGTAGGATATGCTTGGGGGTTATGGAAAGATGGTGCATGGCTACAATTAATGGATCCAGTGGTAGGCGATTCATGTACTGAAAATCAGTTGATAAGATGCATCAATGTTGATCTGCTATGCGTGGAAGAAGATGCAGCTGATCGGCCCACCATGTCCGATGTCATATCTATGTTGACAAATGAAAGCACGCCATTACCCGTACCAACAAGGCCAGCAGTTTTTACAGGAAGAAAAGAGGTTGAAGTAAGTTAA

Protein Analysis

123

Amino Acids

13.72

Weight (kDa)

4.5

Isoelectric Point (pI)

53.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 107
AclWI GGATC 2 cut(s) 164, 177
AfaI GTAC 2 cut(s) 193, 318
AfiI CCNNNNNNNGG 1 cut(s) 179
AgsI TTSAA 2 cut(s) 59, 359
AluBI AGCT 3 cut(s) 69, 87, 254
AluI AGCT 3 cut(s) 69, 87, 254
AlwI GGATC 2 cut(s) 164, 177
AoxI GGCC 2 cut(s) 260, 326
ApeKI GCWGC 1 cut(s) 251
AseI ATTAAT 1 cut(s) 164
AspS9I GGNCC 2 cut(s) 7, 261
AvaII GGWCC 1 cut(s) 7
BamHI GGATCC 1 cut(s) 169
BbvI GCAGC 1 cut(s) 263
BccI CCATC 1 cut(s) 140
BfmI CTRYAG 1 cut(s) 70
BisI GCNGC 1 cut(s) 252
BlsI GCNGC 1 cut(s) 253
Bme18I GGWCC 1 cut(s) 7
BmgT120I GGNCC 2 cut(s) 7, 261
BmiI GGNNCC 1 cut(s) 171
BmsI GCATC 3 cut(s) 203, 225, 238
Bsc4I CCNNNNNNNGG 1 cut(s) 179
Bse1I ACTGG 1 cut(s) 173
BseLI CCNNNNNNNGG 1 cut(s) 179
BseNI ACTGG 1 cut(s) 173
BseXI GCAGC 1 cut(s) 263
BshFI GGCC 2 cut(s) 262, 328
BslI CCNNNNNNNGG 1 cut(s) 179
BsnI GGCC 2 cut(s) 262, 328
Bsp143I GATC 3 cut(s) 169, 226, 256
BspACI CCGC 1 cut(s) 107
BspANI GGCC 2 cut(s) 262, 328
BspLI GGNNCC 1 cut(s) 171
BspPI GGATC 2 cut(s) 164, 177
BsrI ACTGG 1 cut(s) 173
BssMI GATC 3 cut(s) 169, 226, 256
BstC8I GCNNGC 3 cut(s) 107, 305, 330
BstKTI GATC 3 cut(s) 172, 229, 259
BstMBI GATC 3 cut(s) 169, 226, 256
BstSFI CTRYAG 1 cut(s) 70
BstV1I GCAGC 1 cut(s) 263
BstX2I RGATCY 1 cut(s) 169
BstYI RGATCY 1 cut(s) 169
BsuRI GGCC 2 cut(s) 262, 328
BtsIMutI CAGTG 1 cut(s) 180
Cac8I GCNNGC 3 cut(s) 107, 305, 330
Cfr13I GGNCC 2 cut(s) 7, 261
Csp6I GTAC 2 cut(s) 192, 317
CviAII CATG 3 cut(s) 153, 189, 268
CviJI RGCY 6 cut(s) 69, 87, 157, 254, 262, 328
CviKI_1 RGCY 6 cut(s) 69, 87, 157, 254, 262, 328
CviQI GTAC 2 cut(s) 192, 317
DpnI GATC 3 cut(s) 171, 228, 258
DpnII GATC 3 cut(s) 169, 226, 256
Eco47I GGWCC 1 cut(s) 7
EcoO109I RGGNCCY 1 cut(s) 7
EcoT22I ATGCAT 1 cut(s) 218
FaeI CATG 3 cut(s) 156, 192, 271
FatI CATG 3 cut(s) 152, 188, 267
FauI CCCGC 1 cut(s) 114
Fnu4HI GCNGC 1 cut(s) 252
Fsp4HI GCNGC 1 cut(s) 252
GluI GCNGC 1 cut(s) 252
HaeIII GGCC 2 cut(s) 262, 328
Hin1II CATG 3 cut(s) 156, 192, 271
HincII GTYRAC 1 cut(s) 291
HindII GTYRAC 1 cut(s) 291
HinfI GANTC 1 cut(s) 185
Hpy166II GTNNAC 1 cut(s) 291
Hpy188I TCNGA 1 cut(s) 274
Hpy8I GTNNAC 1 cut(s) 291
HpyCH4V TGCA 3 cut(s) 152, 216, 251
Hsp92II CATG 3 cut(s) 156, 192, 271
Kzo9I GATC 3 cut(s) 169, 226, 256
LpnPI CCDG 3 cut(s) 186, 327, 342
Lsp1109I GCAGC 1 cut(s) 263
LweI GCATC 3 cut(s) 203, 225, 238
MalI GATC 3 cut(s) 171, 228, 258
MboI GATC 3 cut(s) 169, 226, 256
MboII GAAGA 3 cut(s) 254, 257, 357
MflI RGATCY 1 cut(s) 169
MluCI AATT 2 cut(s) 60, 161
MnlI CCTC 2 cut(s) 20, 346
Mph1103I ATGCAT 1 cut(s) 218
MseI TTAA 4 cut(s) 50, 111, 164, 367
MslI CAYNNNNRTG 1 cut(s) 284
MspA1I CMGCKG 1 cut(s) 254
NdeII GATC 3 cut(s) 169, 226, 256
NlaIII CATG 3 cut(s) 156, 192, 271
NlaIV GGNNCC 1 cut(s) 171
NsiI ATGCAT 1 cut(s) 218
PfeI GAWTC 1 cut(s) 185
PkrI GCNGC 1 cut(s) 253
PpuMI RGGWCCY 1 cut(s) 7
PshBI ATTAAT 1 cut(s) 164
Psp5II RGGWCCY 1 cut(s) 7
PspN4I GGNNCC 1 cut(s) 171
PspPI GGNCC 2 cut(s) 7, 261
PspPPI RGGWCCY 1 cut(s) 7
PsuI RGATCY 1 cut(s) 169
PvuII CAGCTG 1 cut(s) 254
RsaI GTAC 2 cut(s) 193, 318
RsaNI GTAC 2 cut(s) 192, 317
RseI CAYNNNNRTG 1 cut(s) 284
SaqAI TTAA 4 cut(s) 50, 111, 164, 367
SatI GCNGC 1 cut(s) 252
Sau3AI GATC 3 cut(s) 169, 226, 256
Sau96I GGNCC 2 cut(s) 7, 261
SetI ASST 5 cut(s) 12, 71, 89, 256, 357
SfaNI GCATC 3 cut(s) 203, 225, 238
SfcI CTRYAG 1 cut(s) 70
SinI GGWCC 1 cut(s) 7
SmiMI CAYNNNNRTG 1 cut(s) 284
Sse9I AATT 2 cut(s) 60, 161
SsiI CCGC 1 cut(s) 107
TasI AATT 2 cut(s) 60, 161
TatI WGTACW 1 cut(s) 191
TfiI GAWTC 1 cut(s) 185
Tru1I TTAA 4 cut(s) 50, 111, 164, 367
Tru9I TTAA 4 cut(s) 50, 111, 164, 367
TscAI CASTG 1 cut(s) 180
TseI GCWGC 1 cut(s) 251
TspDTI ATGAA 2 cut(s) 177, 312
TspRI CASTG 1 cut(s) 180
VpaK11BI GGWCC 1 cut(s) 7
VspI ATTAAT 1 cut(s) 164
Zsp2I ATGCAT 1 cut(s) 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.