RLG00000032819

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
19381115 .. 19382340
1226 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032819

Sequence Viewer

Length: 936 bp
ATGGCCTATCACGGACCATCAATTCAGGGAAAATTGTCGTCAGGGCGAGAAGTAGCTGTAAAGAGGCTTTCAAGTTGTTCGGGGCAAGGAGAAGTACAGTTTAAGAATGAATTGATTCTCATATCTGAACTCCAACATACTAATCTTGTTCAGCTTTTCGGATTTTGCATTCATGGTGAAGAGAGGATGCTAATATACGAGTATATGCCAAACAAAGATCTGGACTATATATTATTTGATTCAACCAGACGCATGCTACTGGATTGGAAGAAACGTTTCAATATAATTGAAGGAATCGCCCAAGGATTGCTTTACTTGCACAAGTACTCTAGATTAAAAGTAATTCATAGAGATCTTAAAGCTAGTAACATACTACTTGATGAAAATATGAACCCCAAAATTTCTGATTTTGGAACGGCAAGGAGTTTCATGCTTAATGAAGTTGAAGCAAGTACTGGACGGATTGTTGGGACACATGGTTACATGTCTCCCGAGTCTGCTATGCAGGGAATTTTTTCTGGAAAATCTGATGTCTTCAGTTTTGGAGTGTTGATGCTCGAAATCATAAGTGGTAGGAAAAACAACAGGTTTCACAGTGCTCATCGCGCGCTCAATTTAGTAGGATATGCGTGGGAATTATGGCAAGAAGGTGCAGGACTAGAACTGATGGACACAACACTAAGTGATTCGTGTTTGGAAAATCAATTTTTAAGATGCACCCATGTTGGTCTACTATGTGTCGAAGAAGATGCAGAACTTCGGCCTACCATGTCAGATGCCATATCTATGTTGACAAATGAAAGCTTGCCTTTACCTATACCAATAAGACCAGTATGTTTTCCAGTAAGGCATTCGGCTGGAGTTGACATAAGAGGAAACAAATCCGAAATTATATCAGCAAATGGCCTGTCCAGCTCCCTTGTTATAGGACGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

312

Amino Acids

34.86

Weight (kDa)

6.37

Isoelectric Point (pI)

46.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 13 - 259 3.3e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 13 - 196 3.5e-36 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 730
AccII CGCG 2 cut(s) 606, 608
AclI AACGTT 1 cut(s) 274
AcsI RAATTY 2 cut(s) 399, 510
AcuI CTGAAG 1 cut(s) 520
AdeI CACNNNGTG 1 cut(s) 683
AfaI GTAC 3 cut(s) 96, 326, 454
AflIII ACRYGT 1 cut(s) 483
AgsI TTSAA 5 cut(s) 72, 243, 280, 290, 446
AluBI AGCT 5 cut(s) 56, 154, 362, 804, 915
AluI AGCT 5 cut(s) 56, 154, 362, 804, 915
Alw21I GWGCWC 1 cut(s) 601
Alw26I GTCTC 1 cut(s) 492
Ama87I CYCGRG 1 cut(s) 491
AoxI GGCC 3 cut(s) 3, 761, 904
ApoI RAATTY 2 cut(s) 399, 510
ArsI GACNNNNNNTTYG 2 cut(s) 893, 925
Asp700I GAANNNNTTC 3 cut(s) 114, 275, 514
AspLEI GCGC 2 cut(s) 608, 610
AspS9I GGNCC 1 cut(s) 14
AsuHPI GGTGA 1 cut(s) 188
AvaI CYCGRG 1 cut(s) 491
AvaII GGWCC 1 cut(s) 14
BbsI GAAGAC 1 cut(s) 526
Bbv12I GWGCWC 1 cut(s) 601
BccI CCATC 2 cut(s) 25, 661
BceAI ACGGC 1 cut(s) 432
BcgI CGANNNNNNTGC 2 cut(s) 731, 765
BcoDI GTCTC 1 cut(s) 492
BfaI CTAG 3 cut(s) 330, 363, 659
BglII AGATCT 2 cut(s) 217, 352
BmcAI AGTACT 2 cut(s) 326, 454
Bme18I GGWCC 1 cut(s) 14
BmeT110I CYCGRG 1 cut(s) 491
BmgT120I GGNCC 1 cut(s) 14
BmsI GCATC 5 cut(s) 177, 543, 704, 739, 766
BpiI GAAGAC 1 cut(s) 526
BpmI CTGGAG 1 cut(s) 879
BsaJI CCNNGG 1 cut(s) 301
Bse1I ACTGG 4 cut(s) 264, 460, 830, 842
BseDI CCNNGG 1 cut(s) 301
BseGI GGATG 1 cut(s) 192
BseNI ACTGG 4 cut(s) 264, 460, 830, 842
BsePI GCGCGC 1 cut(s) 606
BsgI GTGCAG 1 cut(s) 672
Bsh1236I CGCG 2 cut(s) 606, 608
BshFI GGCC 3 cut(s) 5, 763, 906
BsiHKAI GWGCWC 1 cut(s) 601
BsiHKCI CYCGRG 1 cut(s) 491
BslFI GGGAC 1 cut(s) 484
BsmAI GTCTC 1 cut(s) 492
BsmFI GGGAC 1 cut(s) 484
BsmI GAATGC 2 cut(s) 168, 850
BsnI GGCC 3 cut(s) 5, 763, 906
BsoBI CYCGRG 1 cut(s) 491
Bsp1286I GDGCHC 1 cut(s) 601
Bsp143I GATC 2 cut(s) 217, 352
BspANI GGCC 3 cut(s) 5, 763, 906
BspFNI CGCG 2 cut(s) 606, 608
BsrI ACTGG 4 cut(s) 264, 460, 830, 842
BssECI CCNNGG 1 cut(s) 301
BssHII GCGCGC 1 cut(s) 606
BssMI GATC 2 cut(s) 217, 352
BssT1I CCWWGG 1 cut(s) 301
Bst4CI ACNGT 2 cut(s) 99, 596
Bst6I CTCTTC 1 cut(s) 174
BstC8I GCNNGC 3 cut(s) 254, 608, 806
BstDEI CTNAG 1 cut(s) 680
BstF5I GGATG 1 cut(s) 192
BstFNI CGCG 2 cut(s) 606, 608
BstHHI GCGC 2 cut(s) 608, 610
BstKTI GATC 2 cut(s) 220, 355
BstMAI GTCTC 1 cut(s) 492
BstMBI GATC 2 cut(s) 217, 352
BstMWI GCNNNNNNNGC 3 cut(s) 316, 605, 912
BstNSI RCATGY 2 cut(s) 256, 487
BstUI CGCG 2 cut(s) 606, 608
BstV2I GAAGAC 1 cut(s) 526
BstX2I RGATCY 2 cut(s) 217, 352
BstYI RGATCY 2 cut(s) 217, 352
BsuRI GGCC 3 cut(s) 5, 763, 906
BtgZI GCGATG 1 cut(s) 587
BtsCI GGATG 1 cut(s) 192
BtsIMutI CAGTG 1 cut(s) 601
Cac8I GCNNGC 3 cut(s) 254, 608, 806
CfoI GCGC 2 cut(s) 608, 610
Cfr13I GGNCC 1 cut(s) 14
CseI GACGC 1 cut(s) 258
Csp6I GTAC 3 cut(s) 95, 325, 453
CviAII CATG 7 cut(s) 173, 253, 430, 476, 484, 722, 769
CviQI GTAC 3 cut(s) 95, 325, 453
DdeI CTNAG 1 cut(s) 680
DpnI GATC 2 cut(s) 219, 354
DpnII GATC 2 cut(s) 217, 352
DraIII CACNNNGTG 1 cut(s) 683
Eam1104I CTCTTC 1 cut(s) 174
EarI CTCTTC 1 cut(s) 174
Eco130I CCWWGG 1 cut(s) 301
Eco47I GGWCC 1 cut(s) 14
Eco57I CTGAAG 1 cut(s) 520
Eco88I CYCGRG 1 cut(s) 491
EcoT14I CCWWGG 1 cut(s) 301
ErhI CCWWGG 1 cut(s) 301
FaeI CATG 7 cut(s) 176, 256, 433, 479, 487, 725, 772
FalI AAGNNNNNCTT 4 cut(s) 294, 326, 793, 825
FaqI GGGAC 1 cut(s) 484
FatI CATG 7 cut(s) 172, 252, 429, 475, 483, 721, 768
FblI GTMKAC 1 cut(s) 730
FokI GGATG 1 cut(s) 199
FspBI CTAG 3 cut(s) 330, 363, 659
GlaI GCGC 2 cut(s) 607, 609
GsuI CTGGAG 1 cut(s) 879
HaeIII GGCC 3 cut(s) 5, 763, 906
HgaI GACGC 1 cut(s) 258
HhaI GCGC 2 cut(s) 608, 610
Hin1II CATG 7 cut(s) 176, 256, 433, 479, 487, 725, 772
Hin6I GCGC 2 cut(s) 606, 608
HinP1I GCGC 2 cut(s) 606, 608
HincII GTYRAC 2 cut(s) 792, 865
HindII GTYRAC 2 cut(s) 792, 865
HindIII AAGCTT 1 cut(s) 802
HinfI GANTC 5 cut(s) 115, 239, 294, 494, 686
HphI GGTGA 1 cut(s) 188
Hpy166II GTNNAC 3 cut(s) 731, 792, 865
Hpy188I TCNGA 6 cut(s) 127, 161, 406, 529, 775, 886
Hpy188III TCNNGA 4 cut(s) 221, 330, 491, 519
Hpy8I GTNNAC 3 cut(s) 731, 792, 865
HpyAV CCTTC 2 cut(s) 284, 641
HpyCH4III ACNGT 2 cut(s) 99, 596
HpyCH4IV ACGT 1 cut(s) 274
HpyCH4V TGCA 6 cut(s) 168, 319, 505, 653, 717, 752
HpyF10VI GCNNNNNNNGC 3 cut(s) 316, 605, 912
HpyF3I CTNAG 1 cut(s) 680
HpySE526I ACGT 1 cut(s) 274
Hsp92II CATG 7 cut(s) 176, 256, 433, 479, 487, 725, 772
HspAI GCGC 2 cut(s) 606, 608
Kzo9I GATC 2 cut(s) 217, 352
LmnI GCTCC 1 cut(s) 920
LweI GCATC 5 cut(s) 177, 543, 704, 739, 766
MaeI CTAG 3 cut(s) 330, 363, 659
MaeII ACGT 1 cut(s) 274
MaeIII GTNAC 2 cut(s) 365, 479
MalI GATC 2 cut(s) 219, 354
MboI GATC 2 cut(s) 217, 352
MboII GAAGA 5 cut(s) 191, 280, 526, 755, 758
MflI RGATCY 2 cut(s) 217, 352
MhlI GDGCHC 1 cut(s) 601
MlyI GAGTC 1 cut(s) 503
MmeI TCCRAC 1 cut(s) 157
MnlI CCTC 3 cut(s) 57, 177, 866
MroXI GAANNNNTTC 3 cut(s) 114, 275, 514
MseI TTAA 5 cut(s) 102, 335, 357, 435, 710
MslI CAYNNNNRTG 1 cut(s) 785
Mva1269I GAATGC 2 cut(s) 168, 850
MvnI CGCG 2 cut(s) 606, 608
MwoI GCNNNNNNNGC 3 cut(s) 316, 605, 912
NdeII GATC 2 cut(s) 217, 352
NlaIII CATG 7 cut(s) 176, 256, 433, 479, 487, 725, 772
NspI RCATGY 2 cut(s) 256, 487
PaeI GCATGC 1 cut(s) 256
PauI GCGCGC 1 cut(s) 606
PciI ACATGT 1 cut(s) 483
PctI GAATGC 2 cut(s) 168, 850
PdmI GAANNNNTTC 3 cut(s) 114, 275, 514
PfeI GAWTC 4 cut(s) 115, 239, 294, 686
PleI GAGTC 1 cut(s) 502
PpsI GAGTC 1 cut(s) 502
PscI ACATGT 1 cut(s) 483
Psp1406I AACGTT 1 cut(s) 274
PspPI GGNCC 1 cut(s) 14
PsuI RGATCY 2 cut(s) 217, 352
PteI GCGCGC 1 cut(s) 606
RsaI GTAC 3 cut(s) 96, 326, 454
RsaNI GTAC 3 cut(s) 95, 325, 453
RseI CAYNNNNRTG 1 cut(s) 785
SaqAI TTAA 5 cut(s) 102, 335, 357, 435, 710
Sau3AI GATC 2 cut(s) 217, 352
Sau96I GGNCC 1 cut(s) 14
ScaI AGTACT 2 cut(s) 326, 454
SchI GAGTC 1 cut(s) 503
SduI GDGCHC 1 cut(s) 601
SetI ASST 9 cut(s) 58, 156, 277, 364, 590, 652, 806, 817, 917
SfaNI GCATC 5 cut(s) 177, 543, 704, 739, 766
SinI GGWCC 1 cut(s) 14
SmiMI CAYNNNNRTG 1 cut(s) 785
SphI GCATGC 1 cut(s) 256
SspMI CTAG 3 cut(s) 330, 363, 659
StyI CCWWGG 1 cut(s) 301
TaaI ACNGT 2 cut(s) 99, 596
TaiI ACGT 1 cut(s) 277
TaqI TCGA 2 cut(s) 558, 741
TatI WGTACW 3 cut(s) 94, 324, 452
TfiI GAWTC 4 cut(s) 115, 239, 294, 686
Tru1I TTAA 5 cut(s) 102, 335, 357, 435, 710
Tru9I TTAA 5 cut(s) 102, 335, 357, 435, 710
TscAI CASTG 1 cut(s) 601
TspDTI ATGAA 8 cut(s) 123, 161, 335, 396, 404, 418, 453, 813
TspGWI ACGGA 2 cut(s) 27, 475
TspRI CASTG 1 cut(s) 601
VpaK11BI GGWCC 1 cut(s) 14
XapI RAATTY 2 cut(s) 399, 510
XbaI TCTAGA 1 cut(s) 329
XceI RCATGY 2 cut(s) 256, 487
XmiI GTMKAC 1 cut(s) 730
XmnI GAANNNNTTC 3 cut(s) 114, 275, 514
XspI CTAG 3 cut(s) 330, 363, 659
ZrmI AGTACT 2 cut(s) 326, 454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.