Rroxscaffold_1G00053940

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000096
Physical Location & Seq
Reverse (-)
75175022 .. 75177634
2613 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00053940.1

Sequence Viewer

Length: 2007 bp
ATGGTTAATGTGATGATCATGTTTGCTGGTTTTCAAGATCATCAGGAGAAAGCAAAGTACCGTCTGATCATTAACCATGGGTTTAGGTTTAATCAACTCTTAATTTTCTTCCTGATCATTCTTTCAAGCTTGTGGAGTTGTTGTGTTGCTGCTGCAGCAGACAATATTCGGGACACACTCAAAATTGGCGACAGTCTCAATTCCTCAAGTGCTTTGGTTTCTGCCTCTGGGAAGTTCACTTTGCTTTTCTTGCCAAACGGTTCGAGTTCCAACTACAGCTATCTATATATTAGGCGGTACAATGTAAGTGGTGCGAATAAGGCTTGGGTTGGGAACCGAGACTCACCTGTTTTATACCCACTTGGAGTTCTTACCTTGGACTCCAACAACACATTAAAAATCATTACAAACAACGAAGGTGGCGGTGGCGATCCTCCTATAGTGCTTGGCTCCGCGCCAAAGAGTAGTAGTAATGTTGCGGCTACTCTGTCGGATTCTGGCAATTTTATCCTACAAGAGCTGAACTCCGATGGATCAATGAAGAAGGTGTGGTGGCAAAGCTTTGATTATCCAACAGACACCTTTTTACCAGGCATGAAGTTGGGTGTCAATCATAGCAATGGGCACATCTGGTCTCTTACATCATGGACATCCGCTTACTACCCACCGGCGGGGCCTTTCACTCTAGATTGGGACCCAACTGCCCGCCAAATGGAAATTCGGAGAGAAGGGGTGGTTTATTGGAGAAGCGGAAACTATAGTGCTACTACCAACAGATTCCAAAACATTTTGCCGAATGCAAAGGTTAGCTTCAAATTTAGCATTGTTTCAAATGAGAATGAAGACTACCTCACTTACAGTTCTGAAGATGGTGCATATGAGTCACCAGAATGGTTTCTAAATTTCGATGGGAGGCTTTCTAATTATTATGGAGCGGGAATTGATATTGCACGAGCAGATCAGTGTGGCGGCTACAGCACAGATGAACTAGGGTGCCAGACAAGTGGCCGGCCAACTACTTGTATGGCAGATTTCGGCAGTCCATTTGTGCCAAAAAAAGGTTATTTTCAACCAGTCACCTCGAGTTCAACTTCAAGATGCCCATACTCGCTCAACTTTGTATCAAACGGAAGTTACAGTGGTACTAGTATTGATTGTAAGAATACTTGTTTGCAAAACTGTGACTGCCTTGGATTCGACTTTCTATTTGATAATCAGACAGGATGCCGATTTTGGAGTGTGGACTGTGAATTCGTTGAAGACCGCACTCAACCTGGTAATGCAAGCAGTTTGGTTTTAACAAAGCTAATGCCAACAGCAAAATCACCAGCGCCAAAGTCACCGCCAAGCAAAAGTGGTGAGGGTGAGATCGACCAGAATGAATTGCTGAACTTCAGGAATTCTAAGAGGCCTACTGATTTGAATGGACTTCAAAATGTTGGAAAGACGGGCCATGATTTGAGCATATTTAGCTATGCATCTGTGATGGCTGCCACAATCAACTTCGCTGAAGAAAACAAGCTTGGAGAAGGCGGCTTTGGACCTGTCTATAAGGGGAAATTGGCAACGGGAGAAGAAGTAGCTGTGAAGAGGCTTTCAAAATGTTCAGGGCAAGGAACATTAGAGTTTAAGAATGAATTGATCCTCATATATGAACTTCAACACACAAACCTTGTTCAGCTTTTTGGATTTTGCATTCACGGTGAAGAGAGGATGTTGATATATGAGTACATGCCAAACAAAAGTCTGGACTACTTTTTATTTGATTCAGTCAGAGGTGTTTTTCTAGATTGGAGCAAGCGTTTCAGTATAATTGAAGGAATTGCTCAAGGATTGCTTTATTTGCACAAATTCTCAAGAACAAGAGTAATTCATAGAGATTTAAAAGCCAGTAACGTACTACTTGATGAAAATATGAAACCCAAAATTTCAGATTTTGGTATGGCTAGGATTTTCTCCATTAATGAACTGGAAGCAAATACTAGTAGGATTGTTGGGACACGGTAA

Protein Analysis

668

Amino Acids

74.17

Weight (kDa)

6.2

Isoelectric Point (pI)

36.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 109 - 216 1.2e-23 D-mannose binding lectin
Pkinase PF00069 503 - 667 5e-31 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 505 - 653 2e-32 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 993
AccBSI CCGCTC 1 cut(s) 935
AccII CGCG 1 cut(s) 455
AclWI GGATC 3 cut(s) 425, 541, 1636
AcoI YGGCCR 2 cut(s) 1006, 1010
AcsI RAATTY 7 cut(s) 717, 815, 901, 1250, 1399, 1850, 1926
AcuI CTGAAG 3 cut(s) 885, 1378, 1530
AfaI GTAC 5 cut(s) 59, 299, 1144, 1730, 1899
AfiI CCNNNNNNNGG 4 cut(s) 670, 671, 712, 1058
AhlI ACTAGT 2 cut(s) 1145, 1982
AjnI CCWGG 2 cut(s) 589, 1273
AjuI GAANNNNNNNTTGG 6 cut(s) 702, 734, 1506, 1521, 1538, 1553
Alw26I GTCTC 3 cut(s) 200, 333, 639
AlwI GGATC 3 cut(s) 425, 541, 1636
Ama87I CYCGRG 1 cut(s) 1081
AoxI GGCC 5 cut(s) 674, 1006, 1010, 1409, 1450
ApeKI GCWGC 4 cut(s) 149, 152, 155, 1490
ApoI RAATTY 7 cut(s) 717, 815, 901, 1250, 1399, 1850, 1926
ArsI GACNNNNNNTTYG 4 cut(s) 1190, 1222, 1235, 1267
AseI ATTAAT 1 cut(s) 1962
Asp700I GAANNNNTTC 1 cut(s) 894
AspLEI GCGC 2 cut(s) 457, 1333
AspS9I GGNCC 4 cut(s) 674, 694, 1450, 1541
AsuHPI GGTGA 8 cut(s) 336, 876, 1069, 1317, 1332, 1370, 1376, 1715
AvaI CYCGRG 1 cut(s) 1081
AvaII GGWCC 2 cut(s) 694, 1541
BaeGI GKGCMC 1 cut(s) 627
BanI GGYRCC 1 cut(s) 993
BauI CACGAG 1 cut(s) 951
BbsI GAAGAC 2 cut(s) 849, 1266
BbvI GCAGC 4 cut(s) 136, 139, 167, 1477
BccI CCATC 4 cut(s) 524, 863, 902, 1480
BciT130I CCWGG 2 cut(s) 591, 1275
BclI TGATCA 3 cut(s) 15, 66, 114
BcoDI GTCTC 3 cut(s) 200, 333, 639
BcuI ACTAGT 2 cut(s) 1145, 1982
BfaI CTAG 6 cut(s) 686, 989, 1146, 1787, 1947, 1983
BfmI CTRYAG 5 cut(s) 153, 274, 438, 757, 973
BfoI RGCGCY 1 cut(s) 1334
BisI GCNGC 7 cut(s) 150, 153, 156, 480, 970, 1491, 1534
BlsI GCNGC 7 cut(s) 151, 154, 157, 481, 971, 1492, 1535
Bme1390I CCNGG 2 cut(s) 591, 1275
Bme18I GGWCC 2 cut(s) 694, 1541
BmeT110I CYCGRG 1 cut(s) 1081
BmgT120I GGNCC 4 cut(s) 674, 694, 1450, 1541
BmiI GGNNCC 6 cut(s) 335, 451, 675, 695, 696, 995
BmrFI CCNGG 2 cut(s) 591, 1275
BmsI GCATC 3 cut(s) 1088, 1214, 1487
BpiI GAAGAC 2 cut(s) 849, 1266
BplI GAGNNNNNCTC 2 cut(s) 509, 541
BpuEI CTTGAG 3 cut(s) 190, 1812, 1840
BsaI GGTCTC 1 cut(s) 639
BsaJI CCNNGG 3 cut(s) 76, 375, 1189
BsaXI ACNNNNNCTCC 6 cut(s) 127, 157, 1563, 1593, 1786, 1816
Bsc4I CCNNNNNNNGG 4 cut(s) 670, 671, 712, 1058
Bse118I RCCGGY 2 cut(s) 667, 1008
Bse1I ACTGG 3 cut(s) 1073, 1890, 1974
Bse3DI GCAATG 1 cut(s) 625
BseBI CCWGG 2 cut(s) 591, 1275
BseDI CCNNGG 3 cut(s) 76, 375, 1189
BseGI GGATG 3 cut(s) 650, 1229, 1719
BseLI CCNNNNNNNGG 4 cut(s) 670, 671, 712, 1058
BseMI GCAATG 1 cut(s) 625
BseNI ACTGG 3 cut(s) 1073, 1890, 1974
BseSI GKGCMC 1 cut(s) 627
BseXI GCAGC 4 cut(s) 136, 139, 167, 1477
Bsh1236I CGCG 1 cut(s) 455
BshFI GGCC 5 cut(s) 676, 1008, 1012, 1411, 1452
BshNI GGYRCC 1 cut(s) 993
BsiHKCI CYCGRG 1 cut(s) 1081
BsiSI CCGG 2 cut(s) 668, 1009
BslFI GGGAC 2 cut(s) 185, 707
BslI CCNNNNNNNGG 4 cut(s) 670, 671, 712, 1058
BsmAI GTCTC 3 cut(s) 200, 333, 639
BsmFI GGGAC 2 cut(s) 185, 707
BsmI GAATGC 2 cut(s) 802, 1695
BsnI GGCC 5 cut(s) 676, 1008, 1012, 1411, 1452
Bso31I GGTCTC 1 cut(s) 639
BsoBI CYCGRG 1 cut(s) 1081
Bsp1286I GDGCHC 1 cut(s) 627
Bsp143I GATC 9 cut(s) 15, 37, 66, 114, 430, 533, 958, 1368, 1641
Bsp19I CCATGG 1 cut(s) 76
BspANI GGCC 5 cut(s) 676, 1008, 1012, 1411, 1452
BspFNI CGCG 1 cut(s) 455
BspLI GGNNCC 6 cut(s) 335, 451, 675, 695, 696, 995
BspMAI CTGCAG 1 cut(s) 157
BspPI GGATC 3 cut(s) 425, 541, 1636
BspT107I GGYRCC 1 cut(s) 993
BspTNI GGTCTC 1 cut(s) 639
BsrBI CCGCTC 1 cut(s) 935
BsrDI GCAATG 1 cut(s) 625
BsrFI RCCGGY 2 cut(s) 667, 1008
BsrI ACTGG 3 cut(s) 1073, 1890, 1974
BssAI RCCGGY 2 cut(s) 667, 1008
BssECI CCNNGG 3 cut(s) 76, 375, 1189
BssMI GATC 9 cut(s) 15, 37, 66, 114, 430, 533, 958, 1368, 1641
BssSI CACGAG 1 cut(s) 951
BssT1I CCWWGG 3 cut(s) 76, 375, 1189
Bst2BI CACGAG 1 cut(s) 951
Bst2UI CCWGG 2 cut(s) 591, 1275
Bst4CI ACNGT 9 cut(s) 62, 194, 260, 860, 1139, 1181, 1247, 1703, 2004
Bst6I CTCTTC 2 cut(s) 1583, 1701
BstC8I GCNNGC 4 cut(s) 706, 1010, 1285, 1799
BstDEI CTNAG 1 cut(s) 1404
BstDSI CCRYGG 1 cut(s) 76
BstF5I GGATG 3 cut(s) 650, 1229, 1719
BstFNI CGCG 1 cut(s) 455
BstH2I RGCGCY 1 cut(s) 1334
BstHHI GCGC 2 cut(s) 457, 1333
BstKTI GATC 9 cut(s) 18, 40, 69, 117, 433, 536, 961, 1371, 1644
BstMAI GTCTC 3 cut(s) 200, 333, 639
BstMBI GATC 9 cut(s) 15, 37, 66, 114, 430, 533, 958, 1368, 1641
BstMWI GCNNNNNNNGC 6 cut(s) 155, 250, 320, 975, 1470, 1843
BstNI CCWGG 2 cut(s) 591, 1275
BstNSI RCATGY 1 cut(s) 1735
BstSCI CCNGG 2 cut(s) 589, 1273
BstSFI CTRYAG 5 cut(s) 153, 274, 438, 757, 973
BstSLI GKGCMC 1 cut(s) 627
BstUI CGCG 1 cut(s) 455
BstV1I GCAGC 4 cut(s) 136, 139, 167, 1477
BstV2I GAAGAC 2 cut(s) 849, 1266
BstXI CCANNNNNNTGG 1 cut(s) 1004
BsuRI GGCC 5 cut(s) 676, 1008, 1012, 1411, 1452
BtgI CCRYGG 1 cut(s) 76
BtsCI GGATG 3 cut(s) 650, 1229, 1719
BtsIMutI CAGTG 2 cut(s) 968, 1144
Cac8I GCNNGC 4 cut(s) 706, 1010, 1285, 1799
CfoI GCGC 2 cut(s) 457, 1333
Cfr10I RCCGGY 2 cut(s) 667, 1008
Cfr13I GGNCC 4 cut(s) 674, 694, 1450, 1541
CsiI ACCWGGT 1 cut(s) 1273
Csp6I GTAC 5 cut(s) 58, 298, 1143, 1729, 1898
CspCI CAANNNNNGTGG 4 cut(s) 289, 324, 400, 435
CviAII CATG 6 cut(s) 19, 77, 595, 645, 1454, 1732
CviQI GTAC 5 cut(s) 58, 298, 1143, 1729, 1898
DdeI CTNAG 1 cut(s) 1404
DpnI GATC 9 cut(s) 17, 39, 68, 116, 432, 535, 960, 1370, 1643
DpnII GATC 9 cut(s) 15, 37, 66, 114, 430, 533, 958, 1368, 1641
DraI TTTAAA 1 cut(s) 1884
EaeI YGGCCR 2 cut(s) 1006, 1010
Eam1104I CTCTTC 2 cut(s) 1583, 1701
EarI CTCTTC 2 cut(s) 1583, 1701
Eco130I CCWWGG 3 cut(s) 76, 375, 1189
Eco147I AGGCCT 1 cut(s) 1411
Eco31I GGTCTC 1 cut(s) 639
Eco47I GGWCC 2 cut(s) 694, 1541
Eco57I CTGAAG 3 cut(s) 885, 1378, 1530
Eco88I CYCGRG 1 cut(s) 1081
EcoO109I RGGNCCY 2 cut(s) 674, 694
EcoRI GAATTC 2 cut(s) 1250, 1399
EcoRII CCWGG 2 cut(s) 589, 1273
EcoT14I CCWWGG 3 cut(s) 76, 375, 1189
EcoT22I ATGCAT 1 cut(s) 1480
ErhI CCWWGG 3 cut(s) 76, 375, 1189
FaeI CATG 6 cut(s) 22, 80, 598, 648, 1457, 1735
FalI AAGNNNNNCTT 4 cut(s) 794, 826, 1821, 1853
FaqI GGGAC 2 cut(s) 185, 707
FatI CATG 6 cut(s) 18, 76, 594, 644, 1453, 1731
FauI CCCGC 3 cut(s) 664, 713, 928
FauNDI CATATG 1 cut(s) 877
FbaI TGATCA 3 cut(s) 15, 66, 114
Fnu4HI GCNGC 7 cut(s) 150, 153, 156, 480, 970, 1491, 1534
FokI GGATG 3 cut(s) 637, 1236, 1726
FseI GGCCGGCC 1 cut(s) 1012
Fsp4HI GCNGC 7 cut(s) 150, 153, 156, 480, 970, 1491, 1534
FspBI CTAG 6 cut(s) 686, 989, 1146, 1787, 1947, 1983
GlaI GCGC 2 cut(s) 456, 1332
GluI GCNGC 7 cut(s) 150, 153, 156, 480, 970, 1491, 1534
HaeII RGCGCY 1 cut(s) 1334
HaeIII GGCC 5 cut(s) 676, 1008, 1012, 1411, 1452
HapII CCGG 2 cut(s) 668, 1009
HhaI GCGC 2 cut(s) 457, 1333
Hin1II CATG 6 cut(s) 22, 80, 598, 648, 1457, 1735
Hin6I GCGC 2 cut(s) 455, 1331
HinP1I GCGC 2 cut(s) 455, 1331
HindIII AAGCTT 3 cut(s) 127, 559, 1520
HinfI GANTC 7 cut(s) 341, 380, 494, 777, 881, 1194, 1766
HpaII CCGG 2 cut(s) 668, 1009
HphI GGTGA 8 cut(s) 336, 876, 1069, 1317, 1332, 1370, 1376, 1715
Hpy166II GTNNAC 2 cut(s) 237, 1243
Hpy188I TCNGA 8 cut(s) 66, 493, 529, 723, 865, 1218, 1775, 1933
Hpy8I GTNNAC 2 cut(s) 237, 1243
HpyAV CCTTC 5 cut(s) 410, 538, 722, 1523, 1811
HpyCH4III ACNGT 9 cut(s) 62, 194, 260, 860, 1139, 1181, 1247, 1703, 2004
HpyCH4IV ACGT 1 cut(s) 1896
HpyCH4V TGCA 9 cut(s) 155, 800, 875, 950, 1174, 1283, 1478, 1695, 1846
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 250, 320, 975, 1470, 1843
HpyF3I CTNAG 1 cut(s) 1404
HpySE526I ACGT 1 cut(s) 1896
Hsp92II CATG 6 cut(s) 22, 80, 598, 648, 1457, 1735
HspAI GCGC 2 cut(s) 455, 1331
KflI GGGWCCC 1 cut(s) 694
KroI GCCGGC 1 cut(s) 1008
KroNI GCCGGC 1 cut(s) 1010
Ksp22I TGATCA 3 cut(s) 15, 66, 114
Kzo9I GATC 9 cut(s) 15, 37, 66, 114, 430, 533, 958, 1368, 1641
LmnI GCTCC 3 cut(s) 455, 932, 1794
Lsp1109I GCAGC 4 cut(s) 136, 139, 167, 1477
LweI GCATC 3 cut(s) 1088, 1214, 1487
MabI ACCWGGT 1 cut(s) 1273
MaeI CTAG 6 cut(s) 686, 989, 1146, 1787, 1947, 1983
MaeII ACGT 1 cut(s) 1896
MaeIII GTNAC 6 cut(s) 882, 1075, 1133, 1181, 1338, 1892
MalI GATC 9 cut(s) 17, 39, 68, 116, 432, 535, 960, 1370, 1643
MbiI CCGCTC 1 cut(s) 935
MboI GATC 9 cut(s) 15, 37, 66, 114, 430, 533, 958, 1368, 1641
MboII GAAGA 9 cut(s) 100, 553, 854, 878, 1271, 1523, 1586, 1600, 1718
MhlI GDGCHC 1 cut(s) 627
MlyI GAGTC 3 cut(s) 335, 374, 890
MmeI TCCRAC 5 cut(s) 294, 408, 471, 596, 1420
Mph1103I ATGCAT 1 cut(s) 1480
MroNI GCCGGC 1 cut(s) 1008
MroXI GAANNNNTTC 1 cut(s) 894
MseI TTAA 9 cut(s) 6, 72, 90, 101, 395, 1298, 1629, 1883, 1962
MslI CAYNNNNRTG 2 cut(s) 618, 889
MspI CCGG 2 cut(s) 668, 1009
MspR9I CCNGG 2 cut(s) 591, 1275
Mva1269I GAATGC 2 cut(s) 802, 1695
MvaI CCWGG 2 cut(s) 591, 1275
MvnI CGCG 1 cut(s) 455
MwoI GCNNNNNNNGC 6 cut(s) 155, 250, 320, 975, 1470, 1843
NaeI GCCGGC 1 cut(s) 1010
NcoI CCATGG 1 cut(s) 76
NdeI CATATG 1 cut(s) 877
NdeII GATC 9 cut(s) 15, 37, 66, 114, 430, 533, 958, 1368, 1641
NgoMIV GCCGGC 1 cut(s) 1008
NlaIII CATG 6 cut(s) 22, 80, 598, 648, 1457, 1735
NlaIV GGNNCC 6 cut(s) 335, 451, 675, 695, 696, 995
NmuCI GTSAC 4 cut(s) 882, 1075, 1181, 1338
NsiI ATGCAT 1 cut(s) 1480
NspI RCATGY 1 cut(s) 1735
PaeR7I CTCGAG 1 cut(s) 1081
PceI AGGCCT 1 cut(s) 1411
PctI GAATGC 2 cut(s) 802, 1695
PdiI GCCGGC 1 cut(s) 1010
PdmI GAANNNNTTC 1 cut(s) 894
PfeI GAWTC 4 cut(s) 494, 777, 1194, 1766
PkrI GCNGC 7 cut(s) 151, 154, 157, 481, 971, 1492, 1535
PleI GAGTC 3 cut(s) 335, 374, 889
PpsI GAGTC 3 cut(s) 335, 374, 889
PpuMI RGGWCCY 1 cut(s) 694
PshBI ATTAAT 1 cut(s) 1962
Psp5II RGGWCCY 1 cut(s) 694
Psp6I CCWGG 2 cut(s) 589, 1273
PspGI CCWGG 2 cut(s) 589, 1273
PspN4I GGNNCC 6 cut(s) 335, 451, 675, 695, 696, 995
PspPI GGNCC 4 cut(s) 674, 694, 1450, 1541
PspPPI RGGWCCY 1 cut(s) 694
PspXI VCTCGAGB 1 cut(s) 1081
PstI CTGCAG 1 cut(s) 157
RigI GGCCGGCC 1 cut(s) 1012
RsaI GTAC 5 cut(s) 59, 299, 1144, 1730, 1899
RsaNI GTAC 5 cut(s) 58, 298, 1143, 1729, 1898
RseI CAYNNNNRTG 2 cut(s) 618, 889
SaqAI TTAA 9 cut(s) 6, 72, 90, 101, 395, 1298, 1629, 1883, 1962
SatI GCNGC 7 cut(s) 150, 153, 156, 480, 970, 1491, 1534
Sau3AI GATC 9 cut(s) 15, 37, 66, 114, 430, 533, 958, 1368, 1641
Sau96I GGNCC 4 cut(s) 674, 694, 1450, 1541
SchI GAGTC 3 cut(s) 335, 374, 890
ScrFI CCNGG 2 cut(s) 591, 1275
SduI GDGCHC 1 cut(s) 627
SexAI ACCWGGT 1 cut(s) 1273
SfaNI GCATC 3 cut(s) 1088, 1214, 1487
SfcI CTRYAG 5 cut(s) 153, 274, 438, 757, 973
Sfr274I CTCGAG 1 cut(s) 1081
SgrAI CRCCGGYG 1 cut(s) 667
SinI GGWCC 2 cut(s) 694, 1541
SlaI CTCGAG 1 cut(s) 1081
SmiMI CAYNNNNRTG 2 cut(s) 618, 889
SmlI CTYRAG 4 cut(s) 205, 1081, 1827, 1855
SmoI CTYRAG 4 cut(s) 205, 1081, 1827, 1855
SpeI ACTAGT 2 cut(s) 1145, 1982
SseBI AGGCCT 1 cut(s) 1411
SspI AATATT 1 cut(s) 166
SspMI CTAG 6 cut(s) 686, 989, 1146, 1787, 1947, 1983
StuI AGGCCT 1 cut(s) 1411
StyD4I CCNGG 2 cut(s) 589, 1273
StyI CCWWGG 3 cut(s) 76, 375, 1189
TaaI ACNGT 9 cut(s) 62, 194, 260, 860, 1139, 1181, 1247, 1703, 2004
TaiI ACGT 1 cut(s) 1899
TaqI TCGA 5 cut(s) 263, 906, 1082, 1197, 1371
TatI WGTACW 1 cut(s) 1728
TauI GCSGC 3 cut(s) 482, 972, 1536
TfiI GAWTC 4 cut(s) 494, 777, 1194, 1766
Tru1I TTAA 9 cut(s) 6, 72, 90, 101, 395, 1298, 1629, 1883, 1962
Tru9I TTAA 9 cut(s) 6, 72, 90, 101, 395, 1298, 1629, 1883, 1962
TscAI CASTG 2 cut(s) 968, 1144
TseFI GTSAC 4 cut(s) 882, 1075, 1181, 1338
TseI GCWGC 4 cut(s) 149, 152, 155, 1490
Tsp45I GTSAC 4 cut(s) 882, 1075, 1181, 1338
TspGWI ACGGA 1 cut(s) 1143
TspRI CASTG 2 cut(s) 968, 1144
VpaK11BI GGWCC 2 cut(s) 694, 1541
VspI ATTAAT 1 cut(s) 1962
XapI RAATTY 7 cut(s) 717, 815, 901, 1250, 1399, 1850, 1926
XbaI TCTAGA 2 cut(s) 685, 1786
XceI RCATGY 1 cut(s) 1735
XcmI CCANNNNNNNNNTGG 1 cut(s) 1966
XhoI CTCGAG 1 cut(s) 1081
XmnI GAANNNNTTC 1 cut(s) 894
XspI CTAG 6 cut(s) 686, 989, 1146, 1787, 1947, 1983
Zsp2I ATGCAT 1 cut(s) 1480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.