Rroxscaffold_1G00054520

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000096
Physical Location & Seq
Reverse (-)
75891730 .. 75894275
2546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00054520.1

Sequence Viewer

Length: 1818 bp
ATGGCTGGCGCTGTCGATTTGATTTGCTTGGTGTTTATGTGGAGCTTGTGGAGTGCTGCTTGTAATGGTGCAACAGACACTCTGAAACCAGGTGAAAGTCTAAATTCTTCAAGCTTGTTAGTTTCTGCAAATGGGAAGTTCACTATGAATTTTCGCGCTCATGAGCTTGAACCAAACCATAGCTACTTAGTTATAACGTGGAATGGGAGTCATAACTATGCGTGGGTTGCGAATAGAGAAGCATCCATTTTGTACCCTTCTGGAGCTCTTACATTGGACAGGAACAACACATTGAAGGTTACTCACAGAGATGGGGATGCTCTGGTGCTCTACTCTGCTGATTCGGAGACTATCAGTGGTGATGCTGTCGCTATTCTTATGGATGATGGGAATTTTGTGCTGCAAGAAGTGAGCTCTGATGGATCGGCGAAGATGGTTTTGTGGCAGAGTTTTGATTATCCTGGAGATGTGCTTCTGCCAGGTATGAAATTAGGGGTTAACCGTAGTAATGGCCGTAATTGGTCACTGTCGTGCTGGTTTACTGAGAGAAGTGCAGCGCCAGGACCTTTCACTCTGGATTGGGACCCTGATGGACACGACTTGAAAATTAAGCGGCGTGGGGTGGTGTATTGGAGTAGTGGAGTGTTTCGAGATGGGAGTTTTGAAAATATTAAGGAGAAGAGGTATAATTTTAGCATTGTTTCAAAGAAGAATCAAGACTATTTCAGTTACACTACTTTAGATGAAAATGCTGTATCAGAGTGGCTGCTAACCACAATAGGGCGACTAAAAGACTTTGATGAATCAATTGATATTGCAAAAGCAGATTCCTGTTATGGGTATAACACTGAAGGTGGATGCCAGATTTGGGAACAGCCAAAGTGTCGGCGTTCTAGTGCTGTATTTGAGCAACAAAATGGTTACTTTAATCCAACAGGTGCTAGCGGCACTACTGCAACATCAACAAGTGATTCAAATACAAGTCTCAGTATTAGTGACTGTAAGGCTGCTTGTTGGGCAGATTGTAACTGTATTGGATTCCTCTTTCTGTTTCCTAATCAGACTGGATGTCTGTATTGGACTGGAAACTTGAAATTCATTGCAGACAGCATAAGTTATAATTCAAATGTTGTATATGTTTTAACAACAAAGTCAGTCGACAGCAGCAGTGAGAACCAAAGAAATGTCCAGGATATGCTGAACATGATGAATTCTAATACACCTACTAATGCTAGTGGACTTCAAAATGATGGAAAGGGGGGACATGATTTAAGGGTATTTAAGTATGCGTCTATCATAGCCGCCACCTGCAACTTCTCTGATGAAAATAAGCTAGGAGAAGGCGGTTTTGGACCTGTTTATAAGGGGAAATTGGTGACCGGACAAGAAGTGGCAGTGAAGAGGCTTTCAAAACTTTCAGGACAGGGAATTTCGGAGTTTAAGAATGAGTTGATACTTATACATGAACTCCAGCATACAAACCTTGTTAAGCTCTTCGGATTTTGCATTCATGGTGAAGAGAGGATGTTGATATACGAGTACATGACAAACAAAAGCTTGGACCACTTTTTATTTGATTCAACTAGATGCCAGCAGCTAGATTGGAACAAACGTTTCAACATAATTGAAGGAATTGCTCAAGGTTTGGTTTACTTGCACAACTATTCCAGAATGAGAGTAATTCATAGAGATTTAAAAGCAAGTAATGTTCTGCTTGATGAAAGGATGAATCCCAAAATTTCCGACTTTGGAATGGCAAGGATTTTCATGAATGATGAACAAGAAGCAAATACTATGAAGATTGTTGGGACCCGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

605

Amino Acids

67.57

Weight (kDa)

5.63

Isoelectric Point (pI)

30.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 179 3.1e-24 D-mannose binding lectin
Pkinase PF00069 440 - 604 4.8e-33 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 442 - 597 4.4e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 194, 1119, 1362
AarI CACCTGC 1 cut(s) 1316
Acc36I ACCTGC 1 cut(s) 1316
AccI GTMKAC 1 cut(s) 1158
AccII CGCG 1 cut(s) 156
AciI CCGC 4 cut(s) 613, 945, 1302, 1344
AclI AACGTT 1 cut(s) 1612
AclWI GGATC 1 cut(s) 430
AcoI YGGCCR 1 cut(s) 511
AcsI RAATTY 7 cut(s) 103, 148, 391, 1094, 1210, 1428, 1737
AcuI CTGAAG 1 cut(s) 870
AfaI GTAC 2 cut(s) 254, 1541
AfiI CCNNNNNNNGG 3 cut(s) 780, 837, 868
AhdI GACNNNNNGTC 1 cut(s) 1068
AjnI CCWGG 5 cut(s) 88, 460, 478, 559, 1188
AjuI GAANNNNNNNTTGG 2 cut(s) 1332, 1364
AleI CACNNNNGTG 1 cut(s) 529
Alw21I GWGCWC 3 cut(s) 268, 330, 416
Alw26I GTCTC 2 cut(s) 341, 989
AlwI GGATC 1 cut(s) 430
AoxI GGCC 1 cut(s) 511
ApeKI GCWGC 7 cut(s) 56, 400, 554, 766, 1007, 1164, 1594
ApoI RAATTY 7 cut(s) 103, 148, 391, 1094, 1210, 1428, 1737
AspLEI GCGC 3 cut(s) 11, 158, 559
AspS9I GGNCC 5 cut(s) 563, 583, 1352, 1561, 1809
AsuC2I CCSGG 1 cut(s) 1813
AsuHPI GGTGA 4 cut(s) 104, 371, 1387, 1526
AsuNHI GCTAGC 1 cut(s) 941
AvaII GGWCC 5 cut(s) 563, 583, 1352, 1561, 1809
BanII GRGCYC 2 cut(s) 268, 416
Bbv12I GWGCWC 3 cut(s) 268, 330, 416
BbvI GCAGC 7 cut(s) 43, 387, 566, 753, 994, 1176, 1606
BccI CCATC 7 cut(s) 305, 380, 413, 427, 584, 647, 1244
BceAI ACGGC 1 cut(s) 498
BciT130I CCWGG 5 cut(s) 90, 462, 480, 561, 1190
BcnI CCSGG 1 cut(s) 1813
BcoDI GTCTC 2 cut(s) 341, 989
BfaI CTAG 6 cut(s) 894, 942, 1233, 1334, 1584, 1598
BfoI RGCGCY 2 cut(s) 12, 560
BfuAI ACCTGC 1 cut(s) 1316
Bme1390I CCNGG 6 cut(s) 90, 462, 480, 561, 1190, 1813
Bme18I GGWCC 5 cut(s) 563, 583, 1352, 1561, 1809
BmeRI GACNNNNNGTC 1 cut(s) 1068
BmgT120I GGNCC 5 cut(s) 563, 583, 1352, 1561, 1809
BmiI GGNNCC 4 cut(s) 584, 585, 1810, 1811
BmrFI CCNGG 6 cut(s) 90, 462, 480, 561, 1190, 1813
BmsI GCATC 5 cut(s) 251, 307, 352, 848, 1577
BmtI GCTAGC 1 cut(s) 945
BpmI CTGGAG 3 cut(s) 282, 483, 1454
BpuEI CTTGAG 1 cut(s) 1623
BpuMI CCSGG 1 cut(s) 1813
BsaWI WCCGGW 1 cut(s) 1379
BsaXI ACNNNNNCTCC 4 cut(s) 668, 698, 1452, 1482
Bsc4I CCNNNNNNNGG 3 cut(s) 780, 837, 868
Bse1I ACTGG 2 cut(s) 1069, 1087
Bse3DI GCAATG 1 cut(s) 1098
BseBI CCWGG 5 cut(s) 90, 462, 480, 561, 1190
BseGI GGATG 7 cut(s) 242, 322, 388, 863, 1073, 1530, 1731
BseLI CCNNNNNNNGG 3 cut(s) 780, 837, 868
BseMI GCAATG 1 cut(s) 1098
BseMII CTCAG 2 cut(s) 534, 1000
BseNI ACTGG 2 cut(s) 1069, 1087
BseXI GCAGC 7 cut(s) 43, 387, 566, 753, 994, 1176, 1606
BsgI GTGCAG 1 cut(s) 573
Bsh1236I CGCG 1 cut(s) 156
BshFI GGCC 1 cut(s) 513
BsiHKAI GWGCWC 3 cut(s) 268, 330, 416
BsiSI CCGG 2 cut(s) 1380, 1813
BslFI GGGAC 2 cut(s) 596, 1275
BslI CCNNNNNNNGG 3 cut(s) 780, 837, 868
BsmAI GTCTC 2 cut(s) 341, 989
BsmFI GGGAC 2 cut(s) 596, 1275
BsmI GAATGC 1 cut(s) 1506
BsnI GGCC 1 cut(s) 513
Bsp1286I GDGCHC 3 cut(s) 268, 330, 416
Bsp143I GATC 1 cut(s) 422
BspACI CCGC 4 cut(s) 613, 945, 1302, 1344
BspANI GGCC 1 cut(s) 513
BspCNI CTCAG 2 cut(s) 535, 999
BspFNI CGCG 1 cut(s) 156
BspHI TCATGA 2 cut(s) 160, 1767
BspLI GGNNCC 4 cut(s) 584, 585, 1810, 1811
BspMI ACCTGC 1 cut(s) 1316
BspOI GCTAGC 1 cut(s) 945
BspPI GGATC 1 cut(s) 430
BspQI GCTCTTC 1 cut(s) 1499
BsrDI GCAATG 1 cut(s) 1098
BsrI ACTGG 2 cut(s) 1069, 1087
BssMI GATC 1 cut(s) 422
Bst2UI CCWGG 5 cut(s) 90, 462, 480, 561, 1190
Bst4CI ACNGT 4 cut(s) 503, 528, 1001, 1031
Bst6I CTCTTC 4 cut(s) 674, 1394, 1499, 1512
BstC8I GCNNGC 3 cut(s) 7, 943, 1592
BstDEI CTNAG 3 cut(s) 187, 543, 986
BstEII GGTNACC 1 cut(s) 1375
BstF5I GGATG 7 cut(s) 242, 322, 388, 863, 1073, 1530, 1731
BstFNI CGCG 1 cut(s) 156
BstH2I RGCGCY 2 cut(s) 12, 560
BstHHI GCGC 3 cut(s) 11, 158, 559
BstKTI GATC 1 cut(s) 425
BstMAI GTCTC 2 cut(s) 341, 989
BstMBI GATC 1 cut(s) 422
BstMWI GCNNNNNNNGC 2 cut(s) 227, 1016
BstNI CCWGG 5 cut(s) 90, 462, 480, 561, 1190
BstPI GGTNACC 1 cut(s) 1375
BstSCI CCNGG 6 cut(s) 88, 460, 478, 559, 1188, 1811
BstUI CGCG 1 cut(s) 156
BstV1I GCAGC 7 cut(s) 43, 387, 566, 753, 994, 1176, 1606
BsuRI GGCC 1 cut(s) 513
BtsCI GGATG 7 cut(s) 242, 322, 388, 863, 1073, 1530, 1731
BtsI GCAGTG 2 cut(s) 1174, 1401
BtsIMutI CAGTG 5 cut(s) 361, 524, 846, 1174, 1401
BveI ACCTGC 1 cut(s) 1316
Cac8I GCNNGC 3 cut(s) 7, 943, 1592
CciI TCATGA 2 cut(s) 160, 1767
CfoI GCGC 3 cut(s) 11, 158, 559
Cfr13I GGNCC 5 cut(s) 563, 583, 1352, 1561, 1809
CseI GACGC 1 cut(s) 1278
CsiI ACCWGGT 1 cut(s) 88
Csp6I GTAC 2 cut(s) 253, 1540
CviAII CATG 7 cut(s) 161, 1204, 1265, 1463, 1511, 1543, 1768
CviQI GTAC 2 cut(s) 253, 1540
DdeI CTNAG 3 cut(s) 187, 543, 986
DpnI GATC 1 cut(s) 424
DpnII GATC 1 cut(s) 422
DraI TTTAAA 1 cut(s) 1695
DriI GACNNNNNGTC 1 cut(s) 1068
EaeI YGGCCR 1 cut(s) 511
Eam1104I CTCTTC 4 cut(s) 674, 1394, 1499, 1512
Eam1105I GACNNNNNGTC 1 cut(s) 1068
EarI CTCTTC 4 cut(s) 674, 1394, 1499, 1512
Ecl136II GAGCTC 2 cut(s) 266, 414
Eco24I GRGCYC 2 cut(s) 268, 416
Eco47I GGWCC 5 cut(s) 563, 583, 1352, 1561, 1809
Eco53kI GAGCTC 2 cut(s) 266, 414
Eco57I CTGAAG 1 cut(s) 870
Eco91I GGTNACC 1 cut(s) 1375
EcoICRI GAGCTC 2 cut(s) 266, 414
EcoO109I RGGNCCY 3 cut(s) 563, 583, 1809
EcoO65I GGTNACC 1 cut(s) 1375
EcoRI GAATTC 1 cut(s) 1210
EcoRII CCWGG 5 cut(s) 88, 460, 478, 559, 1188
EcoT38I GRGCYC 2 cut(s) 268, 416
FaeI CATG 7 cut(s) 164, 1207, 1268, 1466, 1514, 1546, 1771
FaqI GGGAC 2 cut(s) 596, 1275
FatI CATG 7 cut(s) 160, 1203, 1264, 1462, 1510, 1542, 1767
FblI GTMKAC 1 cut(s) 1158
FokI GGATG 7 cut(s) 229, 329, 395, 870, 1080, 1537, 1738
FriOI GRGCYC 2 cut(s) 268, 416
FspBI CTAG 6 cut(s) 894, 942, 1233, 1334, 1584, 1598
GlaI GCGC 3 cut(s) 10, 157, 558
GsuI CTGGAG 3 cut(s) 282, 483, 1454
HaeII RGCGCY 2 cut(s) 12, 560
HaeIII GGCC 1 cut(s) 513
HapII CCGG 2 cut(s) 1380, 1813
HgaI GACGC 1 cut(s) 1278
HhaI GCGC 3 cut(s) 11, 158, 559
Hin1II CATG 7 cut(s) 164, 1207, 1268, 1466, 1514, 1546, 1771
Hin6I GCGC 3 cut(s) 9, 156, 557
HinP1I GCGC 3 cut(s) 9, 156, 557
HincII GTYRAC 2 cut(s) 499, 1159
HindII GTYRAC 2 cut(s) 499, 1159
HindIII AAGCTT 2 cut(s) 112, 1555
HinfI GANTC 9 cut(s) 208, 341, 712, 803, 827, 971, 1038, 1577, 1729
HpaI GTTAAC 1 cut(s) 499
HpaII CCGG 2 cut(s) 1380, 1813
HphI GGTGA 4 cut(s) 104, 371, 1387, 1526
Hpy166II GTNNAC 6 cut(s) 141, 499, 540, 1159, 1238, 1651
Hpy188I TCNGA 9 cut(s) 84, 346, 418, 760, 1062, 1321, 1435, 1499, 1744
Hpy188III TCNNGA 8 cut(s) 161, 261, 575, 650, 716, 1419, 1668, 1768
Hpy8I GTNNAC 6 cut(s) 141, 499, 540, 1159, 1238, 1651
HpyAV CCTTC 5 cut(s) 267, 289, 845, 1334, 1622
HpyCH4III ACNGT 4 cut(s) 503, 528, 1001, 1031
HpyCH4IV ACGT 2 cut(s) 197, 1612
HpyF10VI GCNNNNNNNGC 2 cut(s) 227, 1016
HpyF3I CTNAG 3 cut(s) 187, 543, 986
HpySE526I ACGT 2 cut(s) 197, 1612
Hsp92II CATG 7 cut(s) 164, 1207, 1268, 1466, 1514, 1546, 1771
HspAI GCGC 3 cut(s) 9, 156, 557
KflI GGGWCCC 2 cut(s) 583, 1809
KspAI GTTAAC 1 cut(s) 499
Kzo9I GATC 1 cut(s) 422
LguI GCTCTTC 1 cut(s) 1499
LmnI GCTCC 2 cut(s) 42, 263
Lsp1109I GCAGC 7 cut(s) 43, 387, 566, 753, 994, 1176, 1606
LweI GCATC 5 cut(s) 251, 307, 352, 848, 1577
MabI ACCWGGT 1 cut(s) 88
MaeI CTAG 6 cut(s) 894, 942, 1233, 1334, 1584, 1598
MaeII ACGT 2 cut(s) 197, 1612
MaeIII GTNAC 7 cut(s) 298, 522, 728, 920, 995, 1025, 1375
MalI GATC 1 cut(s) 424
MboI GATC 1 cut(s) 422
MboII GAAGA 8 cut(s) 99, 442, 691, 721, 1411, 1486, 1529, 1810
MfeI CAATTG 1 cut(s) 807
MhlI GDGCHC 3 cut(s) 268, 330, 416
MlyI GAGTC 1 cut(s) 217
MmeI TCCRAC 2 cut(s) 956, 1767
MnlI CCTC 4 cut(s) 675, 1052, 1395, 1515
MslI CAYNNNNRTG 3 cut(s) 216, 309, 529
MspI CCGG 2 cut(s) 1380, 1813
MspR9I CCNGG 6 cut(s) 90, 462, 480, 561, 1190, 1813
MunI CAATTG 1 cut(s) 807
Mva1269I GAATGC 1 cut(s) 1506
MvaI CCWGG 5 cut(s) 90, 462, 480, 561, 1190
MvnI CGCG 1 cut(s) 156
MwoI GCNNNNNNNGC 2 cut(s) 227, 1016
NciI CCSGG 1 cut(s) 1813
NdeII GATC 1 cut(s) 422
NheI GCTAGC 1 cut(s) 941
NlaIII CATG 7 cut(s) 164, 1207, 1268, 1466, 1514, 1546, 1771
NlaIV GGNNCC 4 cut(s) 584, 585, 1810, 1811
NmuCI GTSAC 3 cut(s) 522, 995, 1375
OliI CACNNNNGTG 1 cut(s) 529
PagI TCATGA 2 cut(s) 160, 1767
PaqCI CACCTGC 1 cut(s) 1316
PciSI GCTCTTC 1 cut(s) 1499
PctI GAATGC 1 cut(s) 1506
PfeI GAWTC 8 cut(s) 341, 712, 803, 827, 971, 1038, 1577, 1729
PfoI TCCNGGA 2 cut(s) 460, 1188
PleI GAGTC 1 cut(s) 216
PpsI GAGTC 1 cut(s) 216
PpuMI RGGWCCY 3 cut(s) 563, 583, 1809
PsiI TTATAA 3 cut(s) 194, 1119, 1362
Psp124BI GAGCTC 2 cut(s) 268, 416
Psp1406I AACGTT 1 cut(s) 1612
Psp5II RGGWCCY 3 cut(s) 563, 583, 1809
Psp6I CCWGG 5 cut(s) 88, 460, 478, 559, 1188
PspEI GGTNACC 1 cut(s) 1375
PspGI CCWGG 5 cut(s) 88, 460, 478, 559, 1188
PspN4I GGNNCC 4 cut(s) 584, 585, 1810, 1811
PspPI GGNCC 5 cut(s) 563, 583, 1352, 1561, 1809
PspPPI RGGWCCY 3 cut(s) 563, 583, 1809
RsaI GTAC 2 cut(s) 254, 1541
RsaNI GTAC 2 cut(s) 253, 1540
RseI CAYNNNNRTG 3 cut(s) 216, 309, 529
SacI GAGCTC 2 cut(s) 268, 416
SalI GTCGAC 1 cut(s) 1157
SapI GCTCTTC 1 cut(s) 1499
Sau3AI GATC 1 cut(s) 422
Sau96I GGNCC 5 cut(s) 563, 583, 1352, 1561, 1809
SchI GAGTC 1 cut(s) 217
ScrFI CCNGG 6 cut(s) 90, 462, 480, 561, 1190, 1813
SduI GDGCHC 3 cut(s) 268, 330, 416
SexAI ACCWGGT 1 cut(s) 88
SfaNI GCATC 5 cut(s) 251, 307, 352, 848, 1577
SinI GGWCC 5 cut(s) 563, 583, 1352, 1561, 1809
SmiMI CAYNNNNRTG 3 cut(s) 216, 309, 529
SmlI CTYRAG 1 cut(s) 1638
SmoI CTYRAG 1 cut(s) 1638
SsiI CCGC 4 cut(s) 613, 945, 1302, 1344
SspI AATATT 1 cut(s) 670
SspMI CTAG 6 cut(s) 894, 942, 1233, 1334, 1584, 1598
SstI GAGCTC 2 cut(s) 268, 416
StyD4I CCNGG 6 cut(s) 88, 460, 478, 559, 1188, 1811
TaaI ACNGT 4 cut(s) 503, 528, 1001, 1031
TaiI ACGT 2 cut(s) 200, 1615
TaqI TCGA 3 cut(s) 15, 649, 1158
TatI WGTACW 1 cut(s) 1539
TauI GCSGC 3 cut(s) 616, 948, 1304
TfiI GAWTC 8 cut(s) 341, 712, 803, 827, 971, 1038, 1577, 1729
TscAI CASTG 5 cut(s) 361, 531, 853, 1174, 1401
TseFI GTSAC 3 cut(s) 522, 995, 1375
TseI GCWGC 7 cut(s) 56, 400, 554, 766, 1007, 1164, 1594
Tsp45I GTSAC 3 cut(s) 522, 995, 1375
TspRI CASTG 5 cut(s) 361, 531, 853, 1174, 1401
VpaK11BI GGWCC 5 cut(s) 563, 583, 1352, 1561, 1809
XapI RAATTY 7 cut(s) 103, 148, 391, 1094, 1210, 1428, 1737
XmiI GTMKAC 1 cut(s) 1158
XspI CTAG 6 cut(s) 894, 942, 1233, 1334, 1584, 1598
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.