Rmu_sc0004107.1_g000017

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004107.1
OG0000096
Physical Location & Seq
Forward (+)
76254 .. 79603
3350 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004107.1_g000017.1.cds

Sequence Viewer

Length: 2121 bp
atgatcaacttattgtgcttgctcatcagtttctcaatcttctggacgtgccatggtgcagcattgttcattggggatacacttaaaccaggggaggctctcaattcctcgagctttttggcctctgcttcgggggagtttaccttgggtttcaactccagctacctcactctgaggtccaaggactatacggtttggattgccaacctgtacgcaccgatttcagacacttcgtcggcgcttcttaccttggataagaccacaactgtcctgcaaattacgtttaaaggcgggaatccaattgtgctttacacctctccagaaaatagcaccaatgttgtggctaccctgtcagattctggcatcctagtcctgcaagaggtggatcaggatgtttcaaactctcctaaacaagaatcgccattgataagggtgttgtggcaaagctttgatcatcctactgtggcccttatgccgaagatgaaaataggtgttgataatagaaatggcaacaattggtcactgtcatcttggcgggaaagtcagatcagccctgggccaggttctttcacccttgattgggatttcaatacacgccagttggaagttaggaaaagcggggaggtttgctggactagcggggaattcagatctggaagatttttgtacatcaatatcactgaggcatccaaggtcagttacaattttagcatggtttcgaatgagaaagaagactacttcagttacactgctgttggtgatcaaaatgttgcatcagtctgggtgctagacacaggtggggagctttatgatgttaattataacatttctattgcgcgagcaggtgactgtgatggctataacaccctaggagggtgccacggatggcgcgctcggagaactaatgatggactgcataagaggatctggattggtatagcaattgcggctgttcttctggcactggtgctttgcagcatgtgctacctaatacaaagaagaaaacttgcaggtgagaaccaagcaaagatccaggatatgctgaacataatgaaatctaatagacctactggtgctaatgggcttcaaaatgatggaaagggggcccgtgatttaagcgtatttagttatgcatctattgtagctgccacttgcaacttctctaatgaaaataagctcggagaagggggttttggacctgtttataaggggaaattggtgtctggacaagaagtagcagtgaagaggctttcaaaacgttcagggcagggaatatctgagtttaagaatgaattgatactcatatatgaactccagcatacaaaccttgttcagctgtttggattttgcattcatggtgaagagagggtgttgatatacgagtacttgccaaacaatagcttggactactttttatttgattcaaccagatgtcagcaactagattggaacaaacgtttcagcataattgaaggaattgctcaaggtttgctttacttgcataaatattccagaatgagagtagttcatagagatttaaaagcaagtaatgttctacttgatgaaagaatgaaccccaaaatttctgattttggaatggcaaggattttcacgaatgatgaacaagaagcaaatacttgcaagattgttgggacacgtggttacatgtcccccgagtatgttatgggggggaacttttctataaaatctgatgtatatagtttcggagtgttgatgctagaaattctaagtggaaggaaaaacaacagcttctacaatgatgatcacgccctcaatatagttggctatgcatgggcattatggagagaaggtgctggactaggactaatggatccaacacttggcgattcatgtcataaagatcaattgttgaggtgcatccatgttggtctgctctgcgtggaggaaaatgcagccaatcgacccacaatgttagatgtgatatctatgctggctaatgaaagcatatcactaatagtacctacaaaaccagcattctgtacagaaagaaatgtgatcataactgctgtaggtgggaatggacaagaaattattgcatctataaatggtgtcaccaattctggttttgatgggcgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr

Protein Analysis

706

Amino Acids

78.19

Weight (kDa)

5.96

Isoelectric Point (pI)

35.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 822, 1206
AarI CACCTGC 2 cut(s) 833, 1001
Acc36I ACCTGC 2 cut(s) 833, 1001
AccB1I GGYRCC 1 cut(s) 876
AccB7I CCANNNNNTGG 1 cut(s) 1862
AccII CGCG 2 cut(s) 838, 891
AciI CCGC 5 cut(s) 291, 535, 618, 639, 947
AclI AACGTT 2 cut(s) 1258, 1456
AclWI GGATC 5 cut(s) 393, 932, 1024, 1847, 1860
AcsI RAATTY 3 cut(s) 644, 1581, 1743
AcuI CTGAAG 1 cut(s) 724
AcvI CACGTG 1 cut(s) 1658
AfaI GTAC 5 cut(s) 212, 668, 1385, 2001, 2023
AfiI CCNNNNNNNGG 6 cut(s) 379, 560, 579, 580, 873, 1862
AflIII ACRYGT 2 cut(s) 1655, 1665
AgsI TTSAA 7 cut(s) 154, 399, 589, 1088, 1254, 1425, 1472
AhdI GACNNNNNGTC 1 cut(s) 232
AjiI CACGTC 1 cut(s) 48
AjnI CCWGG 4 cut(s) 88, 553, 559, 1032
AjuI GAANNNNNNNTTGG 2 cut(s) 1176, 1208
AluBI AGCT 9 cut(s) 114, 162, 447, 805, 1145, 1177, 1336, 1401, 1770
AluI AGCT 9 cut(s) 114, 162, 447, 805, 1145, 1177, 1336, 1401, 1770
AlwI GGATC 5 cut(s) 393, 932, 1024, 1847, 1860
AlwNI CAGNNNCTG 1 cut(s) 359
Ama87I CYCGRG 2 cut(s) 109, 1673
AoxI GGCC 4 cut(s) 120, 465, 557, 1104
ApaI GGGCCC 1 cut(s) 1108
ApeKI GCWGC 4 cut(s) 59, 975, 1145, 1934
ApoI RAATTY 3 cut(s) 644, 1581, 1743
AspA2I CCTAGG 1 cut(s) 868
AspLEI GCGC 4 cut(s) 241, 838, 891, 893
AspS9I GGNCC 6 cut(s) 177, 466, 557, 1104, 1105, 1196
AsuHPI GGTGA 6 cut(s) 562, 770, 857, 1025, 1370, 2086
AsuII TTCGAA 1 cut(s) 719
AvaI CYCGRG 2 cut(s) 109, 1673
AvaII GGWCC 2 cut(s) 177, 1196
AvrII CCTAGG 1 cut(s) 868
BaeGI GKGCMC 1 cut(s) 1108
BamHI GGATCC 1 cut(s) 1852
BanI GGYRCC 1 cut(s) 876
BanII GRGCYC 1 cut(s) 1108
BbrPI CACGTG 1 cut(s) 1658
BbsI GAAGAC 1 cut(s) 738
BbvI GCAGC 4 cut(s) 71, 987, 1132, 1946
BccI CCATC 5 cut(s) 848, 879, 902, 1088, 2105
BciT130I CCWGG 4 cut(s) 90, 555, 561, 1034
BciVI GTATCC 1 cut(s) 70
BclI TGATCA 5 cut(s) 3, 451, 760, 1783, 2037
BfaI CTAG 7 cut(s) 368, 636, 788, 869, 1442, 1739, 1841
BfmI CTRYAG 1 cut(s) 2049
BfoI RGCGCY 1 cut(s) 242
BfuAI ACCTGC 2 cut(s) 833, 1001
BfuI GTATCC 1 cut(s) 70
BglII AGATCT 1 cut(s) 650
BisI GCNGC 5 cut(s) 60, 948, 976, 1146, 1935
BlnI CCTAGG 1 cut(s) 868
BlsI GCNGC 5 cut(s) 61, 949, 977, 1147, 1936
BmcAI AGTACT 1 cut(s) 1385
Bme1390I CCNGG 4 cut(s) 90, 555, 561, 1034
Bme18I GGWCC 2 cut(s) 177, 1196
BmeRI GACNNNNNGTC 1 cut(s) 232
BmeT110I CYCGRG 2 cut(s) 109, 1673
BmgBI CACGTC 1 cut(s) 48
BmgT120I GGNCC 6 cut(s) 177, 466, 557, 1104, 1105, 1196
BmiI GGNNCC 4 cut(s) 878, 1105, 1106, 1854
BmrFI CCNGG 4 cut(s) 90, 555, 561, 1034
BmsI GCATC 7 cut(s) 372, 695, 782, 1142, 1725, 1908, 2087
BpiI GAAGAC 1 cut(s) 738
BpmI CTGGAG 3 cut(s) 142, 303, 1298
Bpu14I TTCGAA 1 cut(s) 719
BpuEI CTTGAG 1 cut(s) 1467
BsaAI YACGTR 1 cut(s) 1658
BsaXI ACNNNNNCTCC 2 cut(s) 1816, 1846
Bsc4I CCNNNNNNNGG 6 cut(s) 379, 560, 579, 580, 873, 1862
Bse1I ACTGG 3 cut(s) 598, 969, 1075
BseBI CCWGG 4 cut(s) 90, 555, 561, 1034
BseGI GGATG 6 cut(s) 363, 397, 454, 686, 890, 1899
BseLI CCNNNNNNNGG 6 cut(s) 379, 560, 579, 580, 873, 1862
BseMII CTCAG 3 cut(s) 164, 672, 1269
BseNI ACTGG 3 cut(s) 598, 969, 1075
BsePI GCGCGC 1 cut(s) 889
BseSI GKGCMC 1 cut(s) 1108
BseXI GCAGC 4 cut(s) 71, 987, 1132, 1946
BsgI GTGCAG 1 cut(s) 78
Bsh1236I CGCG 2 cut(s) 838, 891
BshFI GGCC 4 cut(s) 122, 467, 559, 1106
BshNI GGYRCC 1 cut(s) 876
BsiHKCI CYCGRG 2 cut(s) 109, 1673
BslFI GGGAC 2 cut(s) 1654, 1666
BslI CCNNNNNNNGG 6 cut(s) 379, 560, 579, 580, 873, 1862
BsmFI GGGAC 2 cut(s) 1654, 1666
BsmI GAATGC 2 cut(s) 1350, 2015
BsnI GGCC 4 cut(s) 122, 467, 559, 1106
BsoBI CYCGRG 2 cut(s) 109, 1673
Bsp119I TTCGAA 1 cut(s) 719
Bsp120I GGGCCC 1 cut(s) 1104
Bsp1286I GDGCHC 1 cut(s) 1108
Bsp1407I TGTACA 2 cut(s) 666, 2021
Bsp19I CCATGG 1 cut(s) 52
BspACI CCGC 5 cut(s) 291, 535, 618, 639, 947
BspANI GGCC 4 cut(s) 122, 467, 559, 1106
BspCNI CTCAG 3 cut(s) 165, 673, 1270
BspFNI CGCG 2 cut(s) 838, 891
BspLI GGNNCC 4 cut(s) 878, 1105, 1106, 1854
BspMI ACCTGC 2 cut(s) 833, 1001
BspPI GGATC 5 cut(s) 393, 932, 1024, 1847, 1860
BspT104I TTCGAA 1 cut(s) 719
BspT107I GGYRCC 1 cut(s) 876
BsrGI TGTACA 2 cut(s) 666, 2021
BsrI ACTGG 3 cut(s) 598, 969, 1075
BssHII GCGCGC 1 cut(s) 889
BssT1I CCWWGG 6 cut(s) 52, 144, 180, 249, 690, 868
Bst2UI CCWGG 4 cut(s) 90, 555, 561, 1034
Bst4CI ACNGT 5 cut(s) 193, 268, 463, 525, 851
Bst6I CTCTTC 2 cut(s) 1238, 1356
BstAPI GCANNNNNTGC 1 cut(s) 981
BstAUI TGTACA 2 cut(s) 666, 2021
BstBAI YACGTR 1 cut(s) 1658
BstBI TTCGAA 1 cut(s) 719
BstC8I GCNNGC 4 cut(s) 20, 840, 891, 1974
BstDEI CTNAG 4 cut(s) 173, 681, 1278, 1748
BstDSI CCRYGG 2 cut(s) 52, 880
BstENI CCTNNNNNAGG 2 cut(s) 377, 558
BstF5I GGATG 6 cut(s) 363, 397, 454, 686, 890, 1899
BstFNI CGCG 2 cut(s) 838, 891
BstH2I RGCGCY 1 cut(s) 242
BstHHI GCGC 4 cut(s) 241, 838, 891, 893
BstMWI GCNNNNNNNGC 4 cut(s) 636, 947, 981, 1498
BstNI CCWGG 4 cut(s) 90, 555, 561, 1034
BstNSI RCATGY 2 cut(s) 982, 1669
BstSCI CCNGG 4 cut(s) 88, 553, 559, 1032
BstSFI CTRYAG 1 cut(s) 2049
BstSLI GKGCMC 1 cut(s) 1108
BstUI CGCG 2 cut(s) 838, 891
BstV1I GCAGC 4 cut(s) 71, 987, 1132, 1946
BstV2I GAAGAC 1 cut(s) 738
BstX2I RGATCY 4 cut(s) 650, 924, 1029, 1852
BstXI CCANNNNNNTGG 1 cut(s) 340
BstYI RGATCY 4 cut(s) 650, 924, 1029, 1852
BsuI GTATCC 1 cut(s) 70
BsuRI GGCC 4 cut(s) 122, 467, 559, 1106
BtgI CCRYGG 2 cut(s) 52, 880
BtrI CACGTC 1 cut(s) 48
BtsCI GGATG 6 cut(s) 363, 397, 454, 686, 890, 1899
BtsI GCAGTG 2 cut(s) 747, 1245
BtsIMutI CAGTG 5 cut(s) 521, 678, 747, 962, 1245
BveI ACCTGC 2 cut(s) 833, 1001
Cac8I GCNNGC 4 cut(s) 20, 840, 891, 1974
CaiI CAGNNNCTG 1 cut(s) 359
CfoI GCGC 4 cut(s) 241, 838, 891, 893
Cfr13I GGNCC 6 cut(s) 177, 466, 557, 1104, 1105, 1196
Csp6I GTAC 5 cut(s) 211, 667, 1384, 2000, 2022
CviAII CATG 8 cut(s) 53, 712, 979, 1355, 1666, 1812, 1872, 1904
CviQI GTAC 5 cut(s) 211, 667, 1384, 2000, 2022
DdeI CTNAG 4 cut(s) 173, 681, 1278, 1748
DraI TTTAAA 2 cut(s) 286, 1539
DriI GACNNNNNGTC 1 cut(s) 232
Eam1104I CTCTTC 2 cut(s) 1238, 1356
Eam1105I GACNNNNNGTC 1 cut(s) 232
EarI CTCTTC 2 cut(s) 1238, 1356
Eco130I CCWWGG 6 cut(s) 52, 144, 180, 249, 690, 868
Eco24I GRGCYC 1 cut(s) 1108
Eco32I GATATC 1 cut(s) 1965
Eco47I GGWCC 2 cut(s) 177, 1196
Eco57I CTGAAG 1 cut(s) 724
Eco72I CACGTG 1 cut(s) 1658
Eco88I CYCGRG 2 cut(s) 109, 1673
EcoNI CCTNNNNNAGG 2 cut(s) 377, 558
EcoO109I RGGNCCY 1 cut(s) 1104
EcoRI GAATTC 1 cut(s) 644
EcoRII CCWGG 4 cut(s) 88, 553, 559, 1032
EcoRV GATATC 1 cut(s) 1965
EcoT14I CCWWGG 6 cut(s) 52, 144, 180, 249, 690, 868
EcoT22I ATGCAT 2 cut(s) 1135, 1813
EcoT38I GRGCYC 1 cut(s) 1108
ErhI CCWWGG 6 cut(s) 52, 144, 180, 249, 690, 868
FaeI CATG 8 cut(s) 56, 715, 982, 1358, 1669, 1815, 1875, 1907
FalI AAGNNNNNCTT 2 cut(s) 1476, 1508
FaqI GGGAC 2 cut(s) 1654, 1666
FatI CATG 8 cut(s) 52, 711, 978, 1354, 1665, 1811, 1871, 1903
FauI CCCGC 4 cut(s) 284, 528, 611, 632
FbaI TGATCA 5 cut(s) 3, 451, 760, 1783, 2037
Fnu4HI GCNGC 5 cut(s) 60, 948, 976, 1146, 1935
FokI GGATG 6 cut(s) 350, 404, 441, 673, 897, 1886
FriOI GRGCYC 1 cut(s) 1108
Fsp4HI GCNGC 5 cut(s) 60, 948, 976, 1146, 1935
FspBI CTAG 7 cut(s) 368, 636, 788, 869, 1442, 1739, 1841
GlaI GCGC 4 cut(s) 240, 837, 890, 892
GluI GCNGC 5 cut(s) 60, 948, 976, 1146, 1935
GsuI CTGGAG 3 cut(s) 142, 303, 1298
HaeII RGCGCY 1 cut(s) 242
HaeIII GGCC 4 cut(s) 122, 467, 559, 1106
HhaI GCGC 4 cut(s) 241, 838, 891, 893
Hin1II CATG 8 cut(s) 56, 715, 982, 1358, 1669, 1815, 1875, 1907
Hin6I GCGC 4 cut(s) 239, 836, 889, 891
HinP1I GCGC 4 cut(s) 239, 836, 889, 891
HindIII AAGCTT 1 cut(s) 445
HinfI GANTC 5 cut(s) 295, 356, 416, 1421, 1868
HphI GGTGA 6 cut(s) 562, 770, 857, 1025, 1370, 2086
Hpy166II GTNNAC 1 cut(s) 141
Hpy188III TCNNGA 8 cut(s) 43, 320, 389, 654, 928, 1224, 1512, 1612
Hpy8I GTNNAC 1 cut(s) 141
Hpy99I CGWCG 1 cut(s) 238
HpyAV CCTTC 4 cut(s) 1178, 1466, 1749, 1823
HpyCH4III ACNGT 5 cut(s) 193, 268, 463, 525, 851
HpyCH4IV ACGT 5 cut(s) 47, 281, 1258, 1456, 1657
HpyF10VI GCNNNNNNNGC 4 cut(s) 636, 947, 981, 1498
HpyF3I CTNAG 4 cut(s) 173, 681, 1278, 1748
HpySE526I ACGT 5 cut(s) 47, 281, 1258, 1456, 1657
Hsp92II CATG 8 cut(s) 56, 715, 982, 1358, 1669, 1815, 1875, 1907
HspAI GCGC 4 cut(s) 239, 836, 889, 891
Ksp22I TGATCA 5 cut(s) 3, 451, 760, 1783, 2037
LmnI GCTCC 1 cut(s) 802
Lsp1109I GCAGC 4 cut(s) 71, 987, 1132, 1946
LweI GCATC 7 cut(s) 372, 695, 782, 1142, 1725, 1908, 2087
MaeI CTAG 7 cut(s) 368, 636, 788, 869, 1442, 1739, 1841
MaeII ACGT 5 cut(s) 47, 281, 1258, 1456, 1657
MaeIII GTNAC 6 cut(s) 519, 698, 743, 845, 1661, 2092
MboII GAAGA 8 cut(s) 31, 490, 669, 743, 947, 1011, 1255, 1373
MfeI CAATTG 4 cut(s) 300, 514, 942, 1886
MflI RGATCY 4 cut(s) 650, 924, 1029, 1852
MhlI GDGCHC 1 cut(s) 1108
MmeI TCCRAC 2 cut(s) 582, 1880
Mph1103I ATGCAT 2 cut(s) 1135, 1813
MseI TTAA 7 cut(s) 84, 285, 816, 1115, 1284, 1538, 2119
MspA1I CMGCKG 1 cut(s) 1336
MspR9I CCNGG 4 cut(s) 90, 555, 561, 1034
MunI CAATTG 4 cut(s) 300, 514, 942, 1886
Mva1269I GAATGC 2 cut(s) 1350, 2015
MvaI CCWGG 4 cut(s) 90, 555, 561, 1034
MvnI CGCG 2 cut(s) 838, 891
MwoI GCNNNNNNNGC 4 cut(s) 636, 947, 981, 1498
NcoI CCATGG 1 cut(s) 52
NlaIII CATG 8 cut(s) 56, 715, 982, 1358, 1669, 1815, 1875, 1907
NlaIV GGNNCC 4 cut(s) 878, 1105, 1106, 1854
NmuCI GTSAC 3 cut(s) 519, 845, 2092
NsiI ATGCAT 2 cut(s) 1135, 1813
NspI RCATGY 2 cut(s) 982, 1669
NspV TTCGAA 1 cut(s) 719
PaeR7I CTCGAG 1 cut(s) 109
PaqCI CACCTGC 2 cut(s) 833, 1001
PasI CCCWGGG 1 cut(s) 554
PauI GCGCGC 1 cut(s) 889
PciI ACATGT 1 cut(s) 1665
PctI GAATGC 2 cut(s) 1350, 2015
PfeI GAWTC 5 cut(s) 295, 356, 416, 1421, 1868
PflMI CCANNNNNTGG 1 cut(s) 1862
PfoI TCCNGGA 1 cut(s) 1032
PkrI GCNGC 5 cut(s) 61, 949, 977, 1147, 1936
PmaCI CACGTG 1 cut(s) 1658
PmlI CACGTG 1 cut(s) 1658
Ppu21I YACGTR 1 cut(s) 1658
PscI ACATGT 1 cut(s) 1665
PsiI TTATAA 2 cut(s) 822, 1206
Psp1406I AACGTT 2 cut(s) 1258, 1456
Psp6I CCWGG 4 cut(s) 88, 553, 559, 1032
PspCI CACGTG 1 cut(s) 1658
PspGI CCWGG 4 cut(s) 88, 553, 559, 1032
PspN4I GGNNCC 4 cut(s) 878, 1105, 1106, 1854
PspOMI GGGCCC 1 cut(s) 1104
PspPI GGNCC 6 cut(s) 177, 466, 557, 1104, 1105, 1196
PspXI VCTCGAGB 1 cut(s) 109
PstNI CAGNNNCTG 1 cut(s) 359
PsuI RGATCY 4 cut(s) 650, 924, 1029, 1852
PteI GCGCGC 1 cut(s) 889
PvuII CAGCTG 1 cut(s) 1336
RsaI GTAC 5 cut(s) 212, 668, 1385, 2001, 2023
RsaNI GTAC 5 cut(s) 211, 667, 1384, 2000, 2022
SaqAI TTAA 7 cut(s) 84, 285, 816, 1115, 1284, 1538, 2119
SatI GCNGC 5 cut(s) 60, 948, 976, 1146, 1935
Sau96I GGNCC 6 cut(s) 177, 466, 557, 1104, 1105, 1196
ScaI AGTACT 1 cut(s) 1385
ScrFI CCNGG 4 cut(s) 90, 555, 561, 1034
SduI GDGCHC 1 cut(s) 1108
SfaNI GCATC 7 cut(s) 372, 695, 782, 1142, 1725, 1908, 2087
SfcI CTRYAG 1 cut(s) 2049
Sfr274I CTCGAG 1 cut(s) 109
SfuI TTCGAA 1 cut(s) 719
SinI GGWCC 2 cut(s) 177, 1196
SlaI CTCGAG 1 cut(s) 109
SmlI CTYRAG 2 cut(s) 109, 1482
SmoI CTYRAG 2 cut(s) 109, 1482
SsiI CCGC 5 cut(s) 291, 535, 618, 639, 947
SspI AATATT 1 cut(s) 1508
SspMI CTAG 7 cut(s) 368, 636, 788, 869, 1442, 1739, 1841
StyD4I CCNGG 4 cut(s) 88, 553, 559, 1032
StyI CCWWGG 6 cut(s) 52, 144, 180, 249, 690, 868
TaaI ACNGT 5 cut(s) 193, 268, 463, 525, 851
TaiI ACGT 5 cut(s) 50, 284, 1261, 1459, 1660
TaqI TCGA 3 cut(s) 110, 719, 1942
TatI WGTACW 3 cut(s) 666, 1383, 2021
TauI GCSGC 1 cut(s) 950
TfiI GAWTC 5 cut(s) 295, 356, 416, 1421, 1868
Tru1I TTAA 7 cut(s) 84, 285, 816, 1115, 1284, 1538, 2119
Tru9I TTAA 7 cut(s) 84, 285, 816, 1115, 1284, 1538, 2119
TscAI CASTG 5 cut(s) 528, 685, 754, 969, 1245
TseFI GTSAC 3 cut(s) 519, 845, 2092
TseI GCWGC 4 cut(s) 59, 975, 1145, 1934
Tsp45I GTSAC 3 cut(s) 519, 845, 2092
TspGWI ACGGA 1 cut(s) 897
TspRI CASTG 5 cut(s) 528, 685, 754, 969, 1245
Van91I CCANNNNNTGG 1 cut(s) 1862
VpaK11BI GGWCC 2 cut(s) 177, 1196
XagI CCTNNNNNAGG 2 cut(s) 377, 558
XapI RAATTY 3 cut(s) 644, 1581, 1743
XceI RCATGY 2 cut(s) 982, 1669
XhoI CTCGAG 1 cut(s) 109
XmaJI CCTAGG 1 cut(s) 868
XspI CTAG 7 cut(s) 368, 636, 788, 869, 1442, 1739, 1841
ZrmI AGTACT 1 cut(s) 1385
Zsp2I ATGCAT 2 cut(s) 1135, 1813
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.