MD10G1207800.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
30746591 .. 30747316
726 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1207800.v1.1.491

Sequence Viewer

Length: 726 bp
ATGGATGGATCGAGGAACCAGATTTTGTGGCAAAGTTTTGATCATCCAATAGACACCCTTTATCCAGGCATGAAATTAGGCGTGAACCATAGAAACGGGCACATTTTGTCACTTACTTCATGGTCAAGTGAGTACGATCCAAAGCCGGGGCCTTTCACCCTTGAATGGGACTACAAAACGCAAGAATTGCAGATTAAGCGACGCGGAGTGGTTCACTGGACTAGTGGAGCCTCTACAAGTAAGAGATTTAAGCTGCTGATGGGGTGGTATAATTTTAACATTGTTTCAAACAAAAATGAAGACTACTTCTCTCTAAACCAGACTTCTACATCACAATGGTTCTTAACAACAGCTGGAGTACTGGATGACTTGGAAGGAGATGTTATTGCAAGACCAGATAACTGTTATGGCTATAACAGAGATGGAGGGTGCAAGAGATGGGCGGAGAAGCCAACTTGCAGACATGTTGGTGACACATTCGAGATAAAAAATGGTTTCAACTCAAATTCAACCTTCCCGACTGATTCTAATAGAAGTCTAAGTCTTAGTGATTGTAAAGATTGTTGTTGGAAAAATTGCGACTGTTTTGGATTCAACTTTCTATTTGAATATTATACAGGAATAAACTGGGAGTTCATTACAGGCTTCTCTAGTGATACTACACTTTGTTTTTATATGTTGAAAACAAAGTCACCTCGCAATAATGGTAGATCTACCGATCATTAA

Protein Analysis

242

Amino Acids

27.81

Weight (kDa)

6.58

Isoelectric Point (pI)

40.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 4 - 41 5.3e-10 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 204
AciI CCGC 2 cut(s) 204, 443
AclWI GGATC 2 cut(s) 16, 131
AcsI RAATTY 1 cut(s) 505
AfaI GTAC 2 cut(s) 134, 360
AfiI CCNNNNNNNGG 3 cut(s) 146, 165, 166
AflIII ACRYGT 1 cut(s) 463
AgsI TTSAA 7 cut(s) 164, 288, 499, 510, 595, 608, 682
AhlI ACTAGT 1 cut(s) 221
AjnI CCWGG 1 cut(s) 64
AluBI AGCT 2 cut(s) 253, 353
AluI AGCT 2 cut(s) 253, 353
AlwI GGATC 2 cut(s) 16, 131
AoxI GGCC 1 cut(s) 149
ApeKI GCWGC 1 cut(s) 253
ApoI RAATTY 1 cut(s) 505
AspS9I GGNCC 1 cut(s) 149
AsuC2I CCSGG 1 cut(s) 147
AsuHPI GGTGA 3 cut(s) 148, 482, 684
BaeGI GKGCMC 1 cut(s) 102
BbsI GAAGAC 1 cut(s) 306
BbvI GCAGC 1 cut(s) 240
BccI CCATC 3 cut(s) 253, 416, 432
BciT130I CCWGG 1 cut(s) 66
BclI TGATCA 1 cut(s) 40
BcnI CCSGG 1 cut(s) 147
BcuI ACTAGT 1 cut(s) 221
BfaI CTAG 2 cut(s) 222, 651
BglII AGATCT 1 cut(s) 710
BisI GCNGC 1 cut(s) 254
BlsI GCNGC 1 cut(s) 255
BmcAI AGTACT 1 cut(s) 360
Bme1390I CCNGG 2 cut(s) 66, 147
BmgT120I GGNCC 1 cut(s) 149
BmiI GGNNCC 3 cut(s) 17, 150, 229
BmrFI CCNGG 2 cut(s) 66, 147
BmrI ACTGGG 1 cut(s) 637
BmuI ACTGGG 1 cut(s) 637
BpiI GAAGAC 1 cut(s) 306
BpmI CTGGAG 1 cut(s) 375
BpuMI CCSGG 1 cut(s) 147
BsaJI CCNNGG 1 cut(s) 146
Bsc4I CCNNNNNNNGG 3 cut(s) 146, 165, 166
Bse1I ACTGG 3 cut(s) 221, 366, 632
BseBI CCWGG 1 cut(s) 66
BseDI CCNNGG 1 cut(s) 146
BseGI GGATG 3 cut(s) 10, 43, 370
BseLI CCNNNNNNNGG 3 cut(s) 146, 165, 166
BseNI ACTGG 3 cut(s) 221, 366, 632
BseSI GKGCMC 1 cut(s) 102
BseXI GCAGC 1 cut(s) 240
Bsh1236I CGCG 1 cut(s) 204
BshFI GGCC 1 cut(s) 151
BsiSI CCGG 1 cut(s) 146
BslFI GGGAC 1 cut(s) 182
BslI CCNNNNNNNGG 3 cut(s) 146, 165, 166
BsmFI GGGAC 1 cut(s) 182
BsnI GGCC 1 cut(s) 151
Bsp1286I GDGCHC 1 cut(s) 102
Bsp143I GATC 5 cut(s) 8, 40, 136, 710, 718
BspACI CCGC 2 cut(s) 204, 443
BspANI GGCC 1 cut(s) 151
BspFNI CGCG 1 cut(s) 204
BspLI GGNNCC 3 cut(s) 17, 150, 229
BspPI GGATC 2 cut(s) 16, 131
BsrI ACTGG 3 cut(s) 221, 366, 632
BssECI CCNNGG 1 cut(s) 146
BssMI GATC 5 cut(s) 8, 40, 136, 710, 718
Bst2UI CCWGG 1 cut(s) 66
Bst4CI ACNGT 2 cut(s) 404, 584
BstAPI GCANNNNNTGC 1 cut(s) 187
BstDEI CTNAG 2 cut(s) 539, 545
BstF5I GGATG 3 cut(s) 10, 43, 370
BstFNI CGCG 1 cut(s) 204
BstKTI GATC 5 cut(s) 11, 43, 139, 713, 721
BstMBI GATC 5 cut(s) 8, 40, 136, 710, 718
BstMWI GCNNNNNNNGC 2 cut(s) 187, 196
BstNI CCWGG 1 cut(s) 66
BstNSI RCATGY 1 cut(s) 467
BstSCI CCNGG 2 cut(s) 64, 145
BstSLI GKGCMC 1 cut(s) 102
BstUI CGCG 1 cut(s) 204
BstV1I GCAGC 1 cut(s) 240
BstV2I GAAGAC 1 cut(s) 306
BstX2I RGATCY 1 cut(s) 710
BstYI RGATCY 1 cut(s) 710
BsuRI GGCC 1 cut(s) 151
BtsCI GGATG 3 cut(s) 10, 43, 370
BtsIMutI CAGTG 1 cut(s) 214
Cfr13I GGNCC 1 cut(s) 149
CseI GACGC 1 cut(s) 210
Csp6I GTAC 2 cut(s) 133, 359
CviAII CATG 3 cut(s) 70, 120, 464
CviJI RGCY 8 cut(s) 145, 151, 230, 253, 353, 411, 451, 645
CviKI_1 RGCY 8 cut(s) 145, 151, 230, 253, 353, 411, 451, 645
CviQI GTAC 2 cut(s) 133, 359
DdeI CTNAG 2 cut(s) 539, 545
DpnI GATC 5 cut(s) 10, 42, 138, 712, 720
DpnII GATC 5 cut(s) 8, 40, 136, 710, 718
EciI GGCGGA 1 cut(s) 458
EcoO109I RGGNCCY 1 cut(s) 149
EcoRII CCWGG 1 cut(s) 64
FaeI CATG 3 cut(s) 73, 123, 467
FaqI GGGAC 1 cut(s) 182
FatI CATG 3 cut(s) 69, 119, 463
FbaI TGATCA 1 cut(s) 40
Fnu4HI GCNGC 1 cut(s) 254
FokI GGATG 3 cut(s) 17, 30, 377
Fsp4HI GCNGC 1 cut(s) 254
FspBI CTAG 2 cut(s) 222, 651
GluI GCNGC 1 cut(s) 254
GsuI CTGGAG 1 cut(s) 375
HaeIII GGCC 1 cut(s) 151
HapII CCGG 1 cut(s) 146
HgaI GACGC 1 cut(s) 210
Hin1II CATG 3 cut(s) 73, 123, 467
HinfI GANTC 2 cut(s) 524, 591
HpaII CCGG 1 cut(s) 146
HphI GGTGA 3 cut(s) 148, 482, 684
Hpy166II GTNNAC 2 cut(s) 85, 214
Hpy188III TCNNGA 2 cut(s) 481, 517
Hpy8I GTNNAC 2 cut(s) 85, 214
Hpy99I CGWCG 1 cut(s) 204
HpyAV CCTTC 2 cut(s) 368, 523
HpyCH4III ACNGT 2 cut(s) 404, 584
HpyCH4V TGCA 4 cut(s) 190, 389, 432, 459
HpyF10VI GCNNNNNNNGC 2 cut(s) 187, 196
HpyF3I CTNAG 2 cut(s) 539, 545
Hsp92II CATG 3 cut(s) 73, 123, 467
Ksp22I TGATCA 1 cut(s) 40
Kzo9I GATC 5 cut(s) 8, 40, 136, 710, 718
LmnI GCTCC 1 cut(s) 227
Lsp1109I GCAGC 1 cut(s) 240
MaeI CTAG 2 cut(s) 222, 651
MaeIII GTNAC 3 cut(s) 108, 470, 690
MalI GATC 5 cut(s) 10, 42, 138, 712, 720
MboI GATC 5 cut(s) 8, 40, 136, 710, 718
MboII GAAGA 1 cut(s) 311
MflI RGATCY 1 cut(s) 710
MhlI GDGCHC 1 cut(s) 102
MluCI AATT 5 cut(s) 74, 185, 271, 505, 574
MmeI TCCRAC 1 cut(s) 548
MnlI CCTC 4 cut(s) 6, 241, 419, 705
MseI TTAA 5 cut(s) 195, 249, 276, 344, 724
MslI CAYNNNNRTG 2 cut(s) 334, 468
MspA1I CMGCKG 1 cut(s) 353
MspI CCGG 1 cut(s) 146
MspR9I CCNGG 2 cut(s) 66, 147
MvaI CCWGG 1 cut(s) 66
MvnI CGCG 1 cut(s) 204
MwoI GCNNNNNNNGC 2 cut(s) 187, 196
NciI CCSGG 1 cut(s) 147
NdeII GATC 5 cut(s) 8, 40, 136, 710, 718
NlaIII CATG 3 cut(s) 73, 123, 467
NlaIV GGNNCC 3 cut(s) 17, 150, 229
NmuCI GTSAC 3 cut(s) 108, 470, 690
NspI RCATGY 1 cut(s) 467
PciI ACATGT 1 cut(s) 463
PfeI GAWTC 2 cut(s) 524, 591
PkrI GCNGC 1 cut(s) 255
PscI ACATGT 1 cut(s) 463
Psp6I CCWGG 1 cut(s) 64
PspGI CCWGG 1 cut(s) 64
PspN4I GGNNCC 3 cut(s) 17, 150, 229
PspPI GGNCC 1 cut(s) 149
PsuI RGATCY 1 cut(s) 710
PvuII CAGCTG 1 cut(s) 353
RsaI GTAC 2 cut(s) 134, 360
RsaNI GTAC 2 cut(s) 133, 359
RseI CAYNNNNRTG 2 cut(s) 334, 468
SaqAI TTAA 5 cut(s) 195, 249, 276, 344, 724
SatI GCNGC 1 cut(s) 254
Sau3AI GATC 5 cut(s) 8, 40, 136, 710, 718
Sau96I GGNCC 1 cut(s) 149
ScaI AGTACT 1 cut(s) 360
ScrFI CCNGG 2 cut(s) 66, 147
SduI GDGCHC 1 cut(s) 102
SetI ASST 4 cut(s) 255, 355, 515, 697
SmiMI CAYNNNNRTG 2 cut(s) 334, 468
SpeI ACTAGT 1 cut(s) 221
Sse9I AATT 5 cut(s) 74, 185, 271, 505, 574
SsiI CCGC 2 cut(s) 204, 443
SspI AATATT 1 cut(s) 611
SspMI CTAG 2 cut(s) 222, 651
StyD4I CCNGG 2 cut(s) 64, 145
TaaI ACNGT 2 cut(s) 404, 584
TaqI TCGA 2 cut(s) 11, 480
TasI AATT 5 cut(s) 74, 185, 271, 505, 574
TatI WGTACW 1 cut(s) 358
TfiI GAWTC 2 cut(s) 524, 591
Tru1I TTAA 5 cut(s) 195, 249, 276, 344, 724
Tru9I TTAA 5 cut(s) 195, 249, 276, 344, 724
TscAI CASTG 1 cut(s) 221
TseFI GTSAC 3 cut(s) 108, 470, 690
TseI GCWGC 1 cut(s) 253
Tsp45I GTSAC 3 cut(s) 108, 470, 690
TspDTI ATGAA 4 cut(s) 86, 108, 312, 625
TspRI CASTG 1 cut(s) 221
XapI RAATTY 1 cut(s) 505
XceI RCATGY 1 cut(s) 467
XspI CTAG 2 cut(s) 222, 651
ZrmI AGTACT 1 cut(s) 360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.