Rroxscaffold_1G00053620

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
74555627 .. 74559140
3514 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00053620.1

Sequence Viewer

Length: 2286 bp
ATGGTTAATGTGATGGCCATGTTTGCTGGTTTTCAAAAACATCAGGAGAAAGCAAAGTACCTTGTGATTATTAACCATGGGTTTAGGTTTGTTCAACTTTTAATTTTCTTCCTGATCATTCTTTCAAGCTTGTGGGATTGTCATGTTGCTGCTGCAGCAGACAGTATTGCGGACACACTCAGGGTAGGTGACACTCTCAATTCCTCAAGCGCCTTGGTTTCCGCCTCCAACAAGTTCACCTTGCTTTTCATGACAAACGGTTCCAGTTCCAACTACAGCTATCTATTTATTAGGCGGTATAATGTAACTGGTGCGAATAAGGCGTGGGTTGCCAACCTTGCCACACCTATTTTATACCCTCATGGACTGCTTACCTTGGACTCCAACAACACTTTGAAAATTATTACAACGCAAGGTGGTCCGGGCGGTGGTGATGGTGATCCTCTTGTAGTGCTTGGCTCTGTGCCAAAAAGTAGTAGTACTGTTGTGGCTACTCTATTGGATTCTGGTAATTTCATCCTACAAGAGCTGAACTCCGATAGGTCGACGAAGCAAGTGTGGTGGCAAAGTTTTGATTATCCAACAGACACCTTTTTACCAGGCATGAAGTTAGGTGTCAACCATAGGAATGGGCACATTTGGTCTCTTACGTCATGGACGTCCTTAAACTATCCACTACCAGGGTGTTTTACCCTTGGTTGGGACCCAAATGGTCGCCAACTGGAGATTCGTGGACGAGGGGTGGTTTATTGGAGAAGCGGAAACTACAACACAAGTAGTAATGGATTTGAATTTATTTTACCGGATCAAAGGTTTATGTTCAATTATACCTTTGTTTCGAATGAGAAGGAAGACTACCTCACATACACAGCCAGAGATGATGATCAAAATGGTTATCTACCAGAATGGATGCTGAATTCTAATGGGAGACTTTTGGATTATTATGGATCAGTTGATATTGCACGAGCAGATGAGTGTGGAGGCAAAAGCACTGATGGACGAGGGTGCCAGGCAAATGATTCTTGTAAAGCGGATTTTGGTGATCAATTTCAACAAAAAAAGGGTTACTTTAAACCAGCCATCTCGAGTTCAACTTCAAGATGCCCGGACGGGCTTCAAGGTTCAAATTCAACGTATAATATTACTAGTACTGATTGTGAGGACACTTGCCGGCAAAACTGTGAGTGCCTTGGATTCGATTTTCTATCTCAGAGTCCAACTGGATGCCGATTTTGGAGTACAGATTGTGATTTCTATGAAGACCTCACTCAACCGGAAACTGCGAGTAGTTTTGTAAGATCAGTGGCACCGAAATCCTCACCCAGCAACAATAGTGAGAATGAGACTGATCAGAACCAATTGCTGGCCACGGGACATGATTTAAGCATATTTAGCTATGCATCAATCATGGCTGCCACATGTAACTTCACTGAAGAAAACAAGATTGGAGAAGGGGGATTTGGACCTGTTTATAAGGGAAAATTGTCGACGGGAAAAGAAATAGCAGTGAAGAGGCTTTCAAAATGTTCAGGGCAAGGAACATTAGAGTTTAAGAATGAATTGATCCTCATATATGAACTTCAACATACAAACCTTGTCCAGCTTTTTGGATTTTGCATTCATGGGGAAGAGAGGATGTTGATATATGAGTACATGCCAAACAAAAGTCTGGACTACTTTTTATTTGATACAACTGAAGGCGTTCTTCTCAATTGGCACAAGCGTTTCAGCATAATTGAGGGAATTACTCAAGGATTGCTTTATTTGCACAAATACTCGAGAAAGAAAGTAGTTCATAGAGACTTAAAAGCTAGTAATGTATTACTTGATAAAGATATGAATCCAAAAATTTCTGATTTTGGTATGGCAAGGATTTTCACACATACTGAACTTCAAATAAATACCGGCAGGATTGTTGGGACACTTGGTTACATGTCTCCTGAGTATGCAATGAATGGAATTTTTTCCATAAAATCTGATGCGTGGGAGTTATGGAAAGACGGTGCAGGGCTACAACTAATGGATTCAAACTTGGGTGATTCATGTAATAAGGATCAGTTTTTAAGATGCGTCAATGTTGGTCTACTATGCGTGGGGGATAATGCAGCCAATCGGCCTACCATGTCAGAGGTGATATCTATGTTGACAACTGGAAGCGTGCCACTACCTGAACCTACAAAACCATCATTTTGTACGGAAGAAGTGTTCGTTGCTACTATACTTGGAGACAAACCACAAATTGTGTCAACGAATGGTATGACCATTTCCGATATGTATGGACGTTAA

Protein Analysis

761

Amino Acids

84.61

Weight (kDa)

5.44

Isoelectric Point (pI)

38.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 109 - 219 3.2e-23 D-mannose binding lectin
Pkinase PF00069 476 - 662 8e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 479 - 662 3.7e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1473
AatII GACGTC 1 cut(s) 662
AccB1I GGYRCC 2 cut(s) 1005, 1306
AccB7I CCANNNNNTGG 1 cut(s) 1363
AccI GTMKAC 3 cut(s) 545, 1487, 2083
AciI CCGC 6 cut(s) 170, 222, 295, 426, 759, 1031
AclWI GGATC 5 cut(s) 434, 813, 955, 1558, 2061
AcoI YGGCCR 2 cut(s) 15, 1365
AcsI RAATTY 5 cut(s) 791, 916, 1126, 1848, 1959
AcuI CTGAAG 2 cut(s) 1452, 1716
AcyI GRCGYC 1 cut(s) 659
AfaI GTAC 6 cut(s) 59, 481, 1150, 1240, 1652, 2194
AfiI CCNNNNNNNGG 5 cut(s) 428, 680, 699, 700, 1363
AflIII ACRYGT 2 cut(s) 1418, 1932
AhlI ACTAGT 1 cut(s) 1145
AjnI CCWGG 3 cut(s) 598, 679, 1008
AjuI GAANNNNNNNTTGG 6 cut(s) 711, 743, 1428, 1443, 1460, 1475
AloI GAACNNNNNNTCC 2 cut(s) 2189, 2221
AluBI AGCT 6 cut(s) 129, 279, 529, 1395, 1603, 1811
AluI AGCT 6 cut(s) 129, 279, 529, 1395, 1603, 1811
Alw26I GTCTC 6 cut(s) 648, 922, 1337, 1794, 1941, 2220
AlwI GGATC 5 cut(s) 434, 813, 955, 1558, 2061
Ama87I CYCGRG 2 cut(s) 1084, 1777
AoxI GGCC 3 cut(s) 15, 1365, 2114
ApeKI GCWGC 5 cut(s) 149, 152, 155, 1412, 2105
ApoI RAATTY 5 cut(s) 791, 916, 1126, 1848, 1959
Asp700I GAANNNNTTC 2 cut(s) 1701, 1963
AspLEI GCGC 1 cut(s) 212
AspS9I GGNCC 3 cut(s) 419, 703, 1463
AsuC2I CCSGG 2 cut(s) 423, 1106
AsuHPI GGTGA 8 cut(s) 200, 229, 443, 449, 1052, 1311, 2048, 2143
AsuII TTCGAA 1 cut(s) 839
AvaI CYCGRG 2 cut(s) 1084, 1777
AvaII GGWCC 3 cut(s) 419, 703, 1463
BaeGI GKGCMC 1 cut(s) 636
BalI TGGCCA 2 cut(s) 17, 1367
BanI GGYRCC 2 cut(s) 1005, 1306
BarI GAAGNNNNNNTAC 2 cut(s) 839, 871
BauI CACGAG 1 cut(s) 963
BbsI GAAGAC 2 cut(s) 858, 1266
BbvI GCAGC 5 cut(s) 136, 139, 167, 1399, 2117
BccI CCATC 5 cut(s) 7, 428, 989, 1088, 2191
BciT130I CCWGG 3 cut(s) 600, 681, 1010
BclI TGATCA 4 cut(s) 114, 883, 1042, 1348
BcnI CCSGG 2 cut(s) 423, 1106
BcoDI GTCTC 6 cut(s) 648, 922, 1337, 1794, 1941, 2220
BcuI ACTAGT 1 cut(s) 1145
BfaI CTAG 2 cut(s) 1146, 1812
BfmI CTRYAG 2 cut(s) 153, 274
BfoI RGCGCY 1 cut(s) 213
BisI GCNGC 5 cut(s) 150, 153, 156, 1413, 2106
BlsI GCNGC 5 cut(s) 151, 154, 157, 1414, 2107
BmcAI AGTACT 2 cut(s) 481, 1150
Bme1390I CCNGG 5 cut(s) 423, 600, 681, 1010, 1106
Bme18I GGWCC 3 cut(s) 419, 703, 1463
BmeT110I CYCGRG 2 cut(s) 1084, 1777
BmgT120I GGNCC 3 cut(s) 419, 703, 1463
BmiI GGNNCC 5 cut(s) 262, 704, 705, 1007, 1308
BmrFI CCNGG 5 cut(s) 423, 600, 681, 1010, 1106
BmsI GCATC 6 cut(s) 900, 1091, 1214, 1409, 1969, 2057
BpiI GAAGAC 2 cut(s) 858, 1266
BplI GAGNNNNNCTC 2 cut(s) 518, 550
BpmI CTGGAG 1 cut(s) 743
Bpu14I TTCGAA 1 cut(s) 839
BpuEI CTTGAG 2 cut(s) 190, 1734
BpuMI CCSGG 2 cut(s) 423, 1106
BsaBI GATNNNNATC 3 cut(s) 438, 882, 1839
BsaHI GRCGYC 1 cut(s) 659
BsaI GGTCTC 1 cut(s) 648
BsaJI CCNNGG 7 cut(s) 76, 213, 375, 680, 694, 1189, 1368
BsaWI WCCGGW 2 cut(s) 802, 1273
Bsc4I CCNNNNNNNGG 5 cut(s) 428, 680, 699, 700, 1363
Bse118I RCCGGY 2 cut(s) 1170, 1904
Bse1I ACTGG 5 cut(s) 264, 313, 726, 1225, 2155
Bse3DI GCAATG 1 cut(s) 1956
Bse8I GATNNNNATC 3 cut(s) 438, 882, 1839
BseBI CCWGG 3 cut(s) 600, 681, 1010
BseDI CCNNGG 7 cut(s) 76, 213, 375, 680, 694, 1189, 1368
BseGI GGATG 4 cut(s) 516, 915, 1229, 1641
BseJI GATNNNNATC 3 cut(s) 438, 882, 1839
BseLI CCNNNNNNNGG 5 cut(s) 428, 680, 699, 700, 1363
BseMI GCAATG 1 cut(s) 1956
BseMII CTCAG 3 cut(s) 193, 1223, 1932
BseNI ACTGG 5 cut(s) 264, 313, 726, 1225, 2155
BseSI GKGCMC 1 cut(s) 636
BseXI GCAGC 5 cut(s) 136, 139, 167, 1399, 2117
BseYI CCCAGC 1 cut(s) 1322
BsgI GTGCAG 1 cut(s) 2025
BshFI GGCC 3 cut(s) 17, 1367, 2116
BshNI GGYRCC 2 cut(s) 1005, 1306
BsiHKCI CYCGRG 2 cut(s) 1084, 1777
BsiSI CCGG 6 cut(s) 422, 803, 1106, 1171, 1274, 1905
BslFI GGGAC 3 cut(s) 716, 1386, 1933
BslI CCNNNNNNNGG 5 cut(s) 428, 680, 699, 700, 1363
BsmAI GTCTC 6 cut(s) 648, 922, 1337, 1794, 1941, 2220
BsmFI GGGAC 3 cut(s) 716, 1386, 1933
BsmI GAATGC 1 cut(s) 1617
BsnI GGCC 3 cut(s) 17, 1367, 2116
Bso31I GGTCTC 1 cut(s) 648
BsoBI CYCGRG 2 cut(s) 1084, 1777
Bsp119I TTCGAA 1 cut(s) 839
Bsp1286I GDGCHC 1 cut(s) 636
Bsp19I CCATGG 1 cut(s) 76
BspACI CCGC 6 cut(s) 170, 222, 295, 426, 759, 1031
BspANI GGCC 3 cut(s) 17, 1367, 2116
BspCNI CTCAG 3 cut(s) 192, 1222, 1933
BspHI TCATGA 1 cut(s) 249
BspLI GGNNCC 5 cut(s) 262, 704, 705, 1007, 1308
BspMAI CTGCAG 1 cut(s) 157
BspPI GGATC 5 cut(s) 434, 813, 955, 1558, 2061
BspT104I TTCGAA 1 cut(s) 839
BspT107I GGYRCC 2 cut(s) 1005, 1306
BspTNI GGTCTC 1 cut(s) 648
BsrDI GCAATG 1 cut(s) 1956
BsrFI RCCGGY 2 cut(s) 1170, 1904
BsrI ACTGG 5 cut(s) 264, 313, 726, 1225, 2155
BssAI RCCGGY 2 cut(s) 1170, 1904
BssECI CCNNGG 7 cut(s) 76, 213, 375, 680, 694, 1189, 1368
BssNI GRCGYC 1 cut(s) 659
BssSI CACGAG 1 cut(s) 963
BssT1I CCWWGG 5 cut(s) 76, 213, 375, 694, 1189
Bst2BI CACGAG 1 cut(s) 963
Bst2UI CCWGG 3 cut(s) 600, 681, 1010
Bst4CI ACNGT 5 cut(s) 164, 260, 484, 1181, 2003
Bst6I CTCTTC 2 cut(s) 1505, 1623
BstACI GRCGYC 1 cut(s) 659
BstBI TTCGAA 1 cut(s) 839
BstC8I GCNNGC 3 cut(s) 1172, 1365, 2159
BstDEI CTNAG 3 cut(s) 179, 1209, 1941
BstDSI CCRYGG 2 cut(s) 76, 1368
BstF5I GGATG 4 cut(s) 516, 915, 1229, 1641
BstH2I RGCGCY 1 cut(s) 213
BstHHI GCGC 1 cut(s) 212
BstMAI GTCTC 6 cut(s) 648, 922, 1337, 1794, 1941, 2220
BstMWI GCNNNNNNNGC 7 cut(s) 23, 155, 320, 329, 338, 1392, 1765
BstNI CCWGG 3 cut(s) 600, 681, 1010
BstNSI RCATGY 3 cut(s) 1422, 1657, 1936
BstSCI CCNGG 5 cut(s) 421, 598, 679, 1008, 1104
BstSFI CTRYAG 2 cut(s) 153, 274
BstSLI GKGCMC 1 cut(s) 636
BstV1I GCAGC 5 cut(s) 136, 139, 167, 1399, 2117
BstV2I GAAGAC 2 cut(s) 858, 1266
BstXI CCANNNNNNTGG 2 cut(s) 629, 1607
BsuRI GGCC 3 cut(s) 17, 1367, 2116
BtgI CCRYGG 2 cut(s) 76, 1368
BtsCI GGATG 4 cut(s) 516, 915, 1229, 1641
BtsI GCAGTG 1 cut(s) 1512
BtsIMutI CAGTG 4 cut(s) 990, 1308, 1428, 1512
Cac8I GCNNGC 3 cut(s) 1172, 1365, 2159
CciI TCATGA 1 cut(s) 249
CfoI GCGC 1 cut(s) 212
Cfr10I RCCGGY 2 cut(s) 1170, 1904
Cfr13I GGNCC 3 cut(s) 419, 703, 1463
CseI GACGC 1 cut(s) 2059
Csp6I GTAC 6 cut(s) 58, 480, 1149, 1239, 1651, 2193
CspCI CAANNNNNGTGG 2 cut(s) 542, 577
CviQI GTAC 6 cut(s) 58, 480, 1149, 1239, 1651, 2193
DdeI CTNAG 3 cut(s) 179, 1209, 1941
DraI TTTAAA 1 cut(s) 1072
EaeI YGGCCR 2 cut(s) 15, 1365
Eam1104I CTCTTC 2 cut(s) 1505, 1623
EarI CTCTTC 2 cut(s) 1505, 1623
EciI GGCGGA 1 cut(s) 211
Eco130I CCWWGG 5 cut(s) 76, 213, 375, 694, 1189
Eco31I GGTCTC 1 cut(s) 648
Eco32I GATATC 1 cut(s) 2136
Eco47I GGWCC 3 cut(s) 419, 703, 1463
Eco57I CTGAAG 2 cut(s) 1452, 1716
Eco88I CYCGRG 2 cut(s) 1084, 1777
EcoO109I RGGNCCY 1 cut(s) 703
EcoRI GAATTC 1 cut(s) 916
EcoRII CCWGG 3 cut(s) 598, 679, 1008
EcoRV GATATC 1 cut(s) 2136
EcoT14I CCWWGG 5 cut(s) 76, 213, 375, 694, 1189
EcoT22I ATGCAT 1 cut(s) 1402
ErhI CCWWGG 5 cut(s) 76, 213, 375, 694, 1189
FalI AAGNNNNNCTT 8 cut(s) 224, 256, 1052, 1084, 1689, 1721, 1743, 1775
FaqI GGGAC 3 cut(s) 716, 1386, 1933
FbaI TGATCA 4 cut(s) 114, 883, 1042, 1348
FblI GTMKAC 3 cut(s) 545, 1487, 2083
Fnu4HI GCNGC 5 cut(s) 150, 153, 156, 1413, 2106
FokI GGATG 4 cut(s) 503, 922, 1236, 1648
Fsp4HI GCNGC 5 cut(s) 150, 153, 156, 1413, 2106
FspBI CTAG 2 cut(s) 1146, 1812
GlaI GCGC 1 cut(s) 211
GluI GCNGC 5 cut(s) 150, 153, 156, 1413, 2106
GsaI CCCAGC 1 cut(s) 1326
GsuI CTGGAG 1 cut(s) 743
HaeII RGCGCY 1 cut(s) 213
HaeIII GGCC 3 cut(s) 17, 1367, 2116
HapII CCGG 6 cut(s) 422, 803, 1106, 1171, 1274, 1905
HgaI GACGC 1 cut(s) 2059
HhaI GCGC 1 cut(s) 212
Hin1I GRCGYC 1 cut(s) 659
Hin6I GCGC 1 cut(s) 210
HinP1I GCGC 1 cut(s) 210
HincII GTYRAC 5 cut(s) 546, 619, 1488, 2145, 2247
HindII GTYRAC 5 cut(s) 546, 619, 1488, 2145, 2247
HindIII AAGCTT 1 cut(s) 127
HinfI GANTC 9 cut(s) 380, 503, 727, 1019, 1194, 1213, 1840, 2024, 2039
HpaII CCGG 6 cut(s) 422, 803, 1106, 1171, 1274, 1905
HphI GGTGA 8 cut(s) 200, 229, 443, 449, 1052, 1311, 2048, 2143
Hpy166II GTNNAC 8 cut(s) 237, 546, 619, 734, 1488, 2084, 2145, 2247
Hpy188I TCNGA 7 cut(s) 538, 1212, 1353, 1855, 1978, 2128, 2269
Hpy188III TCNNGA 8 cut(s) 44, 112, 250, 1084, 1098, 1670, 1779, 1940
Hpy8I GTNNAC 8 cut(s) 237, 546, 619, 734, 1488, 2084, 2145, 2247
Hpy99I CGWCG 2 cut(s) 550, 1492
HpyAV CCTTC 3 cut(s) 841, 1445, 1691
HpyCH4III ACNGT 5 cut(s) 164, 260, 484, 1181, 2003
HpyCH4IV ACGT 4 cut(s) 650, 659, 1133, 2281
HpyCH4V TGCA 8 cut(s) 155, 962, 1400, 1617, 1768, 1949, 2006, 2105
HpyF10VI GCNNNNNNNGC 7 cut(s) 23, 155, 320, 329, 338, 1392, 1765
HpyF3I CTNAG 3 cut(s) 179, 1209, 1941
HpySE526I ACGT 4 cut(s) 650, 659, 1133, 2281
Hsp92I GRCGYC 1 cut(s) 659
HspAI GCGC 1 cut(s) 210
KflI GGGWCCC 1 cut(s) 703
KroI GCCGGC 1 cut(s) 1170
KroNI GCCGGC 1 cut(s) 1172
Ksp22I TGATCA 4 cut(s) 114, 883, 1042, 1348
Lsp1109I GCAGC 5 cut(s) 136, 139, 167, 1399, 2117
LweI GCATC 6 cut(s) 900, 1091, 1214, 1409, 1969, 2057
MaeI CTAG 2 cut(s) 1146, 1812
MaeII ACGT 4 cut(s) 650, 659, 1133, 2281
MaeIII GTNAC 5 cut(s) 188, 304, 1064, 1421, 1928
MboII GAAGA 8 cut(s) 100, 863, 1271, 1445, 1522, 1640, 1697, 2210
MfeI CAATTG 2 cut(s) 1358, 1711
MhlI GDGCHC 1 cut(s) 636
MlsI TGGCCA 2 cut(s) 17, 1367
MluNI TGGCCA 2 cut(s) 17, 1367
MlyI GAGTC 2 cut(s) 374, 1222
MmeI TCCRAC 5 cut(s) 252, 294, 408, 605, 1241
Mox20I TGGCCA 2 cut(s) 17, 1367
Mph1103I ATGCAT 1 cut(s) 1402
MroNI GCCGGC 1 cut(s) 1170
MroXI GAANNNNTTC 2 cut(s) 1701, 1963
MscI TGGCCA 2 cut(s) 17, 1367
MslI CAYNNNNRTG 1 cut(s) 627
Msp20I TGGCCA 2 cut(s) 17, 1367
MspI CCGG 6 cut(s) 422, 803, 1106, 1171, 1274, 1905
MspR9I CCNGG 5 cut(s) 423, 600, 681, 1010, 1106
MunI CAATTG 2 cut(s) 1358, 1711
Mva1269I GAATGC 1 cut(s) 1617
MvaI CCWGG 3 cut(s) 600, 681, 1010
MwoI GCNNNNNNNGC 7 cut(s) 23, 155, 320, 329, 338, 1392, 1765
NaeI GCCGGC 1 cut(s) 1172
NciI CCSGG 2 cut(s) 423, 1106
NcoI CCATGG 1 cut(s) 76
NgoMIV GCCGGC 1 cut(s) 1170
NlaIV GGNNCC 5 cut(s) 262, 704, 705, 1007, 1308
NmuCI GTSAC 1 cut(s) 188
NsiI ATGCAT 1 cut(s) 1402
NspI RCATGY 3 cut(s) 1422, 1657, 1936
NspV TTCGAA 1 cut(s) 839
PaeR7I CTCGAG 2 cut(s) 1084, 1777
PagI TCATGA 1 cut(s) 249
PciI ACATGT 2 cut(s) 1418, 1932
PcsI WCGNNNNNNNCGW 1 cut(s) 656
PctI GAATGC 1 cut(s) 1617
PdiI GCCGGC 1 cut(s) 1172
PdmI GAANNNNTTC 2 cut(s) 1701, 1963
PfeI GAWTC 7 cut(s) 503, 727, 1019, 1194, 1840, 2024, 2039
PflMI CCANNNNNTGG 1 cut(s) 1363
PkrI GCNGC 5 cut(s) 151, 154, 157, 1414, 2107
PleI GAGTC 2 cut(s) 374, 1221
PpsI GAGTC 2 cut(s) 374, 1221
PpuMI RGGWCCY 1 cut(s) 703
PscI ACATGT 2 cut(s) 1418, 1932
PsiI TTATAA 1 cut(s) 1473
Psp5II RGGWCCY 1 cut(s) 703
Psp6I CCWGG 3 cut(s) 598, 679, 1008
PspFI CCCAGC 1 cut(s) 1322
PspGI CCWGG 3 cut(s) 598, 679, 1008
PspN4I GGNNCC 5 cut(s) 262, 704, 705, 1007, 1308
PspPI GGNCC 3 cut(s) 419, 703, 1463
PspPPI RGGWCCY 1 cut(s) 703
PstI CTGCAG 1 cut(s) 157
RsaI GTAC 6 cut(s) 59, 481, 1150, 1240, 1652, 2194
RsaNI GTAC 6 cut(s) 58, 480, 1149, 1239, 1651, 2193
RseI CAYNNNNRTG 1 cut(s) 627
SalI GTCGAC 2 cut(s) 544, 1486
SatI GCNGC 5 cut(s) 150, 153, 156, 1413, 2106
Sau96I GGNCC 3 cut(s) 419, 703, 1463
ScaI AGTACT 2 cut(s) 481, 1150
SchI GAGTC 2 cut(s) 374, 1222
ScrFI CCNGG 5 cut(s) 423, 600, 681, 1010, 1106
SduI GDGCHC 1 cut(s) 636
SfaNI GCATC 6 cut(s) 900, 1091, 1214, 1409, 1969, 2057
SfcI CTRYAG 2 cut(s) 153, 274
Sfr274I CTCGAG 2 cut(s) 1084, 1777
SfuI TTCGAA 1 cut(s) 839
SinI GGWCC 3 cut(s) 419, 703, 1463
SlaI CTCGAG 2 cut(s) 1084, 1777
SmiMI CAYNNNNRTG 1 cut(s) 627
SmlI CTYRAG 4 cut(s) 205, 1084, 1749, 1777
SmoI CTYRAG 4 cut(s) 205, 1084, 1749, 1777
SpeI ACTAGT 1 cut(s) 1145
SsiI CCGC 6 cut(s) 170, 222, 295, 426, 759, 1031
SspI AATATT 1 cut(s) 1141
SspMI CTAG 2 cut(s) 1146, 1812
StyD4I CCNGG 5 cut(s) 421, 598, 679, 1008, 1104
StyI CCWWGG 5 cut(s) 76, 213, 375, 694, 1189
TaaI ACNGT 5 cut(s) 164, 260, 484, 1181, 2003
TaiI ACGT 4 cut(s) 653, 662, 1136, 2284
TaqI TCGA 6 cut(s) 545, 839, 1085, 1197, 1487, 1778
TatI WGTACW 4 cut(s) 479, 1148, 1238, 1650
TfiI GAWTC 7 cut(s) 503, 727, 1019, 1194, 1840, 2024, 2039
TscAI CASTG 4 cut(s) 997, 1308, 1435, 1512
TseFI GTSAC 1 cut(s) 188
TseI GCWGC 5 cut(s) 149, 152, 155, 1412, 2105
Tsp45I GTSAC 1 cut(s) 188
TspGWI ACGGA 1 cut(s) 2210
TspRI CASTG 4 cut(s) 997, 1308, 1435, 1512
Van91I CCANNNNNTGG 1 cut(s) 1363
VpaK11BI GGWCC 3 cut(s) 419, 703, 1463
XapI RAATTY 5 cut(s) 791, 916, 1126, 1848, 1959
XceI RCATGY 3 cut(s) 1422, 1657, 1936
XhoI CTCGAG 2 cut(s) 1084, 1777
XmiI GTMKAC 3 cut(s) 545, 1487, 2083
XmnI GAANNNNTTC 2 cut(s) 1701, 1963
XspI CTAG 2 cut(s) 1146, 1812
ZraI GACGTC 1 cut(s) 660
ZrmI AGTACT 2 cut(s) 481, 1150
Zsp2I ATGCAT 1 cut(s) 1402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.