Rh5CG194800

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
19360210 .. 19367456
7247 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG194800.1

Sequence Viewer

Length: 444 bp
ATGACCCTCTGCAGCCAGGAACACACTATTGCACAACAATCTGCTACTGAGATTGGAAATAGAAAACGTAAAGAAAATCCAAGTGTTACAAATACTGGTAGTGATATAGCACAGAGCAAACAGAAAGATGCAAGTGCATGGGAGTTATGGAATGAAGGTGCGGAGTTAGCATTCAAGGATCCAACACTAGGTGATTCATATCATGAGGATCAATTGTTGAGATGCATTCATGTTGGTCTACTATGCGTGGAGGAGAATGGAGCCGATCGGCCTACTATGTTAGAAGTCATTTCCATGTTGACAAGTGAAGGCATGTCACTACCTACGCCTACAAAGCCAGCATTCTGTAGGGAGAGAAGAGTGGTCAGAACTGGTACGGTTGGAAAAGCTTCAGAAAATGCATCGATAAATACAATGTCCAATTCTGATTATGATGCGCGTTAA

Protein Analysis

147

Amino Acids

16.17

Weight (kDa)

5.21

Isoelectric Point (pI)

42.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 238
AccII CGCG 1 cut(s) 439
AciI CCGC 1 cut(s) 161
AclWI GGATC 3 cut(s) 173, 186, 216
AcuI CTGAAG 1 cut(s) 375
AdeI CACNNNGTG 1 cut(s) 191
AfaI GTAC 1 cut(s) 376
AfiI CCNNNNNNNGG 1 cut(s) 188
AgsI TTSAA 1 cut(s) 175
AjnI CCWGG 1 cut(s) 15
AluBI AGCT 1 cut(s) 389
AluI AGCT 1 cut(s) 389
AlwI GGATC 3 cut(s) 173, 186, 216
AoxI GGCC 1 cut(s) 269
ApeKI GCWGC 1 cut(s) 12
Asp700I GAANNNNTTC 1 cut(s) 388
AspLEI GCGC 1 cut(s) 439
AsuHPI GGTGA 1 cut(s) 203
BamHI GGATCC 1 cut(s) 178
BbvI GCAGC 1 cut(s) 24
BciT130I CCWGG 1 cut(s) 17
BfaI CTAG 1 cut(s) 188
BfmI CTRYAG 2 cut(s) 10, 346
BisI GCNGC 1 cut(s) 13
BlsI GCNGC 1 cut(s) 14
Bme1390I CCNGG 1 cut(s) 17
BmiI GGNNCC 2 cut(s) 180, 262
BmrFI CCNGG 1 cut(s) 17
BmsI GCATC 4 cut(s) 118, 212, 410, 424
Bsa29I ATCGAT 1 cut(s) 404
BsaBI GATNNNNATC 1 cut(s) 198
Bsc4I CCNNNNNNNGG 1 cut(s) 188
Bse1I ACTGG 2 cut(s) 100, 376
Bse8I GATNNNNATC 1 cut(s) 198
BseBI CCWGG 1 cut(s) 17
BseCI ATCGAT 1 cut(s) 404
BseJI GATNNNNATC 1 cut(s) 198
BseLI CCNNNNNNNGG 1 cut(s) 188
BseMII CTCAG 1 cut(s) 39
BseNI ACTGG 2 cut(s) 100, 376
BseRI GAGGAG 1 cut(s) 266
BseXI GCAGC 1 cut(s) 24
Bsh1236I CGCG 1 cut(s) 439
Bsh1285I CGRYCG 1 cut(s) 268
BshFI GGCC 1 cut(s) 271
BshVI ATCGAT 1 cut(s) 404
BsiEI CGRYCG 1 cut(s) 268
BslI CCNNNNNNNGG 1 cut(s) 188
BsmI GAATGC 3 cut(s) 170, 225, 341
BsnI GGCC 1 cut(s) 271
Bsp143I GATC 3 cut(s) 178, 208, 265
BspACI CCGC 1 cut(s) 161
BspANI GGCC 1 cut(s) 271
BspCNI CTCAG 1 cut(s) 40
BspDI ATCGAT 1 cut(s) 404
BspFNI CGCG 1 cut(s) 439
BspHI TCATGA 1 cut(s) 202
BspLI GGNNCC 2 cut(s) 180, 262
BspMAI CTGCAG 1 cut(s) 14
BspPI GGATC 3 cut(s) 173, 186, 216
BsrI ACTGG 2 cut(s) 100, 376
BssMI GATC 3 cut(s) 178, 208, 265
Bst2UI CCWGG 1 cut(s) 17
Bst4CI ACNGT 1 cut(s) 379
Bst6I CTCTTC 1 cut(s) 352
BstC8I GCNNGC 1 cut(s) 339
BstDEI CTNAG 1 cut(s) 48
BstFNI CGCG 1 cut(s) 439
BstHHI GCGC 1 cut(s) 439
BstKTI GATC 3 cut(s) 181, 211, 268
BstMBI GATC 3 cut(s) 178, 208, 265
BstMCI CGRYCG 1 cut(s) 268
BstMWI GCNNNNNNNGC 2 cut(s) 167, 334
BstNI CCWGG 1 cut(s) 17
BstNSI RCATGY 1 cut(s) 316
BstSCI CCNGG 1 cut(s) 15
BstSFI CTRYAG 2 cut(s) 10, 346
BstUI CGCG 1 cut(s) 439
BstV1I GCAGC 1 cut(s) 24
BstX2I RGATCY 1 cut(s) 178
BstYI RGATCY 1 cut(s) 178
Bsu15I ATCGAT 1 cut(s) 404
BsuRI GGCC 1 cut(s) 271
BsuTUI ATCGAT 1 cut(s) 404
Cac8I GCNNGC 1 cut(s) 339
CciI TCATGA 1 cut(s) 202
CfoI GCGC 1 cut(s) 439
ClaI ATCGAT 1 cut(s) 404
Csp6I GTAC 1 cut(s) 375
CviAII CATG 5 cut(s) 138, 203, 230, 295, 313
CviJI RGCY 5 cut(s) 15, 263, 271, 337, 389
CviKI_1 RGCY 5 cut(s) 15, 263, 271, 337, 389
CviQI GTAC 1 cut(s) 375
DdeI CTNAG 1 cut(s) 48
DpnI GATC 3 cut(s) 180, 210, 267
DpnII GATC 3 cut(s) 178, 208, 265
DraIII CACNNNGTG 1 cut(s) 191
Eam1104I CTCTTC 1 cut(s) 352
EarI CTCTTC 1 cut(s) 352
Eco57I CTGAAG 1 cut(s) 375
EcoRII CCWGG 1 cut(s) 15
EcoT22I ATGCAT 2 cut(s) 227, 403
FaeI CATG 5 cut(s) 141, 206, 233, 298, 316
FatI CATG 5 cut(s) 137, 202, 229, 294, 312
FblI GTMKAC 1 cut(s) 238
Fnu4HI GCNGC 1 cut(s) 13
Fsp4HI GCNGC 1 cut(s) 13
FspBI CTAG 1 cut(s) 188
GlaI GCGC 1 cut(s) 438
GluI GCNGC 1 cut(s) 13
HaeIII GGCC 1 cut(s) 271
HhaI GCGC 1 cut(s) 439
Hin1II CATG 5 cut(s) 141, 206, 233, 298, 316
Hin6I GCGC 1 cut(s) 437
HinP1I GCGC 1 cut(s) 437
HincII GTYRAC 1 cut(s) 300
HindII GTYRAC 1 cut(s) 300
HindIII AAGCTT 1 cut(s) 387
HinfI GANTC 1 cut(s) 194
HphI GGTGA 1 cut(s) 203
Hpy166II GTNNAC 2 cut(s) 239, 300
Hpy188I TCNGA 3 cut(s) 368, 394, 427
Hpy188III TCNNGA 1 cut(s) 203
Hpy8I GTNNAC 2 cut(s) 239, 300
HpyAV CCTTC 2 cut(s) 149, 302
HpyCH4III ACNGT 1 cut(s) 379
HpyCH4IV ACGT 1 cut(s) 67
HpyCH4V TGCA 6 cut(s) 12, 32, 131, 137, 225, 401
HpyF10VI GCNNNNNNNGC 2 cut(s) 167, 334
HpyF3I CTNAG 1 cut(s) 48
HpySE526I ACGT 1 cut(s) 67
Hsp92II CATG 5 cut(s) 141, 206, 233, 298, 316
HspAI GCGC 1 cut(s) 437
Kzo9I GATC 3 cut(s) 178, 208, 265
LmnI GCTCC 1 cut(s) 260
LpnPI CCDG 5 cut(s) 2, 29, 81, 351, 357
Lsp1109I GCAGC 1 cut(s) 24
LweI GCATC 4 cut(s) 118, 212, 410, 424
MaeI CTAG 1 cut(s) 188
MaeII ACGT 1 cut(s) 67
MaeIII GTNAC 2 cut(s) 85, 315
MalI GATC 3 cut(s) 180, 210, 267
MboI GATC 3 cut(s) 178, 208, 265
MboII GAAGA 1 cut(s) 369
MfeI CAATTG 1 cut(s) 212
MflI RGATCY 1 cut(s) 178
MluCI AATT 2 cut(s) 212, 421
MmeI TCCRAC 2 cut(s) 206, 361
MnlI CCTC 3 cut(s) 17, 199, 244
Mph1103I ATGCAT 2 cut(s) 227, 403
MroXI GAANNNNTTC 1 cut(s) 388
MseI TTAA 1 cut(s) 442
MslI CAYNNNNRTG 1 cut(s) 293
MspR9I CCNGG 1 cut(s) 17
MunI CAATTG 1 cut(s) 212
Mva1269I GAATGC 3 cut(s) 170, 225, 341
MvaI CCWGG 1 cut(s) 17
MvnI CGCG 1 cut(s) 439
MwoI GCNNNNNNNGC 2 cut(s) 167, 334
NdeII GATC 3 cut(s) 178, 208, 265
NlaIII CATG 5 cut(s) 141, 206, 233, 298, 316
NlaIV GGNNCC 2 cut(s) 180, 262
NmuCI GTSAC 1 cut(s) 315
NsiI ATGCAT 2 cut(s) 227, 403
NspI RCATGY 1 cut(s) 316
PagI TCATGA 1 cut(s) 202
PctI GAATGC 3 cut(s) 170, 225, 341
PdmI GAANNNNTTC 1 cut(s) 388
PfeI GAWTC 1 cut(s) 194
PkrI GCNGC 1 cut(s) 14
Ple19I CGATCG 1 cut(s) 268
Psp6I CCWGG 1 cut(s) 15
PspGI CCWGG 1 cut(s) 15
PspN4I GGNNCC 2 cut(s) 180, 262
PstI CTGCAG 1 cut(s) 14
PsuI RGATCY 1 cut(s) 178
PvuI CGATCG 1 cut(s) 268
RsaI GTAC 1 cut(s) 376
RsaNI GTAC 1 cut(s) 375
RseI CAYNNNNRTG 1 cut(s) 293
SaqAI TTAA 1 cut(s) 442
SatI GCNGC 1 cut(s) 13
Sau3AI GATC 3 cut(s) 178, 208, 265
ScrFI CCNGG 1 cut(s) 17
SetI ASST 5 cut(s) 70, 160, 193, 325, 391
SfaNI GCATC 4 cut(s) 118, 212, 410, 424
SfcI CTRYAG 2 cut(s) 10, 346
SmiMI CAYNNNNRTG 1 cut(s) 293
Sse9I AATT 2 cut(s) 212, 421
SsiI CCGC 1 cut(s) 161
SspMI CTAG 1 cut(s) 188
StyD4I CCNGG 1 cut(s) 15
TaaI ACNGT 1 cut(s) 379
TaiI ACGT 1 cut(s) 70
TaqI TCGA 1 cut(s) 404
TasI AATT 2 cut(s) 212, 421
TfiI GAWTC 1 cut(s) 194
Tru1I TTAA 1 cut(s) 442
Tru9I TTAA 1 cut(s) 442
TseFI GTSAC 1 cut(s) 315
TseI GCWGC 1 cut(s) 12
Tsp45I GTSAC 1 cut(s) 315
TspDTI ATGAA 3 cut(s) 168, 186, 218
XceI RCATGY 1 cut(s) 316
XmiI GTMKAC 1 cut(s) 238
XmnI GAANNNNTTC 1 cut(s) 388
XspI CTAG 1 cut(s) 188
Zsp2I ATGCAT 2 cut(s) 227, 403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.