Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000096

Physical Location & Seq

Genomic Coordinates Forward (+)

9359458 .. 9366191

Gene Structure 6734 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g15110.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGCCATCTATGGCTAGAAGTCTCACCCTAATTTTGATCCTCATTACCCTGTTGGACTCCGGCACCTTTACCTTTATTCAGAGAGTGAAGTCCGATGATATCCGGAATGGAACAGCCTCTCCAGGCATGTTTCGGCCAGGCATGAAGCTAGGTGTGAACCATAGGAATGGCTACATTTGGTCACTTTCATCATCACCAGGTCCTTTGGGTTCTTTCACACTTTCTTGGGAGCCCCAAGGACGCCAATTGCATATTAGCCTAGGTGAGGTGGTTTATTGGAGTAGTGGAGTCTTTAAAGATGGGAGGTTCCAATATGTAACACTAAGCAGGTACAACTTCACCATTGTTTCAAATAAAGATGAAGACTCCATCGCCTACAGTACTGTGGATCAAACTGATAGAGTTTCAGCATGGCTGCTGAACAACGCGGGGGATCTGTATGATACTTACACAGGAGAAGCCATAGCACAAGCAGATAACTGCGACGGCTATAGCACCGATAGAGGGTGCCATAGAAGACTAAGGCCAACTAAATGCATGGCGACAGTAGGGTACGAGTTTCAGCTGACAAATGCTATCTGTGATCCAATCCCTTCTAGTGCAAGAACCCCATATTATTTTATGAATGGAGGTTATGGCATTAGTGAGTGCAAGGCTGCTTGTTGGAAAGATTGTGACTGCCTTGGGTTTGATATTCCGAGTAATGAAACAGCTCGATGCCGGTTTTGGAGTGTGGACTGTCAATTTGAAGAAGACAGTGGATCAGGTTCTGGATCTAGTTTTGTGCTGTCAAGATTAGTCCCTTTAGAATCATTACCTCCCATCAGTATGAATCCAGCACGTAAGTGGATATGGATTGGCACTGTTATTGTCTCTGCTCTACTGGTACTAGTGATTTTGTTCGCCTGCTATCTACAACTAAGAAGAACAGGAAGGAGACTAGTAGTTTCAGGCCGAAATGTGGCAAAGGTTCAGGAAATTCTTACCTTGATGAGACCTAATATACCTACTCATGAGAATGGAGTTGAAAATGATGGAAAGATGGGACAAGATATAAGTGTCTTTAGCTACAAATCCATTTTGGCTGCCACACGCAACTTCTCCGATGAAAACAAACTCGGTGAAGGGGGGTTTGGATTTGTTTATCAGGGAAAACTGGTGACGGGACAAGAAATAGCTGTGAAGAAACTTTCCAAAAATTCAGAGCAAGGAGCCCTGGAGTTTAAGAATGAATTGATACTTGTATATGAACTCCAACATATGAACCTTGTTCGGCTATTTGGATTTTGCATTCATGGTGAAGAGAGGATGCTGATATATGAATACATGCCAAACAAAAGTCTGGACTACTTTTTATTTGATTCAACCAGAAGTGTGCTACTAGACTGGAAAAAACGTTTCAACATAATTGAAGGAGTCGCTCAAGGATTGCTTTACTTGCACAAATACTCCAGAATGAGAGTGATTCATAGAGATTTAAAAGCCAGTAATATTCTACTCGATGAAAGCATGAATCCAAGAATCTCTGATTTTGGTATGGCAAGGACTTTAAGCACAAAGGATGAACTGGAAGCAAATACTAAGAGGATTGTTGGGACATACGGCTACATGTCACCTGAGTATGTCATGGGAGGGAACTTCTCCATAAAATCAGATGTGTACAGTTTTGGAGTGTTGATGCTTGAAATATTAGGTGGTAGGAGAAACAACAGCTTCTACAACGATGATCGCGTGCTCACTTTAGTCGAATATACATGGGAGTTATGGAAAAAGGGTGCAGCACTAGAACTAATGGATCCAACACTAGGAAATTCCTGTGATGAGGATCAATTGTTAAGATGCATCCATGTTGGCCTGCTTTGTGTTGAAGAGAAGGCAACTGATAGGCCAAACATGTCGGATATCATATCCATGTTGACAAATAAAAGCGTGCCTTTACCTAAACCAACAAAGCCAGCATTTTGTACAAAGAGAAATGTGATCATGTCTGGTGTAGATGGAAAGGGGCCAGAACTTGTATCAATAAATGGTCTGTCCATTTCTTATTTTGTTGCCCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

687

Amino Acids

77.01

Weight (kDa)

7.45

Isoelectric Point (pI)

43.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	368 - 568	1.8e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	370 - 638	1.9e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000096)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica	MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica	Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis	pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis	RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata	RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora	Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa	Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha	Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana	Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	318
AccB1I	GGYRCC	2 cut(s)	62, 507
AccII	CGCG	2 cut(s)	428, 1731
AccIII	TCCGGA	1 cut(s)	102
AciI	CCGC	1 cut(s)	428
AclI	AACGTT	1 cut(s)	1396
AclWI	GGATC	9 cut(s)	31, 396, 441, 578, 769, 781, 1790, 1803, 1833
AcoI	YGGCCR	1 cut(s)	134
AcsI	RAATTY	3 cut(s)	978, 1198, 1810
AcyI	GRCGYC	1 cut(s)	241
AfaI	GTAC	6 cut(s)	332, 382, 554, 888, 1661, 1966
AfiI	CCNNNNNNNGG	4 cut(s)	265, 504, 961, 1805
AflIII	ACRYGT	2 cut(s)	1608, 1893
AgsI	TTSAA	8 cut(s)	351, 749, 1028, 1365, 1402, 1412, 1685, 1868
AhlI	ACTAGT	2 cut(s)	889, 940
AjnI	CCWGG	4 cut(s)	121, 136, 196, 1215
AjuI	GAANNNNNNNTTGG	2 cut(s)	1116, 1148
AleI	CACNNNNGTG	1 cut(s)	844
AloI	GAACNNNNNNTCC	2 cut(s)	103, 135
AluBI	AGCT	6 cut(s)	148, 565, 713, 1068, 1178, 1713
AluI	AGCT	6 cut(s)	148, 565, 713, 1068, 1178, 1713
Alw21I	GWGCWC	1 cut(s)	1737
Alw26I	GTCTC	4 cut(s)	26, 877, 931, 988
AlwI	GGATC	9 cut(s)	31, 396, 441, 578, 769, 781, 1790, 1803, 1833
AlwNI	CAGNNNCTG	1 cut(s)	770
Aor13HI	TCCGGA	1 cut(s)	102
AoxI	GGCC	6 cut(s)	134, 524, 952, 1852, 1886, 2006
ApeKI	GCWGC	4 cut(s)	415, 656, 1085, 1778
ApoI	RAATTY	3 cut(s)	978, 1198, 1810
ArsI	GACNNNNNNTTYG	2 cut(s)	728, 760
AspA2I	CCTAGG	1 cut(s)	259
AspS9I	GGNCC	2 cut(s)	200, 2006
AsuHPI	GGTGA	8 cut(s)	16, 186, 275, 331, 1133, 1171, 1310, 1605
AvaII	GGWCC	1 cut(s)	200
AvrII	CCTAGG	1 cut(s)	259
BamHI	GGATCC	1 cut(s)	1795
BanI	GGYRCC	2 cut(s)	62, 507
BanII	GRGCYC	2 cut(s)	234, 1216
BbsI	GAAGAC	3 cut(s)	369, 523, 759
Bbv12I	GWGCWC	1 cut(s)	1737
BbvI	GCAGC	4 cut(s)	402, 643, 1072, 1790
BccI	CCATC	7 cut(s)	13, 293, 377, 830, 1028, 1036, 1991
BceAI	ACGGC	2 cut(s)	502, 1618
BciT130I	CCWGG	4 cut(s)	123, 138, 198, 1217
BclI	TGATCA	1 cut(s)	1980
BcoDI	GTCTC	4 cut(s)	26, 877, 931, 988
BcuI	ACTAGT	2 cut(s)	889, 940
BfmI	CTRYAG	2 cut(s)	376, 490
BfuAI	ACCTGC	1 cut(s)	318
BisI	GCNGC	4 cut(s)	416, 657, 1086, 1779
BlnI	CCTAGG	1 cut(s)	259
BlsI	GCNGC	4 cut(s)	417, 658, 1087, 1780
BmcAI	AGTACT	1 cut(s)	382
Bme1390I	CCNGG	4 cut(s)	123, 138, 198, 1217
Bme18I	GGWCC	1 cut(s)	200
BmgT120I	GGNCC	2 cut(s)	200, 2006
BmiI	GGNNCC	7 cut(s)	64, 231, 308, 509, 1213, 1797, 2007
BmrFI	CCNGG	4 cut(s)	123, 138, 198, 1217
BmsI	GCATC	5 cut(s)	707, 1299, 1668, 1829, 1851
BpiI	GAAGAC	3 cut(s)	369, 523, 759
BpmI	CTGGAG	3 cut(s)	105, 1238, 1435
BpuEI	CTTGAG	1 cut(s)	1407
BsaAI	YACGTR	1 cut(s)	842
BsaBI	GATNNNNATC	1 cut(s)	1824
BsaHI	GRCGYC	1 cut(s)	241
BsaI	GGTCTC	1 cut(s)	988
BsaJI	CCNNGG	4 cut(s)	235, 259, 682, 1215
BsaWI	WCCGGW	1 cut(s)	102
BsaXI	ACNNNNNCTCC	4 cut(s)	103, 133, 1433, 1463
Bsc4I	CCNNNNNNNGG	4 cut(s)	265, 504, 961, 1805
Bse118I	RCCGGY	1 cut(s)	720
Bse1I	ACTGG	5 cut(s)	888, 1161, 1391, 1485, 1572
Bse8I	GATNNNNATC	1 cut(s)	1824
BseAI	TCCGGA	1 cut(s)	102
BseBI	CCWGG	4 cut(s)	123, 138, 198, 1217
BseDI	CCNNGG	4 cut(s)	235, 259, 682, 1215
BseGI	GGATG	3 cut(s)	1314, 1567, 1842
BseJI	GATNNNNATC	1 cut(s)	1824
BseLI	CCNNNNNNNGG	4 cut(s)	265, 504, 961, 1805
BseMII	CTCAG	1 cut(s)	1608
BseNI	ACTGG	5 cut(s)	888, 1161, 1391, 1485, 1572
BseXI	GCAGC	4 cut(s)	402, 643, 1072, 1790
BsgI	GTGCAG	1 cut(s)	1797
Bsh1236I	CGCG	2 cut(s)	428, 1731
BshFI	GGCC	6 cut(s)	136, 526, 954, 1854, 1888, 2008
BshNI	GGYRCC	2 cut(s)	62, 507
BsiHKAI	GWGCWC	1 cut(s)	1737
BsiSI	CCGG	3 cut(s)	60, 103, 721
BslFI	GGGAC	4 cut(s)	785, 1059, 1179, 1609
BslI	CCNNNNNNNGG	4 cut(s)	265, 504, 961, 1805
BsmAI	GTCTC	4 cut(s)	26, 877, 931, 988
BsmFI	GGGAC	4 cut(s)	785, 1059, 1179, 1609
BsmI	GAATGC	1 cut(s)	1290
BsnI	GGCC	6 cut(s)	136, 526, 954, 1854, 1888, 2008
Bso31I	GGTCTC	1 cut(s)	988
Bsp1286I	GDGCHC	3 cut(s)	234, 1216, 1737
Bsp13I	TCCGGA	1 cut(s)	102
Bsp1407I	TGTACA	2 cut(s)	1659, 1964
BspACI	CCGC	1 cut(s)	428
BspANI	GGCC	6 cut(s)	136, 526, 954, 1854, 1888, 2008
BspCNI	CTCAG	1 cut(s)	1609
BspEI	TCCGGA	1 cut(s)	102
BspFNI	CGCG	2 cut(s)	428, 1731
BspHI	TCATGA	1 cut(s)	1012
BspLI	GGNNCC	7 cut(s)	64, 231, 308, 509, 1213, 1797, 2007
BspMI	ACCTGC	1 cut(s)	318
BspPI	GGATC	9 cut(s)	31, 396, 441, 578, 769, 781, 1790, 1803, 1833
BspT107I	GGYRCC	2 cut(s)	62, 507
BspTNI	GGTCTC	1 cut(s)	988
BsrFI	RCCGGY	1 cut(s)	720
BsrGI	TGTACA	2 cut(s)	1659, 1964
BsrI	ACTGG	5 cut(s)	888, 1161, 1391, 1485, 1572
BssAI	RCCGGY	1 cut(s)	720
BssECI	CCNNGG	4 cut(s)	235, 259, 682, 1215
BssNI	GRCGYC	1 cut(s)	241
BssT1I	CCWWGG	3 cut(s)	235, 259, 682
Bst2UI	CCWGG	4 cut(s)	123, 138, 198, 1217
Bst4CI	ACNGT	7 cut(s)	380, 385, 547, 740, 758, 865, 1664
Bst6I	CTCTTC	2 cut(s)	1296, 1863
BstACI	GRCGYC	1 cut(s)	241
BstAUI	TGTACA	2 cut(s)	1659, 1964
BstBAI	YACGTR	1 cut(s)	842
BstC8I	GCNNGC	5 cut(s)	907, 1733, 1856, 1931, 1956
BstDEI	CTNAG	5 cut(s)	323, 521, 920, 1581, 1617
BstENI	CCTNNNNNAGG	1 cut(s)	263
BstF5I	GGATG	3 cut(s)	1314, 1567, 1842
BstFNI	CGCG	2 cut(s)	428, 1731
BstMAI	GTCTC	4 cut(s)	26, 877, 931, 988
BstMWI	GCNNNNNNNGC	1 cut(s)	1438
BstNI	CCWGG	4 cut(s)	123, 138, 198, 1217
BstNSI	RCATGY	4 cut(s)	130, 1330, 1612, 1897
BstSCI	CCNGG	4 cut(s)	121, 136, 196, 1215
BstSFI	CTRYAG	2 cut(s)	376, 490
BstUI	CGCG	2 cut(s)	428, 1731
BstV1I	GCAGC	4 cut(s)	402, 643, 1072, 1790
BstV2I	GAAGAC	3 cut(s)	369, 523, 759
BstX2I	RGATCY	3 cut(s)	433, 773, 1795
BstXI	CCANNNNNNTGG	1 cut(s)	167
BstYI	RGATCY	3 cut(s)	433, 773, 1795
BsuRI	GGCC	6 cut(s)	136, 526, 954, 1854, 1888, 2008
BtgZI	GCGATG	1 cut(s)	355
BtsCI	GGATG	3 cut(s)	1314, 1567, 1842
BtsIMutI	CAGTG	2 cut(s)	763, 861
BveI	ACCTGC	1 cut(s)	318
Cac8I	GCNNGC	5 cut(s)	907, 1733, 1856, 1931, 1956
CaiI	CAGNNNCTG	1 cut(s)	770
CciI	TCATGA	1 cut(s)	1012
Cfr10I	RCCGGY	1 cut(s)	720
Cfr13I	GGNCC	2 cut(s)	200, 2006
CseI	GACGC	1 cut(s)	249
CsiI	ACCWGGT	1 cut(s)	196
Csp6I	GTAC	6 cut(s)	331, 381, 553, 887, 1660, 1965
CviQI	GTAC	6 cut(s)	331, 381, 553, 887, 1660, 1965
DdeI	CTNAG	5 cut(s)	323, 521, 920, 1581, 1617
DraI	TTTAAA	2 cut(s)	295, 1479
EaeI	YGGCCR	1 cut(s)	134
Eam1104I	CTCTTC	2 cut(s)	1296, 1863
EarI	CTCTTC	2 cut(s)	1296, 1863
Eco130I	CCWWGG	3 cut(s)	235, 259, 682
Eco24I	GRGCYC	2 cut(s)	234, 1216
Eco31I	GGTCTC	1 cut(s)	988
Eco32I	GATATC	2 cut(s)	100, 1903
Eco47I	GGWCC	1 cut(s)	200
EcoNI	CCTNNNNNAGG	1 cut(s)	263
EcoO109I	RGGNCCY	1 cut(s)	200
EcoRII	CCWGG	4 cut(s)	121, 136, 196, 1215
EcoRV	GATATC	2 cut(s)	100, 1903
EcoT14I	CCWWGG	3 cut(s)	235, 259, 682
EcoT22I	ATGCAT	2 cut(s)	539, 1844
EcoT38I	GRGCYC	2 cut(s)	234, 1216
ErhI	CCWWGG	3 cut(s)	235, 259, 682
FalI	AAGNNNNNCTT	4 cut(s)	1416, 1448, 1918, 1950
FaqI	GGGAC	4 cut(s)	785, 1059, 1179, 1609
FauI	CCCGC	1 cut(s)	421
FauNDI	CATATG	1 cut(s)	1260
FbaI	TGATCA	1 cut(s)	1980
Fnu4HI	GCNGC	4 cut(s)	416, 657, 1086, 1779
FokI	GGATG	3 cut(s)	1321, 1574, 1829
FriOI	GRGCYC	2 cut(s)	234, 1216
Fsp4HI	GCNGC	4 cut(s)	416, 657, 1086, 1779
GluI	GCNGC	4 cut(s)	416, 657, 1086, 1779
GsuI	CTGGAG	3 cut(s)	105, 1238, 1435
HaeIII	GGCC	6 cut(s)	136, 526, 954, 1854, 1888, 2008
HapII	CCGG	3 cut(s)	60, 103, 721
HgaI	GACGC	1 cut(s)	249
Hin1I	GRCGYC	1 cut(s)	241
HincII	GTYRAC	1 cut(s)	1917
HindII	GTYRAC	1 cut(s)	1917
HpaII	CCGG	3 cut(s)	60, 103, 721
HphI	GGTGA	8 cut(s)	16, 186, 275, 331, 1133, 1171, 1310, 1605
Hpy166II	GTNNAC	4 cut(s)	157, 736, 1660, 1917
Hpy188I	TCNGA	8 cut(s)	81, 94, 699, 1105, 1204, 1528, 1654, 1900
Hpy188III	TCNNGA	7 cut(s)	103, 771, 792, 974, 1013, 1343, 1452
Hpy8I	GTNNAC	4 cut(s)	157, 736, 1660, 1917
Hpy99I	CGWCG	1 cut(s)	488
HpyAV	CCTTC	5 cut(s)	603, 927, 1118, 1406, 1867
HpyCH4III	ACNGT	7 cut(s)	380, 385, 547, 740, 758, 865, 1664
HpyCH4IV	ACGT	2 cut(s)	841, 1396
HpyCH4V	TGCA	8 cut(s)	250, 537, 602, 651, 1290, 1441, 1778, 1842
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1438
HpyF3I	CTNAG	5 cut(s)	323, 521, 920, 1581, 1617
HpySE526I	ACGT	2 cut(s)	841, 1396
Hsp92I	GRCGYC	1 cut(s)	241
Kpn2I	TCCGGA	1 cut(s)	102
Ksp22I	TGATCA	1 cut(s)	1980
LmnI	GCTCC	2 cut(s)	229, 1211
Lsp1109I	GCAGC	4 cut(s)	402, 643, 1072, 1790
LweI	GCATC	5 cut(s)	707, 1299, 1668, 1829, 1851
MabI	ACCWGGT	1 cut(s)	196
MaeII	ACGT	2 cut(s)	841, 1396
MaeIII	GTNAC	5 cut(s)	180, 316, 674, 1159, 1611
MboII	GAAGA	8 cut(s)	374, 528, 761, 764, 936, 1195, 1313, 1880
MfeI	CAATTG	2 cut(s)	245, 1829
MflI	RGATCY	3 cut(s)	433, 773, 1795
MhlI	GDGCHC	3 cut(s)	234, 1216, 1737
MluCI	AATT	9 cut(s)	30, 245, 743, 978, 1198, 1232, 1407, 1810, 1829
MlyI	GAGTC	4 cut(s)	50, 297, 359, 1425
MmeI	TCCRAC	5 cut(s)	33, 644, 1279, 1823, 1878
Mph1103I	ATGCAT	2 cut(s)	539, 1844
MroI	TCCGGA	1 cut(s)	102
MseI	TTAA	6 cut(s)	294, 1224, 1478, 1550, 1835, 2059
MslI	CAYNNNNRTG	5 cut(s)	165, 827, 844, 1017, 1910
MspA1I	CMGCKG	1 cut(s)	565
MspI	CCGG	3 cut(s)	60, 103, 721
MspR9I	CCNGG	4 cut(s)	123, 138, 198, 1217
MunI	CAATTG	2 cut(s)	245, 1829
Mva1269I	GAATGC	1 cut(s)	1290
MvaI	CCWGG	4 cut(s)	123, 138, 198, 1217
MvnI	CGCG	2 cut(s)	428, 1731
MwoI	GCNNNNNNNGC	1 cut(s)	1438
NdeI	CATATG	1 cut(s)	1260
NlaIV	GGNNCC	7 cut(s)	64, 231, 308, 509, 1213, 1797, 2007
NmuCI	GTSAC	4 cut(s)	180, 674, 1159, 1611
NsiI	ATGCAT	2 cut(s)	539, 1844
NspI	RCATGY	4 cut(s)	130, 1330, 1612, 1897
OliI	CACNNNNGTG	1 cut(s)	844
PagI	TCATGA	1 cut(s)	1012
PciI	ACATGT	2 cut(s)	1608, 1893
PcsI	WCGNNNNNNNCGW	1 cut(s)	1728
PctI	GAATGC	1 cut(s)	1290
PfeI	GAWTC	6 cut(s)	809, 832, 1361, 1465, 1513, 1521
PkrI	GCNGC	4 cut(s)	417, 658, 1087, 1780
PleI	GAGTC	4 cut(s)	50, 296, 359, 1424
PpsI	GAGTC	4 cut(s)	50, 296, 359, 1424
Ppu21I	YACGTR	1 cut(s)	842
PpuMI	RGGWCCY	1 cut(s)	200
PscI	ACATGT	2 cut(s)	1608, 1893
Psp1406I	AACGTT	1 cut(s)	1396
Psp5II	RGGWCCY	1 cut(s)	200
Psp6I	CCWGG	4 cut(s)	121, 136, 196, 1215
PspGI	CCWGG	4 cut(s)	121, 136, 196, 1215
PspN4I	GGNNCC	7 cut(s)	64, 231, 308, 509, 1213, 1797, 2007
PspPI	GGNCC	2 cut(s)	200, 2006
PspPPI	RGGWCCY	1 cut(s)	200
PstNI	CAGNNNCTG	1 cut(s)	770
PsuI	RGATCY	3 cut(s)	433, 773, 1795
PvuII	CAGCTG	1 cut(s)	565
RsaI	GTAC	6 cut(s)	332, 382, 554, 888, 1661, 1966
RsaNI	GTAC	6 cut(s)	331, 381, 553, 887, 1660, 1965
RseI	CAYNNNNRTG	5 cut(s)	165, 827, 844, 1017, 1910
SaqAI	TTAA	6 cut(s)	294, 1224, 1478, 1550, 1835, 2059
SatI	GCNGC	4 cut(s)	416, 657, 1086, 1779
Sau96I	GGNCC	2 cut(s)	200, 2006
ScaI	AGTACT	1 cut(s)	382
SchI	GAGTC	4 cut(s)	50, 297, 359, 1425
ScrFI	CCNGG	4 cut(s)	123, 138, 198, 1217
SduI	GDGCHC	3 cut(s)	234, 1216, 1737
SexAI	ACCWGGT	1 cut(s)	196
SfaNI	GCATC	5 cut(s)	707, 1299, 1668, 1829, 1851
SfcI	CTRYAG	2 cut(s)	376, 490
SinI	GGWCC	1 cut(s)	200
SmiMI	CAYNNNNRTG	5 cut(s)	165, 827, 844, 1017, 1910
SmlI	CTYRAG	1 cut(s)	1422
SmoI	CTYRAG	1 cut(s)	1422
SpeI	ACTAGT	2 cut(s)	889, 940
Sse9I	AATT	9 cut(s)	30, 245, 743, 978, 1198, 1232, 1407, 1810, 1829
SsiI	CCGC	1 cut(s)	428
SspI	AATATT	2 cut(s)	1492, 1689
StyD4I	CCNGG	4 cut(s)	121, 136, 196, 1215
StyI	CCWWGG	3 cut(s)	235, 259, 682
TaaI	ACNGT	7 cut(s)	380, 385, 547, 740, 758, 865, 1664
TaiI	ACGT	2 cut(s)	844, 1399
TaqI	TCGA	3 cut(s)	715, 1500, 1746
TasI	AATT	9 cut(s)	30, 245, 743, 978, 1198, 1232, 1407, 1810, 1829
TatI	WGTACW	3 cut(s)	380, 1659, 1964
TfiI	GAWTC	6 cut(s)	809, 832, 1361, 1465, 1513, 1521
Tru1I	TTAA	6 cut(s)	294, 1224, 1478, 1550, 1835, 2059
Tru9I	TTAA	6 cut(s)	294, 1224, 1478, 1550, 1835, 2059
TscAI	CASTG	2 cut(s)	763, 868
TseFI	GTSAC	4 cut(s)	180, 674, 1159, 1611
TseI	GCWGC	4 cut(s)	415, 656, 1085, 1778
Tsp45I	GTSAC	4 cut(s)	180, 674, 1159, 1611
TspRI	CASTG	2 cut(s)	763, 868
VpaK11BI	GGWCC	1 cut(s)	200
XagI	CCTNNNNNAGG	1 cut(s)	263
XapI	RAATTY	3 cut(s)	978, 1198, 1810
XceI	RCATGY	4 cut(s)	130, 1330, 1612, 1897
XcmI	CCANNNNNNNNNTGG	1 cut(s)	843
XmaJI	CCTAGG	1 cut(s)	259
ZrmI	AGTACT	1 cut(s)	382
Zsp2I	ATGCAT	2 cut(s)	539, 1844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.