Rmu_sc0004107.1_g000006

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004107.1
OG0000096
Physical Location & Seq
Forward (+)
38687 .. 40428
1742 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004107.1_g000006.1.cds

Sequence Viewer

Length: 1563 bp
atgatcaacttattgtgtttgctcatcagcttctggacttgtcatggtgcagctgcactgttcattggagacacgcttaatccaggggaggccctcaattcctcgagctttatggtctccgcttcgggggagtttacgttgggtttcaactccggctacctcattctgaggtgcaagaactatacggtttgggttgccaacctgcacactccgatttcagacccttcgtcggcgcttctcaccttggacaagaacagaactgtcctgcaaattaccctgaaaggcaagaatcccatcgttctttactccccttctcatgataatagtaccaataatgttgtggctaccctgttagattctggcaatttagtcctacgagaggtcaatcagaacgtttcaaactctccgttgtggcaaagctttgatggtcctaatgtggctcttaggccggggatgaaattaggttttgatgctggtctaagtataactagcaacagtatgtcgatttggagttggcaggaaaatcagaacagcccggggccagggtctttcagcctttattgggattccggcacacgccaattgcaagttaggagaaacggggatctttggtggactagcgaaacattgagaagtggaagatacgagtatgctaatttccgtaatatatccaaggtctacaattttagcgtggtttcatatgagaatggagactacttcagttacactgtcgttggtgatccaaatggcagatcagcctgggtgctagacacaggtggggagctttatgatgttaactataacatttctattgggtcagcaggtgactgtgatggctataattatcacaccacctatagctctgtcgatggctataactccgttggtgggacgtgccagagatggagcggccgggccactctttattgtcctgtggcaacatcctctggtgcatttattcagccgactgaaaggcgctcctttagaccgatcagtatgaacatgtctatcaattcaacatgggaggagacaaattcaagtcgatatgggatttatgaatgcatggctacttgttggatggactgtgactgccttggttttgaatttctctttgataatcagactggatgtcgattatggagtgtaaagtattctcaggtccttgaagatccggatagttctgcaactaaatatattataccaggactagtccctacgtataaaccgcaatctcgaagaaacataattgatgcatcacataagtggatatggattggtattgcaattgcggctgttcttctggcgctggtgctttgcagcatctgctacctaatacgaaaaagaaaacttgcaggtgagaaccaaacaaatatccaggatatgctgaacagcatgaaatctaatagacctactgatgctaatgggcttcaaagtgatggaaagaggggacaagatttaagtgtatttagttatgcatctattacagctgccacttgcaacttctctaatgaaaataagctcggagaaggaggttttggacctgtttataagggaaggctttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr

Protein Analysis

520

Amino Acids

57.58

Weight (kDa)

6.25

Isoelectric Point (pI)

41.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1548
AarI CACCTGC 2 cut(s) 812, 1343
Acc36I ACCTGC 3 cut(s) 210, 812, 1343
AccBSI CCGCTC 1 cut(s) 909
AccI GTMKAC 1 cut(s) 678
AccIII TCCGGA 1 cut(s) 1171
AciI CCGC 4 cut(s) 120, 909, 1226, 1289
AclI AACGTT 1 cut(s) 393
AclWI GGATC 3 cut(s) 612, 734, 1163
AcoI YGGCCR 1 cut(s) 910
AcsI RAATTY 2 cut(s) 1033, 1103
AcuI CTGAAG 1 cut(s) 703
AfaI GTAC 1 cut(s) 328
AfiI CCNNNNNNNGG 6 cut(s) 126, 229, 379, 542, 562, 888
AflIII ACRYGT 1 cut(s) 1002
AgsI TTSAA 7 cut(s) 148, 399, 1017, 1038, 1103, 1166, 1430
AhdI GACNNNNNGTC 2 cut(s) 226, 1128
AhlI ACTAGT 1 cut(s) 1207
AjiI CACGTC 1 cut(s) 894
AjnI CCWGG 5 cut(s) 82, 541, 758, 1201, 1374
AjuI GAANNNNNNNTTGG 2 cut(s) 1518, 1550
AleI CACNNNNGTG 1 cut(s) 1261
AluBI AGCT 8 cut(s) 30, 53, 108, 420, 784, 861, 1487, 1519
AluI AGCT 8 cut(s) 30, 53, 108, 420, 784, 861, 1487, 1519
Alw26I GTCTC 4 cut(s) 63, 121, 705, 1022
AlwI GGATC 3 cut(s) 612, 734, 1163
AlwNI CAGNNNCTG 2 cut(s) 33, 1323
Ama87I CYCGRG 2 cut(s) 103, 535
Aor13HI TCCGGA 1 cut(s) 1171
AoxI GGCC 5 cut(s) 90, 446, 539, 910, 915
ApeKI GCWGC 4 cut(s) 50, 53, 1317, 1487
ApoI RAATTY 2 cut(s) 1033, 1103
AspLEI GCGC 3 cut(s) 235, 978, 1306
AspS9I GGNCC 6 cut(s) 91, 428, 539, 915, 1159, 1538
AsuC2I CCSGG 4 cut(s) 450, 536, 537, 914
AsuHPI GGTGA 4 cut(s) 232, 749, 836, 1367
AvaI CYCGRG 2 cut(s) 103, 535
AvaII GGWCC 3 cut(s) 428, 1159, 1538
BbvI GCAGC 4 cut(s) 40, 62, 1329, 1474
BccI CCATC 7 cut(s) 302, 419, 827, 863, 897, 1072, 1430
BciT130I CCWGG 5 cut(s) 84, 543, 760, 1203, 1376
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 4 cut(s) 450, 536, 537, 914
BcoDI GTCTC 4 cut(s) 63, 121, 705, 1022
BcuI ACTAGT 1 cut(s) 1207
BfaI CTAG 4 cut(s) 489, 618, 767, 1208
BfmI CTRYAG 1 cut(s) 856
BfoI RGCGCY 3 cut(s) 236, 979, 1307
BfuAI ACCTGC 3 cut(s) 210, 812, 1343
BisI GCNGC 6 cut(s) 51, 54, 910, 1290, 1318, 1488
BlsI GCNGC 6 cut(s) 52, 55, 911, 1291, 1319, 1489
Bme1390I CCNGG 9 cut(s) 84, 450, 536, 537, 543, 760, 914, 1203, 1376
Bme18I GGWCC 3 cut(s) 428, 1159, 1538
BmeRI GACNNNNNGTC 2 cut(s) 226, 1128
BmeT110I CYCGRG 2 cut(s) 103, 535
BmgBI CACGTC 1 cut(s) 894
BmgT120I GGNCC 6 cut(s) 91, 428, 539, 915, 1159, 1538
BmiI GGNNCC 1 cut(s) 540
BmrFI CCNGG 9 cut(s) 84, 450, 536, 537, 543, 760, 914, 1203, 1376
BmsI GCATC 6 cut(s) 460, 1240, 1262, 1329, 1405, 1484
BpuMI CCSGG 4 cut(s) 450, 536, 537, 914
BsaAI YACGTR 1 cut(s) 1218
BsaI GGTCTC 1 cut(s) 121
BsaJI CCNNGG 9 cut(s) 83, 243, 449, 535, 536, 542, 672, 759, 1093
BsaWI WCCGGW 1 cut(s) 1171
BsaXI ACNNNNNCTCC 2 cut(s) 122, 152
Bsc4I CCNNNNNNNGG 6 cut(s) 126, 229, 379, 542, 562, 888
Bse1I ACTGG 1 cut(s) 1129
BseAI TCCGGA 1 cut(s) 1171
BseBI CCWGG 5 cut(s) 84, 543, 760, 1203, 1376
BseDI CCNNGG 9 cut(s) 83, 243, 449, 535, 536, 542, 672, 759, 1093
BseGI GGATG 4 cut(s) 459, 941, 1083, 1133
BseLI CCNNNNNNNGG 6 cut(s) 126, 229, 379, 542, 562, 888
BseMII CTCAG 2 cut(s) 158, 1169
BseNI ACTGG 1 cut(s) 1129
BseRI GAGGAG 1 cut(s) 1040
BseX3I CGGCCG 1 cut(s) 910
BseXI GCAGC 4 cut(s) 40, 62, 1329, 1474
BsgI GTGCAG 3 cut(s) 39, 69, 188
Bsh1285I CGRYCG 1 cut(s) 913
BshFI GGCC 5 cut(s) 92, 448, 541, 912, 917
BsiEI CGRYCG 1 cut(s) 913
BsiHKCI CYCGRG 2 cut(s) 103, 535
BsiSI CCGG 6 cut(s) 153, 449, 536, 570, 913, 1172
BslFI GGGAC 3 cut(s) 904, 1196, 1461
BslI CCNNNNNNNGG 6 cut(s) 126, 229, 379, 542, 562, 888
BsmAI GTCTC 4 cut(s) 63, 121, 705, 1022
BsmFI GGGAC 3 cut(s) 904, 1196, 1461
BsmI GAATGC 1 cut(s) 1064
BsnI GGCC 5 cut(s) 92, 448, 541, 912, 917
Bso31I GGTCTC 1 cut(s) 121
BsoBI CYCGRG 2 cut(s) 103, 535
Bsp13I TCCGGA 1 cut(s) 1171
Bsp143I GATC 6 cut(s) 3, 604, 739, 752, 990, 1168
BspACI CCGC 4 cut(s) 120, 909, 1226, 1289
BspANI GGCC 5 cut(s) 92, 448, 541, 912, 917
BspCNI CTCAG 2 cut(s) 159, 1168
BspEI TCCGGA 1 cut(s) 1171
BspHI TCATGA 1 cut(s) 316
BspLI GGNNCC 1 cut(s) 540
BspMI ACCTGC 3 cut(s) 210, 812, 1343
BspPI GGATC 3 cut(s) 612, 734, 1163
BspTNI GGTCTC 1 cut(s) 121
BsrBI CCGCTC 1 cut(s) 909
BsrI ACTGG 1 cut(s) 1129
BssECI CCNNGG 9 cut(s) 83, 243, 449, 535, 536, 542, 672, 759, 1093
BssMI GATC 6 cut(s) 3, 604, 739, 752, 990, 1168
BssT1I CCWWGG 3 cut(s) 243, 672, 1093
Bst2UI CCWGG 5 cut(s) 84, 543, 760, 1203, 1376
Bst4CI ACNGT 7 cut(s) 60, 187, 262, 497, 730, 830, 1085
BstAPI GCANNNNNTGC 1 cut(s) 1323
BstBAI YACGTR 1 cut(s) 1218
BstDEI CTNAG 4 cut(s) 167, 443, 479, 1155
BstENI CCTNNNNNAGG 1 cut(s) 377
BstF5I GGATG 4 cut(s) 459, 941, 1083, 1133
BstH2I RGCGCY 3 cut(s) 236, 979, 1307
BstHHI GCGC 3 cut(s) 235, 978, 1306
BstKTI GATC 6 cut(s) 6, 607, 742, 755, 993, 1171
BstMAI GTCTC 4 cut(s) 63, 121, 705, 1022
BstMBI GATC 6 cut(s) 3, 604, 739, 752, 990, 1168
BstMCI CGRYCG 1 cut(s) 913
BstMWI GCNNNNNNNGC 2 cut(s) 1289, 1323
BstNI CCWGG 5 cut(s) 84, 543, 760, 1203, 1376
BstNSI RCATGY 1 cut(s) 1006
BstSCI CCNGG 9 cut(s) 82, 448, 534, 535, 541, 758, 912, 1201, 1374
BstSFI CTRYAG 1 cut(s) 856
BstSNI TACGTA 1 cut(s) 1218
BstV1I GCAGC 4 cut(s) 40, 62, 1329, 1474
BstX2I RGATCY 2 cut(s) 604, 1168
BstYI RGATCY 2 cut(s) 604, 1168
BstZI CGGCCG 1 cut(s) 910
BsuRI GGCC 5 cut(s) 92, 448, 541, 912, 917
BtrI CACGTC 1 cut(s) 894
BtsCI GGATG 4 cut(s) 459, 941, 1083, 1133
BtsIMutI CAGTG 2 cut(s) 56, 726
BveI ACCTGC 3 cut(s) 210, 812, 1343
CaiI CAGNNNCTG 2 cut(s) 33, 1323
CciI TCATGA 1 cut(s) 316
CfoI GCGC 3 cut(s) 235, 978, 1306
Cfr13I GGNCC 6 cut(s) 91, 428, 539, 915, 1159, 1538
Cfr9I CCCGGG 1 cut(s) 535
Csp6I GTAC 1 cut(s) 327
CviAII CATG 6 cut(s) 44, 317, 1003, 1020, 1063, 1393
CviQI GTAC 1 cut(s) 327
DdeI CTNAG 4 cut(s) 167, 443, 479, 1155
DpnI GATC 6 cut(s) 5, 606, 741, 754, 992, 1170
DpnII GATC 6 cut(s) 3, 604, 739, 752, 990, 1168
DriI GACNNNNNGTC 2 cut(s) 226, 1128
EaeI YGGCCR 1 cut(s) 910
EagI CGGCCG 1 cut(s) 910
Eam1105I GACNNNNNGTC 2 cut(s) 226, 1128
EclXI CGGCCG 1 cut(s) 910
Eco105I TACGTA 1 cut(s) 1218
Eco130I CCWWGG 3 cut(s) 243, 672, 1093
Eco31I GGTCTC 1 cut(s) 121
Eco47I GGWCC 3 cut(s) 428, 1159, 1538
Eco52I CGGCCG 1 cut(s) 910
Eco57I CTGAAG 1 cut(s) 703
Eco88I CYCGRG 2 cut(s) 103, 535
EcoNI CCTNNNNNAGG 1 cut(s) 377
EcoO109I RGGNCCY 2 cut(s) 91, 1159
EcoRII CCWGG 5 cut(s) 82, 541, 758, 1201, 1374
EcoT14I CCWWGG 3 cut(s) 243, 672, 1093
EcoT22I ATGCAT 3 cut(s) 1064, 1255, 1477
ErhI CCWWGG 3 cut(s) 243, 672, 1093
FaeI CATG 6 cut(s) 47, 320, 1006, 1023, 1066, 1396
FaqI GGGAC 3 cut(s) 904, 1196, 1461
FatI CATG 6 cut(s) 43, 316, 1002, 1019, 1062, 1392
FauNDI CATATG 1 cut(s) 700
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 678
Fnu4HI GCNGC 6 cut(s) 51, 54, 910, 1290, 1318, 1488
FokI GGATG 4 cut(s) 466, 928, 1090, 1140
Fsp4HI GCNGC 6 cut(s) 51, 54, 910, 1290, 1318, 1488
FspBI CTAG 4 cut(s) 489, 618, 767, 1208
GlaI GCGC 3 cut(s) 234, 977, 1305
GluI GCNGC 6 cut(s) 51, 54, 910, 1290, 1318, 1488
HaeII RGCGCY 3 cut(s) 236, 979, 1307
HaeIII GGCC 5 cut(s) 92, 448, 541, 912, 917
HapII CCGG 6 cut(s) 153, 449, 536, 570, 913, 1172
HhaI GCGC 3 cut(s) 235, 978, 1306
Hin1II CATG 6 cut(s) 47, 320, 1006, 1023, 1066, 1396
Hin6I GCGC 3 cut(s) 233, 976, 1304
HinP1I GCGC 3 cut(s) 233, 976, 1304
HincII GTYRAC 1 cut(s) 796
HindII GTYRAC 1 cut(s) 796
HindIII AAGCTT 1 cut(s) 418
HinfI GANTC 3 cut(s) 289, 356, 566
HpaI GTTAAC 1 cut(s) 796
HpaII CCGG 6 cut(s) 153, 449, 536, 570, 913, 1172
HphI GGTGA 4 cut(s) 232, 749, 836, 1367
Hpy166II GTNNAC 4 cut(s) 135, 615, 679, 796
Hpy188I TCNGA 7 cut(s) 168, 213, 220, 390, 528, 1122, 1523
Hpy188III TCNNGA 4 cut(s) 34, 317, 1172, 1233
Hpy8I GTNNAC 4 cut(s) 135, 615, 679, 796
Hpy99I CGWCG 1 cut(s) 232
HpyAV CCTTC 4 cut(s) 234, 321, 1520, 1548
HpyCH4III ACNGT 7 cut(s) 60, 187, 262, 497, 730, 830, 1085
HpyCH4IV ACGT 4 cut(s) 137, 393, 893, 1217
HpyF10VI GCNNNNNNNGC 2 cut(s) 1289, 1323
HpyF3I CTNAG 4 cut(s) 167, 443, 479, 1155
HpySE526I ACGT 4 cut(s) 137, 393, 893, 1217
Hsp92II CATG 6 cut(s) 47, 320, 1006, 1023, 1066, 1396
HspAI GCGC 3 cut(s) 233, 976, 1304
Kpn2I TCCGGA 1 cut(s) 1171
Ksp22I TGATCA 1 cut(s) 3
KspAI GTTAAC 1 cut(s) 796
Kzo9I GATC 6 cut(s) 3, 604, 739, 752, 990, 1168
LmnI GCTCC 3 cut(s) 781, 906, 983
Lsp1109I GCAGC 4 cut(s) 40, 62, 1329, 1474
LweI GCATC 6 cut(s) 460, 1240, 1262, 1329, 1405, 1484
MaeI CTAG 4 cut(s) 489, 618, 767, 1208
MaeII ACGT 4 cut(s) 137, 393, 893, 1217
MaeIII GTNAC 3 cut(s) 722, 824, 1085
MalI GATC 6 cut(s) 5, 606, 741, 754, 992, 1170
MbiI CCGCTC 1 cut(s) 909
MboI GATC 6 cut(s) 3, 604, 739, 752, 990, 1168
MboII GAAGA 4 cut(s) 651, 1178, 1248, 1289
MfeI CAATTG 2 cut(s) 581, 1284
MflI RGATCY 2 cut(s) 604, 1168
MmeI TCCRAC 1 cut(s) 1055
Mph1103I ATGCAT 3 cut(s) 1064, 1255, 1477
MroI TCCGGA 1 cut(s) 1171
MseI TTAA 3 cut(s) 78, 795, 1457
MslI CAYNNNNRTG 1 cut(s) 1261
MspA1I CMGCKG 2 cut(s) 53, 1487
MspI CCGG 6 cut(s) 153, 449, 536, 570, 913, 1172
MspR9I CCNGG 9 cut(s) 84, 450, 536, 537, 543, 760, 914, 1203, 1376
MunI CAATTG 2 cut(s) 581, 1284
Mva1269I GAATGC 1 cut(s) 1064
MvaI CCWGG 5 cut(s) 84, 543, 760, 1203, 1376
MwoI GCNNNNNNNGC 2 cut(s) 1289, 1323
NciI CCSGG 4 cut(s) 450, 536, 537, 914
NdeI CATATG 1 cut(s) 700
NdeII GATC 6 cut(s) 3, 604, 739, 752, 990, 1168
NlaIII CATG 6 cut(s) 47, 320, 1006, 1023, 1066, 1396
NlaIV GGNNCC 1 cut(s) 540
NmuCI GTSAC 2 cut(s) 824, 1085
NsiI ATGCAT 3 cut(s) 1064, 1255, 1477
NspI RCATGY 1 cut(s) 1006
OliI CACNNNNGTG 1 cut(s) 1261
PaeR7I CTCGAG 1 cut(s) 103
PagI TCATGA 1 cut(s) 316
PaqCI CACCTGC 2 cut(s) 812, 1343
PciI ACATGT 1 cut(s) 1002
PctI GAATGC 1 cut(s) 1064
PfeI GAWTC 3 cut(s) 289, 356, 566
PfoI TCCNGGA 1 cut(s) 1374
PkrI GCNGC 6 cut(s) 52, 55, 911, 1291, 1319, 1489
Ppu21I YACGTR 1 cut(s) 1218
PpuMI RGGWCCY 1 cut(s) 1159
PscI ACATGT 1 cut(s) 1002
PsiI TTATAA 1 cut(s) 1548
Psp1406I AACGTT 1 cut(s) 393
Psp5II RGGWCCY 1 cut(s) 1159
Psp6I CCWGG 5 cut(s) 82, 541, 758, 1201, 1374
PspGI CCWGG 5 cut(s) 82, 541, 758, 1201, 1374
PspN4I GGNNCC 1 cut(s) 540
PspPI GGNCC 6 cut(s) 91, 428, 539, 915, 1159, 1538
PspPPI RGGWCCY 1 cut(s) 1159
PspXI VCTCGAGB 1 cut(s) 103
PstNI CAGNNNCTG 2 cut(s) 33, 1323
PsuI RGATCY 2 cut(s) 604, 1168
PvuII CAGCTG 2 cut(s) 53, 1487
RsaI GTAC 1 cut(s) 328
RsaNI GTAC 1 cut(s) 327
RseI CAYNNNNRTG 1 cut(s) 1261
SaqAI TTAA 3 cut(s) 78, 795, 1457
SatI GCNGC 6 cut(s) 51, 54, 910, 1290, 1318, 1488
Sau3AI GATC 6 cut(s) 3, 604, 739, 752, 990, 1168
Sau96I GGNCC 6 cut(s) 91, 428, 539, 915, 1159, 1538
ScrFI CCNGG 9 cut(s) 84, 450, 536, 537, 543, 760, 914, 1203, 1376
SfaNI GCATC 6 cut(s) 460, 1240, 1262, 1329, 1405, 1484
SfcI CTRYAG 1 cut(s) 856
Sfr274I CTCGAG 1 cut(s) 103
SinI GGWCC 3 cut(s) 428, 1159, 1538
SlaI CTCGAG 1 cut(s) 103
SmaI CCCGGG 1 cut(s) 537
SmiMI CAYNNNNRTG 1 cut(s) 1261
SmlI CTYRAG 1 cut(s) 103
SmoI CTYRAG 1 cut(s) 103
SnaBI TACGTA 1 cut(s) 1218
SpeI ACTAGT 1 cut(s) 1207
SsiI CCGC 4 cut(s) 120, 909, 1226, 1289
SspMI CTAG 4 cut(s) 489, 618, 767, 1208
StyD4I CCNGG 9 cut(s) 82, 448, 534, 535, 541, 758, 912, 1201, 1374
StyI CCWWGG 3 cut(s) 243, 672, 1093
TaaI ACNGT 7 cut(s) 60, 187, 262, 497, 730, 830, 1085
TaiI ACGT 4 cut(s) 140, 396, 896, 1220
TaqI TCGA 6 cut(s) 104, 503, 867, 1042, 1132, 1234
TaqII GACCGA 1 cut(s) 1003
TauI GCSGC 2 cut(s) 912, 1292
TfiI GAWTC 3 cut(s) 289, 356, 566
Tru1I TTAA 3 cut(s) 78, 795, 1457
Tru9I TTAA 3 cut(s) 78, 795, 1457
TscAI CASTG 2 cut(s) 63, 733
TseFI GTSAC 2 cut(s) 824, 1085
TseI GCWGC 4 cut(s) 50, 53, 1317, 1487
Tsp45I GTSAC 2 cut(s) 824, 1085
TspDTI ATGAA 7 cut(s) 52, 470, 687, 1013, 1071, 1409, 1524
TspGWI ACGGA 3 cut(s) 396, 650, 871
TspMI CCCGGG 1 cut(s) 535
TspRI CASTG 2 cut(s) 63, 733
VpaK11BI GGWCC 3 cut(s) 428, 1159, 1538
XagI CCTNNNNNAGG 1 cut(s) 377
XapI RAATTY 2 cut(s) 1033, 1103
XceI RCATGY 1 cut(s) 1006
XcmI CCANNNNNNNNNTGG 1 cut(s) 337
XhoI CTCGAG 1 cut(s) 103
XmaI CCCGGG 1 cut(s) 535
XmiI GTMKAC 1 cut(s) 678
XspI CTAG 4 cut(s) 489, 618, 767, 1208
Zsp2I ATGCAT 3 cut(s) 1064, 1255, 1477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.