Rh5AG176800

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000096
Physical Location & Seq
Forward (+)
19734795 .. 19738507
3713 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG176800.1

Sequence Viewer

Length: 2382 bp
ATGGCTGGCGGTGTCGATTTGATTTGCTTGGTGTTTATGTGGAGCTTGTGGAGTGCTGCTTGTAATGGTGCAACAGACACACTGAAAACAGGTGAAAGTCTAAATTCTTCAAGCTTGTTAGTTTCTGCAAATGGGAAGTTCACTTTGAATTTTCGTGCTCATGAGCTTGATCCAAACCATAGCTACTTAGTTATATCGTGGAATGGGAGTCATAACTATGCGTGGGTTGCGAATAGAGAAGCATCCATTTTGTACCCTTCTGGAGCTCTTACATTGGACAGGAACAACACATTGAAGGTTACTCACAGAGATGGGGATGCCCTGGTGCTTTACTCTGCTGATTCGGAGACTATCAGTGGTGATGCTGTGGCTACTCTTATGGATGATGGGAATTTTGTGCTGCAAGAAGTGAGCTCTGATGGATCGGCGAAGAGGGTTTTGTGGCAGAGTTTTGATTATCCTGGAGATGTGCTTCTGCCAGGTATGAAATTAGGGGTTAACCGTAGTAGTGGCCGCAATTGGTCACTGTCGTGCTGGTTTACTGAGAGAAGTGCGGTGCCAGGACCTTTCACTCTTGAATGGGACCCTGATGGACACGACTTGAAAATTAAGCGGCGTGGGGTGGTGTATTGGAGTAGTGGAGTGTTCCGAGATGGGAGTTTTGAAAATATTAAGGAGAAGAGGTATAAGTTTAGCATTGTTTCAAAGAAGAATGAAGACTATTTCAGTTACACTACTTTAGATGAAAAAGCTGTATCAGAGTGGCTGCTAACCACAATAGGGCGACTAAAAGACTTTGATGAATCAATTGATATCGCAAAAGCAGATTCCTGTTATGGGTATAACACTGAAGGTGGATGCCAGATTTGGGACCAGCCAAAGTGTCGGCGTTCTAGTGCTGAATTTGAGCAACAAAATGGTTACTTTAATCCAACAGGTGCTAGCGGCACTACTGCAACATCAACAAGTGATTCAAATATAAGTCTCAGTATTAGTGACTGTAAGGCTGCTTGTTGGGCAGATTGTAACTGTATTGGATACCTATTTCTGTTTCCTAATCAGACTGGATGTCGGTATTGGACTGGAAACTTGAAATTCATTGCAGACAGCATAAGTTATGATTCAAATGTTGTATATGTTTTAACAACAAAGTCAGTCGACAGCAGTGATGCATCACGTAAGTGGATATGGATTGGTATTGCACTTGTCGCTGTTCTTCTGGCAATGGTGCTTTGTAGTATGTGCTACCTACTACGAAGAAGAAAACTTGCAGGTGAGAACCAAAGAAATGTCCAGGATATGCTGAACATGATAAACTCTAATAGACCTACAAATGCTACTGGACTTCAAAATGATGGAAAGGGGGGACATGATTTAAGGGTATTTAAGTATCCATCTATCATAGCCGCCACCTGCAACTTCTCTGATGAAAATAAGCTAGGAGAAGGCGGTTTTGGACCTGTTTATAAGGGGAAATTGGTGACCGGACAAGAAGTGGCAGTGAAGAGGCTTTCAAAACTTTCAGGACAGGGAATATCGGAGTTTAAGAATGAGTTGATACTTATACATGAACTCCAGCATACAAACCTTGTTAAGCTCTTCGGATTTTGCATTCATGGTGAAGAGAGGATGTTGATATACGAGTACATGACAAACAAAAGCTTGGCCCACTTTTTATTTGATTCAACTAGATGCCAGCAGCTAGATTGGAACAAACGTTTCAACATAATTGAAGGAATTGCTCAAGGTTTGGTTTACTTGCACAAATATTCCAGAATGAGAGTAATTCATAGAGATTTGAAGGCAAGTAATGTTCTGCTTGATGAAAGGATGAATCCCAAAATTTCTGACTTTGGAATGGCAAGGATTTTCATGAATGATGAACAAGAAGCAAATACTATGAAGATTGTTGGGACACGTGGTTATATGTCCCCCGAGTATGTTATGGGGGGAAATTTTTCCACAAAATCGGATGTCTATAGTTTCGGAGTGTTAATGCTTGAAATCCTAAGTGGTAGGAGAAACAACAGCTTCCACAATGATGATCGCGCCTTCAACTTAGTTGCTTATGCATGGGAGTTATGGAAAGAAGGTGCAGGACTAGGATTAATGGATCCGACACTTGGTGATTCATTTGTTGAACATCAATCGTTGAGGTGTATCCATGTTGGTCTGCTCTGCGTGGAGGAAAATCCAGCTAGTCGACCCACGATGTTAGATGTGATACCTATGTTGACCAATGAAAGCATGTCTTTACCAGTTCCTACAAAACCAGCATTCTGTACAGAAAGAAATGTGATCACAGATGCTATAGGTGGAAGCGGATCGGAAACGGTTTCATCTATAAATACTATCTCCAATTCTGGTCTTGATGGGCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

793

Amino Acids

88.29

Weight (kDa)

5.91

Isoelectric Point (pI)

36.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 179 1.4e-24 D-mannose binding lectin
Pkinase PF00069 475 - 741 9.4e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 477 - 674 2.5e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1467
AarI CACCTGC 2 cut(s) 1262, 1421
Acc36I ACCTGC 2 cut(s) 1262, 1421
AccB1I GGYRCC 1 cut(s) 556
AccI GTMKAC 2 cut(s) 1158, 2203
AccII CGCG 1 cut(s) 2049
AciI CCGC 8 cut(s) 9, 514, 554, 613, 945, 1407, 1449, 2322
AclI AACGTT 1 cut(s) 1717
AclWI GGATC 5 cut(s) 164, 430, 2108, 2121, 2332
AcoI YGGCCR 1 cut(s) 511
AcsI RAATTY 7 cut(s) 103, 148, 391, 902, 1094, 1842, 1954
AcuI CTGAAG 1 cut(s) 870
AcvI CACGTG 1 cut(s) 1919
AdeI CACNNNGTG 1 cut(s) 2126
AfaI GTAC 3 cut(s) 254, 1646, 2284
AfiI CCNNNNNNNGG 4 cut(s) 780, 837, 868, 2123
AflIII ACRYGT 1 cut(s) 1916
AhdI GACNNNNNGTC 1 cut(s) 1068
AjnI CCWGG 5 cut(s) 321, 460, 478, 559, 1293
AjuI GAANNNNNNNTTGG 2 cut(s) 1437, 1469
AleI CACNNNNGTG 2 cut(s) 529, 1180
Alw21I GWGCWC 3 cut(s) 160, 268, 416
Alw26I GTCTC 2 cut(s) 341, 989
AlwI GGATC 5 cut(s) 164, 430, 2108, 2121, 2332
Ama87I CYCGRG 1 cut(s) 1934
AoxI GGCC 2 cut(s) 511, 1665
ApeKI GCWGC 5 cut(s) 56, 400, 766, 1007, 1699
ApoI RAATTY 7 cut(s) 103, 148, 391, 902, 1094, 1842, 1954
AseI ATTAAT 1 cut(s) 2108
Asp700I GAANNNNTTC 1 cut(s) 1957
AspLEI GCGC 1 cut(s) 2051
AspS9I GGNCC 5 cut(s) 563, 583, 871, 1457, 1666
AsuHPI GGTGA 6 cut(s) 104, 371, 1286, 1492, 1631, 2138
AsuNHI GCTAGC 1 cut(s) 941
AvaI CYCGRG 1 cut(s) 1934
AvaII GGWCC 4 cut(s) 563, 583, 871, 1457
BaeI ACNNNNGTAYC 2 cut(s) 2216, 2249
BamHI GGATCC 1 cut(s) 2113
BanI GGYRCC 1 cut(s) 556
BanII GRGCYC 2 cut(s) 268, 416
BbrPI CACGTG 1 cut(s) 1919
BbsI GAAGAC 1 cut(s) 723
Bbv12I GWGCWC 3 cut(s) 160, 268, 416
BbvI GCAGC 5 cut(s) 43, 387, 753, 994, 1711
BccI CCATC 8 cut(s) 305, 380, 413, 584, 647, 1349, 1402, 2366
BciT130I CCWGG 5 cut(s) 323, 462, 480, 561, 1295
BciVI GTATCC 3 cut(s) 1031, 1401, 2171
BclI TGATCA 1 cut(s) 2298
BcoDI GTCTC 2 cut(s) 341, 989
BfaI CTAG 7 cut(s) 894, 942, 1439, 1689, 1703, 2102, 2199
BfmI CTRYAG 2 cut(s) 1978, 2310
BfuAI ACCTGC 2 cut(s) 1262, 1421
BfuI GTATCC 3 cut(s) 1031, 1401, 2171
BisI GCNGC 9 cut(s) 57, 401, 514, 614, 767, 946, 1008, 1407, 1700
BlsI GCNGC 9 cut(s) 58, 402, 515, 615, 768, 947, 1009, 1408, 1701
Bme1390I CCNGG 5 cut(s) 323, 462, 480, 561, 1295
Bme18I GGWCC 4 cut(s) 563, 583, 871, 1457
BmeRI GACNNNNNGTC 1 cut(s) 1068
BmeT110I CYCGRG 1 cut(s) 1934
BmgT120I GGNCC 5 cut(s) 563, 583, 871, 1457, 1666
BmiI GGNNCC 5 cut(s) 558, 584, 585, 872, 2115
BmrFI CCNGG 5 cut(s) 323, 462, 480, 561, 1295
BmsI GCATC 8 cut(s) 251, 307, 352, 848, 1159, 1181, 1682, 2296
BmtI GCTAGC 1 cut(s) 945
BpiI GAAGAC 1 cut(s) 723
BpmI CTGGAG 3 cut(s) 282, 483, 1559
BpuEI CTTGAG 1 cut(s) 1728
BsaAI YACGTR 2 cut(s) 1178, 1919
BsaJI CCNNGG 1 cut(s) 321
BsaWI WCCGGW 1 cut(s) 1484
BsaXI ACNNNNNCTCC 4 cut(s) 668, 698, 1557, 1587
Bsc4I CCNNNNNNNGG 4 cut(s) 780, 837, 868, 2123
Bse1I ACTGG 4 cut(s) 1069, 1087, 1345, 2258
Bse3DI GCAATG 2 cut(s) 1098, 1230
BseBI CCWGG 5 cut(s) 323, 462, 480, 561, 1295
BseDI CCNNGG 1 cut(s) 321
BseGI GGATG 8 cut(s) 242, 322, 388, 863, 1073, 1635, 1836, 1978
BseLI CCNNNNNNNGG 4 cut(s) 780, 837, 868, 2123
BseMI GCAATG 2 cut(s) 1098, 1230
BseMII CTCAG 2 cut(s) 534, 1000
BseNI ACTGG 4 cut(s) 1069, 1087, 1345, 2258
BseXI GCAGC 5 cut(s) 43, 387, 753, 994, 1711
BsgI GTGCAG 1 cut(s) 2115
Bsh1236I CGCG 1 cut(s) 2049
BshFI GGCC 2 cut(s) 513, 1667
BshNI GGYRCC 1 cut(s) 556
BsiHKAI GWGCWC 3 cut(s) 160, 268, 416
BsiHKCI CYCGRG 1 cut(s) 1934
BsiSI CCGG 1 cut(s) 1485
BslFI GGGAC 5 cut(s) 596, 884, 1380, 1915, 1927
BslI CCNNNNNNNGG 4 cut(s) 780, 837, 868, 2123
BsmAI GTCTC 2 cut(s) 341, 989
BsmFI GGGAC 5 cut(s) 596, 884, 1380, 1915, 1927
BsmI GAATGC 2 cut(s) 1611, 2276
BsnI GGCC 2 cut(s) 513, 1667
BsoBI CYCGRG 1 cut(s) 1934
Bsp1286I GDGCHC 3 cut(s) 160, 268, 416
Bsp1407I TGTACA 1 cut(s) 2282
Bsp143I GATC 6 cut(s) 169, 422, 2044, 2113, 2298, 2324
BspACI CCGC 8 cut(s) 9, 514, 554, 613, 945, 1407, 1449, 2322
BspANI GGCC 2 cut(s) 513, 1667
BspCNI CTCAG 2 cut(s) 535, 999
BspFNI CGCG 1 cut(s) 2049
BspHI TCATGA 2 cut(s) 160, 1872
BspLI GGNNCC 5 cut(s) 558, 584, 585, 872, 2115
BspMI ACCTGC 2 cut(s) 1262, 1421
BspOI GCTAGC 1 cut(s) 945
BspPI GGATC 5 cut(s) 164, 430, 2108, 2121, 2332
BspQI GCTCTTC 1 cut(s) 1604
BspT107I GGYRCC 1 cut(s) 556
BsrDI GCAATG 2 cut(s) 1098, 1230
BsrGI TGTACA 1 cut(s) 2282
BsrI ACTGG 4 cut(s) 1069, 1087, 1345, 2258
BssECI CCNNGG 1 cut(s) 321
BssMI GATC 6 cut(s) 169, 422, 2044, 2113, 2298, 2324
Bst2UI CCWGG 5 cut(s) 323, 462, 480, 561, 1295
Bst4CI ACNGT 5 cut(s) 503, 528, 1001, 1031, 2335
Bst6I CTCTTC 5 cut(s) 425, 674, 1499, 1604, 1617
BstAUI TGTACA 1 cut(s) 2282
BstBAI YACGTR 2 cut(s) 1178, 1919
BstC8I GCNNGC 3 cut(s) 7, 943, 1697
BstDEI CTNAG 5 cut(s) 187, 543, 986, 2009, 2059
BstEII GGTNACC 1 cut(s) 1480
BstF5I GGATG 8 cut(s) 242, 322, 388, 863, 1073, 1635, 1836, 1978
BstFNI CGCG 1 cut(s) 2049
BstHHI GCGC 1 cut(s) 2051
BstKTI GATC 6 cut(s) 172, 425, 2047, 2116, 2301, 2327
BstMAI GTCTC 2 cut(s) 341, 989
BstMBI GATC 6 cut(s) 169, 422, 2044, 2113, 2298, 2324
BstMWI GCNNNNNNNGC 3 cut(s) 227, 1016, 1208
BstNI CCWGG 5 cut(s) 323, 462, 480, 561, 1295
BstNSI RCATGY 1 cut(s) 2251
BstPI GGTNACC 1 cut(s) 1480
BstSCI CCNGG 5 cut(s) 321, 460, 478, 559, 1293
BstSFI CTRYAG 2 cut(s) 1978, 2310
BstUI CGCG 1 cut(s) 2049
BstV1I GCAGC 5 cut(s) 43, 387, 753, 994, 1711
BstV2I GAAGAC 1 cut(s) 723
BstX2I RGATCY 1 cut(s) 2113
BstYI RGATCY 1 cut(s) 2113
BsuI GTATCC 3 cut(s) 1031, 1401, 2171
BsuRI GGCC 2 cut(s) 513, 1667
BtsCI GGATG 8 cut(s) 242, 322, 388, 863, 1073, 1635, 1836, 1978
BtsI GCAGTG 2 cut(s) 1171, 1506
BtsIMutI CAGTG 6 cut(s) 80, 361, 524, 846, 1171, 1506
BveI ACCTGC 2 cut(s) 1262, 1421
Cac8I GCNNGC 3 cut(s) 7, 943, 1697
CciI TCATGA 2 cut(s) 160, 1872
CfoI GCGC 1 cut(s) 2051
Cfr13I GGNCC 5 cut(s) 563, 583, 871, 1457, 1666
Csp6I GTAC 3 cut(s) 253, 1645, 2283
CviQI GTAC 3 cut(s) 253, 1645, 2283
DdeI CTNAG 5 cut(s) 187, 543, 986, 2009, 2059
DpnI GATC 6 cut(s) 171, 424, 2046, 2115, 2300, 2326
DpnII GATC 6 cut(s) 169, 422, 2044, 2113, 2298, 2324
DraIII CACNNNGTG 1 cut(s) 2126
DriI GACNNNNNGTC 1 cut(s) 1068
EaeI YGGCCR 1 cut(s) 511
Eam1104I CTCTTC 5 cut(s) 425, 674, 1499, 1604, 1617
Eam1105I GACNNNNNGTC 1 cut(s) 1068
EarI CTCTTC 5 cut(s) 425, 674, 1499, 1604, 1617
Ecl136II GAGCTC 2 cut(s) 266, 414
Eco24I GRGCYC 2 cut(s) 268, 416
Eco32I GATATC 1 cut(s) 814
Eco47I GGWCC 4 cut(s) 563, 583, 871, 1457
Eco53kI GAGCTC 2 cut(s) 266, 414
Eco57I CTGAAG 1 cut(s) 870
Eco72I CACGTG 1 cut(s) 1919
Eco88I CYCGRG 1 cut(s) 1934
Eco91I GGTNACC 1 cut(s) 1480
EcoICRI GAGCTC 2 cut(s) 266, 414
EcoO109I RGGNCCY 2 cut(s) 563, 583
EcoO65I GGTNACC 1 cut(s) 1480
EcoRII CCWGG 5 cut(s) 321, 460, 478, 559, 1293
EcoRV GATATC 1 cut(s) 814
EcoT22I ATGCAT 2 cut(s) 1174, 2074
EcoT38I GRGCYC 2 cut(s) 268, 416
FalI AAGNNNNNCTT 2 cut(s) 2236, 2268
FaqI GGGAC 5 cut(s) 596, 884, 1380, 1915, 1927
FbaI TGATCA 1 cut(s) 2298
FblI GTMKAC 2 cut(s) 1158, 2203
Fnu4HI GCNGC 9 cut(s) 57, 401, 514, 614, 767, 946, 1008, 1407, 1700
FokI GGATG 8 cut(s) 229, 329, 395, 870, 1080, 1642, 1843, 1985
FriOI GRGCYC 2 cut(s) 268, 416
Fsp4HI GCNGC 9 cut(s) 57, 401, 514, 614, 767, 946, 1008, 1407, 1700
FspBI CTAG 7 cut(s) 894, 942, 1439, 1689, 1703, 2102, 2199
GlaI GCGC 1 cut(s) 2050
GluI GCNGC 9 cut(s) 57, 401, 514, 614, 767, 946, 1008, 1407, 1700
GsuI CTGGAG 3 cut(s) 282, 483, 1559
HaeIII GGCC 2 cut(s) 513, 1667
HapII CCGG 1 cut(s) 1485
HhaI GCGC 1 cut(s) 2051
Hin6I GCGC 1 cut(s) 2049
HinP1I GCGC 1 cut(s) 2049
HincII GTYRAC 4 cut(s) 499, 1159, 2204, 2235
HindII GTYRAC 4 cut(s) 499, 1159, 2204, 2235
HindIII AAGCTT 2 cut(s) 112, 1660
HinfI GANTC 9 cut(s) 208, 341, 803, 827, 971, 1121, 1682, 1834, 2129
HpaI GTTAAC 1 cut(s) 499
HpaII CCGG 1 cut(s) 1485
HphI GGTGA 6 cut(s) 104, 371, 1286, 1492, 1631, 2138
Hpy166II GTNNAC 7 cut(s) 141, 499, 540, 1159, 1756, 2204, 2235
Hpy188III TCNNGA 7 cut(s) 161, 261, 575, 1524, 1773, 1873, 2369
Hpy8I GTNNAC 7 cut(s) 141, 499, 540, 1159, 1756, 2204, 2235
HpyAV CCTTC 8 cut(s) 267, 289, 845, 1439, 1727, 1795, 2062, 2084
HpyCH4III ACNGT 5 cut(s) 503, 528, 1001, 1031, 2335
HpyCH4IV ACGT 3 cut(s) 1177, 1717, 1918
HpyF10VI GCNNNNNNNGC 3 cut(s) 227, 1016, 1208
HpyF3I CTNAG 5 cut(s) 187, 543, 986, 2009, 2059
HpySE526I ACGT 3 cut(s) 1177, 1717, 1918
HspAI GCGC 1 cut(s) 2049
KflI GGGWCCC 1 cut(s) 583
Ksp22I TGATCA 1 cut(s) 2298
KspAI GTTAAC 1 cut(s) 499
Kzo9I GATC 6 cut(s) 169, 422, 2044, 2113, 2298, 2324
LguI GCTCTTC 1 cut(s) 1604
LmnI GCTCC 2 cut(s) 42, 263
Lsp1109I GCAGC 5 cut(s) 43, 387, 753, 994, 1711
LweI GCATC 8 cut(s) 251, 307, 352, 848, 1159, 1181, 1682, 2296
MaeI CTAG 7 cut(s) 894, 942, 1439, 1689, 1703, 2102, 2199
MaeII ACGT 3 cut(s) 1177, 1717, 1918
MaeIII GTNAC 7 cut(s) 298, 522, 728, 920, 995, 1025, 1480
MalI GATC 6 cut(s) 171, 424, 2046, 2115, 2300, 2326
MboI GATC 6 cut(s) 169, 422, 2044, 2113, 2298, 2324
MfeI CAATTG 2 cut(s) 517, 807
MflI RGATCY 1 cut(s) 2113
MhlI GDGCHC 3 cut(s) 160, 268, 416
MlyI GAGTC 1 cut(s) 217
MmeI TCCRAC 2 cut(s) 956, 2141
MnlI CCTC 6 cut(s) 426, 675, 1500, 1620, 2148, 2179
Mph1103I ATGCAT 2 cut(s) 1174, 2074
MroXI GAANNNNTTC 1 cut(s) 1957
MslI CAYNNNNRTG 5 cut(s) 216, 309, 529, 1180, 2040
MspI CCGG 1 cut(s) 1485
MspR9I CCNGG 5 cut(s) 323, 462, 480, 561, 1295
MunI CAATTG 2 cut(s) 517, 807
Mva1269I GAATGC 2 cut(s) 1611, 2276
MvaI CCWGG 5 cut(s) 323, 462, 480, 561, 1295
MvnI CGCG 1 cut(s) 2049
MwoI GCNNNNNNNGC 3 cut(s) 227, 1016, 1208
NdeII GATC 6 cut(s) 169, 422, 2044, 2113, 2298, 2324
NheI GCTAGC 1 cut(s) 941
NlaIV GGNNCC 5 cut(s) 558, 584, 585, 872, 2115
NmuCI GTSAC 3 cut(s) 522, 995, 1480
NsiI ATGCAT 2 cut(s) 1174, 2074
NspI RCATGY 1 cut(s) 2251
OliI CACNNNNGTG 2 cut(s) 529, 1180
PagI TCATGA 2 cut(s) 160, 1872
PaqCI CACCTGC 2 cut(s) 1262, 1421
PciSI GCTCTTC 1 cut(s) 1604
PctI GAATGC 2 cut(s) 1611, 2276
PdmI GAANNNNTTC 1 cut(s) 1957
PfeI GAWTC 8 cut(s) 341, 803, 827, 971, 1121, 1682, 1834, 2129
PfoI TCCNGGA 2 cut(s) 460, 1293
PkrI GCNGC 9 cut(s) 58, 402, 515, 615, 768, 947, 1009, 1408, 1701
PleI GAGTC 1 cut(s) 216
PmaCI CACGTG 1 cut(s) 1919
PmlI CACGTG 1 cut(s) 1919
PpsI GAGTC 1 cut(s) 216
Ppu21I YACGTR 2 cut(s) 1178, 1919
PpuMI RGGWCCY 2 cut(s) 563, 583
PshBI ATTAAT 1 cut(s) 2108
PsiI TTATAA 1 cut(s) 1467
Psp124BI GAGCTC 2 cut(s) 268, 416
Psp1406I AACGTT 1 cut(s) 1717
Psp5II RGGWCCY 2 cut(s) 563, 583
Psp6I CCWGG 5 cut(s) 321, 460, 478, 559, 1293
PspCI CACGTG 1 cut(s) 1919
PspEI GGTNACC 1 cut(s) 1480
PspGI CCWGG 5 cut(s) 321, 460, 478, 559, 1293
PspN4I GGNNCC 5 cut(s) 558, 584, 585, 872, 2115
PspPI GGNCC 5 cut(s) 563, 583, 871, 1457, 1666
PspPPI RGGWCCY 2 cut(s) 563, 583
PsuI RGATCY 1 cut(s) 2113
RsaI GTAC 3 cut(s) 254, 1646, 2284
RsaNI GTAC 3 cut(s) 253, 1645, 2283
RseI CAYNNNNRTG 5 cut(s) 216, 309, 529, 1180, 2040
SacI GAGCTC 2 cut(s) 268, 416
SalI GTCGAC 2 cut(s) 1157, 2202
SapI GCTCTTC 1 cut(s) 1604
SatI GCNGC 9 cut(s) 57, 401, 514, 614, 767, 946, 1008, 1407, 1700
Sau3AI GATC 6 cut(s) 169, 422, 2044, 2113, 2298, 2324
Sau96I GGNCC 5 cut(s) 563, 583, 871, 1457, 1666
SchI GAGTC 1 cut(s) 217
ScrFI CCNGG 5 cut(s) 323, 462, 480, 561, 1295
SduI GDGCHC 3 cut(s) 160, 268, 416
SfaNI GCATC 8 cut(s) 251, 307, 352, 848, 1159, 1181, 1682, 2296
SfcI CTRYAG 2 cut(s) 1978, 2310
SinI GGWCC 4 cut(s) 563, 583, 871, 1457
SmiMI CAYNNNNRTG 5 cut(s) 216, 309, 529, 1180, 2040
SmlI CTYRAG 1 cut(s) 1743
SmoI CTYRAG 1 cut(s) 1743
SsiI CCGC 8 cut(s) 9, 514, 554, 613, 945, 1407, 1449, 2322
SspI AATATT 2 cut(s) 670, 1769
SspMI CTAG 7 cut(s) 894, 942, 1439, 1689, 1703, 2102, 2199
SstI GAGCTC 2 cut(s) 268, 416
StyD4I CCNGG 5 cut(s) 321, 460, 478, 559, 1293
TaaI ACNGT 5 cut(s) 503, 528, 1001, 1031, 2335
TaiI ACGT 3 cut(s) 1180, 1720, 1921
TaqI TCGA 3 cut(s) 15, 1158, 2203
TatI WGTACW 2 cut(s) 1644, 2282
TauI GCSGC 4 cut(s) 516, 616, 948, 1409
TfiI GAWTC 8 cut(s) 341, 803, 827, 971, 1121, 1682, 1834, 2129
TscAI CASTG 6 cut(s) 87, 361, 531, 853, 1171, 1506
TseFI GTSAC 3 cut(s) 522, 995, 1480
TseI GCWGC 5 cut(s) 56, 400, 766, 1007, 1699
Tsp45I GTSAC 3 cut(s) 522, 995, 1480
TspRI CASTG 6 cut(s) 87, 361, 531, 853, 1171, 1506
VpaK11BI GGWCC 4 cut(s) 563, 583, 871, 1457
VspI ATTAAT 1 cut(s) 2108
XapI RAATTY 7 cut(s) 103, 148, 391, 902, 1094, 1842, 1954
XceI RCATGY 1 cut(s) 2251
XmiI GTMKAC 2 cut(s) 1158, 2203
XmnI GAANNNNTTC 1 cut(s) 1957
XspI CTAG 7 cut(s) 894, 942, 1439, 1689, 1703, 2102, 2199
Zsp2I ATGCAT 2 cut(s) 1174, 2074
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.