Rmu_sc0006827.1_g000025

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006827.1
Physical Location & Seq
Reverse (-)
82320 .. 85651
3332 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006827.1_g000025.1.cds

Sequence Viewer

Length: 2229 bp
atggttaatgtgatgatcatgtttgctgttcaagaaaatcaggagaaagcaaagtatcttctgatcatcaaccatggttttaggtttgatcaactcttaattttcttcctgatcattcttccaagctcgtggaattgtcatgttgctgctgcagcagacaatattggggacacactcaaagtaggcgacactatcaattcctcaagcgctttagtttccaccactgggaagttcactttgcttttcttgcccctcagttcaggttccaactacagctatctatatattaggcggtacaatgtaagtggtgcgaatagggcttgggttggcaaccgagactcgcctgttctatacccttttggagttcttaccttggactccaacaacacattaaaaatcattacaaacaacgaaggcggcggcggcgatcctcctatagtgcttggctccgtgccaaaaagtagtagtaatgttgcggctactctgttggattctggcaattttatcctacaagagttgaactccgatggatcaacgaagcaggtgtggtggcaaagttttgattatccagcagatacctttttaccaggcatgaagttaggtgtcaaccgtagcaacgggcacatttggtctcttacgtcatggacatccgttagctacccaccgccggggcctttcatcctagattgggacccaactgcccgccaattggaaattcgaagagaaggggtggtttattggagaagcggaaactatagtgctacaaacaacagattccaaaacattttgccgaatgcaaaggttagctacaagtttagcattgtttcaaatgagaatgaagactacctcacttacacttctgaagatggtgcatatgagttaccagaatggattctaaattattatgggaagctttttaattattatggatcgggaattgatattgcacgagcagatcagtgtggaggctacaacacagatggagtagggtgccagacaactagccggccaaccacttgtatggcggatgtccgcagtccatttgagctaaaaaaaggttcctttaaaccaatcacctcgagttcaacttcaagatgcccatactcgctcaactttgtatcaaatggaagtcacagtggtactagtattgactgtaacaatacttgtttgcagaactgtgactgccttggattcgactttctatttgataatcagactggatgccgattttggagtgtggactgtcagttcgttgaagaccgcactcaacctggtaatgcaagcaatttggttttgacaaagctaatgccaacggcaaaatcaccaccgccaaagtcaccaccaagcaaaagtggtgagggtaagatcgaccagaatgaattgctgaacttcaggaattctaagaggcctactgatttgaatgaacttcaaaatgatggaaagatgggacatgatttgagcgtatttagctatgcatctgtaatggctgccacaatcaacttcgctgaagaaaacaagcttggagaagggggctttggacctgtttataaggggaaattggcaacgggacaagaagtagctgtgaagaggctttcaaaatgttcagggcaaggaacactagagtttaagaatgaattgatcctcatacatgaacttcaacatacaaaccttgtccagctttttggattttgcattcacgattttggtatggctaggattttctccattaatgaactagaagcaaatactagtaggattgttgggacacgtggttacatgcctcctgagtacgcaatggaaggaattttctctacaaaatccgatgtctacagttttggagtgttagtgcttgaaatcacaagtggtaggagaaacaatagcttctacaatgatgatcgcgccatcaatttagtaggatatgcatgggagttgtggaaagaaggcgcagggctagaactaatggatccaacactagctgattcgtgtactaacaaagatcaactgttaagatgcgttcaagttggtcttctatgcgtggaggatagtgcagcgaatcgacctaccatgtcagatgtgctttccggtttgacaaatgaaagctcattacctgcacctacaaagccagcattttctacagatagacatgcgatcaccagtagtatagttgaaaaggaaccacaatctttatctgtaaatgatctgaccatttcagattgtgatggacgttaa

Protein Analysis

742

Amino Acids

81.77

Weight (kDa)

5.24

Isoelectric Point (pI)

39.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1548
AarI CACCTGC 1 cut(s) 532
Acc36I ACCTGC 2 cut(s) 532, 2116
AccB1I GGYRCC 1 cut(s) 990
AccI GTMKAC 1 cut(s) 1827
AccII CGCG 1 cut(s) 1899
AclWI GGATC 6 cut(s) 422, 538, 937, 1633, 1958, 1971
AcoI YGGCCR 1 cut(s) 1007
AcsI RAATTY 3 cut(s) 714, 1396, 1803
AcuI CTGAAG 3 cut(s) 882, 1375, 1527
AcvI CACGTG 1 cut(s) 1769
AfaI GTAC 4 cut(s) 296, 1141, 1790, 1987
AfeI AGCGCT 1 cut(s) 208
AfiI CCNNNNNNNGG 5 cut(s) 225, 667, 668, 688, 709
AflIII ACRYGT 1 cut(s) 1766
AhlI ACTAGT 2 cut(s) 1142, 1748
AjnI CCWGG 2 cut(s) 586, 1270
AjuI GAANNNNNNNTTGG 6 cut(s) 699, 731, 1503, 1518, 1535, 1550
AloI GAACNNNNNNTCC 2 cut(s) 1232, 1264
Alw26I GTCTC 2 cut(s) 330, 636
AlwI GGATC 6 cut(s) 422, 538, 937, 1633, 1958, 1971
Ama87I CYCGRG 1 cut(s) 1078
Aor51HI AGCGCT 1 cut(s) 208
AoxI GGCC 3 cut(s) 671, 1007, 1406
ApeKI GCWGC 5 cut(s) 146, 149, 152, 1487, 2048
ApoI RAATTY 3 cut(s) 714, 1396, 1803
ArsI GACNNNNNNTTYG 4 cut(s) 1187, 1219, 1232, 1264
AseI ATTAAT 1 cut(s) 1728
Asp700I GAANNNNTTC 1 cut(s) 891
AspLEI GCGC 3 cut(s) 209, 1901, 1946
AspS9I GGNCC 3 cut(s) 671, 691, 1538
AsuC2I CCSGG 1 cut(s) 669
AsuHPI GGTGA 5 cut(s) 1066, 1314, 1329, 1367, 2143
AsuII TTCGAA 1 cut(s) 718
AvaI CYCGRG 1 cut(s) 1078
AvaII GGWCC 2 cut(s) 691, 1538
BaeGI GKGCMC 1 cut(s) 624
BamHI GGATCC 1 cut(s) 1963
BanI GGYRCC 1 cut(s) 990
BauI CACGAG 2 cut(s) 127, 948
BbrPI CACGTG 1 cut(s) 1769
BbsI GAAGAC 3 cut(s) 846, 1263, 2018
BbvI GCAGC 5 cut(s) 133, 136, 164, 1474, 2060
BccI CCATC 7 cut(s) 521, 860, 974, 1430, 1438, 1910, 2213
BceAI ACGGC 1 cut(s) 1329
BciT130I CCWGG 2 cut(s) 588, 1272
BclI TGATCA 4 cut(s) 15, 63, 88, 111
BcnI CCSGG 1 cut(s) 669
BcoDI GTCTC 2 cut(s) 330, 636
BcuI ACTAGT 2 cut(s) 1142, 1748
BfaI CTAG 9 cut(s) 683, 1002, 1143, 1619, 1713, 1736, 1749, 1952, 1973
BfmI CTRYAG 6 cut(s) 150, 271, 435, 754, 1828, 2133
BfoI RGCGCY 1 cut(s) 210
BfuAI ACCTGC 2 cut(s) 532, 2116
BisI GCNGC 9 cut(s) 147, 150, 153, 418, 421, 424, 477, 1488, 2049
BlsI GCNGC 9 cut(s) 148, 151, 154, 419, 422, 425, 478, 1489, 2050
Bme1390I CCNGG 3 cut(s) 588, 669, 1272
Bme18I GGWCC 2 cut(s) 691, 1538
BmeT110I CYCGRG 1 cut(s) 1078
BmgT120I GGNCC 3 cut(s) 671, 691, 1538
BmiI GGNNCC 9 cut(s) 265, 448, 672, 692, 693, 992, 1060, 1965, 2175
BmrFI CCNGG 3 cut(s) 588, 669, 1272
BmrI ACTGGG 1 cut(s) 234
BmsI GCATC 4 cut(s) 1085, 1211, 1484, 2000
BmuI ACTGGG 1 cut(s) 234
BpiI GAAGAC 3 cut(s) 846, 1263, 2018
BplI GAGNNNNNCTC 2 cut(s) 506, 538
Bpu14I TTCGAA 1 cut(s) 718
BpuEI CTTGAG 1 cut(s) 187
BpuMI CCSGG 1 cut(s) 669
BsaAI YACGTR 1 cut(s) 1769
BsaI GGTCTC 1 cut(s) 636
BsaJI CCNNGG 4 cut(s) 73, 372, 668, 1186
BsaWI WCCGGW 1 cut(s) 2081
BsaXI ACNNNNNCTCC 2 cut(s) 1830, 1860
Bsc4I CCNNNNNNNGG 5 cut(s) 225, 667, 668, 688, 709
Bse118I RCCGGY 1 cut(s) 1005
Bse1I ACTGG 3 cut(s) 229, 1222, 2154
Bse3DI GCAATG 1 cut(s) 1800
BseBI CCWGG 2 cut(s) 588, 1272
BseDI CCNNGG 4 cut(s) 73, 372, 668, 1186
BseGI GGATG 4 cut(s) 647, 678, 1033, 1226
BseLI CCNNNNNNNGG 5 cut(s) 225, 667, 668, 688, 709
BseMI GCAATG 1 cut(s) 1800
BseMII CTCAG 2 cut(s) 268, 1776
BseNI ACTGG 3 cut(s) 229, 1222, 2154
BseSI GKGCMC 1 cut(s) 624
BseXI GCAGC 5 cut(s) 133, 136, 164, 1474, 2060
BsgI GTGCAG 2 cut(s) 2067, 2094
Bsh1236I CGCG 1 cut(s) 1899
BshFI GGCC 3 cut(s) 673, 1009, 1408
BshNI GGYRCC 1 cut(s) 990
BsiHKCI CYCGRG 1 cut(s) 1078
BsiSI CCGG 3 cut(s) 668, 1006, 2082
BslFI GGGAC 5 cut(s) 182, 704, 1461, 1581, 1777
BslI CCNNNNNNNGG 5 cut(s) 225, 667, 668, 688, 709
BsmAI GTCTC 2 cut(s) 330, 636
BsmFI GGGAC 5 cut(s) 182, 704, 1461, 1581, 1777
BsmI GAATGC 2 cut(s) 799, 1692
BsnI GGCC 3 cut(s) 673, 1009, 1408
Bso31I GGTCTC 1 cut(s) 636
BsoBI CYCGRG 1 cut(s) 1078
Bsp119I TTCGAA 1 cut(s) 718
Bsp1286I GDGCHC 1 cut(s) 624
Bsp19I CCATGG 1 cut(s) 73
BspANI GGCC 3 cut(s) 673, 1009, 1408
BspCNI CTCAG 2 cut(s) 267, 1777
BspFNI CGCG 1 cut(s) 1899
BspLI GGNNCC 9 cut(s) 265, 448, 672, 692, 693, 992, 1060, 1965, 2175
BspMAI CTGCAG 1 cut(s) 154
BspMI ACCTGC 2 cut(s) 532, 2116
BspPI GGATC 6 cut(s) 422, 538, 937, 1633, 1958, 1971
BspT104I TTCGAA 1 cut(s) 718
BspT107I GGYRCC 1 cut(s) 990
BspTNI GGTCTC 1 cut(s) 636
BsrDI GCAATG 1 cut(s) 1800
BsrFI RCCGGY 1 cut(s) 1005
BsrI ACTGG 3 cut(s) 229, 1222, 2154
BssAI RCCGGY 1 cut(s) 1005
BssECI CCNNGG 4 cut(s) 73, 372, 668, 1186
BssSI CACGAG 2 cut(s) 127, 948
BssT1I CCWWGG 3 cut(s) 73, 372, 1186
Bst2BI CACGAG 2 cut(s) 127, 948
Bst2UI CCWGG 2 cut(s) 588, 1272
Bst4CI ACNGT 7 cut(s) 611, 1136, 1154, 1178, 1244, 1832, 2004
Bst6I CTCTTC 2 cut(s) 715, 1580
BstBAI YACGTR 1 cut(s) 1769
BstBI TTCGAA 1 cut(s) 718
BstC8I GCNNGC 4 cut(s) 703, 1007, 1282, 2124
BstDEI CTNAG 3 cut(s) 254, 1401, 1785
BstDSI CCRYGG 1 cut(s) 73
BstF5I GGATG 4 cut(s) 647, 678, 1033, 1226
BstFNI CGCG 1 cut(s) 1899
BstH2I RGCGCY 1 cut(s) 210
BstHHI GCGC 3 cut(s) 209, 1901, 1946
BstMAI GTCTC 2 cut(s) 330, 636
BstMWI GCNNNNNNNGC 5 cut(s) 152, 247, 317, 423, 1467
BstNI CCWGG 2 cut(s) 588, 1272
BstNSI RCATGY 2 cut(s) 1780, 2147
BstSCI CCNGG 3 cut(s) 586, 667, 1270
BstSFI CTRYAG 6 cut(s) 150, 271, 435, 754, 1828, 2133
BstSLI GKGCMC 1 cut(s) 624
BstUI CGCG 1 cut(s) 1899
BstV1I GCAGC 5 cut(s) 133, 136, 164, 1474, 2060
BstV2I GAAGAC 3 cut(s) 846, 1263, 2018
BstX2I RGATCY 1 cut(s) 1963
BstXI CCANNNNNNTGG 3 cut(s) 129, 1021, 1682
BstYI RGATCY 1 cut(s) 1963
BsuRI GGCC 3 cut(s) 673, 1009, 1408
BtgI CCRYGG 1 cut(s) 73
BtsCI GGATG 4 cut(s) 647, 678, 1033, 1226
BtsIMutI CAGTG 3 cut(s) 222, 965, 1141
BveI ACCTGC 2 cut(s) 532, 2116
Cac8I GCNNGC 4 cut(s) 703, 1007, 1282, 2124
CfoI GCGC 3 cut(s) 209, 1901, 1946
Cfr10I RCCGGY 1 cut(s) 1005
Cfr13I GGNCC 3 cut(s) 671, 691, 1538
CsiI ACCWGGT 1 cut(s) 1270
Csp6I GTAC 4 cut(s) 295, 1140, 1789, 1986
CspCI CAANNNNNGTGG 2 cut(s) 286, 321
CviQI GTAC 4 cut(s) 295, 1140, 1789, 1986
DdeI CTNAG 3 cut(s) 254, 1401, 1785
DraI TTTAAA 1 cut(s) 1066
EaeI YGGCCR 1 cut(s) 1007
Eam1104I CTCTTC 2 cut(s) 715, 1580
EarI CTCTTC 2 cut(s) 715, 1580
EciI GGCGGA 1 cut(s) 1040
Eco130I CCWWGG 3 cut(s) 73, 372, 1186
Eco147I AGGCCT 1 cut(s) 1408
Eco31I GGTCTC 1 cut(s) 636
Eco47I GGWCC 2 cut(s) 691, 1538
Eco47III AGCGCT 1 cut(s) 208
Eco57I CTGAAG 3 cut(s) 882, 1375, 1527
Eco72I CACGTG 1 cut(s) 1769
Eco88I CYCGRG 1 cut(s) 1078
EcoO109I RGGNCCY 2 cut(s) 671, 691
EcoRI GAATTC 1 cut(s) 1396
EcoRII CCWGG 2 cut(s) 586, 1270
EcoT14I CCWWGG 3 cut(s) 73, 372, 1186
EcoT22I ATGCAT 2 cut(s) 1477, 1924
ErhI CCWWGG 3 cut(s) 73, 372, 1186
FalI AAGNNNNNCTT 2 cut(s) 2010, 2042
FaqI GGGAC 5 cut(s) 182, 704, 1461, 1581, 1777
FauI CCCGC 1 cut(s) 710
FauNDI CATATG 1 cut(s) 874
FbaI TGATCA 4 cut(s) 15, 63, 88, 111
FblI GTMKAC 1 cut(s) 1827
Fnu4HI GCNGC 9 cut(s) 147, 150, 153, 418, 421, 424, 477, 1488, 2049
FokI GGATG 4 cut(s) 634, 665, 1040, 1233
Fsp4HI GCNGC 9 cut(s) 147, 150, 153, 418, 421, 424, 477, 1488, 2049
FspBI CTAG 9 cut(s) 683, 1002, 1143, 1619, 1713, 1736, 1749, 1952, 1973
GlaI GCGC 3 cut(s) 208, 1900, 1945
GluI GCNGC 9 cut(s) 147, 150, 153, 418, 421, 424, 477, 1488, 2049
HaeII RGCGCY 1 cut(s) 210
HaeIII GGCC 3 cut(s) 673, 1009, 1408
HapII CCGG 3 cut(s) 668, 1006, 2082
HhaI GCGC 3 cut(s) 209, 1901, 1946
Hin6I GCGC 3 cut(s) 207, 1899, 1944
HinP1I GCGC 3 cut(s) 207, 1899, 1944
HincII GTYRAC 1 cut(s) 607
HindII GTYRAC 1 cut(s) 607
HindIII AAGCTT 2 cut(s) 911, 1517
HinfI GANTC 8 cut(s) 338, 377, 491, 774, 892, 1191, 1979, 2053
HpaII CCGG 3 cut(s) 668, 1006, 2082
HphI GGTGA 5 cut(s) 1066, 1314, 1329, 1367, 2143
Hpy166II GTNNAC 5 cut(s) 234, 607, 1240, 1828, 1986
Hpy188I TCNGA 8 cut(s) 63, 526, 862, 1215, 1822, 2071, 2202, 2212
Hpy188III TCNNGA 8 cut(s) 32, 41, 109, 933, 1092, 1393, 1697, 1784
Hpy8I GTNNAC 5 cut(s) 234, 607, 1240, 1828, 1986
HpyAV CCTTC 5 cut(s) 407, 719, 1520, 1793, 1934
HpyCH4III ACNGT 7 cut(s) 611, 1136, 1154, 1178, 1244, 1832, 2004
HpyCH4IV ACGT 3 cut(s) 638, 1768, 2224
HpyF10VI GCNNNNNNNGC 5 cut(s) 152, 247, 317, 423, 1467
HpyF3I CTNAG 3 cut(s) 254, 1401, 1785
HpySE526I ACGT 3 cut(s) 638, 1768, 2224
HspAI GCGC 3 cut(s) 207, 1899, 1944
KflI GGGWCCC 1 cut(s) 691
KroI GCCGGC 1 cut(s) 1005
KroNI GCCGGC 1 cut(s) 1007
Ksp22I TGATCA 4 cut(s) 15, 63, 88, 111
LmnI GCTCC 1 cut(s) 452
Lsp1109I GCAGC 5 cut(s) 133, 136, 164, 1474, 2060
LweI GCATC 4 cut(s) 1085, 1211, 1484, 2000
MabI ACCWGGT 1 cut(s) 1270
MaeI CTAG 9 cut(s) 683, 1002, 1143, 1619, 1713, 1736, 1749, 1952, 1973
MaeII ACGT 3 cut(s) 638, 1768, 2224
MaeIII GTNAC 6 cut(s) 879, 1130, 1154, 1178, 1335, 1772
MfeI CAATTG 1 cut(s) 707
MflI RGATCY 1 cut(s) 1963
MhlI GDGCHC 1 cut(s) 624
MlyI GAGTC 2 cut(s) 332, 371
MmeI TCCRAC 4 cut(s) 291, 405, 468, 1991
Mph1103I ATGCAT 2 cut(s) 1477, 1924
MroNI GCCGGC 1 cut(s) 1005
MroXI GAANNNNTTC 1 cut(s) 891
MseI TTAA 9 cut(s) 6, 98, 392, 918, 1065, 1626, 1728, 2006, 2227
MslI CAYNNNNRTG 1 cut(s) 1019
MspI CCGG 3 cut(s) 668, 1006, 2082
MspR9I CCNGG 3 cut(s) 588, 669, 1272
MunI CAATTG 1 cut(s) 707
Mva1269I GAATGC 2 cut(s) 799, 1692
MvaI CCWGG 2 cut(s) 588, 1272
MvnI CGCG 1 cut(s) 1899
MwoI GCNNNNNNNGC 5 cut(s) 152, 247, 317, 423, 1467
NaeI GCCGGC 1 cut(s) 1007
NciI CCSGG 1 cut(s) 669
NcoI CCATGG 1 cut(s) 73
NdeI CATATG 1 cut(s) 874
NgoMIV GCCGGC 1 cut(s) 1005
NlaIV GGNNCC 9 cut(s) 265, 448, 672, 692, 693, 992, 1060, 1965, 2175
NmuCI GTSAC 3 cut(s) 1130, 1178, 1335
NsiI ATGCAT 2 cut(s) 1477, 1924
NspI RCATGY 2 cut(s) 1780, 2147
NspV TTCGAA 1 cut(s) 718
PaeR7I CTCGAG 1 cut(s) 1078
PaqCI CACCTGC 1 cut(s) 532
PceI AGGCCT 1 cut(s) 1408
PctI GAATGC 2 cut(s) 799, 1692
PdiI GCCGGC 1 cut(s) 1007
PdmI GAANNNNTTC 1 cut(s) 891
PfeI GAWTC 6 cut(s) 491, 774, 892, 1191, 1979, 2053
PkrI GCNGC 9 cut(s) 148, 151, 154, 419, 422, 425, 478, 1489, 2050
PleI GAGTC 2 cut(s) 332, 371
PmaCI CACGTG 1 cut(s) 1769
PmlI CACGTG 1 cut(s) 1769
PpsI GAGTC 2 cut(s) 332, 371
Ppu21I YACGTR 1 cut(s) 1769
PpuMI RGGWCCY 1 cut(s) 691
PshBI ATTAAT 1 cut(s) 1728
PsiI TTATAA 1 cut(s) 1548
Psp5II RGGWCCY 1 cut(s) 691
Psp6I CCWGG 2 cut(s) 586, 1270
PspCI CACGTG 1 cut(s) 1769
PspGI CCWGG 2 cut(s) 586, 1270
PspN4I GGNNCC 9 cut(s) 265, 448, 672, 692, 693, 992, 1060, 1965, 2175
PspPI GGNCC 3 cut(s) 671, 691, 1538
PspPPI RGGWCCY 1 cut(s) 691
PspXI VCTCGAGB 1 cut(s) 1078
PstI CTGCAG 1 cut(s) 154
PsuI RGATCY 1 cut(s) 1963
RsaI GTAC 4 cut(s) 296, 1141, 1790, 1987
RsaNI GTAC 4 cut(s) 295, 1140, 1789, 1986
RseI CAYNNNNRTG 1 cut(s) 1019
SaqAI TTAA 9 cut(s) 6, 98, 392, 918, 1065, 1626, 1728, 2006, 2227
SatI GCNGC 9 cut(s) 147, 150, 153, 418, 421, 424, 477, 1488, 2049
Sau96I GGNCC 3 cut(s) 671, 691, 1538
SchI GAGTC 2 cut(s) 332, 371
ScrFI CCNGG 3 cut(s) 588, 669, 1272
SduI GDGCHC 1 cut(s) 624
SexAI ACCWGGT 1 cut(s) 1270
SfaNI GCATC 4 cut(s) 1085, 1211, 1484, 2000
SfcI CTRYAG 6 cut(s) 150, 271, 435, 754, 1828, 2133
Sfr274I CTCGAG 1 cut(s) 1078
SfuI TTCGAA 1 cut(s) 718
SinI GGWCC 2 cut(s) 691, 1538
SlaI CTCGAG 1 cut(s) 1078
SmiMI CAYNNNNRTG 1 cut(s) 1019
SmlI CTYRAG 2 cut(s) 202, 1078
SmoI CTYRAG 2 cut(s) 202, 1078
SpeI ACTAGT 2 cut(s) 1142, 1748
SseBI AGGCCT 1 cut(s) 1408
SspI AATATT 1 cut(s) 163
SspMI CTAG 9 cut(s) 683, 1002, 1143, 1619, 1713, 1736, 1749, 1952, 1973
StuI AGGCCT 1 cut(s) 1408
StyD4I CCNGG 3 cut(s) 586, 667, 1270
StyI CCWWGG 3 cut(s) 73, 372, 1186
TaaI ACNGT 7 cut(s) 611, 1136, 1154, 1178, 1244, 1832, 2004
TaiI ACGT 3 cut(s) 641, 1771, 2227
TaqI TCGA 5 cut(s) 718, 1079, 1194, 1368, 2056
TatI WGTACW 1 cut(s) 1985
TauI GCSGC 4 cut(s) 420, 423, 426, 479
TfiI GAWTC 6 cut(s) 491, 774, 892, 1191, 1979, 2053
Tru1I TTAA 9 cut(s) 6, 98, 392, 918, 1065, 1626, 1728, 2006, 2227
Tru9I TTAA 9 cut(s) 6, 98, 392, 918, 1065, 1626, 1728, 2006, 2227
TscAI CASTG 3 cut(s) 229, 965, 1141
TseFI GTSAC 3 cut(s) 1130, 1178, 1335
TseI GCWGC 5 cut(s) 146, 149, 152, 1487, 2048
Tsp45I GTSAC 3 cut(s) 1130, 1178, 1335
TspDTI ATGAA 9 cut(s) 608, 667, 852, 1392, 1437, 1647, 1665, 1746, 2109
TspGWI ACGGA 2 cut(s) 439, 640
TspRI CASTG 3 cut(s) 229, 965, 1141
VpaK11BI GGWCC 2 cut(s) 691, 1538
VspI ATTAAT 1 cut(s) 1728
XapI RAATTY 3 cut(s) 714, 1396, 1803
XceI RCATGY 2 cut(s) 1780, 2147
XhoI CTCGAG 1 cut(s) 1078
XmiI GTMKAC 1 cut(s) 1827
XmnI GAANNNNTTC 1 cut(s) 891
XspI CTAG 9 cut(s) 683, 1002, 1143, 1619, 1713, 1736, 1749, 1952, 1973
Zsp2I ATGCAT 2 cut(s) 1477, 1924
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.