Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0000096

Physical Location & Seq

Genomic Coordinates Forward (+)

18850264 .. 18851902

Gene Structure 1639 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG176200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1143 bp

ATGGCTAGAAGTCTCACCTTGATTTTCATTCTCATCACCCTGTTGGACTCCGGCACCTTTAACCTTATTCAGAGAGTGAAGTCCGATGATGATTCGGCTCCTCGAGGAACATTTCTGCCAGGCAAGAAGCTAGGTGTGAACCATAGAACCGGCAACATCTGGTCACTTTCATCATCACCAAGTCCTTTGGGTTCTTTCACACTTTCTTGGGAGCACAAACGACGCCAATTGCATATTAGCCTAGGTGAGGTGGTTTATTGGAGTAGTGGAGTCTTTAAAGATGGGAGGTTCGAATATATATCATCACCCAGGTACAATTTCACCATCGTTTCAAATAAAACAGAAGACTCCATCACCTACAGCACCGTGGATCATACTGATAAAGTGTCAGCATGGCTGCTGAAGGAAACGGGGGATCTGTATGATACTTATACAGGAGATGACATTGCGCGAGCAGACTGCGATGGCTATAGCACCGAGAAAGGGTGCCATAGAAGACTCCGGCCAAGTAGTTGCATGGCGACATTTGGGGTTGAGTTTCAGCTGAGAAAAGCTTACTGTCATTCAACTAGTGAAAGAACCCCATATTATTTTAGGAATGTAAGTTATGGCGCTAGTGAGTGCAAGGCTGCTTGTTGGCAAGATTGTGAATGCCTTGGCTTTGACATTGCGATTAATCAAACAGCTGGATGCCGGTTTTGGAGTGCAGACTGTCAATTTGATAAAGTCAGTGGATTCAGTTCTGGATCTAGTTTCGGTAATGGATCTAGTTTTGTGCTGTCAAGATTAATCCCTTTACAACCATCGTCTCCCAGAAGTATTAAACAAGATCCAGCACGTAGGTTGATCTGGATTGGCACTGCTGTTGTCTCTGCTCTACTGGTAATGGTGAGTTTGTTCGCCTGCTATCTACTAATAAGAAGAATAGGAAGGAGATTAGTACATTCAGGCCGAAATGGAGCAAAGGTTCAGGAAATTCTTACCTTGATGAAACCTAATATACCTACTCATGAAAATGATGGAAAGATAGGAAATGATATAAGCGTTTTTAGCTACACATCTGTTCTGGCTGCTACACGCAACTTCTCAGACGAAAACAAGCTCGGTGAAGGGGGGTTTGGATCTGTTTATCAGGTGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr

Protein Analysis

380

Amino Acids

42.25

Weight (kDa)

8.79

Isoelectric Point (pI)

51.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000096)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica	MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica	Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis	pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis	RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata	RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora	Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa	Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha	Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana	Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	102
AccB1I	GGYRCC	2 cut(s)	53, 486
AccII	CGCG	1 cut(s)	451
AclWI	GGATC	6 cut(s)	378, 423, 754, 772, 824, 1129
AcoI	YGGCCR	1 cut(s)	503
AcsI	RAATTY	1 cut(s)	975
AcuI	CTGAAG	1 cut(s)	422
AcyI	GRCGYC	1 cut(s)	223
AfaI	GTAC	2 cut(s)	314, 942
AfiI	CCNNNNNNNGG	2 cut(s)	247, 483
AgsI	TTSAA	2 cut(s)	333, 567
AhlI	ACTAGT	1 cut(s)	569
AjnI	CCWGG	2 cut(s)	118, 308
AjuI	GAANNNNNNNTTGG	2 cut(s)	1101, 1133
AloI	GAACNNNNNNTCC	2 cut(s)	951, 983
AluBI	AGCT	6 cut(s)	130, 544, 554, 686, 1053, 1102
AluI	AGCT	6 cut(s)	130, 544, 554, 686, 1053, 1102
Alw21I	GWGCWC	1 cut(s)	216
Alw26I	GTCTC	3 cut(s)	17, 813, 874
AlwI	GGATC	6 cut(s)	378, 423, 754, 772, 824, 1129
Ama87I	CYCGRG	1 cut(s)	102
AoxI	GGCC	2 cut(s)	503, 949
ApeKI	GCWGC	3 cut(s)	397, 629, 1070
ApoI	RAATTY	1 cut(s)	975
ArsI	GACNNNNNNTTYG	2 cut(s)	701, 733
AseI	ATTAAT	2 cut(s)	675, 788
AspA2I	CCTAGG	1 cut(s)	241
AspLEI	GCGC	2 cut(s)	451, 614
AsuHPI	GGTGA	9 cut(s)	7, 28, 168, 257, 297, 313, 346, 901, 1118
AsuII	TTCGAA	1 cut(s)	291
AvaI	CYCGRG	1 cut(s)	102
AvrII	CCTAGG	1 cut(s)	241
BanI	GGYRCC	2 cut(s)	53, 486
BbsI	GAAGAC	2 cut(s)	351, 502
Bbv12I	GWGCWC	1 cut(s)	216
BbvI	GCAGC	3 cut(s)	384, 616, 1057
BccI	CCATC	6 cut(s)	275, 332, 359, 458, 811, 1013
BcgI	CGANNNNNNTGC	2 cut(s)	441, 475
BciT130I	CCWGG	2 cut(s)	120, 310
BcoDI	GTCTC	3 cut(s)	17, 813, 874
BcuI	ACTAGT	1 cut(s)	569
BfaI	CTAG	8 cut(s)	6, 131, 242, 570, 615, 750, 768, 1141
BfmI	CTRYAG	2 cut(s)	358, 469
BfoI	RGCGCY	1 cut(s)	615
BisI	GCNGC	3 cut(s)	398, 630, 1071
BlnI	CCTAGG	1 cut(s)	241
BlsI	GCNGC	3 cut(s)	399, 631, 1072
Bme1390I	CCNGG	2 cut(s)	120, 310
BmeT110I	CYCGRG	1 cut(s)	102
BmiI	GGNNCC	3 cut(s)	55, 99, 488
BmrFI	CCNGG	2 cut(s)	120, 310
BmsI	GCATC	1 cut(s)	680
BpiI	GAAGAC	2 cut(s)	351, 502
Bpu14I	TTCGAA	1 cut(s)	291
BsaAI	YACGTR	1 cut(s)	839
BsaHI	GRCGYC	1 cut(s)	223
BsaJI	CCNNGG	4 cut(s)	241, 308, 366, 655
BsaXI	ACNNNNNCTCC	2 cut(s)	951, 981
Bsc4I	CCNNNNNNNGG	2 cut(s)	247, 483
Bse118I	RCCGGY	2 cut(s)	149, 693
Bse1I	ACTGG	1 cut(s)	885
Bse3DI	GCAATG	2 cut(s)	444, 666
BseBI	CCWGG	2 cut(s)	120, 310
BseDI	CCNNGG	4 cut(s)	241, 308, 366, 655
BseGI	GGATG	1 cut(s)	695
BseLI	CCNNNNNNNGG	2 cut(s)	247, 483
BseMI	GCAATG	2 cut(s)	444, 666
BseMII	CTCAG	2 cut(s)	536, 1101
BseNI	ACTGG	1 cut(s)	885
BseRI	GAGGAG	1 cut(s)	90
BseXI	GCAGC	3 cut(s)	384, 616, 1057
BsgI	GTGCAG	1 cut(s)	726
Bsh1236I	CGCG	1 cut(s)	451
BshFI	GGCC	2 cut(s)	505, 951
BshNI	GGYRCC	2 cut(s)	53, 486
BsiHKAI	GWGCWC	1 cut(s)	216
BsiHKCI	CYCGRG	1 cut(s)	102
BsiSI	CCGG	4 cut(s)	51, 150, 502, 694
BslI	CCNNNNNNNGG	2 cut(s)	247, 483
BsmAI	GTCTC	3 cut(s)	17, 813, 874
BsmBI	CGTCTC	1 cut(s)	813
BsmI	GAATGC	1 cut(s)	656
BsnI	GGCC	2 cut(s)	505, 951
BsoBI	CYCGRG	1 cut(s)	102
Bsp119I	TTCGAA	1 cut(s)	291
Bsp1286I	GDGCHC	1 cut(s)	216
Bsp143I	GATC	8 cut(s)	370, 415, 746, 764, 829, 846, 1121, 1137
BspANI	GGCC	2 cut(s)	505, 951
BspCNI	CTCAG	2 cut(s)	537, 1100
BspFNI	CGCG	1 cut(s)	451
BspHI	TCATGA	1 cut(s)	1009
BspLI	GGNNCC	3 cut(s)	55, 99, 488
BspPI	GGATC	6 cut(s)	378, 423, 754, 772, 824, 1129
BspT104I	TTCGAA	1 cut(s)	291
BspT107I	GGYRCC	2 cut(s)	53, 486
BsrDI	GCAATG	2 cut(s)	444, 666
BsrFI	RCCGGY	2 cut(s)	149, 693
BsrI	ACTGG	1 cut(s)	885
BssAI	RCCGGY	2 cut(s)	149, 693
BssECI	CCNNGG	4 cut(s)	241, 308, 366, 655
BssMI	GATC	8 cut(s)	370, 415, 746, 764, 829, 846, 1121, 1137
BssNI	GRCGYC	1 cut(s)	223
BssT1I	CCWWGG	2 cut(s)	241, 655
Bst2UI	CCWGG	2 cut(s)	120, 310
Bst4CI	ACNGT	3 cut(s)	367, 560, 713
BstACI	GRCGYC	1 cut(s)	223
BstBAI	YACGTR	1 cut(s)	839
BstBI	TTCGAA	1 cut(s)	291
BstC8I	GCNNGC	2 cut(s)	453, 904
BstDEI	CTNAG	2 cut(s)	545, 1087
BstDSI	CCRYGG	1 cut(s)	366
BstENI	CCTNNNNNAGG	1 cut(s)	245
BstF5I	GGATG	1 cut(s)	695
BstFNI	CGCG	1 cut(s)	451
BstH2I	RGCGCY	1 cut(s)	615
BstHHI	GCGC	2 cut(s)	451, 614
BstKTI	GATC	8 cut(s)	373, 418, 749, 767, 832, 849, 1124, 1140
BstMAI	GTCTC	3 cut(s)	17, 813, 874
BstMBI	GATC	8 cut(s)	370, 415, 746, 764, 829, 846, 1121, 1137
BstMWI	GCNNNNNNNGC	1 cut(s)	1050
BstNI	CCWGG	2 cut(s)	120, 310
BstSCI	CCNGG	2 cut(s)	118, 308
BstSFI	CTRYAG	2 cut(s)	358, 469
BstUI	CGCG	1 cut(s)	451
BstV1I	GCAGC	3 cut(s)	384, 616, 1057
BstV2I	GAAGAC	2 cut(s)	351, 502
BstX2I	RGATCY	5 cut(s)	415, 746, 764, 829, 1121
BstYI	RGATCY	5 cut(s)	415, 746, 764, 829, 1121
BsuRI	GGCC	2 cut(s)	505, 951
BtgI	CCRYGG	1 cut(s)	366
BtgZI	GCGATG	1 cut(s)	477
BtsCI	GGATG	1 cut(s)	695
BtsI	GCAGTG	1 cut(s)	858
BtsIMutI	CAGTG	2 cut(s)	736, 858
Cac8I	GCNNGC	2 cut(s)	453, 904
CciI	TCATGA	1 cut(s)	1009
CfoI	GCGC	2 cut(s)	451, 614
Cfr10I	RCCGGY	2 cut(s)	149, 693
CseI	GACGC	1 cut(s)	231
Csp6I	GTAC	2 cut(s)	313, 941
CviAII	CATG	3 cut(s)	393, 517, 1010
CviQI	GTAC	2 cut(s)	313, 941
DdeI	CTNAG	2 cut(s)	545, 1087
DpnI	GATC	8 cut(s)	372, 417, 748, 766, 831, 848, 1123, 1139
DpnII	GATC	8 cut(s)	370, 415, 746, 764, 829, 846, 1121, 1137
DraI	TTTAAA	1 cut(s)	277
EaeI	YGGCCR	1 cut(s)	503
Eco130I	CCWWGG	2 cut(s)	241, 655
Eco57I	CTGAAG	1 cut(s)	422
Eco88I	CYCGRG	1 cut(s)	102
EcoNI	CCTNNNNNAGG	1 cut(s)	245
EcoRII	CCWGG	2 cut(s)	118, 308
EcoT14I	CCWWGG	2 cut(s)	241, 655
ErhI	CCWWGG	2 cut(s)	241, 655
Esp3I	CGTCTC	1 cut(s)	813
FaeI	CATG	3 cut(s)	396, 520, 1013
FatI	CATG	3 cut(s)	392, 516, 1009
Fnu4HI	GCNGC	3 cut(s)	398, 630, 1071
FokI	GGATG	1 cut(s)	702
Fsp4HI	GCNGC	3 cut(s)	398, 630, 1071
FspBI	CTAG	8 cut(s)	6, 131, 242, 570, 615, 750, 768, 1141
GlaI	GCGC	2 cut(s)	450, 613
GluI	GCNGC	3 cut(s)	398, 630, 1071
HaeII	RGCGCY	1 cut(s)	615
HaeIII	GGCC	2 cut(s)	505, 951
HapII	CCGG	4 cut(s)	51, 150, 502, 694
HgaI	GACGC	1 cut(s)	231
HhaI	GCGC	2 cut(s)	451, 614
Hin1I	GRCGYC	1 cut(s)	223
Hin1II	CATG	3 cut(s)	396, 520, 1013
Hin6I	GCGC	2 cut(s)	449, 612
HinP1I	GCGC	2 cut(s)	449, 612
HindIII	AAGCTT	1 cut(s)	552
HinfI	GANTC	6 cut(s)	47, 92, 270, 347, 498, 735
HpaII	CCGG	4 cut(s)	51, 150, 502, 694
HphI	GGTGA	9 cut(s)	7, 28, 168, 257, 297, 313, 346, 901, 1118
Hpy166II	GTNNAC	1 cut(s)	139
Hpy188I	TCNGA	3 cut(s)	72, 85, 1090
Hpy188III	TCNNGA	5 cut(s)	744, 783, 850, 971, 1010
Hpy8I	GTNNAC	1 cut(s)	139
Hpy99I	CGWCG	1 cut(s)	225
HpyAV	CCTTC	3 cut(s)	397, 924, 1103
HpyCH4III	ACNGT	3 cut(s)	367, 560, 713
HpyCH4IV	ACGT	1 cut(s)	838
HpyCH4V	TGCA	4 cut(s)	232, 516, 624, 707
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1050
HpyF3I	CTNAG	2 cut(s)	545, 1087
HpySE526I	ACGT	1 cut(s)	838
Hsp92I	GRCGYC	1 cut(s)	223
Hsp92II	CATG	3 cut(s)	396, 520, 1013
HspAI	GCGC	2 cut(s)	449, 612
Kzo9I	GATC	8 cut(s)	370, 415, 746, 764, 829, 846, 1121, 1137
LmnI	GCTCC	3 cut(s)	103, 211, 959
Lsp1109I	GCAGC	3 cut(s)	384, 616, 1057
LweI	GCATC	1 cut(s)	680
MaeI	CTAG	8 cut(s)	6, 131, 242, 570, 615, 750, 768, 1141
MaeII	ACGT	1 cut(s)	838
MaeIII	GTNAC	1 cut(s)	162
MalI	GATC	8 cut(s)	372, 417, 748, 766, 831, 848, 1123, 1139
MboI	GATC	8 cut(s)	370, 415, 746, 764, 829, 846, 1121, 1137
MboII	GAAGA	3 cut(s)	356, 507, 933
MfeI	CAATTG	1 cut(s)	227
MflI	RGATCY	5 cut(s)	415, 746, 764, 829, 1121
MhlI	GDGCHC	1 cut(s)	216
MluCI	AATT	4 cut(s)	227, 316, 716, 975
MlyI	GAGTC	4 cut(s)	41, 279, 341, 492
MmeI	TCCRAC	1 cut(s)	24
MnlI	CCTC	4 cut(s)	98, 111, 241, 279
MseI	TTAA	5 cut(s)	60, 276, 675, 788, 822
MslI	CAYNNNNRTG	1 cut(s)	1014
MspA1I	CMGCKG	2 cut(s)	544, 686
MspI	CCGG	4 cut(s)	51, 150, 502, 694
MspR9I	CCNGG	2 cut(s)	120, 310
MunI	CAATTG	1 cut(s)	227
Mva1269I	GAATGC	1 cut(s)	656
MvaI	CCWGG	2 cut(s)	120, 310
MvnI	CGCG	1 cut(s)	451
MwoI	GCNNNNNNNGC	1 cut(s)	1050
NdeII	GATC	8 cut(s)	370, 415, 746, 764, 829, 846, 1121, 1137
NlaIII	CATG	3 cut(s)	396, 520, 1013
NlaIV	GGNNCC	3 cut(s)	55, 99, 488
NmuCI	GTSAC	1 cut(s)	162
NspV	TTCGAA	1 cut(s)	291
PaeR7I	CTCGAG	1 cut(s)	102
PagI	TCATGA	1 cut(s)	1009
PctI	GAATGC	1 cut(s)	656
PfeI	GAWTC	2 cut(s)	92, 735
PkrI	GCNGC	3 cut(s)	399, 631, 1072
PleI	GAGTC	4 cut(s)	41, 278, 341, 492
PpsI	GAGTC	4 cut(s)	41, 278, 341, 492
Ppu21I	YACGTR	1 cut(s)	839
PshBI	ATTAAT	2 cut(s)	675, 788
Psp6I	CCWGG	2 cut(s)	118, 308
PspGI	CCWGG	2 cut(s)	118, 308
PspN4I	GGNNCC	3 cut(s)	55, 99, 488
PspXI	VCTCGAGB	1 cut(s)	102
PsuI	RGATCY	5 cut(s)	415, 746, 764, 829, 1121
PvuII	CAGCTG	2 cut(s)	544, 686
RsaI	GTAC	2 cut(s)	314, 942
RsaNI	GTAC	2 cut(s)	313, 941
RseI	CAYNNNNRTG	1 cut(s)	1014
SaqAI	TTAA	5 cut(s)	60, 276, 675, 788, 822
SatI	GCNGC	3 cut(s)	398, 630, 1071
Sau3AI	GATC	8 cut(s)	370, 415, 746, 764, 829, 846, 1121, 1137
SchI	GAGTC	4 cut(s)	41, 279, 341, 492
ScrFI	CCNGG	2 cut(s)	120, 310
SduI	GDGCHC	1 cut(s)	216
SfaNI	GCATC	1 cut(s)	680
SfcI	CTRYAG	2 cut(s)	358, 469
Sfr274I	CTCGAG	1 cut(s)	102
SfuI	TTCGAA	1 cut(s)	291
SlaI	CTCGAG	1 cut(s)	102
SmiMI	CAYNNNNRTG	1 cut(s)	1014
SmlI	CTYRAG	1 cut(s)	102
SmoI	CTYRAG	1 cut(s)	102
SpeI	ACTAGT	1 cut(s)	569
Sse9I	AATT	4 cut(s)	227, 316, 716, 975
SspMI	CTAG	8 cut(s)	6, 131, 242, 570, 615, 750, 768, 1141
StyD4I	CCNGG	2 cut(s)	118, 308
StyI	CCWWGG	2 cut(s)	241, 655
TaaI	ACNGT	3 cut(s)	367, 560, 713
TaiI	ACGT	1 cut(s)	841
TaqI	TCGA	2 cut(s)	103, 291
TasI	AATT	4 cut(s)	227, 316, 716, 975
TatI	WGTACW	1 cut(s)	940
TfiI	GAWTC	2 cut(s)	92, 735
Tru1I	TTAA	5 cut(s)	60, 276, 675, 788, 822
Tru9I	TTAA	5 cut(s)	60, 276, 675, 788, 822
TscAI	CASTG	2 cut(s)	736, 865
TseFI	GTSAC	1 cut(s)	162
TseI	GCWGC	3 cut(s)	397, 629, 1070
Tsp45I	GTSAC	1 cut(s)	162
TspDTI	ATGAA	4 cut(s)	16, 159, 1004, 1026
TspRI	CASTG	2 cut(s)	736, 865
VspI	ATTAAT	2 cut(s)	675, 788
XagI	CCTNNNNNAGG	1 cut(s)	245
XapI	RAATTY	1 cut(s)	975
XhoI	CTCGAG	1 cut(s)	102
XmaJI	CCTAGG	1 cut(s)	241
XspI	CTAG	8 cut(s)	6, 131, 242, 570, 615, 750, 768, 1141

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.