Rroxscaffold_1G00054110

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
75420711 .. 75423343
2633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00054110.1

Sequence Viewer

Length: 1857 bp
ATGGCTAATGCGATGATCATGTTTGCTGGTTTTCAAGAACATCAGGAGAAAGCAAAGTACCTTCTGATCATCAACCATGGTTGTAGGTTTGATCAACTCTTAATTTTCTTCCTGATCATTCTTTCAAGCTTGTGGAATTGTCATGTTGCTGCTGCAGCAGACAATATTGGGGACACACTCAAAATAGGCGACACTCTCAATTCCTCAAGCGCTTTAGTTTCCACCACTGGGAAGTTCACTTTGCTTTTCTTGTCCCTCAGTTCAAGTTCCAACTACAGCTATCTATATATTAGCCGGTACAATGTAACTGGTGCGAATAAGGCTTGGGTTGGCAACCGAGACTCGCCTGTTTTATACCCTTTTGGAGTTCTTACCTTGGACTCCAACAACACATTAAAAATCATTACAAACAACGAAGGTGGCGGTGGCGATCCTCCTATAGTGCTTGGCTCCGCGCCAAAAAGTAGTAGTAATGTTGCGGCTACTCTGTTGGATTCTGGCAATTTTATCCTACAAGAGTTGAACTCCGATGGATCAACGAAGCAGGTGTGGTGGCAAAGTTTTGATTATCCAGCAGATACCTTTTTACCAGGCATGAAGTTAGGTGTCAACCGTAGCAATGGGCATATTTGGTCTCTTACGTCATGGACATCCGTTAACTACCCACCGCCGGGGCCTTTCATCCTAGATTGGGACCCAACTGCCCGCCAATTGGAAATTCGGAGAGAAGGGGTGATTTATTGGAGAAGCGGAAACTATAGTGCTACAAACAACAGATTCCAAAACATTTTGCCGAATGCAAAGGTTAGCTACAAGTTTAGCATTGTTTCAAATGAGAATGAAGACTACCTCACTTACACTTCTGAAGACGGTGCATATGAGTTACCAGAATGGATTCTAAATTATTATGGGAAGCTTTTTAATTATTATGGATCGGGAATTGATATTGCACGAGCAGATCAGTGTGGAGGCTACAACACAGATGGAGTAGGGTGCCAGACAACTGGCCGGCCAACTACTTGTATGGCGGATTTCGGCAGTCCATTTGGGCTAAAAAAAGGTTCCTTTAAACCAATCACCTCAAGTTCAGCTTCAAGATGCCCATACTCGCTCAACTTTGTATCAAATGGAAGTCACAGTGGTACTAGTATTGACTGTAACAATACTTGTTTGCAAAACTGTGACTGCCTTGGATTCGACTTTCTATTTGATAATCAGACTGGATGCCGATTTTGGAGTGTGGACTGTGAGTTCGTTGAAGACCGCACTCAACCTGGTAATGCAAGCAATTTGGTTTTGACAAAGCTAATGCCAACAGCAAAATCAGCACCAAGCAAAAGTGGTGAGGGTATCCACCAGGATCAATTGCTCAACTTCAAGAGGCCTACTGATTTGAATGTACTTCAAAATGATGGAAAGATGGGACATGATTTGAGCGTATTTAGCTATGCATCTGGGAAATTGGCAACGGGACTAGAAATAGCTGTGAAGAGGCTTTCAAAATGTTCAGGGCAAGGAACACTAGAGTTTAAGAATGAATTGAACCTCATACATGAACTTCAACATACAAACCTTGTCCAGCTTTTGGATTTTGCATTCACGGTGAAGAGAGGATATTCAATCAGAGGTGTTTTTCTGGATTGGAGCAAGCGTTTCAGCATAATTGAAGGAATCGCTCAAGGATTGCTTTATTTGCACAAATTCTCAAGAACAAGAGTAGTTCATAGAGATCTAAAAGCTAGTAACGTACTACTTGATGAAAATATGAACCCCAAAATTTCAGATTTTGGTATGGCAAGGATTTTCTCCATTAATGATCTGGAAGCAAATACTAGTAGGATTGTTGGGACACGGTAA

Protein Analysis

618

Amino Acids

68.39

Weight (kDa)

6.6

Isoelectric Point (pI)

32.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 109 - 216 5.8e-24 D-mannose binding lectin
Pkinase PF00069 488 - 617 4.4e-15 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 548 - 604 4e-11 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 535
Acc36I ACCTGC 1 cut(s) 535
AccB1I GGYRCC 1 cut(s) 993
AccB7I CCANNNNNTGG 1 cut(s) 1585
AccII CGCG 1 cut(s) 455
AciI CCGC 8 cut(s) 423, 453, 479, 668, 706, 750, 1028, 1264
AclWI GGATC 4 cut(s) 425, 541, 940, 1368
AcoI YGGCCR 2 cut(s) 1006, 1010
AcsI RAATTY 3 cut(s) 717, 1700, 1776
AcuI CTGAAG 1 cut(s) 885
AfaI GTAC 5 cut(s) 59, 299, 1144, 1401, 1749
AfeI AGCGCT 1 cut(s) 211
AfiI CCNNNNNNNGG 6 cut(s) 228, 670, 671, 691, 712, 1585
AhlI ACTAGT 2 cut(s) 1145, 1832
AjnI CCWGG 3 cut(s) 589, 1273, 1356
AjuI GAANNNNNNNTTGG 2 cut(s) 702, 734
AloI GAACNNNNNNTCC 2 cut(s) 1235, 1267
Alw26I GTCTC 2 cut(s) 333, 639
AlwI GGATC 4 cut(s) 425, 541, 940, 1368
Aor51HI AGCGCT 1 cut(s) 211
AoxI GGCC 4 cut(s) 674, 1006, 1010, 1382
ApeKI GCWGC 3 cut(s) 149, 152, 155
ApoI RAATTY 3 cut(s) 717, 1700, 1776
ArsI GACNNNNNNTTYG 4 cut(s) 1190, 1222, 1235, 1267
AseI ATTAAT 1 cut(s) 1812
Asp700I GAANNNNTTC 1 cut(s) 894
AspLEI GCGC 2 cut(s) 212, 457
AspS9I GGNCC 2 cut(s) 674, 694
AsuC2I CCSGG 1 cut(s) 672
AsuHPI GGTGA 4 cut(s) 745, 1069, 1355, 1615
AvaII GGWCC 1 cut(s) 694
BanI GGYRCC 1 cut(s) 993
BauI CACGAG 1 cut(s) 951
BbsI GAAGAC 3 cut(s) 849, 873, 1266
BbvI GCAGC 3 cut(s) 136, 139, 167
BccI CCATC 4 cut(s) 524, 977, 1406, 1414
BciT130I CCWGG 3 cut(s) 591, 1275, 1358
BciVI GTATCC 1 cut(s) 1361
BclI TGATCA 4 cut(s) 15, 66, 91, 114
BcnI CCSGG 1 cut(s) 672
BcoDI GTCTC 2 cut(s) 333, 639
BcuI ACTAGT 2 cut(s) 1145, 1832
BfaI CTAG 6 cut(s) 686, 1146, 1475, 1523, 1740, 1833
BfmI CTRYAG 4 cut(s) 153, 274, 438, 757
BfoI RGCGCY 1 cut(s) 213
BfuAI ACCTGC 1 cut(s) 535
BfuI GTATCC 1 cut(s) 1361
BglII AGATCT 1 cut(s) 1729
BisI GCNGC 4 cut(s) 150, 153, 156, 480
BlsI GCNGC 4 cut(s) 151, 154, 157, 481
Bme1390I CCNGG 4 cut(s) 591, 672, 1275, 1358
Bme18I GGWCC 1 cut(s) 694
BmgT120I GGNCC 2 cut(s) 674, 694
BmiI GGNNCC 6 cut(s) 451, 675, 695, 696, 995, 1063
BmrFI CCNGG 4 cut(s) 591, 672, 1275, 1358
BmrI ACTGGG 1 cut(s) 237
BmsI GCATC 3 cut(s) 1088, 1214, 1460
BmuI ACTGGG 1 cut(s) 237
BpiI GAAGAC 3 cut(s) 849, 873, 1266
BplI GAGNNNNNCTC 2 cut(s) 509, 541
BpuEI CTTGAG 4 cut(s) 190, 1066, 1662, 1690
BpuMI CCSGG 1 cut(s) 672
BsaI GGTCTC 1 cut(s) 639
BsaJI CCNNGG 4 cut(s) 76, 375, 671, 1189
BsaXI ACNNNNNCTCC 2 cut(s) 1636, 1666
Bsc4I CCNNNNNNNGG 6 cut(s) 228, 670, 671, 691, 712, 1585
Bse118I RCCGGY 2 cut(s) 294, 1008
Bse1I ACTGG 4 cut(s) 232, 313, 1009, 1225
Bse3DI GCAATG 1 cut(s) 625
BseBI CCWGG 3 cut(s) 591, 1275, 1358
BseDI CCNNGG 4 cut(s) 76, 375, 671, 1189
BseGI GGATG 3 cut(s) 650, 681, 1229
BseLI CCNNNNNNNGG 6 cut(s) 228, 670, 671, 691, 712, 1585
BseMI GCAATG 1 cut(s) 625
BseMII CTCAG 1 cut(s) 271
BseNI ACTGG 4 cut(s) 232, 313, 1009, 1225
BseXI GCAGC 3 cut(s) 136, 139, 167
Bsh1236I CGCG 1 cut(s) 455
BshFI GGCC 4 cut(s) 676, 1008, 1012, 1384
BshNI GGYRCC 1 cut(s) 993
BsiSI CCGG 3 cut(s) 295, 671, 1009
BslFI GGGAC 5 cut(s) 185, 238, 707, 1437, 1485
BslI CCNNNNNNNGG 6 cut(s) 228, 670, 671, 691, 712, 1585
BsmAI GTCTC 2 cut(s) 333, 639
BsmFI GGGAC 5 cut(s) 185, 238, 707, 1437, 1485
BsmI GAATGC 2 cut(s) 802, 1595
BsnI GGCC 4 cut(s) 676, 1008, 1012, 1384
Bso31I GGTCTC 1 cut(s) 639
Bsp19I CCATGG 1 cut(s) 76
BspACI CCGC 8 cut(s) 423, 453, 479, 668, 706, 750, 1028, 1264
BspANI GGCC 4 cut(s) 676, 1008, 1012, 1384
BspCNI CTCAG 1 cut(s) 270
BspFNI CGCG 1 cut(s) 455
BspLI GGNNCC 6 cut(s) 451, 675, 695, 696, 995, 1063
BspMAI CTGCAG 1 cut(s) 157
BspMI ACCTGC 1 cut(s) 535
BspPI GGATC 4 cut(s) 425, 541, 940, 1368
BspT107I GGYRCC 1 cut(s) 993
BspTNI GGTCTC 1 cut(s) 639
BsrDI GCAATG 1 cut(s) 625
BsrFI RCCGGY 2 cut(s) 294, 1008
BsrI ACTGG 4 cut(s) 232, 313, 1009, 1225
BssAI RCCGGY 2 cut(s) 294, 1008
BssECI CCNNGG 4 cut(s) 76, 375, 671, 1189
BssSI CACGAG 1 cut(s) 951
BssT1I CCWWGG 3 cut(s) 76, 375, 1189
Bst2BI CACGAG 1 cut(s) 951
Bst2UI CCWGG 3 cut(s) 591, 1275, 1358
Bst4CI ACNGT 8 cut(s) 614, 872, 1139, 1157, 1181, 1247, 1603, 1854
Bst6I CTCTTC 2 cut(s) 1484, 1601
BstC8I GCNNGC 4 cut(s) 706, 1010, 1285, 1649
BstDEI CTNAG 1 cut(s) 257
BstDSI CCRYGG 1 cut(s) 76
BstF5I GGATG 3 cut(s) 650, 681, 1229
BstFNI CGCG 1 cut(s) 455
BstH2I RGCGCY 1 cut(s) 213
BstHHI GCGC 2 cut(s) 212, 457
BstMAI GTCTC 2 cut(s) 333, 639
BstMWI GCNNNNNNNGC 5 cut(s) 155, 320, 1325, 1443, 1693
BstNI CCWGG 3 cut(s) 591, 1275, 1358
BstSCI CCNGG 4 cut(s) 589, 670, 1273, 1356
BstSFI CTRYAG 4 cut(s) 153, 274, 438, 757
BstUI CGCG 1 cut(s) 455
BstV1I GCAGC 3 cut(s) 136, 139, 167
BstV2I GAAGAC 3 cut(s) 849, 873, 1266
BstX2I RGATCY 1 cut(s) 1729
BstXI CCANNNNNNTGG 1 cut(s) 1004
BstYI RGATCY 1 cut(s) 1729
BsuI GTATCC 1 cut(s) 1361
BsuRI GGCC 4 cut(s) 676, 1008, 1012, 1384
BtgI CCRYGG 1 cut(s) 76
BtgZI GCGATG 1 cut(s) 26
BtsCI GGATG 3 cut(s) 650, 681, 1229
BtsIMutI CAGTG 3 cut(s) 225, 968, 1144
BveI ACCTGC 1 cut(s) 535
Cac8I GCNNGC 4 cut(s) 706, 1010, 1285, 1649
CfoI GCGC 2 cut(s) 212, 457
Cfr10I RCCGGY 2 cut(s) 294, 1008
Cfr13I GGNCC 2 cut(s) 674, 694
CsiI ACCWGGT 1 cut(s) 1273
Csp6I GTAC 5 cut(s) 58, 298, 1143, 1400, 1748
CspCI CAANNNNNGTGG 2 cut(s) 400, 435
CviAII CATG 7 cut(s) 19, 77, 143, 595, 645, 1427, 1553
CviQI GTAC 5 cut(s) 58, 298, 1143, 1400, 1748
DdeI CTNAG 1 cut(s) 257
DraI TTTAAA 1 cut(s) 1069
EaeI YGGCCR 2 cut(s) 1006, 1010
Eam1104I CTCTTC 2 cut(s) 1484, 1601
EarI CTCTTC 2 cut(s) 1484, 1601
EciI GGCGGA 1 cut(s) 1043
Eco130I CCWWGG 3 cut(s) 76, 375, 1189
Eco147I AGGCCT 1 cut(s) 1384
Eco31I GGTCTC 1 cut(s) 639
Eco47I GGWCC 1 cut(s) 694
Eco47III AGCGCT 1 cut(s) 211
Eco57I CTGAAG 1 cut(s) 885
EcoO109I RGGNCCY 2 cut(s) 674, 694
EcoRII CCWGG 3 cut(s) 589, 1273, 1356
EcoT14I CCWWGG 3 cut(s) 76, 375, 1189
EcoT22I ATGCAT 1 cut(s) 1453
ErhI CCWWGG 3 cut(s) 76, 375, 1189
FaeI CATG 7 cut(s) 22, 80, 146, 598, 648, 1430, 1556
FalI AAGNNNNNCTT 4 cut(s) 1075, 1107, 1671, 1703
FaqI GGGAC 5 cut(s) 185, 238, 707, 1437, 1485
FatI CATG 7 cut(s) 18, 76, 142, 594, 644, 1426, 1552
FauI CCCGC 1 cut(s) 713
FauNDI CATATG 1 cut(s) 877
FbaI TGATCA 4 cut(s) 15, 66, 91, 114
Fnu4HI GCNGC 4 cut(s) 150, 153, 156, 480
FokI GGATG 3 cut(s) 637, 668, 1236
FseI GGCCGGCC 1 cut(s) 1012
Fsp4HI GCNGC 4 cut(s) 150, 153, 156, 480
FspBI CTAG 6 cut(s) 686, 1146, 1475, 1523, 1740, 1833
GlaI GCGC 2 cut(s) 211, 456
GluI GCNGC 4 cut(s) 150, 153, 156, 480
HaeII RGCGCY 1 cut(s) 213
HaeIII GGCC 4 cut(s) 676, 1008, 1012, 1384
HapII CCGG 3 cut(s) 295, 671, 1009
HhaI GCGC 2 cut(s) 212, 457
Hin1II CATG 7 cut(s) 22, 80, 146, 598, 648, 1430, 1556
Hin6I GCGC 2 cut(s) 210, 455
HinP1I GCGC 2 cut(s) 210, 455
HincII GTYRAC 2 cut(s) 610, 658
HindII GTYRAC 2 cut(s) 610, 658
HindIII AAGCTT 2 cut(s) 127, 914
HinfI GANTC 7 cut(s) 341, 380, 494, 777, 895, 1194, 1671
HpaI GTTAAC 1 cut(s) 658
HpaII CCGG 3 cut(s) 295, 671, 1009
HphI GGTGA 4 cut(s) 745, 1069, 1355, 1615
Hpy166II GTNNAC 4 cut(s) 237, 610, 658, 1243
Hpy188I TCNGA 7 cut(s) 66, 529, 723, 865, 1218, 1625, 1783
Hpy188III TCNNGA 9 cut(s) 35, 44, 112, 936, 1095, 1378, 1637, 1707, 1820
Hpy8I GTNNAC 4 cut(s) 237, 610, 658, 1243
HpyAV CCTTC 4 cut(s) 71, 410, 722, 1661
HpyCH4III ACNGT 8 cut(s) 614, 872, 1139, 1157, 1181, 1247, 1603, 1854
HpyCH4IV ACGT 2 cut(s) 641, 1746
HpyCH4V TGCA 9 cut(s) 155, 800, 875, 950, 1174, 1283, 1451, 1595, 1696
HpyF10VI GCNNNNNNNGC 5 cut(s) 155, 320, 1325, 1443, 1693
HpyF3I CTNAG 1 cut(s) 257
HpySE526I ACGT 2 cut(s) 641, 1746
Hsp92II CATG 7 cut(s) 22, 80, 146, 598, 648, 1430, 1556
HspAI GCGC 2 cut(s) 210, 455
KflI GGGWCCC 1 cut(s) 694
KroI GCCGGC 1 cut(s) 1008
KroNI GCCGGC 1 cut(s) 1010
Ksp22I TGATCA 4 cut(s) 15, 66, 91, 114
KspAI GTTAAC 1 cut(s) 658
LmnI GCTCC 2 cut(s) 455, 1644
Lsp1109I GCAGC 3 cut(s) 136, 139, 167
LweI GCATC 3 cut(s) 1088, 1214, 1460
MabI ACCWGGT 1 cut(s) 1273
MaeI CTAG 6 cut(s) 686, 1146, 1475, 1523, 1740, 1833
MaeII ACGT 2 cut(s) 641, 1746
MaeIII GTNAC 6 cut(s) 304, 882, 1133, 1157, 1181, 1742
MboII GAAGA 6 cut(s) 100, 854, 878, 1271, 1501, 1618
MfeI CAATTG 2 cut(s) 710, 1364
MflI RGATCY 1 cut(s) 1729
MlyI GAGTC 2 cut(s) 335, 374
MmeI TCCRAC 3 cut(s) 294, 408, 471
Mph1103I ATGCAT 1 cut(s) 1453
MroNI GCCGGC 1 cut(s) 1008
MroXI GAANNNNTTC 1 cut(s) 894
MseI TTAA 7 cut(s) 101, 395, 657, 921, 1068, 1530, 1812
MspI CCGG 3 cut(s) 295, 671, 1009
MspR9I CCNGG 4 cut(s) 591, 672, 1275, 1358
MunI CAATTG 2 cut(s) 710, 1364
Mva1269I GAATGC 2 cut(s) 802, 1595
MvaI CCWGG 3 cut(s) 591, 1275, 1358
MvnI CGCG 1 cut(s) 455
MwoI GCNNNNNNNGC 5 cut(s) 155, 320, 1325, 1443, 1693
NaeI GCCGGC 1 cut(s) 1010
NciI CCSGG 1 cut(s) 672
NcoI CCATGG 1 cut(s) 76
NdeI CATATG 1 cut(s) 877
NgoMIV GCCGGC 1 cut(s) 1008
NlaIII CATG 7 cut(s) 22, 80, 146, 598, 648, 1430, 1556
NlaIV GGNNCC 6 cut(s) 451, 675, 695, 696, 995, 1063
NmuCI GTSAC 2 cut(s) 1133, 1181
NsiI ATGCAT 1 cut(s) 1453
PaqCI CACCTGC 1 cut(s) 535
PceI AGGCCT 1 cut(s) 1384
PctI GAATGC 2 cut(s) 802, 1595
PdiI GCCGGC 1 cut(s) 1010
PdmI GAANNNNTTC 1 cut(s) 894
PfeI GAWTC 5 cut(s) 494, 777, 895, 1194, 1671
PflMI CCANNNNNTGG 1 cut(s) 1585
PkrI GCNGC 4 cut(s) 151, 154, 157, 481
PleI GAGTC 2 cut(s) 335, 374
PpsI GAGTC 2 cut(s) 335, 374
PpuMI RGGWCCY 1 cut(s) 694
PshBI ATTAAT 1 cut(s) 1812
Psp5II RGGWCCY 1 cut(s) 694
Psp6I CCWGG 3 cut(s) 589, 1273, 1356
PspGI CCWGG 3 cut(s) 589, 1273, 1356
PspN4I GGNNCC 6 cut(s) 451, 675, 695, 696, 995, 1063
PspPI GGNCC 2 cut(s) 674, 694
PspPPI RGGWCCY 1 cut(s) 694
PstI CTGCAG 1 cut(s) 157
PsuI RGATCY 1 cut(s) 1729
RigI GGCCGGCC 1 cut(s) 1012
RsaI GTAC 5 cut(s) 59, 299, 1144, 1401, 1749
RsaNI GTAC 5 cut(s) 58, 298, 1143, 1400, 1748
SaqAI TTAA 7 cut(s) 101, 395, 657, 921, 1068, 1530, 1812
SatI GCNGC 4 cut(s) 150, 153, 156, 480
Sau96I GGNCC 2 cut(s) 674, 694
SchI GAGTC 2 cut(s) 335, 374
ScrFI CCNGG 4 cut(s) 591, 672, 1275, 1358
SexAI ACCWGGT 1 cut(s) 1273
SfaNI GCATC 3 cut(s) 1088, 1214, 1460
SfcI CTRYAG 4 cut(s) 153, 274, 438, 757
SinI GGWCC 1 cut(s) 694
SmlI CTYRAG 4 cut(s) 205, 1081, 1677, 1705
SmoI CTYRAG 4 cut(s) 205, 1081, 1677, 1705
SpeI ACTAGT 2 cut(s) 1145, 1832
SseBI AGGCCT 1 cut(s) 1384
SsiI CCGC 8 cut(s) 423, 453, 479, 668, 706, 750, 1028, 1264
SspI AATATT 1 cut(s) 166
SspMI CTAG 6 cut(s) 686, 1146, 1475, 1523, 1740, 1833
StuI AGGCCT 1 cut(s) 1384
StyD4I CCNGG 4 cut(s) 589, 670, 1273, 1356
StyI CCWWGG 3 cut(s) 76, 375, 1189
TaaI ACNGT 8 cut(s) 614, 872, 1139, 1157, 1181, 1247, 1603, 1854
TaiI ACGT 2 cut(s) 644, 1749
TaqI TCGA 1 cut(s) 1197
TatI WGTACW 1 cut(s) 1399
TauI GCSGC 1 cut(s) 482
TfiI GAWTC 5 cut(s) 494, 777, 895, 1194, 1671
Tru1I TTAA 7 cut(s) 101, 395, 657, 921, 1068, 1530, 1812
Tru9I TTAA 7 cut(s) 101, 395, 657, 921, 1068, 1530, 1812
TscAI CASTG 3 cut(s) 232, 968, 1144
TseFI GTSAC 2 cut(s) 1133, 1181
TseI GCWGC 3 cut(s) 149, 152, 155
Tsp45I GTSAC 2 cut(s) 1133, 1181
TspDTI ATGAA 8 cut(s) 611, 670, 855, 1551, 1569, 1712, 1773, 1781
TspGWI ACGGA 1 cut(s) 643
TspRI CASTG 3 cut(s) 232, 968, 1144
Van91I CCANNNNNTGG 1 cut(s) 1585
VpaK11BI GGWCC 1 cut(s) 694
VspI ATTAAT 1 cut(s) 1812
XapI RAATTY 3 cut(s) 717, 1700, 1776
XcmI CCANNNNNNNNNTGG 1 cut(s) 1816
XmnI GAANNNNTTC 1 cut(s) 894
XspI CTAG 6 cut(s) 686, 1146, 1475, 1523, 1740, 1833
Zsp2I ATGCAT 1 cut(s) 1453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.