Rw5G016120

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
20170046 .. 20173244
3199 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G016120.1

Sequence Viewer

Length: 2043 bp
ATGGCTAGAAGTCTCACCTTGATTTTCATTCTCATCACCCTGTTGGACTCCGGCACCTTTAACCTTATTCAGAGAGTGAAGTCCGATGATGATTCGGCTCCTCCAGGAACATTTCTGCCAGGCAAGAAGCTAGGTGTGAACCATAGAACCGGCTACATCTGGTCACTTTCATCATCACCAAGTCCTTTGGGTTCTTTCACACTTTCTTGGGAGCACAAACGACGCCAATTGCTTATTAGCCTAGGTGAGGTGGTTTATTGGAGTAGTGGAGTCTTTAAAGATGGGAGGTTCGAATATATATCATCACCCAGGTACAATTTCACCATCGTTTCAAATAAAACAGAAGACTCCATCACCTACAGCACCGTGGATCATACTGATAAAGTGTCAGCATGGCTGCTGACGGACACGGGGGATCTGTATGATACTTATACAAGAGATGACATTGCGCGAGCAGACTGCGATGGCTATAGCACCGAGAAAGGGTGCCATAGAAGACTCCGGCCAAGTAGTTGCATGGCGACATTTGGGGTTGAGTTTCAGCTGAGAAAAGCTTACTGTCATTCAACTAGTGAAAGAACCCCATATTATTTTAGGAATGTAAGTAATGGCACTAGTGAGTGCAAGGCTGCTTGTTGGCAAGATTGTGAATGCCTTGGCTTTGACATTGCGATTAATCAAACAGCTGGATGCCGGTTTTGGAGTGCAGACTGTCAATTTGATAAAGTCAGTGGATTCAGTTCTGGATCGAGTTTCGGTTCTGGATCTAGTTTTGTGCTGTCAAGATTAATCCCTTTACAACCATCGTCTCCCAGAAGTATTAAACAAGATCCAGCACGTAGGTTGATCTGGATTGGTACTGCTGTTGTCTCTGCTCTACTGGTAATGGTGAGTTTGTTCGCCTGCTATCTACTAATAAGAAGAATAGGAAGGAAATTAGTACATTCAGGCCGAAATGGGGCAAAGGTTCAGGAAATTCTTACCTTGATGAAACCTAATATACCTACTCATGAAAATGATGGAAAGATAGGAAATGATATAAGCGTTTTTAGCTACACATCTGTTCTGGCTGCTACACGCAACTTCTCAAACGAAAACAAGCTCGGTGAAGGGGGGTTTGGATCTGTTTATCAGGGAAAATTGGTGACGGGACAAGAAATAGCCGTAAAGAAGCTTTCCAAAAATTCAGAGCAAGGCGCTCTAGAGTTTAAGAATGAATTGATACTCGTATATGAACTCCAGCATACCAACCTTGTTCGACTTTTTGGATTTTGCATTCGTGGTGAAGAGAGGATGTTGATATATGAGTACATGCCAAACAAAAGTCTGGACTACTTTTTGTTTGATTCAACCAGAGGTGTGCTACTCAATTGGAAAAGGCGTTTCAACATAATTGAAGGAGTCGCTCAAGGATTGCTTTACTTGCACAAATACTCCAGAATGAGAGTGATTCATAGAGATTTGAAGGCCAGTAATATTCTACTCGATGAAAGCATGAATCCAAGAATTTCTGATTTTGGTATGGCAAGGACTTTTACACAAAATGAACTAGAAGCAAATACTAAGAGGATTGTCGGGACATATGGTTACATGTCTCCTGAGTATGTCTTTGGGGGGAACTTCTCTATAAAGTCCGATGTGTACAGTTTTGGAGTCTTAATGCTTGAAATCATCAGTGGTAGGAGAAACAACAGCTTCTACAATGATGATCGCGTGCTCACTTTAGCAGGATATACATGGGAGCTATGGAAAAAAGATGCAGCGCTGGAACTAATGGATCCAACACTAGGCAATTCCTGTGATGAGGATGTATTGTTAAGATGCATCCATGTCGGTCTGCTCTGTGTGGAAGAGAATGCAACCGATCGGCCGAACATGTCAGATCTCATATCTATGTTGACAAATGAAAGCGTGCCTTTACCTAAACCAACAAAGCCAGCATTTTGTACAAGGAGAAATGTGATCACGTCTGGTATAGATAGGAAGGGGCCAGAACTTGAATCTATAAATGGTCTGTCCATTTCTGATTTTGCTGCCCGTTAA

Protein Analysis

680

Amino Acids

76.43

Weight (kDa)

8.44

Isoelectric Point (pI)

45.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 363 - 562 7.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 365 - 633 1.4e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 53, 486
AccII CGCG 2 cut(s) 451, 1713
AclWI GGATC 8 cut(s) 378, 423, 754, 772, 824, 1129, 1772, 1785
AcoI YGGCCR 2 cut(s) 503, 1868
AcsI RAATTY 3 cut(s) 975, 1183, 1506
AcyI GRCGYC 1 cut(s) 223
AfaI GTAC 6 cut(s) 314, 859, 942, 1310, 1643, 1948
AfeI AGCGCT 1 cut(s) 1764
AfiI CCNNNNNNNGG 4 cut(s) 247, 483, 958, 1787
AflIII ACRYGT 2 cut(s) 1590, 1875
AgsI TTSAA 8 cut(s) 333, 567, 1350, 1387, 1397, 1465, 1667, 2000
AhlI ACTAGT 2 cut(s) 569, 614
AjiI CACGTC 1 cut(s) 1968
AjnI CCWGG 3 cut(s) 103, 118, 308
AjuI GAANNNNNNNTTGG 2 cut(s) 1101, 1133
AluBI AGCT 9 cut(s) 130, 544, 554, 686, 1053, 1102, 1174, 1695, 1744
AluI AGCT 9 cut(s) 130, 544, 554, 686, 1053, 1102, 1174, 1695, 1744
Alw21I GWGCWC 2 cut(s) 216, 1719
Alw26I GTCTC 4 cut(s) 17, 813, 874, 1599
AlwI GGATC 8 cut(s) 378, 423, 754, 772, 824, 1129, 1772, 1785
Aor51HI AGCGCT 1 cut(s) 1764
AoxI GGCC 5 cut(s) 503, 949, 1467, 1868, 1988
ApeKI GCWGC 5 cut(s) 397, 629, 1070, 1760, 2033
ApoI RAATTY 3 cut(s) 975, 1183, 1506
ArsI GACNNNNNNTTYG 2 cut(s) 701, 733
AseI ATTAAT 2 cut(s) 675, 788
AspA2I CCTAGG 1 cut(s) 241
AspLEI GCGC 3 cut(s) 451, 1199, 1765
AspS9I GGNCC 1 cut(s) 1988
AsuII TTCGAA 1 cut(s) 291
AvrII CCTAGG 1 cut(s) 241
BaeI ACNNNNGTAYC 2 cut(s) 849, 882
BamHI GGATCC 1 cut(s) 1777
BanI GGYRCC 2 cut(s) 53, 486
BbsI GAAGAC 2 cut(s) 351, 502
Bbv12I GWGCWC 2 cut(s) 216, 1719
BbvI GCAGC 5 cut(s) 384, 616, 1057, 1772, 2020
BccI CCATC 6 cut(s) 275, 332, 359, 458, 811, 1013
BceAI ACGGC 1 cut(s) 1148
BcgI CGANNNNNNTGC 4 cut(s) 441, 475, 1813, 1847
BciT130I CCWGG 3 cut(s) 105, 120, 310
BclI TGATCA 1 cut(s) 1962
BcoDI GTCTC 4 cut(s) 17, 813, 874, 1599
BcuI ACTAGT 2 cut(s) 569, 614
BfaI CTAG 9 cut(s) 6, 131, 242, 570, 615, 768, 1202, 1550, 1787
BfmI CTRYAG 2 cut(s) 358, 469
BfoI RGCGCY 2 cut(s) 1200, 1766
BglII AGATCT 1 cut(s) 1882
BisI GCNGC 5 cut(s) 398, 630, 1071, 1761, 2034
BlnI CCTAGG 1 cut(s) 241
BlsI GCNGC 5 cut(s) 399, 631, 1072, 1762, 2035
Bme1390I CCNGG 3 cut(s) 105, 120, 310
BmgBI CACGTC 1 cut(s) 1968
BmgT120I GGNCC 1 cut(s) 1988
BmiI GGNNCC 5 cut(s) 55, 99, 488, 1779, 1989
BmrFI CCNGG 3 cut(s) 105, 120, 310
BmsI GCATC 4 cut(s) 680, 1747, 1811, 1833
BpiI GAAGAC 2 cut(s) 351, 502
BpmI CTGGAG 3 cut(s) 87, 1223, 1420
Bpu14I TTCGAA 1 cut(s) 291
BpuEI CTTGAG 1 cut(s) 1392
BsaAI YACGTR 1 cut(s) 839
BsaHI GRCGYC 1 cut(s) 223
BsaJI CCNNGG 4 cut(s) 241, 308, 366, 655
BsaXI ACNNNNNCTCC 2 cut(s) 1418, 1448
Bsc4I CCNNNNNNNGG 4 cut(s) 247, 483, 958, 1787
Bse118I RCCGGY 2 cut(s) 149, 693
Bse1I ACTGG 2 cut(s) 885, 1470
Bse3DI GCAATG 2 cut(s) 444, 666
BseBI CCWGG 3 cut(s) 105, 120, 310
BseDI CCNNGG 4 cut(s) 241, 308, 366, 655
BseGI GGATG 4 cut(s) 695, 1299, 1813, 1824
BseLI CCNNNNNNNGG 4 cut(s) 247, 483, 958, 1787
BseMI GCAATG 2 cut(s) 444, 666
BseMII CTCAG 2 cut(s) 536, 1590
BseNI ACTGG 2 cut(s) 885, 1470
BseRI GAGGAG 1 cut(s) 90
BseX3I CGGCCG 1 cut(s) 1868
BseXI GCAGC 5 cut(s) 384, 616, 1057, 1772, 2020
BsgI GTGCAG 1 cut(s) 726
Bsh1236I CGCG 2 cut(s) 451, 1713
Bsh1285I CGRYCG 2 cut(s) 1867, 1871
BshFI GGCC 5 cut(s) 505, 951, 1469, 1870, 1990
BshNI GGYRCC 2 cut(s) 53, 486
BsiEI CGRYCG 2 cut(s) 1867, 1871
BsiHKAI GWGCWC 2 cut(s) 216, 1719
BsiSI CCGG 4 cut(s) 51, 150, 502, 694
BslFI GGGAC 2 cut(s) 1164, 1591
BslI CCNNNNNNNGG 4 cut(s) 247, 483, 958, 1787
BsmAI GTCTC 4 cut(s) 17, 813, 874, 1599
BsmBI CGTCTC 1 cut(s) 813
BsmFI GGGAC 2 cut(s) 1164, 1591
BsmI GAATGC 3 cut(s) 656, 1275, 1861
BsnI GGCC 5 cut(s) 505, 951, 1469, 1870, 1990
Bsp119I TTCGAA 1 cut(s) 291
Bsp1286I GDGCHC 2 cut(s) 216, 1719
Bsp1407I TGTACA 2 cut(s) 1641, 1946
BspANI GGCC 5 cut(s) 505, 951, 1469, 1870, 1990
BspCNI CTCAG 2 cut(s) 537, 1591
BspFNI CGCG 2 cut(s) 451, 1713
BspHI TCATGA 1 cut(s) 1009
BspLI GGNNCC 5 cut(s) 55, 99, 488, 1779, 1989
BspPI GGATC 8 cut(s) 378, 423, 754, 772, 824, 1129, 1772, 1785
BspT104I TTCGAA 1 cut(s) 291
BspT107I GGYRCC 2 cut(s) 53, 486
BsrDI GCAATG 2 cut(s) 444, 666
BsrFI RCCGGY 2 cut(s) 149, 693
BsrGI TGTACA 2 cut(s) 1641, 1946
BsrI ACTGG 2 cut(s) 885, 1470
BssAI RCCGGY 2 cut(s) 149, 693
BssECI CCNNGG 4 cut(s) 241, 308, 366, 655
BssNI GRCGYC 1 cut(s) 223
BssT1I CCWWGG 2 cut(s) 241, 655
Bst2UI CCWGG 3 cut(s) 105, 120, 310
Bst4CI ACNGT 4 cut(s) 367, 560, 713, 1646
Bst6I CTCTTC 2 cut(s) 1281, 1845
BstACI GRCGYC 1 cut(s) 223
BstAUI TGTACA 2 cut(s) 1641, 1946
BstBAI YACGTR 1 cut(s) 839
BstBI TTCGAA 1 cut(s) 291
BstC8I GCNNGC 5 cut(s) 453, 904, 1715, 1913, 1938
BstDEI CTNAG 3 cut(s) 545, 1563, 1599
BstDSI CCRYGG 1 cut(s) 366
BstENI CCTNNNNNAGG 1 cut(s) 245
BstF5I GGATG 4 cut(s) 695, 1299, 1813, 1824
BstFNI CGCG 2 cut(s) 451, 1713
BstH2I RGCGCY 2 cut(s) 1200, 1766
BstHHI GCGC 3 cut(s) 451, 1199, 1765
BstMAI GTCTC 4 cut(s) 17, 813, 874, 1599
BstMCI CGRYCG 2 cut(s) 1867, 1871
BstMWI GCNNNNNNNGC 2 cut(s) 1050, 1423
BstNI CCWGG 3 cut(s) 105, 120, 310
BstNSI RCATGY 3 cut(s) 1315, 1594, 1879
BstSCI CCNGG 3 cut(s) 103, 118, 308
BstSFI CTRYAG 2 cut(s) 358, 469
BstUI CGCG 2 cut(s) 451, 1713
BstV1I GCAGC 5 cut(s) 384, 616, 1057, 1772, 2020
BstV2I GAAGAC 2 cut(s) 351, 502
BstX2I RGATCY 6 cut(s) 415, 764, 829, 1121, 1777, 1882
BstYI RGATCY 6 cut(s) 415, 764, 829, 1121, 1777, 1882
BstZI CGGCCG 1 cut(s) 1868
BsuRI GGCC 5 cut(s) 505, 951, 1469, 1870, 1990
BtgI CCRYGG 1 cut(s) 366
BtgZI GCGATG 1 cut(s) 477
BtrI CACGTC 1 cut(s) 1968
BtsCI GGATG 4 cut(s) 695, 1299, 1813, 1824
BtsIMutI CAGTG 2 cut(s) 736, 1681
Cac8I GCNNGC 5 cut(s) 453, 904, 1715, 1913, 1938
CciI TCATGA 1 cut(s) 1009
CfoI GCGC 3 cut(s) 451, 1199, 1765
Cfr10I RCCGGY 2 cut(s) 149, 693
Cfr13I GGNCC 1 cut(s) 1988
CseI GACGC 1 cut(s) 231
Csp6I GTAC 6 cut(s) 313, 858, 941, 1309, 1642, 1947
CviAII CATG 9 cut(s) 393, 517, 1010, 1312, 1495, 1591, 1737, 1829, 1876
CviQI GTAC 6 cut(s) 313, 858, 941, 1309, 1642, 1947
DdeI CTNAG 3 cut(s) 545, 1563, 1599
DraI TTTAAA 1 cut(s) 277
EaeI YGGCCR 2 cut(s) 503, 1868
EagI CGGCCG 1 cut(s) 1868
Eam1104I CTCTTC 2 cut(s) 1281, 1845
EarI CTCTTC 2 cut(s) 1281, 1845
EclXI CGGCCG 1 cut(s) 1868
Eco130I CCWWGG 2 cut(s) 241, 655
Eco47III AGCGCT 1 cut(s) 1764
Eco52I CGGCCG 1 cut(s) 1868
EcoNI CCTNNNNNAGG 1 cut(s) 245
EcoRII CCWGG 3 cut(s) 103, 118, 308
EcoT14I CCWWGG 2 cut(s) 241, 655
EcoT22I ATGCAT 1 cut(s) 1826
ErhI CCWWGG 2 cut(s) 241, 655
Esp3I CGTCTC 1 cut(s) 813
FaeI CATG 9 cut(s) 396, 520, 1013, 1315, 1498, 1594, 1740, 1832, 1879
FalI AAGNNNNNCTT 4 cut(s) 1401, 1433, 1900, 1932
FaqI GGGAC 2 cut(s) 1164, 1591
FatI CATG 9 cut(s) 392, 516, 1009, 1311, 1494, 1590, 1736, 1828, 1875
FauNDI CATATG 1 cut(s) 1582
FbaI TGATCA 1 cut(s) 1962
Fnu4HI GCNGC 5 cut(s) 398, 630, 1071, 1761, 2034
FokI GGATG 4 cut(s) 702, 1306, 1811, 1820
Fsp4HI GCNGC 5 cut(s) 398, 630, 1071, 1761, 2034
FspBI CTAG 9 cut(s) 6, 131, 242, 570, 615, 768, 1202, 1550, 1787
GlaI GCGC 3 cut(s) 450, 1198, 1764
GluI GCNGC 5 cut(s) 398, 630, 1071, 1761, 2034
GsuI CTGGAG 3 cut(s) 87, 1223, 1420
HaeII RGCGCY 2 cut(s) 1200, 1766
HaeIII GGCC 5 cut(s) 505, 951, 1469, 1870, 1990
HapII CCGG 4 cut(s) 51, 150, 502, 694
HgaI GACGC 1 cut(s) 231
HhaI GCGC 3 cut(s) 451, 1199, 1765
Hin1I GRCGYC 1 cut(s) 223
Hin1II CATG 9 cut(s) 396, 520, 1013, 1315, 1498, 1594, 1740, 1832, 1879
Hin6I GCGC 3 cut(s) 449, 1197, 1763
HinP1I GCGC 3 cut(s) 449, 1197, 1763
HincII GTYRAC 1 cut(s) 1899
HindII GTYRAC 1 cut(s) 1899
HindIII AAGCTT 2 cut(s) 552, 1172
HpaII CCGG 4 cut(s) 51, 150, 502, 694
Hpy166II GTNNAC 3 cut(s) 139, 1642, 1899
Hpy188I TCNGA 7 cut(s) 72, 85, 1189, 1513, 1636, 1882, 2026
Hpy8I GTNNAC 3 cut(s) 139, 1642, 1899
Hpy99I CGWCG 1 cut(s) 225
HpyAV CCTTC 5 cut(s) 924, 1103, 1391, 1459, 1978
HpyCH4III ACNGT 4 cut(s) 367, 560, 713, 1646
HpyCH4IV ACGT 2 cut(s) 838, 1967
HpyCH4V TGCA 8 cut(s) 516, 624, 707, 1275, 1426, 1760, 1824, 1859
HpyF10VI GCNNNNNNNGC 2 cut(s) 1050, 1423
HpyF3I CTNAG 3 cut(s) 545, 1563, 1599
HpySE526I ACGT 2 cut(s) 838, 1967
Hsp92I GRCGYC 1 cut(s) 223
Hsp92II CATG 9 cut(s) 396, 520, 1013, 1315, 1498, 1594, 1740, 1832, 1879
HspAI GCGC 3 cut(s) 449, 1197, 1763
Ksp22I TGATCA 1 cut(s) 1962
LmnI GCTCC 3 cut(s) 103, 211, 1741
Lsp1109I GCAGC 5 cut(s) 384, 616, 1057, 1772, 2020
LweI GCATC 4 cut(s) 680, 1747, 1811, 1833
MaeI CTAG 9 cut(s) 6, 131, 242, 570, 615, 768, 1202, 1550, 1787
MaeII ACGT 2 cut(s) 838, 1967
MaeIII GTNAC 3 cut(s) 162, 1144, 1586
MboII GAAGA 5 cut(s) 356, 507, 933, 1298, 1862
MfeI CAATTG 2 cut(s) 227, 1369
MflI RGATCY 6 cut(s) 415, 764, 829, 1121, 1777, 1882
MhlI GDGCHC 2 cut(s) 216, 1719
MlyI GAGTC 6 cut(s) 41, 279, 341, 492, 1410, 1662
MmeI TCCRAC 2 cut(s) 24, 1805
MnlI CCTC 7 cut(s) 111, 241, 279, 1284, 1349, 1560, 1798
Mph1103I ATGCAT 1 cut(s) 1826
MseI TTAA 9 cut(s) 60, 276, 675, 788, 822, 1209, 1658, 1817, 2041
MslI CAYNNNNRTG 2 cut(s) 1014, 1892
MspA1I CMGCKG 2 cut(s) 544, 686
MspI CCGG 4 cut(s) 51, 150, 502, 694
MspR9I CCNGG 3 cut(s) 105, 120, 310
MunI CAATTG 2 cut(s) 227, 1369
Mva1269I GAATGC 3 cut(s) 656, 1275, 1861
MvaI CCWGG 3 cut(s) 105, 120, 310
MvnI CGCG 2 cut(s) 451, 1713
MwoI GCNNNNNNNGC 2 cut(s) 1050, 1423
NdeI CATATG 1 cut(s) 1582
NlaIII CATG 9 cut(s) 396, 520, 1013, 1315, 1498, 1594, 1740, 1832, 1879
NlaIV GGNNCC 5 cut(s) 55, 99, 488, 1779, 1989
NmuCI GTSAC 2 cut(s) 162, 1144
NsiI ATGCAT 1 cut(s) 1826
NspI RCATGY 3 cut(s) 1315, 1594, 1879
NspV TTCGAA 1 cut(s) 291
PagI TCATGA 1 cut(s) 1009
PciI ACATGT 2 cut(s) 1590, 1875
PctI GAATGC 3 cut(s) 656, 1275, 1861
PfeI GAWTC 6 cut(s) 92, 735, 1346, 1450, 1498, 2000
PfoI TCCNGGA 1 cut(s) 103
PkrI GCNGC 5 cut(s) 399, 631, 1072, 1762, 2035
Ple19I CGATCG 1 cut(s) 1867
PleI GAGTC 6 cut(s) 41, 278, 341, 492, 1409, 1661
PpsI GAGTC 6 cut(s) 41, 278, 341, 492, 1409, 1661
Ppu21I YACGTR 1 cut(s) 839
PscI ACATGT 2 cut(s) 1590, 1875
PshBI ATTAAT 2 cut(s) 675, 788
Psp6I CCWGG 3 cut(s) 103, 118, 308
PspGI CCWGG 3 cut(s) 103, 118, 308
PspN4I GGNNCC 5 cut(s) 55, 99, 488, 1779, 1989
PspPI GGNCC 1 cut(s) 1988
PsuI RGATCY 6 cut(s) 415, 764, 829, 1121, 1777, 1882
PvuI CGATCG 1 cut(s) 1867
PvuII CAGCTG 2 cut(s) 544, 686
RsaI GTAC 6 cut(s) 314, 859, 942, 1310, 1643, 1948
RsaNI GTAC 6 cut(s) 313, 858, 941, 1309, 1642, 1947
RseI CAYNNNNRTG 2 cut(s) 1014, 1892
SaqAI TTAA 9 cut(s) 60, 276, 675, 788, 822, 1209, 1658, 1817, 2041
SatI GCNGC 5 cut(s) 398, 630, 1071, 1761, 2034
Sau96I GGNCC 1 cut(s) 1988
SchI GAGTC 6 cut(s) 41, 279, 341, 492, 1410, 1662
ScrFI CCNGG 3 cut(s) 105, 120, 310
SduI GDGCHC 2 cut(s) 216, 1719
SfaNI GCATC 4 cut(s) 680, 1747, 1811, 1833
SfcI CTRYAG 2 cut(s) 358, 469
SfuI TTCGAA 1 cut(s) 291
SmiMI CAYNNNNRTG 2 cut(s) 1014, 1892
SmlI CTYRAG 1 cut(s) 1407
SmoI CTYRAG 1 cut(s) 1407
SpeI ACTAGT 2 cut(s) 569, 614
SspI AATATT 1 cut(s) 1477
SspMI CTAG 9 cut(s) 6, 131, 242, 570, 615, 768, 1202, 1550, 1787
StyD4I CCNGG 3 cut(s) 103, 118, 308
StyI CCWWGG 2 cut(s) 241, 655
TaaI ACNGT 4 cut(s) 367, 560, 713, 1646
TaiI ACGT 2 cut(s) 841, 1970
TaqI TCGA 4 cut(s) 291, 749, 1258, 1485
TaqII GACCGA 1 cut(s) 1823
TatI WGTACW 4 cut(s) 940, 1308, 1641, 1946
TfiI GAWTC 6 cut(s) 92, 735, 1346, 1450, 1498, 2000
Tru1I TTAA 9 cut(s) 60, 276, 675, 788, 822, 1209, 1658, 1817, 2041
Tru9I TTAA 9 cut(s) 60, 276, 675, 788, 822, 1209, 1658, 1817, 2041
TscAI CASTG 2 cut(s) 736, 1681
TseFI GTSAC 2 cut(s) 162, 1144
TseI GCWGC 5 cut(s) 397, 629, 1070, 1760, 2033
Tsp45I GTSAC 2 cut(s) 162, 1144
TspGWI ACGGA 1 cut(s) 419
TspRI CASTG 2 cut(s) 736, 1681
VspI ATTAAT 2 cut(s) 675, 788
XagI CCTNNNNNAGG 1 cut(s) 245
XapI RAATTY 3 cut(s) 975, 1183, 1506
XbaI TCTAGA 1 cut(s) 1201
XceI RCATGY 3 cut(s) 1315, 1594, 1879
XmaJI CCTAGG 1 cut(s) 241
XspI CTAG 9 cut(s) 6, 131, 242, 570, 615, 768, 1202, 1550, 1787
Zsp2I ATGCAT 1 cut(s) 1826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.