pycom05g20960

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
23692684 .. 23694042
1359 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g20960.5

Sequence Viewer

Length: 840 bp
ATGTTTGAGCAGCCGGGAAAATTGGCGACGGGACAAGAAGTAGCCGTGAAGAGGCTTTCAAAGTTTTCTGGACAAGGCACAGAGGAGTTTAAGAATGAATTAATACTCATCTATCAACTCCAACATACAAACCTTGTTCAGCTCTTTGGATTTTGCATTCACGAGGAGGAGAGGATGCTGATATACGAGTACATGCCAAACAAAAGCTTGGACTACTTTTTATTTGATTCCACCAGAGATCGGCAACTAGATTGGAAAAAGCGCTTCACCATAATTGAAGGAATCACTCAAGGAATGGTTTACTTGCACGAATACTCGAGGAAGAAAGTGATTCATAGAGATTTGAAAGCCGGTAATATACTACTTGACCAAAATATGAAGCCCAAAATTTCAGATTTTGGTATGGCAAAGATTTTCACAGAGGAACTGGGAGCTAATACTATGAGGATTGTCGGGACACGTGGTTATATGCCCCCTGAGTACGTCATGGGAGGAAACTTCTCTGTAAAATCTGATGTCTACAGCTATGGAGTGTTACTGCTTGAAATTATAAGCGGTAGGAAAAACAATAGCTTCTGCAATGAAGATCGTGCGCACAACTTAGTAGGACATGCATGGGAGTTATGGAAGGCAGGTAGAGGGGAAGAACTAAGGGATTCAACACTAGTGATCGAAACATCCATTAGAGGTCAATTGTTACGATGTATCCAAGTTGGTCTACTATGCGTGGAGGAAAACGCAGCCCATCGGCCATACATGTCAGAGGTGATACAAATGTTAACAAATCACAGCATGGAGTTACGTGAACCAAAAAAACCAGCATTTTATTACACAGATTGA

Protein Analysis

280

Amino Acids

32.35

Weight (kDa)

6.72

Isoelectric Point (pI)

42.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 551
Acc16I TGCGCA 1 cut(s) 594
Acc36I ACCTGC 1 cut(s) 623
AccI GTMKAC 2 cut(s) 519, 718
AciI CCGC 1 cut(s) 555
AcoI YGGCCR 1 cut(s) 749
AcsI RAATTY 1 cut(s) 387
AcvI CACGTG 1 cut(s) 461
AfaI GTAC 2 cut(s) 191, 482
AfeI AGCGCT 1 cut(s) 263
AfiI CCNNNNNNNGG 2 cut(s) 51, 240
AflIII ACRYGT 2 cut(s) 458, 756
AgsI TTSAA 5 cut(s) 60, 278, 346, 545, 660
AhlI ACTAGT 1 cut(s) 664
AluBI AGCT 5 cut(s) 142, 207, 434, 525, 573
AluI AGCT 5 cut(s) 142, 207, 434, 525, 573
Ama87I CYCGRG 1 cut(s) 316
Aor51HI AGCGCT 1 cut(s) 263
AoxI GGCC 1 cut(s) 749
ApeKI GCWGC 2 cut(s) 10, 740
ApoI RAATTY 1 cut(s) 387
AseI ATTAAT 1 cut(s) 101
AspLEI GCGC 2 cut(s) 264, 595
AsuC2I CCSGG 1 cut(s) 15
AsuHPI GGTGA 2 cut(s) 259, 778
AvaI CYCGRG 1 cut(s) 316
BaeI ACNNNNGTAYC 2 cut(s) 761, 794
BauI CACGAG 1 cut(s) 161
BbrPI CACGTG 1 cut(s) 461
BbvI GCAGC 2 cut(s) 22, 752
BccI CCATC 1 cut(s) 753
BceAI ACGGC 1 cut(s) 29
BciVI GTATCC 1 cut(s) 716
BcnI CCSGG 1 cut(s) 15
BcuI ACTAGT 1 cut(s) 664
BfaI CTAG 2 cut(s) 248, 665
BfmI CTRYAG 1 cut(s) 520
BfoI RGCGCY 1 cut(s) 265
BfuAI ACCTGC 1 cut(s) 623
BfuI GTATCC 1 cut(s) 716
BisI GCNGC 2 cut(s) 11, 741
BlsI GCNGC 2 cut(s) 12, 742
Bme1390I CCNGG 1 cut(s) 15
BmeT110I CYCGRG 1 cut(s) 316
BmrFI CCNGG 1 cut(s) 15
BmrI ACTGGG 1 cut(s) 437
BmsI GCATC 1 cut(s) 165
BmuI ACTGGG 1 cut(s) 437
BpuEI CTTGAG 1 cut(s) 273
BpuMI CCSGG 1 cut(s) 15
BsaAI YACGTR 2 cut(s) 461, 803
Bsc4I CCNNNNNNNGG 2 cut(s) 51, 240
Bse118I RCCGGY 1 cut(s) 350
Bse1I ACTGG 1 cut(s) 432
Bse3DI GCAATG 1 cut(s) 586
BseGI GGATG 2 cut(s) 180, 677
BseLI CCNNNNNNNGG 2 cut(s) 51, 240
BseMI GCAATG 1 cut(s) 586
BseMII CTCAG 1 cut(s) 468
BseNI ACTGG 1 cut(s) 432
BseRI GAGGAG 3 cut(s) 98, 179, 182
BseXI GCAGC 2 cut(s) 22, 752
BshFI GGCC 1 cut(s) 751
BsiHKCI CYCGRG 1 cut(s) 316
BsiSI CCGG 2 cut(s) 14, 351
BslFI GGGAC 2 cut(s) 45, 469
BslI CCNNNNNNNGG 2 cut(s) 51, 240
BsmFI GGGAC 2 cut(s) 45, 469
BsmI GAATGC 1 cut(s) 156
BsnI GGCC 1 cut(s) 751
BsoBI CYCGRG 1 cut(s) 316
Bsp143I GATC 3 cut(s) 238, 586, 669
BspACI CCGC 1 cut(s) 555
BspANI GGCC 1 cut(s) 751
BspCNI CTCAG 1 cut(s) 469
BspMI ACCTGC 1 cut(s) 623
BsrDI GCAATG 1 cut(s) 586
BsrFI RCCGGY 1 cut(s) 350
BsrI ACTGG 1 cut(s) 432
BssAI RCCGGY 1 cut(s) 350
BssMI GATC 3 cut(s) 238, 586, 669
BssSI CACGAG 1 cut(s) 161
Bst2BI CACGAG 1 cut(s) 161
Bst6I CTCTTC 1 cut(s) 44
BstBAI YACGTR 2 cut(s) 461, 803
BstDEI CTNAG 3 cut(s) 477, 601, 650
BstF5I GGATG 2 cut(s) 180, 677
BstH2I RGCGCY 1 cut(s) 265
BstHHI GCGC 2 cut(s) 264, 595
BstKTI GATC 3 cut(s) 241, 589, 672
BstMBI GATC 3 cut(s) 238, 586, 669
BstNSI RCATGY 3 cut(s) 196, 614, 760
BstSCI CCNGG 1 cut(s) 13
BstSFI CTRYAG 1 cut(s) 520
BstV1I GCAGC 2 cut(s) 22, 752
BsuI GTATCC 1 cut(s) 716
BsuRI GGCC 1 cut(s) 751
BtsCI GGATG 2 cut(s) 180, 677
BveI ACCTGC 1 cut(s) 623
CfoI GCGC 2 cut(s) 264, 595
Cfr10I RCCGGY 1 cut(s) 350
Csp6I GTAC 2 cut(s) 190, 481
CviAII CATG 6 cut(s) 193, 487, 611, 615, 757, 793
CviQI GTAC 2 cut(s) 190, 481
DdeI CTNAG 3 cut(s) 477, 601, 650
DpnI GATC 3 cut(s) 240, 588, 671
DpnII GATC 3 cut(s) 238, 586, 669
EaeI YGGCCR 1 cut(s) 749
Eam1104I CTCTTC 1 cut(s) 44
EarI CTCTTC 1 cut(s) 44
Eco47III AGCGCT 1 cut(s) 263
Eco72I CACGTG 1 cut(s) 461
Eco88I CYCGRG 1 cut(s) 316
EcoT22I ATGCAT 1 cut(s) 616
FaeI CATG 6 cut(s) 196, 490, 614, 618, 760, 796
FaqI GGGAC 2 cut(s) 45, 469
FatI CATG 6 cut(s) 192, 486, 610, 614, 756, 792
FblI GTMKAC 2 cut(s) 519, 718
Fnu4HI GCNGC 2 cut(s) 11, 741
FokI GGATG 2 cut(s) 187, 664
Fsp4HI GCNGC 2 cut(s) 11, 741
FspAI RTGCGCAY 1 cut(s) 594
FspBI CTAG 2 cut(s) 248, 665
FspI TGCGCA 1 cut(s) 594
GlaI GCGC 2 cut(s) 263, 594
GluI GCNGC 2 cut(s) 11, 741
HaeII RGCGCY 1 cut(s) 265
HaeIII GGCC 1 cut(s) 751
HapII CCGG 2 cut(s) 14, 351
HhaI GCGC 2 cut(s) 264, 595
Hin1II CATG 6 cut(s) 196, 490, 614, 618, 760, 796
Hin6I GCGC 2 cut(s) 262, 593
HinP1I GCGC 2 cut(s) 262, 593
HincII GTYRAC 1 cut(s) 780
HindII GTYRAC 1 cut(s) 780
HindIII AAGCTT 1 cut(s) 205
HinfI GANTC 4 cut(s) 227, 282, 331, 656
HpaI GTTAAC 1 cut(s) 780
HpaII CCGG 2 cut(s) 14, 351
HphI GGTGA 2 cut(s) 259, 778
Hpy166II GTNNAC 5 cut(s) 301, 520, 719, 780, 806
Hpy188I TCNGA 3 cut(s) 394, 514, 763
Hpy188III TCNNGA 3 cut(s) 69, 161, 454
Hpy8I GTNNAC 5 cut(s) 301, 520, 719, 780, 806
Hpy99I CGWCG 1 cut(s) 31
HpyAV CCTTC 2 cut(s) 272, 622
HpyCH4IV ACGT 3 cut(s) 460, 483, 802
HpyCH4V TGCA 4 cut(s) 156, 307, 579, 614
HpyF3I CTNAG 3 cut(s) 477, 601, 650
HpySE526I ACGT 3 cut(s) 460, 483, 802
Hsp92II CATG 6 cut(s) 196, 490, 614, 618, 760, 796
HspAI GCGC 2 cut(s) 262, 593
KspAI GTTAAC 1 cut(s) 780
Kzo9I GATC 3 cut(s) 238, 586, 669
LmnI GCTCC 1 cut(s) 431
LpnPI CCDG 8 cut(s) 27, 54, 247, 364, 413, 489, 618, 831
Lsp1109I GCAGC 2 cut(s) 22, 752
LweI GCATC 1 cut(s) 165
MaeI CTAG 2 cut(s) 248, 665
MaeII ACGT 3 cut(s) 460, 483, 802
MaeIII GTNAC 3 cut(s) 534, 696, 798
MalI GATC 3 cut(s) 240, 588, 671
MboI GATC 3 cut(s) 238, 586, 669
MboII GAAGA 4 cut(s) 61, 334, 596, 656
MfeI CAATTG 1 cut(s) 692
MluCI AATT 6 cut(s) 20, 98, 273, 387, 546, 692
MmeI TCCRAC 1 cut(s) 145
Mph1103I ATGCAT 1 cut(s) 616
MseI TTAA 3 cut(s) 90, 101, 779
MspI CCGG 2 cut(s) 14, 351
MspR9I CCNGG 1 cut(s) 15
MunI CAATTG 1 cut(s) 692
Mva1269I GAATGC 1 cut(s) 156
NciI CCSGG 1 cut(s) 15
NdeII GATC 3 cut(s) 238, 586, 669
NlaIII CATG 6 cut(s) 196, 490, 614, 618, 760, 796
NsbI TGCGCA 1 cut(s) 594
NsiI ATGCAT 1 cut(s) 616
NspI RCATGY 3 cut(s) 196, 614, 760
PaeR7I CTCGAG 1 cut(s) 316
PciI ACATGT 1 cut(s) 756
PctI GAATGC 1 cut(s) 156
PfeI GAWTC 4 cut(s) 227, 282, 331, 656
PkrI GCNGC 2 cut(s) 12, 742
PmaCI CACGTG 1 cut(s) 461
PmlI CACGTG 1 cut(s) 461
Ppu21I YACGTR 2 cut(s) 461, 803
PscI ACATGT 1 cut(s) 756
PshBI ATTAAT 1 cut(s) 101
PsiI TTATAA 1 cut(s) 551
PspCI CACGTG 1 cut(s) 461
PspXI VCTCGAGB 1 cut(s) 316
RsaI GTAC 2 cut(s) 191, 482
RsaNI GTAC 2 cut(s) 190, 481
SaqAI TTAA 3 cut(s) 90, 101, 779
SatI GCNGC 2 cut(s) 11, 741
Sau3AI GATC 3 cut(s) 238, 586, 669
ScrFI CCNGG 1 cut(s) 15
SfaNI GCATC 1 cut(s) 165
SfcI CTRYAG 1 cut(s) 520
Sfr274I CTCGAG 1 cut(s) 316
SlaI CTCGAG 1 cut(s) 316
SmlI CTYRAG 2 cut(s) 288, 316
SmoI CTYRAG 2 cut(s) 288, 316
SpeI ACTAGT 1 cut(s) 664
Sse9I AATT 6 cut(s) 20, 98, 273, 387, 546, 692
SsiI CCGC 1 cut(s) 555
SspMI CTAG 2 cut(s) 248, 665
StyD4I CCNGG 1 cut(s) 13
TaiI ACGT 3 cut(s) 463, 486, 805
TaqI TCGA 2 cut(s) 317, 672
TasI AATT 6 cut(s) 20, 98, 273, 387, 546, 692
TatI WGTACW 1 cut(s) 189
TfiI GAWTC 4 cut(s) 227, 282, 331, 656
Tru1I TTAA 3 cut(s) 90, 101, 779
Tru9I TTAA 3 cut(s) 90, 101, 779
TseI GCWGC 2 cut(s) 10, 740
TspDTI ATGAA 4 cut(s) 111, 323, 392, 597
VspI ATTAAT 1 cut(s) 101
XapI RAATTY 1 cut(s) 387
XceI RCATGY 3 cut(s) 196, 614, 760
XhoI CTCGAG 1 cut(s) 316
XmiI GTMKAC 2 cut(s) 519, 718
XspI CTAG 2 cut(s) 248, 665
Zsp2I ATGCAT 1 cut(s) 616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.