Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0000096

Physical Location & Seq

Genomic Coordinates Reverse (-)

19302101 .. 19303450

Gene Structure 1350 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG194100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGGTTAATGTGATGATCATGTTTGCTGGTTTTCAAGAACATCAGGAGAAAGAAAAGTATCTTATGATCATCAACCATGGTTTTAGGTTTGATCAACTCTTAATTTTCTTCCTGATCATTCTTTCAAGCTTGTGGAATTGTCATGTTGCTGCTGCAGCAGACAATATTGGGGACAGACTCAAAATAGGCGACACTCTCAATTCCTCAAGCGCTTTAGTTTCCACCACTGGGAAGTTCACTTTGCTTTTCTTGCCCCTCAGTTCAAGTTCCAACTACAGCTATCTATATATTAGGCGGTACAATGTAAGTGGTGCGAATAAGGCTTGGGTGGGCAACCGAGACTCGCCTGTTTTATACCCTTTTGGAGTTCTTACCTTGGACTCCAACAACACATTAAAAATCATTACAAACAACGAAGGTGGCGGTGGCGATCCTCCTATAGTGCTTGGCTCCGCGCCAAAAAGTAGTAGTAATGTTGCGGCTACTCTGTCAGATTCTGGCAATTTTATCCTACAAGAGTTGAACTCCGATGGATCAACGAAGCAGGTGTGGTGGCAAAGTTTTGATTATCCAGCAGATACCTTTTTACCAGGCATGAAGTTGGGTGTCAACCGTAGCAATGGGCACATTTGGTCTCTTACATCATGGACATCCGTTAACTACCCACCGCCGGGGCCTTTCATCCTAGATTGGGACCCAACTGCCCGCCAATTGGAAATTCGGAGAGAAGGGGTGGTTTATTGGAGAAGCGGAAACTATAGTGCTACAAACAACAGATTCCAAAACATTTTGCCGAATGCAAAGGTTAGCTACAAGTTTAGCATTGTTTCAAATGAGAATGAAGACTACCTCACTTACACTTCTGAAGATGGTGCATATGAGTTACCAGAATGGATTCTAAATTATTATGGATCGGGAATTGATATTGCACGAGCAGATCAGTGTGGAGGCTACAACACAGATGGAGTAGGGTGCCAGACAACTAGCCGGCCAACCACTTATATGGCGGATGTCGGCAGTCCATTTGGGCTAAAAAAAGGTTCCTTTAAACCAATCACCTCGAGTTCAACTTCAAGATGCCCATACTCGCTCAACTTTGTATCAAATGGAAGTCACAGTGGTACTAGTATTGACTGTAACAATACTTGTTTGCAAAACTGTGACTGCCTTGGATTCGACATTCTGTTTGATGATCAGACTGGATGCCGATTTTGGAGTGTGGACTGTGAGTTCGTTGAAGACCGCACTCAACCTGGTAATGCAAGCAATTTGGTTTTGACAAAGCTAATGCCAACAGCAAAATCACCACCGCCAAAGTCACCACCAAGCAAAAGTGGTAAGCTCCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

449

Amino Acids

49.49

Weight (kDa)

5.73

Isoelectric Point (pI)

41.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	109 - 216	8.2e-24	D-mannose binding lectin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000096)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica	MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica	Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis	pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis	RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata	RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora	Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa	Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha	Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana	Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	535
Acc36I	ACCTGC	1 cut(s)	535
AccB1I	GGYRCC	1 cut(s)	972
AccII	CGCG	1 cut(s)	455
AclWI	GGATC	3 cut(s)	425, 541, 919
AcoI	YGGCCR	1 cut(s)	989
AcsI	RAATTY	1 cut(s)	717
AcuI	CTGAAG	1 cut(s)	885
AfaI	GTAC	2 cut(s)	299, 1123
AfeI	AGCGCT	1 cut(s)	211
AfiI	CCNNNNNNNGG	5 cut(s)	228, 670, 671, 691, 712
AgsI	TTSAA	8 cut(s)	35, 126, 264, 523, 831, 1068, 1074, 1238
AhlI	ACTAGT	1 cut(s)	1124
AjnI	CCWGG	2 cut(s)	589, 1252
AjuI	GAANNNNNNNTTGG	2 cut(s)	702, 734
AloI	GAACNNNNNNTCC	2 cut(s)	1214, 1246
AluBI	AGCT	5 cut(s)	129, 279, 810, 1285, 1342
AluI	AGCT	5 cut(s)	129, 279, 810, 1285, 1342
Alw26I	GTCTC	2 cut(s)	333, 639
AlwI	GGATC	3 cut(s)	425, 541, 919
AlwNI	CAGNNNCTG	1 cut(s)	497
Ama87I	CYCGRG	1 cut(s)	1060
Aor51HI	AGCGCT	1 cut(s)	211
AoxI	GGCC	2 cut(s)	674, 989
ApeKI	GCWGC	3 cut(s)	149, 152, 155
ApoI	RAATTY	1 cut(s)	717
ArsI	GACNNNNNNTTYG	4 cut(s)	1169, 1201, 1214, 1246
Asp700I	GAANNNNTTC	1 cut(s)	894
AspLEI	GCGC	2 cut(s)	212, 457
AspS9I	GGNCC	2 cut(s)	674, 694
AsuC2I	CCSGG	1 cut(s)	672
AsuHPI	GGTGA	3 cut(s)	1048, 1296, 1311
AvaI	CYCGRG	1 cut(s)	1060
AvaII	GGWCC	1 cut(s)	694
BaeGI	GKGCMC	1 cut(s)	627
BanI	GGYRCC	1 cut(s)	972
BauI	CACGAG	1 cut(s)	930
BbsI	GAAGAC	2 cut(s)	849, 1245
BbvI	GCAGC	3 cut(s)	136, 139, 167
BccI	CCATC	3 cut(s)	524, 863, 956
BciT130I	CCWGG	2 cut(s)	591, 1254
BclI	TGATCA	5 cut(s)	15, 66, 91, 114, 1192
BcnI	CCSGG	1 cut(s)	672
BcoDI	GTCTC	2 cut(s)	333, 639
BcuI	ACTAGT	1 cut(s)	1124
BfaI	CTAG	3 cut(s)	686, 984, 1125
BfmI	CTRYAG	4 cut(s)	153, 274, 438, 757
BfoI	RGCGCY	1 cut(s)	213
BfuAI	ACCTGC	1 cut(s)	535
BisI	GCNGC	4 cut(s)	150, 153, 156, 480
BlsI	GCNGC	4 cut(s)	151, 154, 157, 481
Bme1390I	CCNGG	3 cut(s)	591, 672, 1254
Bme18I	GGWCC	1 cut(s)	694
BmeT110I	CYCGRG	1 cut(s)	1060
BmgT120I	GGNCC	2 cut(s)	674, 694
BmiI	GGNNCC	6 cut(s)	451, 675, 695, 696, 974, 1042
BmrFI	CCNGG	3 cut(s)	591, 672, 1254
BmrI	ACTGGG	1 cut(s)	237
BmsI	GCATC	2 cut(s)	1067, 1193
BmuI	ACTGGG	1 cut(s)	237
BpiI	GAAGAC	2 cut(s)	849, 1245
BplI	GAGNNNNNCTC	2 cut(s)	509, 541
BpuEI	CTTGAG	1 cut(s)	190
BpuMI	CCSGG	1 cut(s)	672
BsaI	GGTCTC	1 cut(s)	639
BsaJI	CCNNGG	4 cut(s)	76, 375, 671, 1168
Bsc4I	CCNNNNNNNGG	5 cut(s)	228, 670, 671, 691, 712
Bse118I	RCCGGY	1 cut(s)	987
Bse1I	ACTGG	2 cut(s)	232, 1204
Bse3DI	GCAATG	1 cut(s)	625
BseBI	CCWGG	2 cut(s)	591, 1254
BseDI	CCNNGG	4 cut(s)	76, 375, 671, 1168
BseGI	GGATG	4 cut(s)	650, 681, 1015, 1208
BseLI	CCNNNNNNNGG	5 cut(s)	228, 670, 671, 691, 712
BseMI	GCAATG	1 cut(s)	625
BseMII	CTCAG	1 cut(s)	271
BseNI	ACTGG	2 cut(s)	232, 1204
BseSI	GKGCMC	1 cut(s)	627
BseXI	GCAGC	3 cut(s)	136, 139, 167
Bsh1236I	CGCG	1 cut(s)	455
BshFI	GGCC	2 cut(s)	676, 991
BshNI	GGYRCC	1 cut(s)	972
BsiHKCI	CYCGRG	1 cut(s)	1060
BsiSI	CCGG	2 cut(s)	671, 988
BslFI	GGGAC	2 cut(s)	185, 707
BslI	CCNNNNNNNGG	5 cut(s)	228, 670, 671, 691, 712
BsmAI	GTCTC	2 cut(s)	333, 639
BsmFI	GGGAC	2 cut(s)	185, 707
BsmI	GAATGC	1 cut(s)	802
BsnI	GGCC	2 cut(s)	676, 991
Bso31I	GGTCTC	1 cut(s)	639
BsoBI	CYCGRG	1 cut(s)	1060
Bsp1286I	GDGCHC	1 cut(s)	627
Bsp143I	GATC	9 cut(s)	15, 66, 91, 114, 430, 533, 911, 937, 1192
Bsp19I	CCATGG	1 cut(s)	76
BspANI	GGCC	2 cut(s)	676, 991
BspCNI	CTCAG	1 cut(s)	270
BspFNI	CGCG	1 cut(s)	455
BspLI	GGNNCC	6 cut(s)	451, 675, 695, 696, 974, 1042
BspMAI	CTGCAG	1 cut(s)	157
BspMI	ACCTGC	1 cut(s)	535
BspPI	GGATC	3 cut(s)	425, 541, 919
BspT107I	GGYRCC	1 cut(s)	972
BspTNI	GGTCTC	1 cut(s)	639
BsrDI	GCAATG	1 cut(s)	625
BsrFI	RCCGGY	1 cut(s)	987
BsrI	ACTGG	2 cut(s)	232, 1204
BssAI	RCCGGY	1 cut(s)	987
BssECI	CCNNGG	4 cut(s)	76, 375, 671, 1168
BssMI	GATC	9 cut(s)	15, 66, 91, 114, 430, 533, 911, 937, 1192
BssSI	CACGAG	1 cut(s)	930
BssT1I	CCWWGG	3 cut(s)	76, 375, 1168
Bst2BI	CACGAG	1 cut(s)	930
Bst2UI	CCWGG	2 cut(s)	591, 1254
Bst4CI	ACNGT	5 cut(s)	614, 1118, 1136, 1160, 1226
BstC8I	GCNNGC	3 cut(s)	706, 989, 1264
BstDEI	CTNAG	1 cut(s)	257
BstDSI	CCRYGG	1 cut(s)	76
BstF5I	GGATG	4 cut(s)	650, 681, 1015, 1208
BstFNI	CGCG	1 cut(s)	455
BstH2I	RGCGCY	1 cut(s)	213
BstHHI	GCGC	2 cut(s)	212, 457
BstKTI	GATC	9 cut(s)	18, 69, 94, 117, 433, 536, 914, 940, 1195
BstMAI	GTCTC	2 cut(s)	333, 639
BstMBI	GATC	9 cut(s)	15, 66, 91, 114, 430, 533, 911, 937, 1192
BstMWI	GCNNNNNNNGC	3 cut(s)	155, 250, 320
BstNI	CCWGG	2 cut(s)	591, 1254
BstSCI	CCNGG	3 cut(s)	589, 670, 1252
BstSFI	CTRYAG	4 cut(s)	153, 274, 438, 757
BstSLI	GKGCMC	1 cut(s)	627
BstUI	CGCG	1 cut(s)	455
BstV1I	GCAGC	3 cut(s)	136, 139, 167
BstV2I	GAAGAC	2 cut(s)	849, 1245
BstXI	CCANNNNNNTGG	1 cut(s)	1003
BsuRI	GGCC	2 cut(s)	676, 991
BtgI	CCRYGG	1 cut(s)	76
BtsCI	GGATG	4 cut(s)	650, 681, 1015, 1208
BtsIMutI	CAGTG	3 cut(s)	225, 947, 1123
BveI	ACCTGC	1 cut(s)	535
Cac8I	GCNNGC	3 cut(s)	706, 989, 1264
CaiI	CAGNNNCTG	1 cut(s)	497
CfoI	GCGC	2 cut(s)	212, 457
Cfr10I	RCCGGY	1 cut(s)	987
Cfr13I	GGNCC	2 cut(s)	674, 694
CsiI	ACCWGGT	1 cut(s)	1252
Csp6I	GTAC	2 cut(s)	298, 1122
CspCI	CAANNNNNGTGG	4 cut(s)	289, 324, 400, 435
CviAII	CATG	5 cut(s)	19, 77, 143, 595, 645
CviQI	GTAC	2 cut(s)	298, 1122
DdeI	CTNAG	1 cut(s)	257
DpnI	GATC	9 cut(s)	17, 68, 93, 116, 432, 535, 913, 939, 1194
DpnII	GATC	9 cut(s)	15, 66, 91, 114, 430, 533, 911, 937, 1192
DraI	TTTAAA	1 cut(s)	1048
EaeI	YGGCCR	1 cut(s)	989
EciI	GGCGGA	1 cut(s)	1022
Eco130I	CCWWGG	3 cut(s)	76, 375, 1168
Eco31I	GGTCTC	1 cut(s)	639
Eco47I	GGWCC	1 cut(s)	694
Eco47III	AGCGCT	1 cut(s)	211
Eco57I	CTGAAG	1 cut(s)	885
Eco88I	CYCGRG	1 cut(s)	1060
EcoO109I	RGGNCCY	2 cut(s)	674, 694
EcoRII	CCWGG	2 cut(s)	589, 1252
EcoT14I	CCWWGG	3 cut(s)	76, 375, 1168
ErhI	CCWWGG	3 cut(s)	76, 375, 1168
FaeI	CATG	5 cut(s)	22, 80, 146, 598, 648
FaqI	GGGAC	2 cut(s)	185, 707
FatI	CATG	5 cut(s)	18, 76, 142, 594, 644
FauI	CCCGC	1 cut(s)	713
FauNDI	CATATG	1 cut(s)	877
FbaI	TGATCA	5 cut(s)	15, 66, 91, 114, 1192
Fnu4HI	GCNGC	4 cut(s)	150, 153, 156, 480
FokI	GGATG	4 cut(s)	637, 668, 1022, 1215
Fsp4HI	GCNGC	4 cut(s)	150, 153, 156, 480
FspBI	CTAG	3 cut(s)	686, 984, 1125
GlaI	GCGC	2 cut(s)	211, 456
GluI	GCNGC	4 cut(s)	150, 153, 156, 480
HaeII	RGCGCY	1 cut(s)	213
HaeIII	GGCC	2 cut(s)	676, 991
HapII	CCGG	2 cut(s)	671, 988
HhaI	GCGC	2 cut(s)	212, 457
Hin1II	CATG	5 cut(s)	22, 80, 146, 598, 648
Hin6I	GCGC	2 cut(s)	210, 455
HinP1I	GCGC	2 cut(s)	210, 455
HincII	GTYRAC	2 cut(s)	610, 658
HindII	GTYRAC	2 cut(s)	610, 658
HindIII	AAGCTT	1 cut(s)	127
HinfI	GANTC	7 cut(s)	177, 341, 380, 494, 777, 895, 1173
HpaI	GTTAAC	1 cut(s)	658
HpaII	CCGG	2 cut(s)	671, 988
HphI	GGTGA	3 cut(s)	1048, 1296, 1311
Hpy166II	GTNNAC	4 cut(s)	237, 610, 658, 1222
Hpy188I	TCNGA	5 cut(s)	493, 529, 723, 865, 1197
Hpy188III	TCNNGA	5 cut(s)	35, 44, 112, 915, 1074
Hpy8I	GTNNAC	4 cut(s)	237, 610, 658, 1222
HpyAV	CCTTC	2 cut(s)	410, 722
HpyCH4III	ACNGT	5 cut(s)	614, 1118, 1136, 1160, 1226
HpyCH4V	TGCA	6 cut(s)	155, 800, 875, 929, 1153, 1262
HpyF10VI	GCNNNNNNNGC	3 cut(s)	155, 250, 320
HpyF3I	CTNAG	1 cut(s)	257
Hsp92II	CATG	5 cut(s)	22, 80, 146, 598, 648
HspAI	GCGC	2 cut(s)	210, 455
KflI	GGGWCCC	1 cut(s)	694
KroI	GCCGGC	1 cut(s)	987
KroNI	GCCGGC	1 cut(s)	989
Ksp22I	TGATCA	5 cut(s)	15, 66, 91, 114, 1192
KspAI	GTTAAC	1 cut(s)	658
Kzo9I	GATC	9 cut(s)	15, 66, 91, 114, 430, 533, 911, 937, 1192
LmnI	GCTCC	2 cut(s)	455, 1347
Lsp1109I	GCAGC	3 cut(s)	136, 139, 167
LweI	GCATC	2 cut(s)	1067, 1193
MabI	ACCWGGT	1 cut(s)	1252
MaeI	CTAG	3 cut(s)	686, 984, 1125
MaeIII	GTNAC	5 cut(s)	882, 1112, 1136, 1160, 1317
MalI	GATC	9 cut(s)	17, 68, 93, 116, 432, 535, 913, 939, 1194
MboI	GATC	9 cut(s)	15, 66, 91, 114, 430, 533, 911, 937, 1192
MboII	GAAGA	4 cut(s)	100, 854, 878, 1250
MfeI	CAATTG	1 cut(s)	710
MhlI	GDGCHC	1 cut(s)	627
MluCI	AATT	9 cut(s)	102, 136, 199, 502, 710, 717, 901, 918, 1267
MlyI	GAGTC	3 cut(s)	171, 335, 374
MmeI	TCCRAC	2 cut(s)	294, 408
MnlI	CCTC	6 cut(s)	214, 266, 444, 860, 941, 1069
MroNI	GCCGGC	1 cut(s)	987
MroXI	GAANNNNTTC	1 cut(s)	894
MseI	TTAA	5 cut(s)	6, 101, 395, 657, 1047
MslI	CAYNNNNRTG	1 cut(s)	1001
MspI	CCGG	2 cut(s)	671, 988
MspR9I	CCNGG	3 cut(s)	591, 672, 1254
MunI	CAATTG	1 cut(s)	710
Mva1269I	GAATGC	1 cut(s)	802
MvaI	CCWGG	2 cut(s)	591, 1254
MvnI	CGCG	1 cut(s)	455
MwoI	GCNNNNNNNGC	3 cut(s)	155, 250, 320
NaeI	GCCGGC	1 cut(s)	989
NciI	CCSGG	1 cut(s)	672
NcoI	CCATGG	1 cut(s)	76
NdeI	CATATG	1 cut(s)	877
NdeII	GATC	9 cut(s)	15, 66, 91, 114, 430, 533, 911, 937, 1192
NgoMIV	GCCGGC	1 cut(s)	987
NlaIII	CATG	5 cut(s)	22, 80, 146, 598, 648
NlaIV	GGNNCC	6 cut(s)	451, 675, 695, 696, 974, 1042
NmuCI	GTSAC	3 cut(s)	1112, 1160, 1317
PaeR7I	CTCGAG	1 cut(s)	1060
PaqCI	CACCTGC	1 cut(s)	535
PctI	GAATGC	1 cut(s)	802
PdiI	GCCGGC	1 cut(s)	989
PdmI	GAANNNNTTC	1 cut(s)	894
PfeI	GAWTC	4 cut(s)	494, 777, 895, 1173
PkrI	GCNGC	4 cut(s)	151, 154, 157, 481
PleI	GAGTC	3 cut(s)	171, 335, 374
PpsI	GAGTC	3 cut(s)	171, 335, 374
PpuMI	RGGWCCY	1 cut(s)	694
Psp5II	RGGWCCY	1 cut(s)	694
Psp6I	CCWGG	2 cut(s)	589, 1252
PspGI	CCWGG	2 cut(s)	589, 1252
PspN4I	GGNNCC	6 cut(s)	451, 675, 695, 696, 974, 1042
PspPI	GGNCC	2 cut(s)	674, 694
PspPPI	RGGWCCY	1 cut(s)	694
PspXI	VCTCGAGB	1 cut(s)	1060
PstI	CTGCAG	1 cut(s)	157
PstNI	CAGNNNCTG	1 cut(s)	497
RsaI	GTAC	2 cut(s)	299, 1123
RsaNI	GTAC	2 cut(s)	298, 1122
RseI	CAYNNNNRTG	1 cut(s)	1001
SaqAI	TTAA	5 cut(s)	6, 101, 395, 657, 1047
SatI	GCNGC	4 cut(s)	150, 153, 156, 480
Sau3AI	GATC	9 cut(s)	15, 66, 91, 114, 430, 533, 911, 937, 1192
Sau96I	GGNCC	2 cut(s)	674, 694
SchI	GAGTC	3 cut(s)	171, 335, 374
ScrFI	CCNGG	3 cut(s)	591, 672, 1254
SduI	GDGCHC	1 cut(s)	627
SexAI	ACCWGGT	1 cut(s)	1252
SfaNI	GCATC	2 cut(s)	1067, 1193
SfcI	CTRYAG	4 cut(s)	153, 274, 438, 757
Sfr274I	CTCGAG	1 cut(s)	1060
SinI	GGWCC	1 cut(s)	694
SlaI	CTCGAG	1 cut(s)	1060
SmiMI	CAYNNNNRTG	1 cut(s)	1001
SmlI	CTYRAG	2 cut(s)	205, 1060
SmoI	CTYRAG	2 cut(s)	205, 1060
SpeI	ACTAGT	1 cut(s)	1124
Sse9I	AATT	9 cut(s)	102, 136, 199, 502, 710, 717, 901, 918, 1267
SspI	AATATT	1 cut(s)	166
SspMI	CTAG	3 cut(s)	686, 984, 1125
StyD4I	CCNGG	3 cut(s)	589, 670, 1252
StyI	CCWWGG	3 cut(s)	76, 375, 1168
TaaI	ACNGT	5 cut(s)	614, 1118, 1136, 1160, 1226
TaqI	TCGA	2 cut(s)	1061, 1176
TasI	AATT	9 cut(s)	102, 136, 199, 502, 710, 717, 901, 918, 1267
TauI	GCSGC	1 cut(s)	482
TfiI	GAWTC	4 cut(s)	494, 777, 895, 1173
Tru1I	TTAA	5 cut(s)	6, 101, 395, 657, 1047
Tru9I	TTAA	5 cut(s)	6, 101, 395, 657, 1047
TscAI	CASTG	3 cut(s)	232, 947, 1123
TseFI	GTSAC	3 cut(s)	1112, 1160, 1317
TseI	GCWGC	3 cut(s)	149, 152, 155
Tsp45I	GTSAC	3 cut(s)	1112, 1160, 1317
TspDTI	ATGAA	3 cut(s)	611, 670, 855
TspGWI	ACGGA	1 cut(s)	643
TspRI	CASTG	3 cut(s)	232, 947, 1123
VpaK11BI	GGWCC	1 cut(s)	694
XapI	RAATTY	1 cut(s)	717
XhoI	CTCGAG	1 cut(s)	1060
XmnI	GAANNNNTTC	1 cut(s)	894
XspI	CTAG	3 cut(s)	686, 984, 1125

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.