RLG00000032847

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
19874315 .. 19875031
717 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032847

Sequence Viewer

Length: 531 bp
ATGGCAAGGATTTTCACAGATAATGAACTTGAAGGAAATACAGGCAGGATTGTTGGGACACTTGGTTACATGCCTCCTGAGTACGCAATGAATGGAGTTTTTTCCGTAAAATCCGATGTCTACAGTTTTGGGGTGTTAATGCTTGAAATCCGAAGTGGTAGGAAAAACAACAACTTCTACAATGATGGTCGAGTACTCAATTCAGTAGGATATGCTTGGGAGTTATGGAAAGAAGGTGCAGGGCTACAACTAATGGATTCAAACTTGGGAGATTCATGTAATATGGATCAGTTTTTAAGATGCGTCATTGTTGGTCTACTATGCGTGGGGGATAATGCAGCCAATTGGCCTACCATGTCAGAGGTGATATCTATGTTGACAAATGAAAGCGTGCCACTACCAGAACCTACAAAACCATCATTTTGTACGGAAGAAGTAATCAGTGCTAGTGCTACTAGTACTATAGTTGGAGACAAACAACAAATTGTGTCAATGAATGGTATGACCATTTCCAATATGTATGGACGTTAA

Protein Analysis

177

Amino Acids

19.31

Weight (kDa)

4.54

Isoelectric Point (pI)

37.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 15 - 57 5.1e-08 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 120, 316
AclWI GGATC 1 cut(s) 294
AfaI GTAC 4 cut(s) 83, 195, 427, 460
AgsI TTSAA 3 cut(s) 32, 146, 261
AhlI ACTAGT 1 cut(s) 455
Alw26I GTCTC 1 cut(s) 465
AlwI GGATC 1 cut(s) 294
AoxI GGCC 1 cut(s) 347
ApeKI GCWGC 1 cut(s) 338
AsuHPI GGTGA 1 cut(s) 376
BbvI GCAGC 1 cut(s) 350
BccI CCATC 2 cut(s) 179, 424
BcoDI GTCTC 1 cut(s) 465
BcuI ACTAGT 1 cut(s) 455
BfaI CTAG 2 cut(s) 447, 456
BfmI CTRYAG 2 cut(s) 121, 462
BisI GCNGC 1 cut(s) 339
BlsI GCNGC 1 cut(s) 340
BmcAI AGTACT 2 cut(s) 195, 460
BmsI GCATC 1 cut(s) 290
Bse3DI GCAATG 1 cut(s) 93
BseMI GCAATG 1 cut(s) 93
BseMII CTCAG 1 cut(s) 69
BseXI GCAGC 1 cut(s) 350
BsgI GTGCAG 1 cut(s) 258
BshFI GGCC 1 cut(s) 349
BslFI GGGAC 1 cut(s) 70
BsmAI GTCTC 1 cut(s) 465
BsmFI GGGAC 1 cut(s) 70
BsnI GGCC 1 cut(s) 349
Bsp143I GATC 1 cut(s) 286
BspANI GGCC 1 cut(s) 349
BspCNI CTCAG 1 cut(s) 70
BspPI GGATC 1 cut(s) 294
BsrDI GCAATG 1 cut(s) 93
BssMI GATC 1 cut(s) 286
Bst4CI ACNGT 1 cut(s) 125
BstC8I GCNNGC 1 cut(s) 392
BstDEI CTNAG 1 cut(s) 78
BstKTI GATC 1 cut(s) 289
BstMAI GTCTC 1 cut(s) 465
BstMBI GATC 1 cut(s) 286
BstNSI RCATGY 1 cut(s) 73
BstSFI CTRYAG 2 cut(s) 121, 462
BstV1I GCAGC 1 cut(s) 350
BsuRI GGCC 1 cut(s) 349
BtsIMutI CAGTG 1 cut(s) 448
Cac8I GCNNGC 1 cut(s) 392
CseI GACGC 1 cut(s) 292
Csp6I GTAC 4 cut(s) 82, 194, 426, 459
CviAII CATG 3 cut(s) 70, 276, 355
CviJI RGCY 3 cut(s) 244, 341, 349
CviKI_1 RGCY 3 cut(s) 244, 341, 349
CviQI GTAC 4 cut(s) 82, 194, 426, 459
DdeI CTNAG 1 cut(s) 78
DpnI GATC 1 cut(s) 288
DpnII GATC 1 cut(s) 286
Eco32I GATATC 1 cut(s) 369
EcoRV GATATC 1 cut(s) 369
FaeI CATG 3 cut(s) 73, 279, 358
FaqI GGGAC 1 cut(s) 70
FatI CATG 3 cut(s) 69, 275, 354
FblI GTMKAC 2 cut(s) 120, 316
Fnu4HI GCNGC 1 cut(s) 339
Fsp4HI GCNGC 1 cut(s) 339
FspBI CTAG 2 cut(s) 447, 456
GluI GCNGC 1 cut(s) 339
HaeIII GGCC 1 cut(s) 349
HgaI GACGC 1 cut(s) 292
Hin1II CATG 3 cut(s) 73, 279, 358
HincII GTYRAC 1 cut(s) 378
HindII GTYRAC 1 cut(s) 378
HinfI GANTC 2 cut(s) 257, 272
HphI GGTGA 1 cut(s) 376
Hpy166II GTNNAC 3 cut(s) 121, 317, 378
Hpy188I TCNGA 3 cut(s) 115, 152, 361
Hpy188III TCNNGA 1 cut(s) 77
Hpy8I GTNNAC 3 cut(s) 121, 317, 378
HpyAV CCTTC 2 cut(s) 26, 227
HpyCH4III ACNGT 1 cut(s) 125
HpyCH4IV ACGT 1 cut(s) 526
HpyCH4V TGCA 2 cut(s) 239, 338
HpyF3I CTNAG 1 cut(s) 78
HpySE526I ACGT 1 cut(s) 526
Hsp92II CATG 3 cut(s) 73, 279, 358
Kzo9I GATC 1 cut(s) 286
LpnPI CCDG 5 cut(s) 27, 31, 90, 225, 414
Lsp1109I GCAGC 1 cut(s) 350
LweI GCATC 1 cut(s) 290
MaeI CTAG 2 cut(s) 447, 456
MaeII ACGT 1 cut(s) 526
MaeIII GTNAC 1 cut(s) 65
MalI GATC 1 cut(s) 288
MboI GATC 1 cut(s) 286
MboII GAAGA 1 cut(s) 443
MfeI CAATTG 1 cut(s) 343
MluCI AATT 3 cut(s) 199, 343, 483
MmeI TCCRAC 1 cut(s) 448
MnlI CCTC 2 cut(s) 84, 355
MseI TTAA 3 cut(s) 137, 296, 529
MunI CAATTG 1 cut(s) 343
NdeII GATC 1 cut(s) 286
NlaIII CATG 3 cut(s) 73, 279, 358
NspI RCATGY 1 cut(s) 73
PfeI GAWTC 2 cut(s) 257, 272
PkrI GCNGC 1 cut(s) 340
RsaI GTAC 4 cut(s) 83, 195, 427, 460
RsaNI GTAC 4 cut(s) 82, 194, 426, 459
SaqAI TTAA 3 cut(s) 137, 296, 529
SatI GCNGC 1 cut(s) 339
Sau3AI GATC 1 cut(s) 286
ScaI AGTACT 2 cut(s) 195, 460
SetI ASST 4 cut(s) 238, 366, 409, 529
SfaNI GCATC 1 cut(s) 290
SfcI CTRYAG 2 cut(s) 121, 462
SpeI ACTAGT 1 cut(s) 455
Sse9I AATT 3 cut(s) 199, 343, 483
SspMI CTAG 2 cut(s) 447, 456
TaaI ACNGT 1 cut(s) 125
TaiI ACGT 1 cut(s) 529
TaqI TCGA 1 cut(s) 190
TasI AATT 3 cut(s) 199, 343, 483
TatI WGTACW 2 cut(s) 193, 458
TfiI GAWTC 2 cut(s) 257, 272
Tru1I TTAA 3 cut(s) 137, 296, 529
Tru9I TTAA 3 cut(s) 137, 296, 529
TscAI CASTG 1 cut(s) 448
TseI GCWGC 1 cut(s) 338
TspDTI ATGAA 5 cut(s) 39, 104, 264, 399, 509
TspGWI ACGGA 2 cut(s) 94, 443
TspRI CASTG 1 cut(s) 448
XceI RCATGY 1 cut(s) 73
XmiI GTMKAC 2 cut(s) 120, 316
XspI CTAG 2 cut(s) 447, 456
ZrmI AGTACT 2 cut(s) 195, 460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.