Rroxscaffold_1G00053660

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
74785511 .. 74787243
1733 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00053660.1

Sequence Viewer

Length: 675 bp
ATGGAGTGGGGAATTGATATTGCACGAGCAGATCAGTGTGGAGGCTACAGCACAGATGGACTAGGGTGCCAAACAAGTGGCCGGCCAACTACTTGTATGGCAGATTTCGGCAGTTCATTTGTGCCAAAAAATGGTTATTTTCAACCAATTACCTCGAGTTCAACTTCAAGATGCCCATACTCGCTCAACTTTGTATCAAATGGAAGTCACAGTGGTACTAGTATTGACTGTAACAATACTTGTTTGCAAAACTGTGACTGCCTTGGATTCGACTTTCTATTTGAAAATCAGACTGGATGCCGATTTTGGAGTGTGGACTGTGAGTTCGTTGAAAACCGCACTCAACCTGGTAATGCAAGCAGTTTGGTTTTAACAAAGCTAATGCCAACAGCAAAATCACCACCGCCAAAGTCACCGCCAAGCAAAAGAGGTGAGGGTGAGATCGACCAGAATCAATTGCTCAACTTCAGGAAGGCTAAGAGACCTACTGATTTGAATGAAAATGATGGAAAGATGGGACATGATTTGAGCGTATTTAGTTATGCATCTGTAATGGCTGCCACAATCAACTTCGCTGAAGAAAACAAGCTTGGAGAAGGGGGCTTTGGACCTGTTTATAAGAAGCTTAAGACTTGTAGTGGTCTTTTTTATCTATTAAACTCATTAGAAATATGA

Protein Analysis

224

Amino Acids

24.39

Weight (kDa)

5.45

Isoelectric Point (pI)

34.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 618
AccB1I GGYRCC 1 cut(s) 66
AccB7I CCANNNNNTGG 1 cut(s) 131
AciI CCGC 3 cut(s) 337, 404, 416
AcoI YGGCCR 2 cut(s) 79, 83
AcuI CTGAAG 2 cut(s) 451, 597
AfaI GTAC 1 cut(s) 217
AfiI CCNNNNNNNGG 1 cut(s) 131
AflII CTTAAG 1 cut(s) 626
AgsI TTSAA 6 cut(s) 143, 162, 168, 284, 332, 496
AhlI ACTAGT 1 cut(s) 218
AjnI CCWGG 1 cut(s) 346
AjuI GAANNNNNNNTTGG 4 cut(s) 573, 588, 605, 620
AloI GAACNNNNNNTCC 2 cut(s) 308, 340
AluBI AGCT 3 cut(s) 379, 589, 625
AluI AGCT 3 cut(s) 379, 589, 625
Alw26I GTCTC 1 cut(s) 475
Ama87I CYCGRG 1 cut(s) 154
AoxI GGCC 2 cut(s) 79, 83
ApeKI GCWGC 1 cut(s) 557
ArsI GACNNNNNNTTYG 4 cut(s) 263, 295, 308, 340
AspS9I GGNCC 1 cut(s) 608
AsuHPI GGTGA 4 cut(s) 390, 405, 443, 449
AvaI CYCGRG 1 cut(s) 154
AvaII GGWCC 1 cut(s) 608
BanI GGYRCC 1 cut(s) 66
BauI CACGAG 1 cut(s) 24
BbvI GCAGC 1 cut(s) 544
BccI CCATC 3 cut(s) 50, 500, 508
BciT130I CCWGG 1 cut(s) 348
BcoDI GTCTC 1 cut(s) 475
BcuI ACTAGT 1 cut(s) 218
BfaI CTAG 2 cut(s) 62, 219
BfmI CTRYAG 1 cut(s) 46
BfrI CTTAAG 1 cut(s) 626
BisI GCNGC 1 cut(s) 558
BlsI GCNGC 1 cut(s) 559
Bme1390I CCNGG 1 cut(s) 348
Bme18I GGWCC 1 cut(s) 608
BmeT110I CYCGRG 1 cut(s) 154
BmgT120I GGNCC 1 cut(s) 608
BmiI GGNNCC 1 cut(s) 68
BmrFI CCNGG 1 cut(s) 348
BmsI GCATC 3 cut(s) 161, 287, 554
BsaI GGTCTC 1 cut(s) 475
BsaJI CCNNGG 1 cut(s) 262
Bsc4I CCNNNNNNNGG 1 cut(s) 131
Bse118I RCCGGY 1 cut(s) 81
Bse1I ACTGG 1 cut(s) 298
BseBI CCWGG 1 cut(s) 348
BseDI CCNNGG 1 cut(s) 262
BseGI GGATG 1 cut(s) 302
BseLI CCNNNNNNNGG 1 cut(s) 131
BseNI ACTGG 1 cut(s) 298
BseXI GCAGC 1 cut(s) 544
BshFI GGCC 2 cut(s) 81, 85
BshNI GGYRCC 1 cut(s) 66
BsiHKCI CYCGRG 1 cut(s) 154
BsiSI CCGG 1 cut(s) 82
BslFI GGGAC 1 cut(s) 531
BslI CCNNNNNNNGG 1 cut(s) 131
BsmAI GTCTC 1 cut(s) 475
BsmFI GGGAC 1 cut(s) 531
BsnI GGCC 2 cut(s) 81, 85
Bso31I GGTCTC 1 cut(s) 475
BsoBI CYCGRG 1 cut(s) 154
Bsp143I GATC 2 cut(s) 31, 441
BspACI CCGC 3 cut(s) 337, 404, 416
BspANI GGCC 2 cut(s) 81, 85
BspLI GGNNCC 1 cut(s) 68
BspT107I GGYRCC 1 cut(s) 66
BspTI CTTAAG 1 cut(s) 626
BspTNI GGTCTC 1 cut(s) 475
BsrFI RCCGGY 1 cut(s) 81
BsrI ACTGG 1 cut(s) 298
BssAI RCCGGY 1 cut(s) 81
BssECI CCNNGG 1 cut(s) 262
BssMI GATC 2 cut(s) 31, 441
BssSI CACGAG 1 cut(s) 24
BssT1I CCWWGG 1 cut(s) 262
Bst2BI CACGAG 1 cut(s) 24
Bst2UI CCWGG 1 cut(s) 348
Bst4CI ACNGT 4 cut(s) 212, 230, 254, 320
BstAFI CTTAAG 1 cut(s) 626
BstC8I GCNNGC 2 cut(s) 83, 358
BstDEI CTNAG 1 cut(s) 477
BstF5I GGATG 1 cut(s) 302
BstKTI GATC 2 cut(s) 34, 444
BstMAI GTCTC 1 cut(s) 475
BstMBI GATC 2 cut(s) 31, 441
BstNI CCWGG 1 cut(s) 348
BstSCI CCNGG 1 cut(s) 346
BstSFI CTRYAG 1 cut(s) 46
BstV1I GCAGC 1 cut(s) 544
BstXI CCANNNNNNTGG 1 cut(s) 77
BsuRI GGCC 2 cut(s) 81, 85
BtsCI GGATG 1 cut(s) 302
BtsIMutI CAGTG 2 cut(s) 41, 217
Cac8I GCNNGC 2 cut(s) 83, 358
Cfr10I RCCGGY 1 cut(s) 81
Cfr13I GGNCC 1 cut(s) 608
CsiI ACCWGGT 1 cut(s) 346
Csp6I GTAC 1 cut(s) 216
CviAII CATG 1 cut(s) 521
CviJI RGCY 9 cut(s) 45, 81, 85, 379, 476, 557, 589, 603, 625
CviKI_1 RGCY 9 cut(s) 45, 81, 85, 379, 476, 557, 589, 603, 625
CviQI GTAC 1 cut(s) 216
DdeI CTNAG 1 cut(s) 477
DpnI GATC 2 cut(s) 33, 443
DpnII GATC 2 cut(s) 31, 441
EaeI YGGCCR 2 cut(s) 79, 83
Eco130I CCWWGG 1 cut(s) 262
Eco31I GGTCTC 1 cut(s) 475
Eco47I GGWCC 1 cut(s) 608
Eco57I CTGAAG 2 cut(s) 451, 597
Eco88I CYCGRG 1 cut(s) 154
EcoRII CCWGG 1 cut(s) 346
EcoT14I CCWWGG 1 cut(s) 262
EcoT22I ATGCAT 1 cut(s) 547
ErhI CCWWGG 1 cut(s) 262
FaeI CATG 1 cut(s) 524
FaiI YATR 6 cut(s) 98, 178, 522, 543, 618, 673
FaqI GGGAC 1 cut(s) 531
FatI CATG 1 cut(s) 520
Fnu4HI GCNGC 1 cut(s) 558
FokI GGATG 1 cut(s) 309
FseI GGCCGGCC 1 cut(s) 85
Fsp4HI GCNGC 1 cut(s) 558
FspBI CTAG 2 cut(s) 62, 219
GluI GCNGC 1 cut(s) 558
HaeIII GGCC 2 cut(s) 81, 85
HapII CCGG 1 cut(s) 82
Hin1II CATG 1 cut(s) 524
HindIII AAGCTT 2 cut(s) 587, 623
HinfI GANTC 2 cut(s) 267, 451
HpaII CCGG 1 cut(s) 82
HphI GGTGA 4 cut(s) 390, 405, 443, 449
Hpy166II GTNNAC 1 cut(s) 316
Hpy188I TCNGA 1 cut(s) 291
Hpy188III TCNNGA 2 cut(s) 168, 469
Hpy8I GTNNAC 1 cut(s) 316
HpyAV CCTTC 2 cut(s) 466, 590
HpyCH4III ACNGT 4 cut(s) 212, 230, 254, 320
HpyCH4V TGCA 4 cut(s) 23, 247, 356, 545
HpyF3I CTNAG 1 cut(s) 477
Hsp92II CATG 1 cut(s) 524
KroI GCCGGC 1 cut(s) 81
KroNI GCCGGC 1 cut(s) 83
Kzo9I GATC 2 cut(s) 31, 441
LpnPI CCDG 7 cut(s) 95, 279, 333, 360, 454, 461, 624
Lsp1109I GCAGC 1 cut(s) 544
LweI GCATC 3 cut(s) 161, 287, 554
MabI ACCWGGT 1 cut(s) 346
MaeI CTAG 2 cut(s) 62, 219
MaeIII GTNAC 4 cut(s) 206, 230, 254, 411
MalI GATC 2 cut(s) 33, 443
MboI GATC 2 cut(s) 31, 441
MboII GAAGA 1 cut(s) 590
MfeI CAATTG 1 cut(s) 455
MluCI AATT 3 cut(s) 12, 147, 455
MnlI CCTC 4 cut(s) 35, 163, 422, 427
Mph1103I ATGCAT 1 cut(s) 547
MroNI GCCGGC 1 cut(s) 81
MseI TTAA 3 cut(s) 371, 627, 656
MspCI CTTAAG 1 cut(s) 626
MspI CCGG 1 cut(s) 82
MspR9I CCNGG 1 cut(s) 348
MunI CAATTG 1 cut(s) 455
MvaI CCWGG 1 cut(s) 348
NaeI GCCGGC 1 cut(s) 83
NdeII GATC 2 cut(s) 31, 441
NgoMIV GCCGGC 1 cut(s) 81
NlaIII CATG 1 cut(s) 524
NlaIV GGNNCC 1 cut(s) 68
NmuCI GTSAC 3 cut(s) 206, 254, 411
NsiI ATGCAT 1 cut(s) 547
PaeR7I CTCGAG 1 cut(s) 154
PdiI GCCGGC 1 cut(s) 83
PfeI GAWTC 2 cut(s) 267, 451
PflMI CCANNNNNTGG 1 cut(s) 131
PkrI GCNGC 1 cut(s) 559
PsiI TTATAA 1 cut(s) 618
Psp6I CCWGG 1 cut(s) 346
PspGI CCWGG 1 cut(s) 346
PspN4I GGNNCC 1 cut(s) 68
PspPI GGNCC 1 cut(s) 608
PspXI VCTCGAGB 1 cut(s) 154
RigI GGCCGGCC 1 cut(s) 85
RsaI GTAC 1 cut(s) 217
RsaNI GTAC 1 cut(s) 216
SaqAI TTAA 3 cut(s) 371, 627, 656
SatI GCNGC 1 cut(s) 558
Sau3AI GATC 2 cut(s) 31, 441
Sau96I GGNCC 1 cut(s) 608
ScrFI CCNGG 1 cut(s) 348
SetI ASST 8 cut(s) 155, 349, 381, 433, 487, 591, 613, 627
SexAI ACCWGGT 1 cut(s) 346
SfaNI GCATC 3 cut(s) 161, 287, 554
SfcI CTRYAG 1 cut(s) 46
Sfr274I CTCGAG 1 cut(s) 154
SinI GGWCC 1 cut(s) 608
SlaI CTCGAG 1 cut(s) 154
SmlI CTYRAG 2 cut(s) 154, 626
SmoI CTYRAG 2 cut(s) 154, 626
SpeI ACTAGT 1 cut(s) 218
Sse9I AATT 3 cut(s) 12, 147, 455
SsiI CCGC 3 cut(s) 337, 404, 416
SspMI CTAG 2 cut(s) 62, 219
StyD4I CCNGG 1 cut(s) 346
StyI CCWWGG 1 cut(s) 262
TaaI ACNGT 4 cut(s) 212, 230, 254, 320
TaqI TCGA 3 cut(s) 155, 270, 444
TasI AATT 3 cut(s) 12, 147, 455
TfiI GAWTC 2 cut(s) 267, 451
Tru1I TTAA 3 cut(s) 371, 627, 656
Tru9I TTAA 3 cut(s) 371, 627, 656
TscAI CASTG 2 cut(s) 41, 217
TseFI GTSAC 3 cut(s) 206, 254, 411
TseI GCWGC 1 cut(s) 557
Tsp45I GTSAC 3 cut(s) 206, 254, 411
TspDTI ATGAA 2 cut(s) 105, 513
TspRI CASTG 2 cut(s) 41, 217
Van91I CCANNNNNTGG 1 cut(s) 131
Vha464I CTTAAG 1 cut(s) 626
VpaK11BI GGWCC 1 cut(s) 608
XhoI CTCGAG 1 cut(s) 154
XspI CTAG 2 cut(s) 62, 219
Zsp2I ATGCAT 1 cut(s) 547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.