RLG00000032837

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
19651588 .. 19652339
752 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032837

Sequence Viewer

Length: 552 bp
ATGAACCCAAAAATTTCAGATTTTGGTATGGCAAGGATTTTCTCCATTAATGACCTAGAAGCAAATACTAGTAGGATTGTTGGGACACGTGGTTACATGCCTCCTGAGTATGCAATGAAAGGAATTTTCTCTACAAAATCCGATGTCTACAGTTTTGGAGTGTTAGTGCTTGAAATCATAAGTGGTAGGAGAAATAATAGCTTCTACAATGATGATCGAGCCATCAATTTAGTAGGATATGCATGGGAGTTGTGGAAAGAAGGCGTAGGGCTACAACTAATGGATCCAACACTAGCTGATTCGTGTACTAACAAGGATCAACTGTTAAGATGCGTTCAAGTTGGTCTTCTATGCGTGGAAGATAGTGCAGCGAATCGACCTACCATGTCAGATGTGCTCTCCTTGTTGACAAATGAAAGCTCACCATTACCTGCACCTACAAAGCCAGCATTTTCTATAGATAGATATGCGGTCACCGGTAGTATAGTTGAAAAGGAACCACAAATTTTATCTGTAAATGATATGACCATTTCTGATTATGATGGACGTTAA

Protein Analysis

184

Amino Acids

20.23

Weight (kDa)

4.69

Isoelectric Point (pI)

44.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 3 - 65 4e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 4 - 75 8.6e-13 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 439
AccI GTMKAC 1 cut(s) 147
AciI CCGC 1 cut(s) 470
AclWI GGATC 3 cut(s) 278, 291, 324
AcsI RAATTY 3 cut(s) 12, 123, 504
AcvI CACGTG 1 cut(s) 89
AfaI GTAC 1 cut(s) 307
AflIII ACRYGT 1 cut(s) 86
AgeI ACCGGT 1 cut(s) 476
AgsI TTSAA 3 cut(s) 173, 338, 491
AhlI ACTAGT 1 cut(s) 68
AluBI AGCT 3 cut(s) 201, 296, 420
AluI AGCT 3 cut(s) 201, 296, 420
Alw21I GWGCWC 1 cut(s) 399
AlwI GGATC 3 cut(s) 278, 291, 324
ApeKI GCWGC 1 cut(s) 368
ApoI RAATTY 3 cut(s) 12, 123, 504
AseI ATTAAT 1 cut(s) 48
AsiGI ACCGGT 1 cut(s) 476
AsuHPI GGTGA 2 cut(s) 414, 466
BamHI GGATCC 1 cut(s) 283
BbrPI CACGTG 1 cut(s) 89
BbsI GAAGAC 1 cut(s) 338
Bbv12I GWGCWC 1 cut(s) 399
BbvI GCAGC 1 cut(s) 380
BccI CCATC 2 cut(s) 230, 536
BcuI ACTAGT 1 cut(s) 68
BfaI CTAG 3 cut(s) 56, 69, 293
BfmI CTRYAG 2 cut(s) 148, 456
BfuAI ACCTGC 1 cut(s) 439
BisI GCNGC 1 cut(s) 369
BlsI GCNGC 1 cut(s) 370
BmiI GGNNCC 2 cut(s) 285, 498
BmsI GCATC 1 cut(s) 320
BpiI GAAGAC 1 cut(s) 338
BsaAI YACGTR 1 cut(s) 89
BsaWI WCCGGW 1 cut(s) 476
BsaXI ACNNNNNCTCC 2 cut(s) 150, 180
Bse118I RCCGGY 1 cut(s) 476
Bse3DI GCAATG 1 cut(s) 120
BseMI GCAATG 1 cut(s) 120
BseMII CTCAG 1 cut(s) 96
BseXI GCAGC 1 cut(s) 380
BsgI GTGCAG 2 cut(s) 387, 417
BshTI ACCGGT 1 cut(s) 476
BsiHKAI GWGCWC 1 cut(s) 399
BsiSI CCGG 1 cut(s) 477
BslFI GGGAC 1 cut(s) 97
BsmFI GGGAC 1 cut(s) 97
Bsp1286I GDGCHC 1 cut(s) 399
Bsp143I GATC 3 cut(s) 214, 283, 316
BspACI CCGC 1 cut(s) 470
BspCNI CTCAG 1 cut(s) 97
BspLI GGNNCC 2 cut(s) 285, 498
BspMI ACCTGC 1 cut(s) 439
BspPI GGATC 3 cut(s) 278, 291, 324
BsrDI GCAATG 1 cut(s) 120
BsrFI RCCGGY 1 cut(s) 476
BssAI RCCGGY 1 cut(s) 476
BssMI GATC 3 cut(s) 214, 283, 316
Bst4CI ACNGT 2 cut(s) 152, 324
BstBAI YACGTR 1 cut(s) 89
BstC8I GCNNGC 1 cut(s) 447
BstDEI CTNAG 1 cut(s) 105
BstEII GGTNACC 1 cut(s) 472
BstKTI GATC 3 cut(s) 217, 286, 319
BstMBI GATC 3 cut(s) 214, 283, 316
BstNSI RCATGY 1 cut(s) 100
BstPI GGTNACC 1 cut(s) 472
BstSFI CTRYAG 2 cut(s) 148, 456
BstV1I GCAGC 1 cut(s) 380
BstV2I GAAGAC 1 cut(s) 338
BstX2I RGATCY 1 cut(s) 283
BstYI RGATCY 1 cut(s) 283
BveI ACCTGC 1 cut(s) 439
Cac8I GCNNGC 1 cut(s) 447
Cfr10I RCCGGY 1 cut(s) 476
Csp6I GTAC 1 cut(s) 306
CspAI ACCGGT 1 cut(s) 476
CviAII CATG 3 cut(s) 97, 243, 385
CviJI RGCY 6 cut(s) 201, 221, 271, 296, 420, 445
CviKI_1 RGCY 6 cut(s) 201, 221, 271, 296, 420, 445
CviQI GTAC 1 cut(s) 306
DdeI CTNAG 1 cut(s) 105
DpnI GATC 3 cut(s) 216, 285, 318
DpnII GATC 3 cut(s) 214, 283, 316
Eco72I CACGTG 1 cut(s) 89
Eco91I GGTNACC 1 cut(s) 472
EcoO65I GGTNACC 1 cut(s) 472
EcoT22I ATGCAT 1 cut(s) 244
FaeI CATG 3 cut(s) 100, 246, 388
FalI AAGNNNNNCTT 2 cut(s) 330, 362
FaqI GGGAC 1 cut(s) 97
FatI CATG 3 cut(s) 96, 242, 384
FblI GTMKAC 1 cut(s) 147
Fnu4HI GCNGC 1 cut(s) 369
Fsp4HI GCNGC 1 cut(s) 369
FspBI CTAG 3 cut(s) 56, 69, 293
GluI GCNGC 1 cut(s) 369
HapII CCGG 1 cut(s) 477
Hin1II CATG 3 cut(s) 100, 246, 388
HincII GTYRAC 1 cut(s) 408
HindII GTYRAC 1 cut(s) 408
HinfI GANTC 2 cut(s) 299, 373
HpaII CCGG 1 cut(s) 477
HphI GGTGA 2 cut(s) 414, 466
Hpy166II GTNNAC 3 cut(s) 148, 306, 408
Hpy188I TCNGA 4 cut(s) 19, 142, 391, 535
Hpy188III TCNNGA 1 cut(s) 104
Hpy8I GTNNAC 3 cut(s) 148, 306, 408
HpyAV CCTTC 1 cut(s) 254
HpyCH4III ACNGT 2 cut(s) 152, 324
HpyCH4IV ACGT 2 cut(s) 88, 547
HpyCH4V TGCA 4 cut(s) 113, 242, 368, 434
HpyF3I CTNAG 1 cut(s) 105
HpySE526I ACGT 2 cut(s) 88, 547
Hsp92II CATG 3 cut(s) 100, 246, 388
Kzo9I GATC 3 cut(s) 214, 283, 316
LpnPI CCDG 4 cut(s) 117, 444, 459, 490
Lsp1109I GCAGC 1 cut(s) 380
LweI GCATC 1 cut(s) 320
MaeI CTAG 3 cut(s) 56, 69, 293
MaeII ACGT 2 cut(s) 88, 547
MaeIII GTNAC 2 cut(s) 92, 472
MalI GATC 3 cut(s) 216, 285, 318
MboI GATC 3 cut(s) 214, 283, 316
MboII GAAGA 2 cut(s) 338, 371
MflI RGATCY 1 cut(s) 283
MhlI GDGCHC 1 cut(s) 399
MluCI AATT 4 cut(s) 12, 123, 226, 504
MmeI TCCRAC 1 cut(s) 311
MnlI CCTC 1 cut(s) 111
Mph1103I ATGCAT 1 cut(s) 244
MseI TTAA 3 cut(s) 48, 326, 550
MspI CCGG 1 cut(s) 477
NdeII GATC 3 cut(s) 214, 283, 316
NlaIII CATG 3 cut(s) 100, 246, 388
NlaIV GGNNCC 2 cut(s) 285, 498
NmuCI GTSAC 1 cut(s) 472
NsiI ATGCAT 1 cut(s) 244
NspI RCATGY 1 cut(s) 100
PfeI GAWTC 2 cut(s) 299, 373
PinAI ACCGGT 1 cut(s) 476
PkrI GCNGC 1 cut(s) 370
PmaCI CACGTG 1 cut(s) 89
PmlI CACGTG 1 cut(s) 89
Ppu21I YACGTR 1 cut(s) 89
PshBI ATTAAT 1 cut(s) 48
PspCI CACGTG 1 cut(s) 89
PspEI GGTNACC 1 cut(s) 472
PspN4I GGNNCC 2 cut(s) 285, 498
PsuI RGATCY 1 cut(s) 283
RsaI GTAC 1 cut(s) 307
RsaNI GTAC 1 cut(s) 306
SaqAI TTAA 3 cut(s) 48, 326, 550
SatI GCNGC 1 cut(s) 369
Sau3AI GATC 3 cut(s) 214, 283, 316
SduI GDGCHC 1 cut(s) 399
SetI ASST 9 cut(s) 57, 91, 203, 298, 382, 422, 433, 439, 550
SfaNI GCATC 1 cut(s) 320
SfcI CTRYAG 2 cut(s) 148, 456
SpeI ACTAGT 1 cut(s) 68
Sse9I AATT 4 cut(s) 12, 123, 226, 504
SsiI CCGC 1 cut(s) 470
SspMI CTAG 3 cut(s) 56, 69, 293
TaaI ACNGT 2 cut(s) 152, 324
TaiI ACGT 2 cut(s) 91, 550
TaqI TCGA 2 cut(s) 217, 376
TasI AATT 4 cut(s) 12, 123, 226, 504
TatI WGTACW 1 cut(s) 305
TfiI GAWTC 2 cut(s) 299, 373
Tru1I TTAA 3 cut(s) 48, 326, 550
Tru9I TTAA 3 cut(s) 48, 326, 550
TseFI GTSAC 1 cut(s) 472
TseI GCWGC 1 cut(s) 368
Tsp45I GTSAC 1 cut(s) 472
TspDTI ATGAA 3 cut(s) 17, 131, 429
VspI ATTAAT 1 cut(s) 48
XapI RAATTY 3 cut(s) 12, 123, 504
XceI RCATGY 1 cut(s) 100
XmiI GTMKAC 1 cut(s) 147
XspI CTAG 3 cut(s) 56, 69, 293
Zsp2I ATGCAT 1 cut(s) 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.