Rw5G016180

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
20246258 .. 20250783
4526 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G016180.1

Sequence Viewer

Length: 2676 bp
ATGGCGTCCGACCACCGATTCTTAACATCGCCACTACTACTCGAACCACAACACAAACCCGACCCAAACCCAAAGAGAATCGATGATTGGCACGAGCCCAACCACTGTACACTATTTGCCATCTCTCCCTCTCCTCAAGCCTCGCCGCCTCTCCCAAAGTATCTTCTGATCATCAACCATGGTTTTAGGTTTGATCAACTCTTAATTTTCTTCCTGATCATTCTTCCAAGCTCGTGGAATTGTCATGTTGCTGCTGCAGCAGACAATATTGGGGACACACTCAAAGTAGGCGACACTATCAATTCCTCAAGCGCTTTAGTTTCCACCACTGGGAAGTTCACTTTGCTTTTCTTGCCCCTCAGTTCAGGTTCCAACTACAGCTATCTATATATTAGGCGGTACAATGTAAGTGGTGCGAATAGGGCTTGGGTTGGCAACCGAGACTCGCCTGTTCTATACCCTTTTGGAGTTCTTACCTTGGACTCCAACAACACATTAAAAATCATTACAAACAACGAAGGCGGCGGCGGCGATCCTCCTATAGTGCTTGGCTCCGTGCCAAAAAGTAGTAGTAATGTTGCGGCTACTCTGTTGGATTCTGGCAATTTTATCCTACAAGAGTTGAACTCCGATGGATCAACGAAGCAGGTGTGGTGGCAAAGTTTTGATTATCCAGCAGATACCTTTTTACCAGGCATGAAGTTAGGTGTCAACCGTAGCAACGGGCACATTTGGTCTCTTACGTCATGGACATCCGTTAGCTACCCACCGCCGGGGCCTTTCATCCTAGATTGGGACCCAACTGCCCGCCAATTGGAAATTCGAAGAGAAGGGGTGGTTTATTGGAGAAGCGGAAACTATAGTGCTACAAACAACAGATTCCAAAACATTTTGCCGAATGCAAAGGTTAGCTACAAGTTTAGCATTGTTTCAAATGAGAATGAAGACTACCTCACTTACACTTCTGAAGATGGTGCATATGAGTTACCAGAATGGATTCTAAATTATTATGGGAAGCTTTTTAATTATTATGGATCGGGAATTGATATTGCACGAGCAGATCAGTGTGGAGGCTACAACACAGATGGAGTAGGGTGCCAGACAACTAGCCGGCCAACCACTTGTATGGCGGATGTCCGCAGTCCATTTGGGCTAAAAAAAGGTTCCTTTAAACCAATCACCTCGAGTTCAACTTCAAGATGCCCATACTCGCTCAACTTTGTATCAAATGGAAGTCACAGTGGTACTAGTATTGACTGTAACAATACTTGTTTGCAGAACTGTGACTGCCTTGGATTCGACTTTCTATTTGATAATCAGACTGGATGCCGATTTTGGAGTGTGGACTGTCAGTTCGTTGAAGACCGCACTCAACCTGGTAATGCAAGCAATTTGGTTTTGACAAAGCTAATGCCAACGGCAAAATCACCACCGCCAAAGTCACCACCAAGCAAAAGTACAACGCATAAATGGATTTGGATTGGGGTTGCTATTAGTGCTGCTTTAGTGATGATGGCCTTTTCCATCTTGTGCTGTCTACGAAGAAGAAGAAGACAATCTAAACATTCAGGTGAGGGTAAGATCGACCAGAATGAATTGCTGAACTTCAGGAATTCTAAGAGGCCTACTGATTTGAATGAACTTCAAAATGATGGAAAGATGGGACATGATTTGAGCGTATTTAGCTATGCATCTGTAATGGCTGCCACAATCAACTTCGCTGAAGAAAACAAGCTTGGAGAAGGGGGCTTTGGACCTGTTTATAAGGGGAAATTGGCAACGGGACAAGAAGTAGCTGTGAAGAGGCTTTCAAAATGTTCAGGGCAAGGAACACTAGAGTTTAAGAATGAATTGATCCTCATACATGAACTTCAACATACAAACCTTGTCCAGCTTTTTGGATTTTGCATTCACGGTGAAGAGAGGATGTTGATATATGAGTACATGCCAAACAAAAGTCTGGACTACTTTTTATTTAATTCAATCAGAAGTGTTTTTCTAGATTGGAGCAAGCGTTTCAGCATAATTGAAGGAATCGCTCAAGGATTGCTTTATTTGCACAAATTCTCAAGAACAAGAGTAATTCATAGAGATTTAAAAGCCAGTAACATACTACTTGATGAAAATATGAACCCCAAAATTTCAGATTTTGGTATGGCTAGGATTTTCTCCATTAATGAACTAGAAGCAAATACTAGTAGGATTGTTGGGACACGTGGTTACATGCCTCCTGAGTACGCAATGGAAGGAATTTTCTCTACAAAATCCGATGTCTACAGTTTTGGAGTGTTAGTGCTTGAAATCACAAGTGGTAGGAGAAACAATAGCTTCTACAATGATGATCGCGCCATCAATTTAGTAGGATATGCATGGGAGTTGTGGAAAGAAGGCGCAGGGCTAGAACTAATGGATCCAACACTAGCTGATTCGTGTACTAACAAAGATCAACTGTTAAGATGCGTTCAAGTTGGTCTTCTATGCGTGGAGGATAGTGCAGCGAATCGACCTACCATGTCAGATGTGCTTTCCGGTTTGACAAATGAAAGCTCATTACCTGCACCTACAAAGCCAGCATTTTCTACAGATAGACATGCGATCACCAGTAGTATAGTTGAAAAGGAACCACAATCTTTATCTGTAAATGATCTGACCATTTCAGATTGTGATGGACGTTAA

Protein Analysis

891

Amino Acids

99.07

Weight (kDa)

6.31

Isoelectric Point (pI)

47.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 143 - 250 1.3e-23 D-mannose binding lectin
Pkinase PF00069 574 - 774 3.2e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 576 - 776 7.7e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1764
AarI CACCTGC 1 cut(s) 637
Acc36I ACCTGC 2 cut(s) 637, 2563
AccB1I GGYRCC 1 cut(s) 1095
AccI GTMKAC 2 cut(s) 1537, 2274
AccII CGCG 1 cut(s) 2346
AclWI GGATC 6 cut(s) 527, 643, 1042, 1849, 2405, 2418
AcoI YGGCCR 1 cut(s) 1112
AcsI RAATTY 5 cut(s) 819, 1612, 2063, 2139, 2250
AcuI CTGAAG 3 cut(s) 987, 1591, 1743
AcvI CACGTG 1 cut(s) 2216
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 7 cut(s) 109, 401, 1246, 1459, 1943, 2237, 2434
AfeI AGCGCT 1 cut(s) 313
AfiI CCNNNNNNNGG 5 cut(s) 330, 772, 773, 793, 814
AflIII ACRYGT 1 cut(s) 2213
AhlI ACTAGT 2 cut(s) 1247, 2195
AjnI CCWGG 2 cut(s) 691, 1375
AjuI GAANNNNNNNTTGG 8 cut(s) 70, 102, 804, 836, 1719, 1734, 1751, 1766
AloI GAACNNNNNNTCC 2 cut(s) 1337, 1369
Alw26I GTCTC 2 cut(s) 435, 741
AlwI GGATC 6 cut(s) 527, 643, 1042, 1849, 2405, 2418
Ama87I CYCGRG 1 cut(s) 1183
Aor51HI AGCGCT 1 cut(s) 313
AoxI GGCC 4 cut(s) 776, 1112, 1515, 1622
ApeKI GCWGC 6 cut(s) 251, 254, 257, 1499, 1703, 2495
ApoI RAATTY 5 cut(s) 819, 1612, 2063, 2139, 2250
ArsI GACNNNNNNTTYG 4 cut(s) 1292, 1324, 1337, 1369
AseI ATTAAT 1 cut(s) 2175
Asp700I GAANNNNTTC 1 cut(s) 996
AspLEI GCGC 3 cut(s) 314, 2348, 2393
AspS9I GGNCC 3 cut(s) 776, 796, 1754
AsuC2I CCSGG 1 cut(s) 774
AsuHPI GGTGA 6 cut(s) 1171, 1419, 1434, 1583, 1928, 2590
AsuII TTCGAA 1 cut(s) 823
AvaI CYCGRG 1 cut(s) 1183
AvaII GGWCC 2 cut(s) 796, 1754
BaeGI GKGCMC 1 cut(s) 729
BamHI GGATCC 1 cut(s) 2410
BanI GGYRCC 1 cut(s) 1095
BanII GRGCYC 1 cut(s) 99
BauI CACGAG 3 cut(s) 92, 232, 1053
BbrPI CACGTG 1 cut(s) 2216
BbsI GAAGAC 4 cut(s) 951, 1368, 1558, 2465
BbvI GCAGC 6 cut(s) 238, 241, 269, 1486, 1690, 2507
BceAI ACGGC 1 cut(s) 1434
BciT130I CCWGG 2 cut(s) 693, 1377
BclI TGATCA 3 cut(s) 168, 193, 216
BcnI CCSGG 1 cut(s) 774
BcoDI GTCTC 2 cut(s) 435, 741
BcuI ACTAGT 2 cut(s) 1247, 2195
BfmI CTRYAG 6 cut(s) 255, 376, 540, 859, 2275, 2580
BfoI RGCGCY 1 cut(s) 315
BfuAI ACCTGC 2 cut(s) 637, 2563
Bme1390I CCNGG 3 cut(s) 693, 774, 1377
Bme18I GGWCC 2 cut(s) 796, 1754
BmeT110I CYCGRG 1 cut(s) 1183
BmgT120I GGNCC 3 cut(s) 776, 796, 1754
BmiI GGNNCC 9 cut(s) 370, 553, 777, 797, 798, 1097, 1165, 2412, 2622
BmrFI CCNGG 3 cut(s) 693, 774, 1377
BmrI ACTGGG 1 cut(s) 339
BmsI GCATC 4 cut(s) 1190, 1316, 1700, 2447
BmuI ACTGGG 1 cut(s) 339
BpiI GAAGAC 4 cut(s) 951, 1368, 1558, 2465
BplI GAGNNNNNCTC 2 cut(s) 611, 643
Bpu14I TTCGAA 1 cut(s) 823
BpuEI CTTGAG 4 cut(s) 120, 292, 2025, 2053
BpuMI CCSGG 1 cut(s) 774
Bsa29I ATCGAT 1 cut(s) 81
BsaAI YACGTR 1 cut(s) 2216
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 741
BsaJI CCNNGG 4 cut(s) 178, 477, 773, 1291
BsaWI WCCGGW 1 cut(s) 2528
BsaXI ACNNNNNCTCC 4 cut(s) 1999, 2029, 2277, 2307
Bsc4I CCNNNNNNNGG 5 cut(s) 330, 772, 773, 793, 814
Bse118I RCCGGY 1 cut(s) 1110
Bse1I ACTGG 4 cut(s) 334, 1327, 2103, 2601
Bse3DI GCAATG 1 cut(s) 2247
BseBI CCWGG 2 cut(s) 693, 1377
BseCI ATCGAT 1 cut(s) 81
BseDI CCNNGG 4 cut(s) 178, 477, 773, 1291
BseGI GGATG 5 cut(s) 752, 783, 1138, 1331, 1932
BseLI CCNNNNNNNGG 5 cut(s) 330, 772, 773, 793, 814
BseMI GCAATG 1 cut(s) 2247
BseMII CTCAG 2 cut(s) 373, 2223
BseNI ACTGG 4 cut(s) 334, 1327, 2103, 2601
BseRI GAGGAG 1 cut(s) 123
BseSI GKGCMC 1 cut(s) 729
BseXI GCAGC 6 cut(s) 238, 241, 269, 1486, 1690, 2507
BsgI GTGCAG 2 cut(s) 2514, 2541
Bsh1236I CGCG 1 cut(s) 2346
BshFI GGCC 4 cut(s) 778, 1114, 1517, 1624
BshNI GGYRCC 1 cut(s) 1095
BshVI ATCGAT 1 cut(s) 81
BsiHKCI CYCGRG 1 cut(s) 1183
BsiSI CCGG 3 cut(s) 773, 1111, 2529
BslFI GGGAC 5 cut(s) 287, 809, 1677, 1797, 2224
BslI CCNNNNNNNGG 5 cut(s) 330, 772, 773, 793, 814
BsmAI GTCTC 2 cut(s) 435, 741
BsmFI GGGAC 5 cut(s) 287, 809, 1677, 1797, 2224
BsmI GAATGC 2 cut(s) 904, 1908
BsnI GGCC 4 cut(s) 778, 1114, 1517, 1624
Bso31I GGTCTC 1 cut(s) 741
BsoBI CYCGRG 1 cut(s) 1183
Bsp119I TTCGAA 1 cut(s) 823
Bsp1286I GDGCHC 2 cut(s) 99, 729
Bsp1407I TGTACA 1 cut(s) 107
Bsp19I CCATGG 1 cut(s) 178
BspANI GGCC 4 cut(s) 778, 1114, 1517, 1624
BspCNI CTCAG 2 cut(s) 372, 2224
BspDI ATCGAT 1 cut(s) 81
BspFNI CGCG 1 cut(s) 2346
BspLI GGNNCC 9 cut(s) 370, 553, 777, 797, 798, 1097, 1165, 2412, 2622
BspMAI CTGCAG 1 cut(s) 259
BspMI ACCTGC 2 cut(s) 637, 2563
BspPI GGATC 6 cut(s) 527, 643, 1042, 1849, 2405, 2418
BspT104I TTCGAA 1 cut(s) 823
BspT107I GGYRCC 1 cut(s) 1095
BspTNI GGTCTC 1 cut(s) 741
BsrDI GCAATG 1 cut(s) 2247
BsrFI RCCGGY 1 cut(s) 1110
BsrGI TGTACA 1 cut(s) 107
BsrI ACTGG 4 cut(s) 334, 1327, 2103, 2601
BssAI RCCGGY 1 cut(s) 1110
BssECI CCNNGG 4 cut(s) 178, 477, 773, 1291
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 3 cut(s) 92, 232, 1053
BssT1I CCWWGG 3 cut(s) 178, 477, 1291
Bst2BI CACGAG 3 cut(s) 92, 232, 1053
Bst2UI CCWGG 2 cut(s) 693, 1377
Bst4CI ACNGT 9 cut(s) 107, 716, 1241, 1259, 1283, 1349, 1916, 2279, 2451
Bst6I CTCTTC 3 cut(s) 820, 1796, 1914
BstACI GRCGYC 1 cut(s) 5
BstAUI TGTACA 1 cut(s) 107
BstBAI YACGTR 1 cut(s) 2216
BstBI TTCGAA 1 cut(s) 823
BstC8I GCNNGC 5 cut(s) 808, 1112, 1387, 2012, 2571
BstDEI CTNAG 3 cut(s) 359, 1617, 2232
BstDSI CCRYGG 1 cut(s) 178
BstF5I GGATG 5 cut(s) 752, 783, 1138, 1331, 1932
BstFNI CGCG 1 cut(s) 2346
BstH2I RGCGCY 1 cut(s) 315
BstHHI GCGC 3 cut(s) 314, 2348, 2393
BstMAI GTCTC 2 cut(s) 435, 741
BstMWI GCNNNNNNNGC 7 cut(s) 257, 352, 422, 528, 1496, 1683, 2056
BstNI CCWGG 2 cut(s) 693, 1377
BstNSI RCATGY 3 cut(s) 1948, 2227, 2594
BstSCI CCNGG 3 cut(s) 691, 772, 1375
BstSFI CTRYAG 6 cut(s) 255, 376, 540, 859, 2275, 2580
BstSLI GKGCMC 1 cut(s) 729
BstUI CGCG 1 cut(s) 2346
BstV1I GCAGC 6 cut(s) 238, 241, 269, 1486, 1690, 2507
BstV2I GAAGAC 4 cut(s) 951, 1368, 1558, 2465
BstX2I RGATCY 1 cut(s) 2410
BstXI CCANNNNNNTGG 3 cut(s) 234, 1126, 1898
BstYI RGATCY 1 cut(s) 2410
Bsu15I ATCGAT 1 cut(s) 81
BsuRI GGCC 4 cut(s) 778, 1114, 1517, 1624
BsuTUI ATCGAT 1 cut(s) 81
BtgI CCRYGG 1 cut(s) 178
BtgZI GCGATG 1 cut(s) 12
BtsCI GGATG 5 cut(s) 752, 783, 1138, 1331, 1932
BtsIMutI CAGTG 4 cut(s) 103, 327, 1070, 1246
BveI ACCTGC 2 cut(s) 637, 2563
Cac8I GCNNGC 5 cut(s) 808, 1112, 1387, 2012, 2571
CfoI GCGC 3 cut(s) 314, 2348, 2393
Cfr10I RCCGGY 1 cut(s) 1110
Cfr13I GGNCC 3 cut(s) 776, 796, 1754
ClaI ATCGAT 1 cut(s) 81
CsiI ACCWGGT 1 cut(s) 1375
Csp6I GTAC 7 cut(s) 108, 400, 1245, 1458, 1942, 2236, 2433
CspCI CAANNNNNGTGG 2 cut(s) 391, 426
CviQI GTAC 7 cut(s) 108, 400, 1245, 1458, 1942, 2236, 2433
DdeI CTNAG 3 cut(s) 359, 1617, 2232
DraI TTTAAA 2 cut(s) 1171, 2097
EaeI YGGCCR 1 cut(s) 1112
Eam1104I CTCTTC 3 cut(s) 820, 1796, 1914
EarI CTCTTC 3 cut(s) 820, 1796, 1914
EciI GGCGGA 1 cut(s) 1145
Eco130I CCWWGG 3 cut(s) 178, 477, 1291
Eco147I AGGCCT 1 cut(s) 1624
Eco24I GRGCYC 1 cut(s) 99
Eco31I GGTCTC 1 cut(s) 741
Eco47I GGWCC 2 cut(s) 796, 1754
Eco47III AGCGCT 1 cut(s) 313
Eco57I CTGAAG 3 cut(s) 987, 1591, 1743
Eco72I CACGTG 1 cut(s) 2216
Eco88I CYCGRG 1 cut(s) 1183
EcoO109I RGGNCCY 2 cut(s) 776, 796
EcoRI GAATTC 1 cut(s) 1612
EcoRII CCWGG 2 cut(s) 691, 1375
EcoT14I CCWWGG 3 cut(s) 178, 477, 1291
EcoT22I ATGCAT 2 cut(s) 1693, 2371
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 3 cut(s) 178, 477, 1291
FalI AAGNNNNNCTT 4 cut(s) 2034, 2066, 2457, 2489
FaqI GGGAC 5 cut(s) 287, 809, 1677, 1797, 2224
FauI CCCGC 1 cut(s) 815
FauNDI CATATG 1 cut(s) 979
FbaI TGATCA 3 cut(s) 168, 193, 216
FblI GTMKAC 2 cut(s) 1537, 2274
FokI GGATG 5 cut(s) 739, 770, 1145, 1338, 1939
FriOI GRGCYC 1 cut(s) 99
GlaI GCGC 3 cut(s) 313, 2347, 2392
HaeII RGCGCY 1 cut(s) 315
HaeIII GGCC 4 cut(s) 778, 1114, 1517, 1624
HapII CCGG 3 cut(s) 773, 1111, 2529
HhaI GCGC 3 cut(s) 314, 2348, 2393
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 3 cut(s) 312, 2346, 2391
HinP1I GCGC 3 cut(s) 312, 2346, 2391
HincII GTYRAC 1 cut(s) 712
HindII GTYRAC 1 cut(s) 712
HindIII AAGCTT 2 cut(s) 1016, 1733
HpaII CCGG 3 cut(s) 773, 1111, 2529
HphI GGTGA 6 cut(s) 1171, 1419, 1434, 1583, 1928, 2590
Hpy166II GTNNAC 7 cut(s) 110, 339, 712, 1345, 1538, 2275, 2433
Hpy188III TCNNGA 8 cut(s) 214, 1038, 1197, 1609, 1961, 2000, 2070, 2231
Hpy8I GTNNAC 7 cut(s) 110, 339, 712, 1345, 1538, 2275, 2433
HpyAV CCTTC 6 cut(s) 512, 824, 1736, 2024, 2240, 2381
HpyCH4III ACNGT 9 cut(s) 107, 716, 1241, 1259, 1283, 1349, 1916, 2279, 2451
HpyCH4IV ACGT 3 cut(s) 743, 2215, 2671
HpyF10VI GCNNNNNNNGC 7 cut(s) 257, 352, 422, 528, 1496, 1683, 2056
HpyF3I CTNAG 3 cut(s) 359, 1617, 2232
HpySE526I ACGT 3 cut(s) 743, 2215, 2671
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 3 cut(s) 312, 2346, 2391
KflI GGGWCCC 1 cut(s) 796
KroI GCCGGC 1 cut(s) 1110
KroNI GCCGGC 1 cut(s) 1112
Ksp22I TGATCA 3 cut(s) 168, 193, 216
LmnI GCTCC 2 cut(s) 557, 2007
Lsp1109I GCAGC 6 cut(s) 238, 241, 269, 1486, 1690, 2507
LweI GCATC 4 cut(s) 1190, 1316, 1700, 2447
MabI ACCWGGT 1 cut(s) 1375
MaeII ACGT 3 cut(s) 743, 2215, 2671
MaeIII GTNAC 7 cut(s) 984, 1235, 1259, 1283, 1440, 2105, 2219
MfeI CAATTG 1 cut(s) 812
MflI RGATCY 1 cut(s) 2410
MhlI GDGCHC 2 cut(s) 99, 729
MlyI GAGTC 2 cut(s) 437, 476
MmeI TCCRAC 5 cut(s) 33, 396, 510, 573, 2438
Mph1103I ATGCAT 2 cut(s) 1693, 2371
MroNI GCCGGC 1 cut(s) 1110
MroXI GAANNNNTTC 1 cut(s) 996
MslI CAYNNNNRTG 2 cut(s) 1124, 1569
MspI CCGG 3 cut(s) 773, 1111, 2529
MspR9I CCNGG 3 cut(s) 693, 774, 1377
MunI CAATTG 1 cut(s) 812
Mva1269I GAATGC 2 cut(s) 904, 1908
MvaI CCWGG 2 cut(s) 693, 1377
MvnI CGCG 1 cut(s) 2346
MwoI GCNNNNNNNGC 7 cut(s) 257, 352, 422, 528, 1496, 1683, 2056
NaeI GCCGGC 1 cut(s) 1112
NciI CCSGG 1 cut(s) 774
NcoI CCATGG 1 cut(s) 178
NdeI CATATG 1 cut(s) 979
NgoMIV GCCGGC 1 cut(s) 1110
NlaIV GGNNCC 9 cut(s) 370, 553, 777, 797, 798, 1097, 1165, 2412, 2622
NmuCI GTSAC 3 cut(s) 1235, 1283, 1440
NsiI ATGCAT 2 cut(s) 1693, 2371
NspI RCATGY 3 cut(s) 1948, 2227, 2594
NspV TTCGAA 1 cut(s) 823
PaeR7I CTCGAG 1 cut(s) 1183
PaqCI CACCTGC 1 cut(s) 637
PceI AGGCCT 1 cut(s) 1624
PctI GAATGC 2 cut(s) 904, 1908
PdiI GCCGGC 1 cut(s) 1112
PdmI GAANNNNTTC 1 cut(s) 996
PfeI GAWTC 9 cut(s) 18, 78, 596, 879, 997, 1296, 2034, 2426, 2500
PleI GAGTC 2 cut(s) 437, 476
PmaCI CACGTG 1 cut(s) 2216
PmlI CACGTG 1 cut(s) 2216
PpsI GAGTC 2 cut(s) 437, 476
Ppu21I YACGTR 1 cut(s) 2216
PpuMI RGGWCCY 1 cut(s) 796
PshBI ATTAAT 1 cut(s) 2175
PsiI TTATAA 1 cut(s) 1764
Psp5II RGGWCCY 1 cut(s) 796
Psp6I CCWGG 2 cut(s) 691, 1375
PspCI CACGTG 1 cut(s) 2216
PspGI CCWGG 2 cut(s) 691, 1375
PspN4I GGNNCC 9 cut(s) 370, 553, 777, 797, 798, 1097, 1165, 2412, 2622
PspPI GGNCC 3 cut(s) 776, 796, 1754
PspPPI RGGWCCY 1 cut(s) 796
PspXI VCTCGAGB 1 cut(s) 1183
PstI CTGCAG 1 cut(s) 259
PsuI RGATCY 1 cut(s) 2410
RsaI GTAC 7 cut(s) 109, 401, 1246, 1459, 1943, 2237, 2434
RsaNI GTAC 7 cut(s) 108, 400, 1245, 1458, 1942, 2236, 2433
RseI CAYNNNNRTG 2 cut(s) 1124, 1569
Sau96I GGNCC 3 cut(s) 776, 796, 1754
SchI GAGTC 2 cut(s) 437, 476
ScrFI CCNGG 3 cut(s) 693, 774, 1377
SduI GDGCHC 2 cut(s) 99, 729
SexAI ACCWGGT 1 cut(s) 1375
SfaNI GCATC 4 cut(s) 1190, 1316, 1700, 2447
SfcI CTRYAG 6 cut(s) 255, 376, 540, 859, 2275, 2580
Sfr274I CTCGAG 1 cut(s) 1183
SfuI TTCGAA 1 cut(s) 823
SinI GGWCC 2 cut(s) 796, 1754
SlaI CTCGAG 1 cut(s) 1183
SmiMI CAYNNNNRTG 2 cut(s) 1124, 1569
SmlI CTYRAG 5 cut(s) 135, 307, 1183, 2040, 2068
SmoI CTYRAG 5 cut(s) 135, 307, 1183, 2040, 2068
SpeI ACTAGT 2 cut(s) 1247, 2195
SseBI AGGCCT 1 cut(s) 1624
SspI AATATT 1 cut(s) 268
StuI AGGCCT 1 cut(s) 1624
StyD4I CCNGG 3 cut(s) 691, 772, 1375
StyI CCWWGG 3 cut(s) 178, 477, 1291
TaaI ACNGT 9 cut(s) 107, 716, 1241, 1259, 1283, 1349, 1916, 2279, 2451
TaiI ACGT 3 cut(s) 746, 2218, 2674
TaqI TCGA 7 cut(s) 42, 81, 823, 1184, 1299, 1584, 2503
TatI WGTACW 4 cut(s) 107, 1457, 1941, 2432
TauI GCSGC 5 cut(s) 148, 525, 528, 531, 584
TfiI GAWTC 9 cut(s) 18, 78, 596, 879, 997, 1296, 2034, 2426, 2500
TscAI CASTG 4 cut(s) 110, 334, 1070, 1246
TseFI GTSAC 3 cut(s) 1235, 1283, 1440
TseI GCWGC 6 cut(s) 251, 254, 257, 1499, 1703, 2495
Tsp45I GTSAC 3 cut(s) 1235, 1283, 1440
TspGWI ACGGA 2 cut(s) 544, 745
TspRI CASTG 4 cut(s) 110, 334, 1070, 1246
VpaK11BI GGWCC 2 cut(s) 796, 1754
VspI ATTAAT 1 cut(s) 2175
XapI RAATTY 5 cut(s) 819, 1612, 2063, 2139, 2250
XbaI TCTAGA 1 cut(s) 1999
XceI RCATGY 3 cut(s) 1948, 2227, 2594
XhoI CTCGAG 1 cut(s) 1183
XmiI GTMKAC 2 cut(s) 1537, 2274
XmnI GAANNNNTTC 1 cut(s) 996
Zsp2I ATGCAT 2 cut(s) 1693, 2371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.