RLG00000032826

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000096
Physical Location & Seq
Forward (+)
19471768 .. 19477036
5269 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032826

Sequence Viewer

Length: 1671 bp
ATGATAGCCGCTCCTCACTACCAACAACCCGAAGTTCGAGTCTTGAAGAAGAGAAATCATAGGTTTGACCTCCGCCCAAGTTCTCTATTTGACATCAAGTTGATTTTTTTTTTACCATCTTTCAGTTTTGGGTCAGTTGGGTTTTATGGTCTTTGGGAGAAAGGTGGGGGAATTGGGTTGAAGGTGTTTGCTGAAAGCCTGAAAGTCCTCACTGAGAATGAAAGGAATTTAGGAAGGGACCCAAGCTTCGACGCATTTTCCACACAAGTGGATAAGCAGTTGGTTTCCAAGACTCCTTACATCCCAAACTTGTATAGAGGGCAGGAACATCCTTACATTGTTTGCTTTGACATTGCCAAGAAAATTCCAGCATTACCCTCCTCTATATCAAAGCCACCCCATTTGCAGTCTCTTTCTCTTTACCTCGAAATTTCAGTTGGAAAAAAGCTCACTTCTTGTCCGAGGCATTATGACGAGCTCCTTCCAGGCAGTTTACTAGTGGTTACTCACAGAGATGGGGATGCTCTGGTGCTTTACTCTGCTGATTCGGAGACTATCAGTGGTGATGCTGTGGCTACTCTTATGGATGATGGGAATTTTGTGCTGCAAGAAGTGAGCTCTGATGGATCGGCGAAGAGGGTTTTGTGGCAGAGTTTTGATTATCCGGGAGATGTGCTTCTGCCAGGTATGAAATTAGGGGTCAACCGTAGTAGTGGCCGCAATTGGTCACTGTCGTGCTGGTTTACTGAGAGAAGTGCGGGGAAATTGGTGACCGGACAAGAAGTGGCAGTGAAGAGACTTTCAAAACGTTCAGGACAGGGAATATCGGAGTTTAAGAATGAGTTGATACTTATACATGAACTCCAACATACAAACCTTGTTAAGCTCTTCGGATTTTGCATTCATGGTGAAGAGAGGATGTTGATATATGAGTACATGACAAACAAAAGCTTGGCCCACTTTTTATTTGATTCAACTAGATGCCAGCAGCTAGATTGGAACAAACGTTTCAACATAATTGAAGGAATTGCTCAAGGTTTGGTTTACTTGCACAAATATTCCAGAATGAGAGTAATTCATAGAGATTTGAAGGCAAGTAATGTTTTGCTTGATGAAAGGATGAATCCAAAAATTTCTGACTTTGGAATGGCAAGGATTTTCATGAATGATGAACAAGAAGCAAATACTATGAAGATTGTTGGGACACGTGGTTATATGTCCCCTGAGTATGTTATGGGGGGAAATTTTTCCACAAAATCGGATGTCTATAGTTTCGGAGTGTTAATGCTTGAAATCCTAAGTGGTAGGAGAAACAACAGCTTCCACAATGATGATCGCGCCTTCAACTTAGTTGACTATGCATGGGCGTTATGGAAAGAAGGTGCAGGACTAGGATTAATGGATCCGACACTTGGCGATTCATGTGATAAAGTTCAATTGTTGAGGTGCATCCATGTTGGTTTGCTATGCGTGGAGGAAAATGCAGCTAGTCGACCCACGATGTTAGATGTGATACCTATGCTGACCAATGAAAGCATGTCTTTACTAGTTCCTACAAAACCAGCATTCTGTACAGAAAGAAATGTGATCACAAATGCTATAAGTGCAAGCGGATCGGAAACGGTTTCATCTATAAATGCTCTATCCAATTCTGGTTTTGATGGGCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr

Protein Analysis

557

Amino Acids

62.29

Weight (kDa)

7.21

Isoelectric Point (pI)

45.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 164 - 247 6.6e-18 D-mannose binding lectin
Pkinase PF00069 257 - 445 2.5e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 258 - 437 1.6e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 11
AccI GTMKAC 1 cut(s) 1492
AccII CGCG 1 cut(s) 1338
AciI CCGC 5 cut(s) 9, 73, 718, 758, 1611
AclI AACGTT 2 cut(s) 808, 1006
AclWI GGATC 4 cut(s) 634, 1397, 1410, 1621
AcoI YGGCCR 1 cut(s) 715
AcsI RAATTY 6 cut(s) 226, 363, 429, 595, 1131, 1243
AcvI CACGTG 1 cut(s) 1208
AfaI GTAC 2 cut(s) 935, 1573
AfiI CCNNNNNNNGG 1 cut(s) 1412
AflIII ACRYGT 1 cut(s) 1205
AhlI ACTAGT 2 cut(s) 496, 1546
AjnI CCWGG 2 cut(s) 484, 682
AjuI GAANNNNNNNTTGG 2 cut(s) 420, 452
AleI CACNNNNGTG 2 cut(s) 266, 733
AluBI AGCT 9 cut(s) 246, 448, 478, 618, 886, 951, 991, 1320, 1487
AluI AGCT 9 cut(s) 246, 448, 478, 618, 886, 951, 991, 1320, 1487
Alw21I GWGCWC 2 cut(s) 480, 620
Alw26I GTCTC 3 cut(s) 414, 545, 790
AlwI GGATC 4 cut(s) 634, 1397, 1410, 1621
AoxI GGCC 2 cut(s) 715, 954
ApeKI GCWGC 3 cut(s) 604, 988, 1484
ApoI RAATTY 6 cut(s) 226, 363, 429, 595, 1131, 1243
ArsI GACNNNNNNTTYG 4 cut(s) 24, 56, 230, 262
AseI ATTAAT 1 cut(s) 1397
Asp700I GAANNNNTTC 1 cut(s) 1246
AspLEI GCGC 1 cut(s) 1340
AspS9I GGNCC 2 cut(s) 238, 955
AsuC2I CCSGG 1 cut(s) 666
AsuHPI GGTGA 3 cut(s) 575, 781, 920
AvaII GGWCC 1 cut(s) 238
BamHI GGATCC 1 cut(s) 1402
BanII GRGCYC 2 cut(s) 480, 620
BbrPI CACGTG 1 cut(s) 1208
Bbv12I GWGCWC 2 cut(s) 480, 620
BbvI GCAGC 3 cut(s) 591, 1000, 1496
BccI CCATC 5 cut(s) 124, 509, 584, 617, 1655
BcgI CGANNNNNNTGC 2 cut(s) 1596, 1630
BciT130I CCWGG 2 cut(s) 486, 684
BclI TGATCA 1 cut(s) 1587
BcnI CCSGG 1 cut(s) 666
BcoDI GTCTC 3 cut(s) 414, 545, 790
BcuI ACTAGT 2 cut(s) 496, 1546
BfaI CTAG 6 cut(s) 497, 978, 992, 1391, 1488, 1547
BfmI CTRYAG 1 cut(s) 1267
BisI GCNGC 5 cut(s) 9, 605, 718, 989, 1485
BlsI GCNGC 5 cut(s) 10, 606, 719, 990, 1486
Bme1390I CCNGG 3 cut(s) 486, 666, 684
Bme18I GGWCC 1 cut(s) 238
BmgT120I GGNCC 2 cut(s) 238, 955
BmiI GGNNCC 3 cut(s) 239, 240, 1404
BmrFI CCNGG 3 cut(s) 486, 666, 684
BmsI GCATC 4 cut(s) 511, 556, 971, 1458
BpuEI CTTGAG 1 cut(s) 1017
BpuMI CCSGG 1 cut(s) 666
BsaAI YACGTR 1 cut(s) 1208
BsaJI CCNNGG 1 cut(s) 461
BsaWI WCCGGW 1 cut(s) 773
BsaXI ACNNNNNCTCC 2 cut(s) 846, 876
Bsc4I CCNNNNNNNGG 1 cut(s) 1412
Bse3DI GCAATG 1 cut(s) 351
BseBI CCWGG 2 cut(s) 486, 684
BseDI CCNNGG 1 cut(s) 461
BseGI GGATG 8 cut(s) 300, 328, 526, 592, 924, 1125, 1267, 1449
BseLI CCNNNNNNNGG 1 cut(s) 1412
BseMI GCAATG 1 cut(s) 351
BseMII CTCAG 3 cut(s) 204, 738, 1215
BseRI GAGGAG 1 cut(s) 370
BseXI GCAGC 3 cut(s) 591, 1000, 1496
BsgI GTGCAG 1 cut(s) 1404
Bsh1236I CGCG 1 cut(s) 1338
BshFI GGCC 2 cut(s) 717, 956
BsiHKAI GWGCWC 2 cut(s) 480, 620
BsiSI CCGG 2 cut(s) 665, 774
BslFI GGGAC 3 cut(s) 251, 1204, 1216
BslI CCNNNNNNNGG 1 cut(s) 1412
BsmAI GTCTC 3 cut(s) 414, 545, 790
BsmFI GGGAC 3 cut(s) 251, 1204, 1216
BsmI GAATGC 2 cut(s) 900, 1565
BsnI GGCC 2 cut(s) 717, 956
Bsp1286I GDGCHC 2 cut(s) 480, 620
Bsp1407I TGTACA 1 cut(s) 1571
Bsp143I GATC 5 cut(s) 626, 1333, 1402, 1587, 1613
BspACI CCGC 5 cut(s) 9, 73, 718, 758, 1611
BspANI GGCC 2 cut(s) 717, 956
BspCNI CTCAG 3 cut(s) 205, 739, 1216
BspFNI CGCG 1 cut(s) 1338
BspHI TCATGA 1 cut(s) 1161
BspLI GGNNCC 3 cut(s) 239, 240, 1404
BspPI GGATC 4 cut(s) 634, 1397, 1410, 1621
BspQI GCTCTTC 1 cut(s) 893
BsrBI CCGCTC 1 cut(s) 11
BsrDI GCAATG 1 cut(s) 351
BsrGI TGTACA 1 cut(s) 1571
BssECI CCNNGG 1 cut(s) 461
BssMI GATC 5 cut(s) 626, 1333, 1402, 1587, 1613
Bst2UI CCWGG 2 cut(s) 486, 684
Bst4CI ACNGT 3 cut(s) 707, 732, 1624
Bst6I CTCTTC 5 cut(s) 44, 629, 788, 893, 906
BstAUI TGTACA 1 cut(s) 1571
BstBAI YACGTR 1 cut(s) 1208
BstC8I GCNNGC 2 cut(s) 986, 1609
BstDEI CTNAG 5 cut(s) 213, 747, 1224, 1298, 1348
BstEII GGTNACC 1 cut(s) 769
BstF5I GGATG 8 cut(s) 300, 328, 526, 592, 924, 1125, 1267, 1449
BstFNI CGCG 1 cut(s) 1338
BstHHI GCGC 1 cut(s) 1340
BstKTI GATC 5 cut(s) 629, 1336, 1405, 1590, 1616
BstMAI GTCTC 3 cut(s) 414, 545, 790
BstMBI GATC 5 cut(s) 626, 1333, 1402, 1587, 1613
BstMWI GCNNNNNNNGC 1 cut(s) 1604
BstNI CCWGG 2 cut(s) 486, 684
BstNSI RCATGY 1 cut(s) 1540
BstPI GGTNACC 1 cut(s) 769
BstSCI CCNGG 3 cut(s) 484, 664, 682
BstSFI CTRYAG 1 cut(s) 1267
BstUI CGCG 1 cut(s) 1338
BstV1I GCAGC 3 cut(s) 591, 1000, 1496
BstX2I RGATCY 1 cut(s) 1402
BstXI CCANNNNNNTGG 1 cut(s) 268
BstYI RGATCY 1 cut(s) 1402
BsuRI GGCC 2 cut(s) 717, 956
BtsCI GGATG 8 cut(s) 300, 328, 526, 592, 924, 1125, 1267, 1449
BtsI GCAGTG 1 cut(s) 795
BtsIMutI CAGTG 4 cut(s) 210, 565, 728, 795
Cac8I GCNNGC 2 cut(s) 986, 1609
CciI TCATGA 1 cut(s) 1161
CfoI GCGC 1 cut(s) 1340
Cfr13I GGNCC 2 cut(s) 238, 955
CseI GACGC 1 cut(s) 260
Csp6I GTAC 2 cut(s) 934, 1572
CspCI CAANNNNNGTGG 2 cut(s) 384, 419
CviAII CATG 8 cut(s) 857, 905, 937, 1162, 1362, 1422, 1454, 1537
CviQI GTAC 2 cut(s) 934, 1572
DdeI CTNAG 5 cut(s) 213, 747, 1224, 1298, 1348
DpnI GATC 5 cut(s) 628, 1335, 1404, 1589, 1615
DpnII GATC 5 cut(s) 626, 1333, 1402, 1587, 1613
EaeI YGGCCR 1 cut(s) 715
Eam1104I CTCTTC 5 cut(s) 44, 629, 788, 893, 906
EarI CTCTTC 5 cut(s) 44, 629, 788, 893, 906
EciI GGCGGA 1 cut(s) 62
Ecl136II GAGCTC 2 cut(s) 478, 618
Eco24I GRGCYC 2 cut(s) 480, 620
Eco47I GGWCC 1 cut(s) 238
Eco53kI GAGCTC 2 cut(s) 478, 618
Eco72I CACGTG 1 cut(s) 1208
Eco91I GGTNACC 1 cut(s) 769
EcoICRI GAGCTC 2 cut(s) 478, 618
EcoO109I RGGNCCY 1 cut(s) 238
EcoO65I GGTNACC 1 cut(s) 769
EcoRII CCWGG 2 cut(s) 484, 682
EcoT22I ATGCAT 1 cut(s) 1363
EcoT38I GRGCYC 2 cut(s) 480, 620
FaeI CATG 8 cut(s) 860, 908, 940, 1165, 1365, 1425, 1457, 1540
FalI AAGNNNNNCTT 2 cut(s) 1525, 1557
FaqI GGGAC 3 cut(s) 251, 1204, 1216
FatI CATG 8 cut(s) 856, 904, 936, 1161, 1361, 1421, 1453, 1536
FauI CCCGC 1 cut(s) 751
FbaI TGATCA 1 cut(s) 1587
FblI GTMKAC 1 cut(s) 1492
Fnu4HI GCNGC 5 cut(s) 9, 605, 718, 989, 1485
FokI GGATG 8 cut(s) 287, 315, 533, 599, 931, 1132, 1274, 1436
FriOI GRGCYC 2 cut(s) 480, 620
Fsp4HI GCNGC 5 cut(s) 9, 605, 718, 989, 1485
FspBI CTAG 6 cut(s) 497, 978, 992, 1391, 1488, 1547
GlaI GCGC 1 cut(s) 1339
GluI GCNGC 5 cut(s) 9, 605, 718, 989, 1485
HaeIII GGCC 2 cut(s) 717, 956
HapII CCGG 2 cut(s) 665, 774
HgaI GACGC 1 cut(s) 260
HhaI GCGC 1 cut(s) 1340
Hin1II CATG 8 cut(s) 860, 908, 940, 1165, 1365, 1425, 1457, 1540
Hin6I GCGC 1 cut(s) 1338
HinP1I GCGC 1 cut(s) 1338
HincII GTYRAC 3 cut(s) 703, 1354, 1493
HindII GTYRAC 3 cut(s) 703, 1354, 1493
HindIII AAGCTT 2 cut(s) 244, 949
HinfI GANTC 6 cut(s) 39, 292, 545, 971, 1123, 1418
HpaII CCGG 2 cut(s) 665, 774
HphI GGTGA 3 cut(s) 575, 781, 920
Hpy166II GTNNAC 6 cut(s) 494, 703, 744, 1045, 1354, 1493
Hpy188III TCNNGA 4 cut(s) 43, 813, 1062, 1162
Hpy8I GTNNAC 6 cut(s) 494, 703, 744, 1045, 1354, 1493
Hpy99I CGWCG 1 cut(s) 254
HpyAV CCTTC 7 cut(s) 175, 228, 491, 1016, 1084, 1351, 1373
HpyCH4III ACNGT 3 cut(s) 707, 732, 1624
HpyCH4IV ACGT 3 cut(s) 808, 1006, 1207
HpyCH4V TGCA 9 cut(s) 406, 607, 900, 1051, 1361, 1385, 1449, 1484, 1607
HpyF10VI GCNNNNNNNGC 1 cut(s) 1604
HpyF3I CTNAG 5 cut(s) 213, 747, 1224, 1298, 1348
HpySE526I ACGT 3 cut(s) 808, 1006, 1207
Hsp92II CATG 8 cut(s) 860, 908, 940, 1165, 1365, 1425, 1457, 1540
HspAI GCGC 1 cut(s) 1338
KflI GGGWCCC 1 cut(s) 238
Ksp22I TGATCA 1 cut(s) 1587
Kzo9I GATC 5 cut(s) 626, 1333, 1402, 1587, 1613
LguI GCTCTTC 1 cut(s) 893
LmnI GCTCC 2 cut(s) 16, 483
Lsp1109I GCAGC 3 cut(s) 591, 1000, 1496
LweI GCATC 4 cut(s) 511, 556, 971, 1458
MaeI CTAG 6 cut(s) 497, 978, 992, 1391, 1488, 1547
MaeII ACGT 3 cut(s) 808, 1006, 1207
MaeIII GTNAC 3 cut(s) 502, 726, 769
MalI GATC 5 cut(s) 628, 1335, 1404, 1589, 1615
MbiI CCGCTC 1 cut(s) 11
MboI GATC 5 cut(s) 626, 1333, 1402, 1587, 1613
MboII GAAGA 7 cut(s) 58, 61, 646, 805, 880, 923, 1204
MfeI CAATTG 2 cut(s) 721, 1436
MflI RGATCY 1 cut(s) 1402
MhlI GDGCHC 2 cut(s) 480, 620
MlyI GAGTC 2 cut(s) 48, 286
MmeI TCCRAC 3 cut(s) 418, 889, 1430
Mph1103I ATGCAT 1 cut(s) 1363
MroXI GAANNNNTTC 1 cut(s) 1246
MseI TTAA 5 cut(s) 834, 882, 1283, 1397, 1669
MslI CAYNNNNRTG 4 cut(s) 266, 513, 733, 1329
MspI CCGG 2 cut(s) 665, 774
MspR9I CCNGG 3 cut(s) 486, 666, 684
MunI CAATTG 2 cut(s) 721, 1436
Mva1269I GAATGC 2 cut(s) 900, 1565
MvaI CCWGG 2 cut(s) 486, 684
MvnI CGCG 1 cut(s) 1338
MwoI GCNNNNNNNGC 1 cut(s) 1604
NciI CCSGG 1 cut(s) 666
NdeII GATC 5 cut(s) 626, 1333, 1402, 1587, 1613
NlaIII CATG 8 cut(s) 860, 908, 940, 1165, 1365, 1425, 1457, 1540
NlaIV GGNNCC 3 cut(s) 239, 240, 1404
NmuCI GTSAC 2 cut(s) 726, 769
NsiI ATGCAT 1 cut(s) 1363
NspI RCATGY 1 cut(s) 1540
OliI CACNNNNGTG 2 cut(s) 266, 733
PagI TCATGA 1 cut(s) 1161
PciSI GCTCTTC 1 cut(s) 893
PctI GAATGC 2 cut(s) 900, 1565
PdmI GAANNNNTTC 1 cut(s) 1246
PfeI GAWTC 4 cut(s) 545, 971, 1123, 1418
PfoI TCCNGGA 1 cut(s) 664
PkrI GCNGC 5 cut(s) 10, 606, 719, 990, 1486
PleI GAGTC 2 cut(s) 47, 286
PmaCI CACGTG 1 cut(s) 1208
PmlI CACGTG 1 cut(s) 1208
PpsI GAGTC 2 cut(s) 47, 286
Ppu21I YACGTR 1 cut(s) 1208
PpuMI RGGWCCY 1 cut(s) 238
PshBI ATTAAT 1 cut(s) 1397
Psp124BI GAGCTC 2 cut(s) 480, 620
Psp1406I AACGTT 2 cut(s) 808, 1006
Psp5II RGGWCCY 1 cut(s) 238
Psp6I CCWGG 2 cut(s) 484, 682
PspCI CACGTG 1 cut(s) 1208
PspEI GGTNACC 1 cut(s) 769
PspGI CCWGG 2 cut(s) 484, 682
PspN4I GGNNCC 3 cut(s) 239, 240, 1404
PspPI GGNCC 2 cut(s) 238, 955
PspPPI RGGWCCY 1 cut(s) 238
PsuI RGATCY 1 cut(s) 1402
RsaI GTAC 2 cut(s) 935, 1573
RsaNI GTAC 2 cut(s) 934, 1572
RseI CAYNNNNRTG 4 cut(s) 266, 513, 733, 1329
SacI GAGCTC 2 cut(s) 480, 620
SalI GTCGAC 1 cut(s) 1491
SapI GCTCTTC 1 cut(s) 893
SaqAI TTAA 5 cut(s) 834, 882, 1283, 1397, 1669
SatI GCNGC 5 cut(s) 9, 605, 718, 989, 1485
Sau3AI GATC 5 cut(s) 626, 1333, 1402, 1587, 1613
Sau96I GGNCC 2 cut(s) 238, 955
SchI GAGTC 2 cut(s) 48, 286
ScrFI CCNGG 3 cut(s) 486, 666, 684
SduI GDGCHC 2 cut(s) 480, 620
SfaNI GCATC 4 cut(s) 511, 556, 971, 1458
SfcI CTRYAG 1 cut(s) 1267
SinI GGWCC 1 cut(s) 238
SmiMI CAYNNNNRTG 4 cut(s) 266, 513, 733, 1329
SmlI CTYRAG 1 cut(s) 1032
SmoI CTYRAG 1 cut(s) 1032
SpeI ACTAGT 2 cut(s) 496, 1546
SsiI CCGC 5 cut(s) 9, 73, 718, 758, 1611
SspI AATATT 1 cut(s) 1058
SspMI CTAG 6 cut(s) 497, 978, 992, 1391, 1488, 1547
SstI GAGCTC 2 cut(s) 480, 620
StyD4I CCNGG 3 cut(s) 484, 664, 682
TaaI ACNGT 3 cut(s) 707, 732, 1624
TaiI ACGT 3 cut(s) 811, 1009, 1210
TaqI TCGA 4 cut(s) 37, 249, 426, 1492
TatI WGTACW 2 cut(s) 933, 1571
TauI GCSGC 2 cut(s) 11, 720
TfiI GAWTC 4 cut(s) 545, 971, 1123, 1418
Tru1I TTAA 5 cut(s) 834, 882, 1283, 1397, 1669
Tru9I TTAA 5 cut(s) 834, 882, 1283, 1397, 1669
TscAI CASTG 4 cut(s) 217, 565, 735, 795
TseFI GTSAC 2 cut(s) 726, 769
TseI GCWGC 3 cut(s) 604, 988, 1484
Tsp45I GTSAC 2 cut(s) 726, 769
TspRI CASTG 4 cut(s) 217, 565, 735, 795
VpaK11BI GGWCC 1 cut(s) 238
VspI ATTAAT 1 cut(s) 1397
XapI RAATTY 6 cut(s) 226, 363, 429, 595, 1131, 1243
XceI RCATGY 1 cut(s) 1540
XmiI GTMKAC 1 cut(s) 1492
XmnI GAANNNNTTC 1 cut(s) 1246
XspI CTAG 6 cut(s) 497, 978, 992, 1391, 1488, 1547
Zsp2I ATGCAT 1 cut(s) 1363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.