RchiOBHm_Chr5g0025261

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
19194850 .. 19195356
507 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30494

Sequence Viewer

Length: 351 bp
ATGTGTATAGTTTTGGAGTGTTGGTGCTTGAAATCATTAGTGGCATGGGAGTTATGGAATGAAGGTGCGGAGTTAGCATTCAAGGATCCAACACTAGGTGATTCATATCATGAGGATCAATTGTTGAGATGCATTCATGTTGGTCTACTATGCGTGGAGGAGAATGGAGCCGATCGGCCTACTATGTTAGAAGTCATTTCCATGTTGACAAGTGAAGGCATGTCACTACCTACGCCTACAAAGCCAGCATTCTGTAGGGAGAGAAGAGTGGTCAGAACTGGTACGGTTGGAAAAGCTTCAGAAAATGCATCGATAAATACAATGTCCAATTCTGATTATGATGCGCGTTAA

Protein Analysis

116

Amino Acids

12.92

Weight (kDa)

4.83

Isoelectric Point (pI)

40.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 145
AccII CGCG 1 cut(s) 346
AciI CCGC 1 cut(s) 68
AclWI GGATC 3 cut(s) 80, 93, 123
AcuI CTGAAG 1 cut(s) 282
AdeI CACNNNGTG 1 cut(s) 98
AfaI GTAC 1 cut(s) 283
AfiI CCNNNNNNNGG 1 cut(s) 95
AgsI TTSAA 2 cut(s) 31, 82
AluBI AGCT 1 cut(s) 296
AluI AGCT 1 cut(s) 296
AlwI GGATC 3 cut(s) 80, 93, 123
AoxI GGCC 1 cut(s) 176
Asp700I GAANNNNTTC 1 cut(s) 295
AspLEI GCGC 1 cut(s) 346
AsuHPI GGTGA 1 cut(s) 110
BamHI GGATCC 1 cut(s) 85
BfaI CTAG 1 cut(s) 95
BfmI CTRYAG 1 cut(s) 253
BmiI GGNNCC 2 cut(s) 87, 169
BmsI GCATC 3 cut(s) 119, 317, 331
Bsa29I ATCGAT 1 cut(s) 311
BsaBI GATNNNNATC 1 cut(s) 105
BsaXI ACNNNNNCTCC 2 cut(s) 8, 38
Bsc4I CCNNNNNNNGG 1 cut(s) 95
Bse1I ACTGG 1 cut(s) 283
Bse8I GATNNNNATC 1 cut(s) 105
BseCI ATCGAT 1 cut(s) 311
BseJI GATNNNNATC 1 cut(s) 105
BseLI CCNNNNNNNGG 1 cut(s) 95
BseNI ACTGG 1 cut(s) 283
BseRI GAGGAG 1 cut(s) 173
Bsh1236I CGCG 1 cut(s) 346
Bsh1285I CGRYCG 1 cut(s) 175
BshFI GGCC 1 cut(s) 178
BshVI ATCGAT 1 cut(s) 311
BsiEI CGRYCG 1 cut(s) 175
BslI CCNNNNNNNGG 1 cut(s) 95
BsmI GAATGC 3 cut(s) 77, 132, 248
BsnI GGCC 1 cut(s) 178
Bsp143I GATC 3 cut(s) 85, 115, 172
BspACI CCGC 1 cut(s) 68
BspANI GGCC 1 cut(s) 178
BspDI ATCGAT 1 cut(s) 311
BspFNI CGCG 1 cut(s) 346
BspHI TCATGA 1 cut(s) 109
BspLI GGNNCC 2 cut(s) 87, 169
BspPI GGATC 3 cut(s) 80, 93, 123
BsrI ACTGG 1 cut(s) 283
BssMI GATC 3 cut(s) 85, 115, 172
Bst4CI ACNGT 1 cut(s) 286
Bst6I CTCTTC 1 cut(s) 259
BstC8I GCNNGC 1 cut(s) 246
BstFNI CGCG 1 cut(s) 346
BstHHI GCGC 1 cut(s) 346
BstKTI GATC 3 cut(s) 88, 118, 175
BstMBI GATC 3 cut(s) 85, 115, 172
BstMCI CGRYCG 1 cut(s) 175
BstMWI GCNNNNNNNGC 2 cut(s) 74, 241
BstNSI RCATGY 1 cut(s) 223
BstSFI CTRYAG 1 cut(s) 253
BstUI CGCG 1 cut(s) 346
BstX2I RGATCY 1 cut(s) 85
BstYI RGATCY 1 cut(s) 85
Bsu15I ATCGAT 1 cut(s) 311
BsuRI GGCC 1 cut(s) 178
BsuTUI ATCGAT 1 cut(s) 311
Cac8I GCNNGC 1 cut(s) 246
CciI TCATGA 1 cut(s) 109
CfoI GCGC 1 cut(s) 346
ClaI ATCGAT 1 cut(s) 311
Csp6I GTAC 1 cut(s) 282
CviAII CATG 5 cut(s) 45, 110, 137, 202, 220
CviJI RGCY 4 cut(s) 170, 178, 244, 296
CviKI_1 RGCY 4 cut(s) 170, 178, 244, 296
CviQI GTAC 1 cut(s) 282
DpnI GATC 3 cut(s) 87, 117, 174
DpnII GATC 3 cut(s) 85, 115, 172
DraIII CACNNNGTG 1 cut(s) 98
Eam1104I CTCTTC 1 cut(s) 259
EarI CTCTTC 1 cut(s) 259
Eco57I CTGAAG 1 cut(s) 282
EcoT22I ATGCAT 2 cut(s) 134, 310
FaeI CATG 5 cut(s) 48, 113, 140, 205, 223
FatI CATG 5 cut(s) 44, 109, 136, 201, 219
FblI GTMKAC 1 cut(s) 145
FspBI CTAG 1 cut(s) 95
GlaI GCGC 1 cut(s) 345
HaeIII GGCC 1 cut(s) 178
HhaI GCGC 1 cut(s) 346
Hin1II CATG 5 cut(s) 48, 113, 140, 205, 223
Hin6I GCGC 1 cut(s) 344
HinP1I GCGC 1 cut(s) 344
HincII GTYRAC 1 cut(s) 207
HindII GTYRAC 1 cut(s) 207
HindIII AAGCTT 1 cut(s) 294
HinfI GANTC 1 cut(s) 101
HphI GGTGA 1 cut(s) 110
Hpy166II GTNNAC 2 cut(s) 146, 207
Hpy188I TCNGA 3 cut(s) 275, 301, 334
Hpy188III TCNNGA 1 cut(s) 110
Hpy8I GTNNAC 2 cut(s) 146, 207
HpyAV CCTTC 2 cut(s) 56, 209
HpyCH4III ACNGT 1 cut(s) 286
HpyCH4V TGCA 2 cut(s) 132, 308
HpyF10VI GCNNNNNNNGC 2 cut(s) 74, 241
Hsp92II CATG 5 cut(s) 48, 113, 140, 205, 223
HspAI GCGC 1 cut(s) 344
Kzo9I GATC 3 cut(s) 85, 115, 172
LmnI GCTCC 1 cut(s) 167
LpnPI CCDG 2 cut(s) 258, 264
LweI GCATC 3 cut(s) 119, 317, 331
MaeI CTAG 1 cut(s) 95
MaeIII GTNAC 1 cut(s) 222
MalI GATC 3 cut(s) 87, 117, 174
MboI GATC 3 cut(s) 85, 115, 172
MboII GAAGA 1 cut(s) 276
MfeI CAATTG 1 cut(s) 119
MflI RGATCY 1 cut(s) 85
MluCI AATT 2 cut(s) 119, 328
MmeI TCCRAC 2 cut(s) 113, 268
MnlI CCTC 2 cut(s) 106, 151
Mph1103I ATGCAT 2 cut(s) 134, 310
MroXI GAANNNNTTC 1 cut(s) 295
MseI TTAA 1 cut(s) 349
MslI CAYNNNNRTG 1 cut(s) 200
MunI CAATTG 1 cut(s) 119
Mva1269I GAATGC 3 cut(s) 77, 132, 248
MvnI CGCG 1 cut(s) 346
MwoI GCNNNNNNNGC 2 cut(s) 74, 241
NdeII GATC 3 cut(s) 85, 115, 172
NlaIII CATG 5 cut(s) 48, 113, 140, 205, 223
NlaIV GGNNCC 2 cut(s) 87, 169
NmuCI GTSAC 1 cut(s) 222
NsiI ATGCAT 2 cut(s) 134, 310
NspI RCATGY 1 cut(s) 223
PagI TCATGA 1 cut(s) 109
PctI GAATGC 3 cut(s) 77, 132, 248
PdmI GAANNNNTTC 1 cut(s) 295
PfeI GAWTC 1 cut(s) 101
Ple19I CGATCG 1 cut(s) 175
PspN4I GGNNCC 2 cut(s) 87, 169
PsuI RGATCY 1 cut(s) 85
PvuI CGATCG 1 cut(s) 175
RsaI GTAC 1 cut(s) 283
RsaNI GTAC 1 cut(s) 282
RseI CAYNNNNRTG 1 cut(s) 200
SaqAI TTAA 1 cut(s) 349
Sau3AI GATC 3 cut(s) 85, 115, 172
SetI ASST 4 cut(s) 67, 100, 232, 298
SfaNI GCATC 3 cut(s) 119, 317, 331
SfcI CTRYAG 1 cut(s) 253
SmiMI CAYNNNNRTG 1 cut(s) 200
Sse9I AATT 2 cut(s) 119, 328
SsiI CCGC 1 cut(s) 68
SspMI CTAG 1 cut(s) 95
TaaI ACNGT 1 cut(s) 286
TaqI TCGA 1 cut(s) 311
TasI AATT 2 cut(s) 119, 328
TfiI GAWTC 1 cut(s) 101
Tru1I TTAA 1 cut(s) 349
Tru9I TTAA 1 cut(s) 349
TseFI GTSAC 1 cut(s) 222
Tsp45I GTSAC 1 cut(s) 222
TspDTI ATGAA 3 cut(s) 75, 93, 125
XceI RCATGY 1 cut(s) 223
XmiI GTMKAC 1 cut(s) 145
XmnI GAANNNNTTC 1 cut(s) 295
XspI CTAG 1 cut(s) 95
Zsp2I ATGCAT 2 cut(s) 134, 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.