RLG00000032824

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
19465308 .. 19466107
800 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032824

Sequence Viewer

Length: 516 bp
ATGAGAGTAATTCATAGAGATTTGAAAGCAAGTAATGTTCTGCTTGATGAAAGTATGAATCCCAAAATTTCCGACTTTGGAATGGCAAGGATTTTCATGAATGATGAACAAGAAGCAAATACTATGAAGATTGTTGGGACACGTGGTTATATGAGAAACAATAGCTTCCACAATGATGATCGCACCTTCAACTTAGTTGGCTATGCATGGGCGTTATGGAAAGAAGATGCAGGACTAGGACTAATGGATCCGACACTTGGCGATTCATGTGATGAACATCAATGGTTGAGGTGCATCCATGTTGGTCTGCTTTGTGTGGAGGAAAATGCAGCTAGTCGACCCACGATGTTAGATGTGATATCTATGCTGACCAATGAAAGCATGTCTTTACCAGTTCCTACAAAACCAGCATTCTGTACAGAAAGAAATGTGATCATAGATGCTATAGGTGGAAACGGATCGAAAATGGTTTCATCTATAAATACTATCTCCAAATCTGATTTTGATGGGCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

172

Amino Acids

19.09

Weight (kDa)

5.15

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 2 - 52 7.5e-13 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 2 - 42 4.3e-09 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 337
AclWI GGATC 3 cut(s) 242, 255, 466
AcsI RAATTY 1 cut(s) 66
AcvI CACGTG 1 cut(s) 143
AfaI GTAC 1 cut(s) 418
AfiI CCNNNNNNNGG 1 cut(s) 257
AflIII ACRYGT 1 cut(s) 140
AgsI TTSAA 2 cut(s) 25, 190
AluBI AGCT 2 cut(s) 165, 332
AluI AGCT 2 cut(s) 165, 332
AlwI GGATC 3 cut(s) 242, 255, 466
ApeKI GCWGC 1 cut(s) 329
ApoI RAATTY 1 cut(s) 66
BamHI GGATCC 1 cut(s) 247
BbrPI CACGTG 1 cut(s) 143
BbvI GCAGC 1 cut(s) 341
BccI CCATC 1 cut(s) 500
BclI TGATCA 1 cut(s) 432
BfaI CTAG 2 cut(s) 236, 333
BfmI CTRYAG 1 cut(s) 444
BisI GCNGC 1 cut(s) 330
BlsI GCNGC 1 cut(s) 331
BmiI GGNNCC 1 cut(s) 249
BmsI GCATC 3 cut(s) 217, 303, 430
BsaAI YACGTR 1 cut(s) 143
BsaBI GATNNNNATC 1 cut(s) 276
Bsc4I CCNNNNNNNGG 1 cut(s) 257
Bse1I ACTGG 1 cut(s) 392
Bse8I GATNNNNATC 1 cut(s) 276
BseGI GGATG 1 cut(s) 294
BseJI GATNNNNATC 1 cut(s) 276
BseLI CCNNNNNNNGG 1 cut(s) 257
BseNI ACTGG 1 cut(s) 392
BseXI GCAGC 1 cut(s) 341
BslFI GGGAC 1 cut(s) 151
BslI CCNNNNNNNGG 1 cut(s) 257
BsmFI GGGAC 1 cut(s) 151
BsmI GAATGC 1 cut(s) 410
Bsp1407I TGTACA 1 cut(s) 416
Bsp143I GATC 4 cut(s) 178, 247, 432, 458
BspHI TCATGA 1 cut(s) 96
BspLI GGNNCC 1 cut(s) 249
BspPI GGATC 3 cut(s) 242, 255, 466
BsrGI TGTACA 1 cut(s) 416
BsrI ACTGG 1 cut(s) 392
BssMI GATC 4 cut(s) 178, 247, 432, 458
BstAUI TGTACA 1 cut(s) 416
BstBAI YACGTR 1 cut(s) 143
BstDEI CTNAG 1 cut(s) 193
BstF5I GGATG 1 cut(s) 294
BstKTI GATC 4 cut(s) 181, 250, 435, 461
BstMBI GATC 4 cut(s) 178, 247, 432, 458
BstNSI RCATGY 1 cut(s) 385
BstSFI CTRYAG 1 cut(s) 444
BstV1I GCAGC 1 cut(s) 341
BstX2I RGATCY 1 cut(s) 247
BstYI RGATCY 1 cut(s) 247
BtsCI GGATG 1 cut(s) 294
CciI TCATGA 1 cut(s) 96
Csp6I GTAC 1 cut(s) 417
CviAII CATG 5 cut(s) 97, 207, 267, 299, 382
CviJI RGCY 3 cut(s) 165, 201, 332
CviKI_1 RGCY 3 cut(s) 165, 201, 332
CviQI GTAC 1 cut(s) 417
DdeI CTNAG 1 cut(s) 193
DpnI GATC 4 cut(s) 180, 249, 434, 460
DpnII GATC 4 cut(s) 178, 247, 432, 458
Eco32I GATATC 1 cut(s) 360
Eco72I CACGTG 1 cut(s) 143
EcoRV GATATC 1 cut(s) 360
EcoT22I ATGCAT 1 cut(s) 208
FaeI CATG 5 cut(s) 100, 210, 270, 302, 385
FalI AAGNNNNNCTT 2 cut(s) 370, 402
FaqI GGGAC 1 cut(s) 151
FatI CATG 5 cut(s) 96, 206, 266, 298, 381
FbaI TGATCA 1 cut(s) 432
FblI GTMKAC 1 cut(s) 337
Fnu4HI GCNGC 1 cut(s) 330
FokI GGATG 1 cut(s) 281
Fsp4HI GCNGC 1 cut(s) 330
FspBI CTAG 2 cut(s) 236, 333
GluI GCNGC 1 cut(s) 330
Hin1II CATG 5 cut(s) 100, 210, 270, 302, 385
HincII GTYRAC 1 cut(s) 338
HindII GTYRAC 1 cut(s) 338
HinfI GANTC 2 cut(s) 58, 263
Hpy166II GTNNAC 1 cut(s) 338
Hpy188I TCNGA 3 cut(s) 73, 252, 499
Hpy188III TCNNGA 1 cut(s) 97
Hpy8I GTNNAC 1 cut(s) 338
HpyAV CCTTC 1 cut(s) 196
HpyCH4IV ACGT 1 cut(s) 142
HpyCH4V TGCA 4 cut(s) 206, 230, 294, 329
HpyF3I CTNAG 1 cut(s) 193
HpySE526I ACGT 1 cut(s) 142
Hsp92II CATG 5 cut(s) 100, 210, 270, 302, 385
Ksp22I TGATCA 1 cut(s) 432
Kzo9I GATC 4 cut(s) 178, 247, 432, 458
LpnPI CCDG 3 cut(s) 216, 405, 420
Lsp1109I GCAGC 1 cut(s) 341
LweI GCATC 3 cut(s) 217, 303, 430
MaeI CTAG 2 cut(s) 236, 333
MaeII ACGT 1 cut(s) 142
MalI GATC 4 cut(s) 180, 249, 434, 460
MboI GATC 4 cut(s) 178, 247, 432, 458
MboII GAAGA 2 cut(s) 139, 236
MflI RGATCY 1 cut(s) 247
MluCI AATT 2 cut(s) 9, 66
MmeI TCCRAC 2 cut(s) 96, 275
MnlI CCTC 2 cut(s) 282, 313
Mph1103I ATGCAT 1 cut(s) 208
MseI TTAA 1 cut(s) 514
MslI CAYNNNNRTG 1 cut(s) 174
Mva1269I GAATGC 1 cut(s) 410
NdeII GATC 4 cut(s) 178, 247, 432, 458
NlaIII CATG 5 cut(s) 100, 210, 270, 302, 385
NlaIV GGNNCC 1 cut(s) 249
NsiI ATGCAT 1 cut(s) 208
NspI RCATGY 1 cut(s) 385
PagI TCATGA 1 cut(s) 96
PctI GAATGC 1 cut(s) 410
PfeI GAWTC 2 cut(s) 58, 263
PkrI GCNGC 1 cut(s) 331
PmaCI CACGTG 1 cut(s) 143
PmlI CACGTG 1 cut(s) 143
Ppu21I YACGTR 1 cut(s) 143
PspCI CACGTG 1 cut(s) 143
PspN4I GGNNCC 1 cut(s) 249
PsuI RGATCY 1 cut(s) 247
RsaI GTAC 1 cut(s) 418
RsaNI GTAC 1 cut(s) 417
RseI CAYNNNNRTG 1 cut(s) 174
SalI GTCGAC 1 cut(s) 336
SaqAI TTAA 1 cut(s) 514
SatI GCNGC 1 cut(s) 330
Sau3AI GATC 4 cut(s) 178, 247, 432, 458
SetI ASST 6 cut(s) 145, 167, 188, 293, 334, 451
SfaNI GCATC 3 cut(s) 217, 303, 430
SfcI CTRYAG 1 cut(s) 444
SmiMI CAYNNNNRTG 1 cut(s) 174
Sse9I AATT 2 cut(s) 9, 66
SspMI CTAG 2 cut(s) 236, 333
TaiI ACGT 1 cut(s) 145
TaqI TCGA 2 cut(s) 337, 461
TasI AATT 2 cut(s) 9, 66
TatI WGTACW 1 cut(s) 416
TfiI GAWTC 2 cut(s) 58, 263
Tru1I TTAA 1 cut(s) 514
Tru9I TTAA 1 cut(s) 514
TseI GCWGC 1 cut(s) 329
TspGWI ACGGA 1 cut(s) 471
XapI RAATTY 1 cut(s) 66
XceI RCATGY 1 cut(s) 385
XmiI GTMKAC 1 cut(s) 337
XspI CTAG 2 cut(s) 236, 333
Zsp2I ATGCAT 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.