Rroxscaffold_1G00053880

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
75106404 .. 75109967
3564 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00053880.1

Sequence Viewer

Length: 2187 bp
ATGTCGAAATCCAGCTATCTAGCAATCTCCCACACCAATACTGGAAATTCTATAAATTATGCATGGATTGCCAACCGAAAAACACCTATTCTATACCCAACAGGAGTTCTTACCTTGGATAAGAACAACACCTTGAAAATTACCCAAAGTGGTGGTGATCCTCTGCTTATTTACTCTGCTTCAGGAAGTACTACCAATAATTCCAATATTGTTGCTACCCTTTTGGATTCTGGCAATTTCATTCTACAACAAGTGAACTCCGACGGATCAATGAAGAGGGTTTTGTGGCAAAGTTTTGATCATCCCGGAGACACCCTATTGCCAGGTATGAAGTTAGGTGTTGATTATAAAAATGGTCACATTTGGTCACTTTCATCGTGGACTGGTCTGTACAGTGTAGAACCGGGGGCTTTCACTCTCGATTGGGACCCCGGTGAGCACCAGTTGAAGATCAAGGAACGAGGGAAGGTTTGTTGGAGTAGTGGTGTCTTTAGCAATGGAAGATTCAAGTTTGTATTACCTGATGATGATTCCAAGAAGTTGAGGTACAATTTTAGCATTGTTTCGAATGAGAATGAAGACTACTTTACTTATACTTATGTTGGTGATCAAAGTGATGCATCACAATGGGTGCTGAACGCCATGGGGCGACTACATGACTTCGATGAAAATGTTGATATTGCGCGAGCAGATTACTGTTACGGCTATAACAGTGATGGAGGGTGCGCGAGATGGGAGCAACCAAGTTGCAGACATGTGGGTGATAAATTTGTGCTAAAAATTGGTTACTTTCGAGAAATGACCAGCTCTAATTCAATATATACGAGTGATTCAAATACGACTCTGGGATATAGTGATTGTATGACTACTTGTTGGAACACTTGTGGCTGCCTTGGATTCAACTTTCTGCTTAATAATCTGACTGGATGCCAGTACTGGAGTGGAAACTGGGAGTTCATCGAAGAGATCACTGATGATGATTCACGGGTTTTTGTATATACAACAAAGTCGACTCCCAATATCAAAGTACATGAGTGGAGATGGATTGGCACTGGAATTGCGTTTGCTGTACTGGTAATGATGTTTTGCATTATCTGTTATCTACTGAAAAGAAGAAAATTTTTAATTTCAGCTGAGAACAGGAGAAAGATTCAGAATGAGTTGCTGAACCTAATGAAATCTAATAGACCTACTGATGTGAACGGAGTTCAAAATGATGGAAAGATGGAACAACAAGATTTAAGTGTATTTAGCTATGCGTCTTTAATGACTGCCACATGCAACTTCTCTGAGGAAAACAAGCTCGGACAAGGGGGCTTTGGTCCTGTTTATAAGGGAAAATTGGTGACAGGACAAGAAATAGCTGTGAAGAGGCTTTCAGAACGTTCACAACAGGGAACAGTGGAGTTTAAAAATGAACTGAGACTCATATATGAACTCCAACATACAAATCTTGCTCAACTTTTTGGATTTTGCATTCATGGAGATGAGAGGATGTTAATATATGAGTACATGCCAAACAGAAGTTTGGATTACTATTTATTTGATTCAACCAGAGCTCTGTTTCTAGATTGGACGACTCGTTTCAGTATAATCGAAGGAATCGCTCAAGGATTGCTTTACTTGCACAAGTACTCAAGAATGCAAGTAATTCATAGAGATTTGAAACCTAGTAACATTCTACTTGATGAAAATATGAATCCCAAGATTTCTGATTTTGGTATGGCAAGGATCTTCACCCATAATGAACGGGAAGCAAATACTAAGACTAAGAGGATTGTTGGGACATATTTTGGAGTGTTGGTGCTTGAAATCATTAGTGGTAGGAGAAACACGAGCTTCTACGATGACGAACGCGTGGTCAATACAGTAGGATATGCATGGGAGTTATGGAATGAAGGTGCAGAGTTAGCATTCAAGGATCCAACACTAGGTGATTCATTTCATGAGGATCAATTTTTGAGATGCATTCATGTTGGTCTACTATGCGTGGAGGAGAATGGAGCGGATCGGCCTACTATGTTAGAAGTCATTTCCATGTTAACAAGTGAAAACATGTCAGTACCTAAACCTACAAAGCCTGCATTCTGTAGGGAGAGAAGAGGGGTCAGAACTGGTACGGTTGGAAAAGTTTCAGAAAATGTATCGATAAATACAATGTCCAATTCTGATTATGATGTGCGTTGA

Protein Analysis

728

Amino Acids

82.82

Weight (kDa)

5.94

Isoelectric Point (pI)

33.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 21 - 127 3.8e-27 D-mannose binding lectin
Pkinase PF00069 430 - 596 2.7e-33 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 432 - 592 3.9e-33 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 348, 1332
AccBSI CCGCTC 1 cut(s) 2006
AccI GTMKAC 2 cut(s) 1010, 1981
AccII CGCG 3 cut(s) 685, 728, 1857
AciI CCGC 1 cut(s) 2006
AclI AACGTT 1 cut(s) 1384
AclWI GGATC 7 cut(s) 152, 274, 1739, 1916, 1929, 1959, 2016
AcsI RAATTY 3 cut(s) 46, 767, 1118
AcuI CTGAAG 1 cut(s) 165
AdeI CACNNNGTG 1 cut(s) 1934
AfiI CCNNNNNNNGG 1 cut(s) 1931
AflIII ACRYGT 3 cut(s) 754, 1855, 2055
AjnI CCWGG 1 cut(s) 322
AluBI AGCT 8 cut(s) 15, 807, 1133, 1254, 1303, 1364, 1559, 1839
AluI AGCT 8 cut(s) 15, 807, 1133, 1254, 1303, 1364, 1559, 1839
Alw21I GWGCWC 2 cut(s) 441, 1561
Alw26I GTCTC 2 cut(s) 303, 1417
AlwI GGATC 7 cut(s) 152, 274, 1739, 1916, 1929, 1959, 2016
AoxI GGCC 1 cut(s) 2012
ApeKI GCWGC 1 cut(s) 888
ApoI RAATTY 3 cut(s) 46, 767, 1118
ArsI GACNNNNNNTTYG 2 cut(s) 1845, 1877
Asp700I GAANNNNTTC 1 cut(s) 2131
AspLEI GCGC 2 cut(s) 685, 728
AspS9I GGNCC 2 cut(s) 427, 1322
AsuC2I CCSGG 3 cut(s) 306, 405, 432
AsuHPI GGTGA 7 cut(s) 167, 446, 617, 773, 1357, 1729, 1946
AsuII TTCGAA 1 cut(s) 566
AvaII GGWCC 2 cut(s) 427, 1322
BamHI GGATCC 1 cut(s) 1921
BanII GRGCYC 1 cut(s) 1561
BarI GAAGNNNNNNTAC 2 cut(s) 530, 562
BauI CACGAG 1 cut(s) 1834
BbsI GAAGAC 1 cut(s) 585
Bbv12I GWGCWC 2 cut(s) 441, 1561
BbvI GCAGC 1 cut(s) 875
BccI CCATC 5 cut(s) 710, 726, 1035, 1211, 1219
BceAI ACGGC 1 cut(s) 718
BciT130I CCWGG 1 cut(s) 324
BclI TGATCA 2 cut(s) 298, 607
BcnI CCSGG 3 cut(s) 306, 405, 432
BcoDI GTCTC 2 cut(s) 303, 1417
BfaI CTAG 4 cut(s) 20, 1568, 1671, 1931
BfmI CTRYAG 1 cut(s) 2089
BisI GCNGC 1 cut(s) 889
BlsI GCNGC 1 cut(s) 890
BmcAI AGTACT 3 cut(s) 190, 935, 1634
Bme1390I CCNGG 4 cut(s) 306, 324, 405, 432
Bme18I GGWCC 2 cut(s) 427, 1322
BmgT120I GGNCC 2 cut(s) 427, 1322
BmiI GGNNCC 3 cut(s) 428, 429, 1923
BmrFI CCNGG 4 cut(s) 306, 324, 405, 432
BmrI ACTGGG 1 cut(s) 958
BmsI GCATC 4 cut(s) 607, 629, 917, 1955
BmuI ACTGGG 1 cut(s) 958
BpiI GAAGAC 1 cut(s) 585
BpmI CTGGAG 1 cut(s) 958
Bpu14I TTCGAA 1 cut(s) 566
BpuEI CTTGAG 2 cut(s) 1593, 1621
BpuMI CCSGG 3 cut(s) 306, 405, 432
Bsa29I ATCGAT 1 cut(s) 2147
BsaJI CCNNGG 5 cut(s) 114, 404, 430, 642, 892
BsaXI ACNNNNNCTCC 4 cut(s) 469, 499, 1788, 1818
Bsc4I CCNNNNNNNGG 1 cut(s) 1931
Bse3DI GCAATG 1 cut(s) 502
BseBI CCWGG 1 cut(s) 324
BseCI ATCGAT 1 cut(s) 2147
BseDI CCNNGG 5 cut(s) 114, 404, 430, 642, 892
BseGI GGATG 3 cut(s) 301, 932, 1500
BseLI CCNNNNNNNGG 1 cut(s) 1931
BseMI GCAATG 1 cut(s) 502
BseMII CTCAG 3 cut(s) 1125, 1281, 1412
BseRI GAGGAG 1 cut(s) 2009
BseXI GCAGC 1 cut(s) 875
BsgI GTGCAG 1 cut(s) 1923
Bsh1236I CGCG 3 cut(s) 685, 728, 1857
BshFI GGCC 1 cut(s) 2014
BshVI ATCGAT 1 cut(s) 2147
BsiHKAI GWGCWC 2 cut(s) 441, 1561
BsiSI CCGG 3 cut(s) 306, 404, 432
BslFI GGGAC 2 cut(s) 440, 1798
BslI CCNNNNNNNGG 1 cut(s) 1931
BsmAI GTCTC 2 cut(s) 303, 1417
BsmFI GGGAC 2 cut(s) 440, 1798
BsmI GAATGC 5 cut(s) 1476, 1647, 1913, 1968, 2084
BsnI GGCC 1 cut(s) 2014
Bsp119I TTCGAA 1 cut(s) 566
Bsp1286I GDGCHC 2 cut(s) 441, 1561
Bsp1407I TGTACA 1 cut(s) 390
Bsp19I CCATGG 1 cut(s) 642
BspACI CCGC 1 cut(s) 2006
BspANI GGCC 1 cut(s) 2014
BspCNI CTCAG 3 cut(s) 1126, 1282, 1413
BspDI ATCGAT 1 cut(s) 2147
BspFNI CGCG 3 cut(s) 685, 728, 1857
BspHI TCATGA 1 cut(s) 1945
BspLI GGNNCC 3 cut(s) 428, 429, 1923
BspPI GGATC 7 cut(s) 152, 274, 1739, 1916, 1929, 1959, 2016
BspT104I TTCGAA 1 cut(s) 566
BsrBI CCGCTC 1 cut(s) 2006
BsrDI GCAATG 1 cut(s) 502
BsrGI TGTACA 1 cut(s) 390
BssECI CCNNGG 5 cut(s) 114, 404, 430, 642, 892
BssSI CACGAG 1 cut(s) 1834
BssT1I CCWWGG 3 cut(s) 114, 642, 892
Bst2BI CACGAG 1 cut(s) 1834
Bst2UI CCWGG 1 cut(s) 324
Bst4CI ACNGT 6 cut(s) 395, 698, 713, 1402, 1870, 2122
Bst6I CTCTTC 4 cut(s) 269, 957, 1364, 2095
BstAPI GCANNNNNTGC 1 cut(s) 68
BstAUI TGTACA 1 cut(s) 390
BstBI TTCGAA 1 cut(s) 566
BstC8I GCNNGC 2 cut(s) 687, 2082
BstDEI CTNAG 5 cut(s) 1134, 1290, 1421, 1764, 1770
BstDSI CCRYGG 1 cut(s) 642
BstF5I GGATG 3 cut(s) 301, 932, 1500
BstFNI CGCG 3 cut(s) 685, 728, 1857
BstHHI GCGC 2 cut(s) 685, 728
BstMAI GTCTC 2 cut(s) 303, 1417
BstMWI GCNNNNNNNGC 3 cut(s) 68, 1624, 1910
BstNI CCWGG 1 cut(s) 324
BstNSI RCATGY 4 cut(s) 758, 1281, 1516, 2059
BstSCI CCNGG 4 cut(s) 304, 322, 403, 430
BstSFI CTRYAG 1 cut(s) 2089
BstUI CGCG 3 cut(s) 685, 728, 1857
BstV1I GCAGC 1 cut(s) 875
BstV2I GAAGAC 1 cut(s) 585
BstX2I RGATCY 2 cut(s) 1731, 1921
BstXI CCANNNNNNTGG 1 cut(s) 152
BstYI RGATCY 2 cut(s) 1731, 1921
Bsu15I ATCGAT 1 cut(s) 2147
BsuRI GGCC 1 cut(s) 2014
BsuTUI ATCGAT 1 cut(s) 2147
BtgI CCRYGG 1 cut(s) 642
BtsCI GGATG 3 cut(s) 301, 932, 1500
BtsIMutI CAGTG 5 cut(s) 400, 718, 969, 1050, 1407
Cac8I GCNNGC 2 cut(s) 687, 2082
CciI TCATGA 1 cut(s) 1945
CfoI GCGC 2 cut(s) 685, 728
Cfr13I GGNCC 2 cut(s) 427, 1322
ClaI ATCGAT 1 cut(s) 2147
CseI GACGC 1 cut(s) 1248
DdeI CTNAG 5 cut(s) 1134, 1290, 1421, 1764, 1770
DraI TTTAAA 1 cut(s) 1411
DraIII CACNNNGTG 1 cut(s) 1934
Eam1104I CTCTTC 4 cut(s) 269, 957, 1364, 2095
EarI CTCTTC 4 cut(s) 269, 957, 1364, 2095
Ecl136II GAGCTC 1 cut(s) 1559
Eco130I CCWWGG 3 cut(s) 114, 642, 892
Eco24I GRGCYC 1 cut(s) 1561
Eco47I GGWCC 2 cut(s) 427, 1322
Eco53kI GAGCTC 1 cut(s) 1559
Eco57I CTGAAG 1 cut(s) 165
EcoICRI GAGCTC 1 cut(s) 1559
EcoO109I RGGNCCY 1 cut(s) 427
EcoRII CCWGG 1 cut(s) 322
EcoT14I CCWWGG 3 cut(s) 114, 642, 892
EcoT22I ATGCAT 4 cut(s) 64, 622, 1882, 1970
EcoT38I GRGCYC 1 cut(s) 1561
ErhI CCWWGG 3 cut(s) 114, 642, 892
FalI AAGNNNNNCTT 2 cut(s) 1602, 1634
FaqI GGGAC 2 cut(s) 440, 1798
FbaI TGATCA 2 cut(s) 298, 607
FblI GTMKAC 2 cut(s) 1010, 1981
Fnu4HI GCNGC 1 cut(s) 889
FokI GGATG 3 cut(s) 288, 939, 1507
FriOI GRGCYC 1 cut(s) 1561
Fsp4HI GCNGC 1 cut(s) 889
FspBI CTAG 4 cut(s) 20, 1568, 1671, 1931
GlaI GCGC 2 cut(s) 684, 727
GluI GCNGC 1 cut(s) 889
GsuI CTGGAG 1 cut(s) 958
HaeIII GGCC 1 cut(s) 2014
HapII CCGG 3 cut(s) 306, 404, 432
HgaI GACGC 1 cut(s) 1248
HhaI GCGC 2 cut(s) 685, 728
Hin6I GCGC 2 cut(s) 683, 726
HinP1I GCGC 2 cut(s) 683, 726
HincII GTYRAC 2 cut(s) 1011, 2043
HindII GTYRAC 2 cut(s) 1011, 2043
HpaI GTTAAC 1 cut(s) 2043
HpaII CCGG 3 cut(s) 306, 404, 432
HphI GGTGA 7 cut(s) 167, 446, 617, 773, 1357, 1729, 1946
Hpy166II GTNNAC 7 cut(s) 256, 381, 1011, 1201, 1388, 1982, 2043
Hpy188III TCNNGA 6 cut(s) 183, 419, 794, 1568, 1638, 1946
Hpy8I GTNNAC 7 cut(s) 256, 381, 1011, 1201, 1388, 1982, 2043
Hpy99I CGWCG 1 cut(s) 266
HpyAV CCTTC 3 cut(s) 460, 1592, 1892
HpyCH4III ACNGT 6 cut(s) 395, 698, 713, 1402, 1870, 2122
HpyCH4IV ACGT 1 cut(s) 1384
HpyF10VI GCNNNNNNNGC 3 cut(s) 68, 1624, 1910
HpyF3I CTNAG 5 cut(s) 1134, 1290, 1421, 1764, 1770
HpySE526I ACGT 1 cut(s) 1384
HspAI GCGC 2 cut(s) 683, 726
KflI GGGWCCC 1 cut(s) 427
Ksp22I TGATCA 2 cut(s) 298, 607
KspAI GTTAAC 1 cut(s) 2043
LmnI GCTCC 2 cut(s) 736, 2003
Lsp1109I GCAGC 1 cut(s) 875
LweI GCATC 4 cut(s) 607, 629, 917, 1955
MaeI CTAG 4 cut(s) 20, 1568, 1671, 1931
MaeII ACGT 1 cut(s) 1384
MaeIII GTNAC 6 cut(s) 356, 366, 698, 785, 1345, 1673
MbiI CCGCTC 1 cut(s) 2006
MboII GAAGA 9 cut(s) 286, 460, 513, 590, 974, 1125, 1381, 1726, 2112
MflI RGATCY 2 cut(s) 1731, 1921
MhlI GDGCHC 2 cut(s) 441, 1561
MluI ACGCGT 1 cut(s) 1855
MlyI GAGTC 4 cut(s) 835, 1006, 1419, 1573
MmeI TCCRAC 6 cut(s) 285, 455, 854, 1465, 1949, 2104
Mph1103I ATGCAT 4 cut(s) 64, 622, 1882, 1970
MroXI GAANNNNTTC 1 cut(s) 2131
MseI TTAA 7 cut(s) 912, 1124, 1241, 1265, 1410, 1499, 2042
MslI CAYNNNNRTG 4 cut(s) 625, 759, 1485, 2036
MspA1I CMGCKG 1 cut(s) 1133
MspI CCGG 3 cut(s) 306, 404, 432
MspR9I CCNGG 4 cut(s) 306, 324, 405, 432
Mva1269I GAATGC 5 cut(s) 1476, 1647, 1913, 1968, 2084
MvaI CCWGG 1 cut(s) 324
MvnI CGCG 3 cut(s) 685, 728, 1857
MwoI GCNNNNNNNGC 3 cut(s) 68, 1624, 1910
NciI CCSGG 3 cut(s) 306, 405, 432
NcoI CCATGG 1 cut(s) 642
NlaIV GGNNCC 3 cut(s) 428, 429, 1923
NmuCI GTSAC 3 cut(s) 356, 366, 1345
NsiI ATGCAT 4 cut(s) 64, 622, 1882, 1970
NspI RCATGY 4 cut(s) 758, 1281, 1516, 2059
NspV TTCGAA 1 cut(s) 566
PagI TCATGA 1 cut(s) 1945
PciI ACATGT 2 cut(s) 754, 2055
PctI GAATGC 5 cut(s) 1476, 1647, 1913, 1968, 2084
PdmI GAANNNNTTC 1 cut(s) 2131
PfoI TCCNGGA 1 cut(s) 304
PkrI GCNGC 1 cut(s) 890
PleI GAGTC 4 cut(s) 835, 1006, 1419, 1573
PpsI GAGTC 4 cut(s) 835, 1006, 1419, 1573
PpuMI RGGWCCY 1 cut(s) 427
PscI ACATGT 2 cut(s) 754, 2055
PsiI TTATAA 2 cut(s) 348, 1332
Psp124BI GAGCTC 1 cut(s) 1561
Psp1406I AACGTT 1 cut(s) 1384
Psp5II RGGWCCY 1 cut(s) 427
Psp6I CCWGG 1 cut(s) 322
PspGI CCWGG 1 cut(s) 322
PspN4I GGNNCC 3 cut(s) 428, 429, 1923
PspPI GGNCC 2 cut(s) 427, 1322
PspPPI RGGWCCY 1 cut(s) 427
PsuI RGATCY 2 cut(s) 1731, 1921
PvuII CAGCTG 1 cut(s) 1133
RseI CAYNNNNRTG 4 cut(s) 625, 759, 1485, 2036
SacI GAGCTC 1 cut(s) 1561
SalI GTCGAC 1 cut(s) 1009
SaqAI TTAA 7 cut(s) 912, 1124, 1241, 1265, 1410, 1499, 2042
SatI GCNGC 1 cut(s) 889
Sau96I GGNCC 2 cut(s) 427, 1322
ScaI AGTACT 3 cut(s) 190, 935, 1634
SchI GAGTC 4 cut(s) 835, 1006, 1419, 1573
ScrFI CCNGG 4 cut(s) 306, 324, 405, 432
SduI GDGCHC 2 cut(s) 441, 1561
SfaNI GCATC 4 cut(s) 607, 629, 917, 1955
SfcI CTRYAG 1 cut(s) 2089
SfuI TTCGAA 1 cut(s) 566
SinI GGWCC 2 cut(s) 427, 1322
SmiMI CAYNNNNRTG 4 cut(s) 625, 759, 1485, 2036
SmlI CTYRAG 2 cut(s) 1608, 1636
SmoI CTYRAG 2 cut(s) 1608, 1636
SsiI CCGC 1 cut(s) 2006
SspI AATATT 1 cut(s) 208
SspMI CTAG 4 cut(s) 20, 1568, 1671, 1931
SstI GAGCTC 1 cut(s) 1561
StyD4I CCNGG 4 cut(s) 304, 322, 403, 430
StyI CCWWGG 3 cut(s) 114, 642, 892
TaaI ACNGT 6 cut(s) 395, 698, 713, 1402, 1870, 2122
TaiI ACGT 1 cut(s) 1387
TaqI TCGA 9 cut(s) 5, 420, 566, 663, 793, 960, 1010, 1596, 2147
TatI WGTACW 7 cut(s) 188, 390, 933, 1027, 1069, 1509, 1632
Tru1I TTAA 7 cut(s) 912, 1124, 1241, 1265, 1410, 1499, 2042
Tru9I TTAA 7 cut(s) 912, 1124, 1241, 1265, 1410, 1499, 2042
TscAI CASTG 5 cut(s) 400, 718, 976, 1057, 1407
TseFI GTSAC 3 cut(s) 356, 366, 1345
TseI GCWGC 1 cut(s) 888
Tsp45I GTSAC 3 cut(s) 356, 366, 1345
TspGWI ACGGA 2 cut(s) 279, 1218
TspRI CASTG 5 cut(s) 400, 718, 976, 1057, 1407
VpaK11BI GGWCC 2 cut(s) 427, 1322
XapI RAATTY 3 cut(s) 46, 767, 1118
XbaI TCTAGA 1 cut(s) 1567
XceI RCATGY 4 cut(s) 758, 1281, 1516, 2059
XcmI CCANNNNNNNNNTGG 2 cut(s) 38, 938
XmiI GTMKAC 2 cut(s) 1010, 1981
XmnI GAANNNNTTC 1 cut(s) 2131
XspI CTAG 4 cut(s) 20, 1568, 1671, 1931
ZrmI AGTACT 3 cut(s) 190, 935, 1634
Zsp2I ATGCAT 4 cut(s) 64, 622, 1882, 1970
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.