RLG00000032844

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
19775726 .. 19776398
673 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032844

Sequence Viewer

Length: 432 bp
ATGATCGAACTGGAAGCAAATACTAAGAGGATTGTCAGGACATATGGTTACATGTCACCTGAGTATGTCTTTGGAGAGAACTTCTCCATAAAGTTCGATATGTATAATTTTGGAGTCTTGGTGCTTGAAATCGTAAGTGGTAGGAGAAACAACAAAAGCTTCCACAATGATGATTGCGTGCTTACTTTAGCAGAAGGATATACATGGGAGCTATGGAAAAAAGGTGCAGCACTAGAGCTGATCGATCCAATGCTAGGCAATTCTTGTGATGAGGATCAATTGTTAAGATGCATCCATGCCGGTCTTCTCTGCGTGGAAGAGAATGCAACTGATCGGTTGAACATGTCGGAAATCATATCTATGTTGACAAATGAAAGCGTGCCTTTACCTAAACCAACAAAGCCAGCATTTTGTACAAAGAGAAATGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

144

Amino Acids

16.3

Weight (kDa)

5.06

Isoelectric Point (pI)

51.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 14 - 70 2.2e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 239, 282
AfaI GTAC 1 cut(s) 415
AfiI CCNNNNNNNGG 1 cut(s) 254
AflIII ACRYGT 2 cut(s) 51, 342
AgsI TTSAA 2 cut(s) 128, 340
AluBI AGCT 3 cut(s) 159, 211, 238
AluI AGCT 3 cut(s) 159, 211, 238
AlwI GGATC 2 cut(s) 239, 282
ApeKI GCWGC 1 cut(s) 227
AsuHPI GGTGA 1 cut(s) 48
BbsI GAAGAC 1 cut(s) 296
BbvI GCAGC 1 cut(s) 239
BfaI CTAG 2 cut(s) 233, 254
BisI GCNGC 1 cut(s) 228
BlsI GCNGC 1 cut(s) 229
BmsI GCATC 2 cut(s) 278, 300
BpiI GAAGAC 1 cut(s) 296
BplI GAGNNNNNCTC 2 cut(s) 68, 100
Bsa29I ATCGAT 1 cut(s) 243
BsaBI GATNNNNATC 1 cut(s) 273
BsaXI ACNNNNNCTCC 2 cut(s) 105, 135
Bsc4I CCNNNNNNNGG 1 cut(s) 254
Bse118I RCCGGY 1 cut(s) 299
Bse1I ACTGG 1 cut(s) 15
Bse8I GATNNNNATC 1 cut(s) 273
BseCI ATCGAT 1 cut(s) 243
BseGI GGATG 1 cut(s) 291
BseJI GATNNNNATC 1 cut(s) 273
BseLI CCNNNNNNNGG 1 cut(s) 254
BseMII CTCAG 1 cut(s) 51
BseNI ACTGG 1 cut(s) 15
BseXI GCAGC 1 cut(s) 239
BsgI GTGCAG 1 cut(s) 246
BshVI ATCGAT 1 cut(s) 243
BsiSI CCGG 1 cut(s) 300
BslI CCNNNNNNNGG 1 cut(s) 254
BsmI GAATGC 1 cut(s) 328
Bsp1407I TGTACA 1 cut(s) 413
Bsp143I GATC 5 cut(s) 3, 240, 244, 274, 331
BspCNI CTCAG 1 cut(s) 52
BspDI ATCGAT 1 cut(s) 243
BspPI GGATC 2 cut(s) 239, 282
BsrFI RCCGGY 1 cut(s) 299
BsrGI TGTACA 1 cut(s) 413
BsrI ACTGG 1 cut(s) 15
BssAI RCCGGY 1 cut(s) 299
BssMI GATC 5 cut(s) 3, 240, 244, 274, 331
Bst6I CTCTTC 1 cut(s) 312
BstAUI TGTACA 1 cut(s) 413
BstC8I GCNNGC 3 cut(s) 179, 380, 405
BstDEI CTNAG 2 cut(s) 24, 60
BstF5I GGATG 1 cut(s) 291
BstKTI GATC 5 cut(s) 6, 243, 247, 277, 334
BstMBI GATC 5 cut(s) 3, 240, 244, 274, 331
BstNSI RCATGY 2 cut(s) 55, 346
BstV1I GCAGC 1 cut(s) 239
BstV2I GAAGAC 1 cut(s) 296
Bsu15I ATCGAT 1 cut(s) 243
BsuTUI ATCGAT 1 cut(s) 243
BtsCI GGATG 1 cut(s) 291
Cac8I GCNNGC 3 cut(s) 179, 380, 405
Cfr10I RCCGGY 1 cut(s) 299
ClaI ATCGAT 1 cut(s) 243
Csp6I GTAC 1 cut(s) 414
CviAII CATG 4 cut(s) 52, 204, 296, 343
CviJI RGCY 4 cut(s) 159, 211, 238, 403
CviKI_1 RGCY 4 cut(s) 159, 211, 238, 403
CviQI GTAC 1 cut(s) 414
DdeI CTNAG 2 cut(s) 24, 60
DpnI GATC 5 cut(s) 5, 242, 246, 276, 333
DpnII GATC 5 cut(s) 3, 240, 244, 274, 331
Eam1104I CTCTTC 1 cut(s) 312
EarI CTCTTC 1 cut(s) 312
EcoT22I ATGCAT 1 cut(s) 293
FaeI CATG 4 cut(s) 55, 207, 299, 346
FalI AAGNNNNNCTT 2 cut(s) 367, 399
FatI CATG 4 cut(s) 51, 203, 295, 342
FauNDI CATATG 1 cut(s) 43
Fnu4HI GCNGC 1 cut(s) 228
FokI GGATG 1 cut(s) 278
Fsp4HI GCNGC 1 cut(s) 228
FspBI CTAG 2 cut(s) 233, 254
GluI GCNGC 1 cut(s) 228
HapII CCGG 1 cut(s) 300
Hin1II CATG 4 cut(s) 55, 207, 299, 346
HincII GTYRAC 1 cut(s) 366
HindII GTYRAC 1 cut(s) 366
HindIII AAGCTT 1 cut(s) 157
HinfI GANTC 1 cut(s) 114
HpaII CCGG 1 cut(s) 300
HphI GGTGA 1 cut(s) 48
Hpy166II GTNNAC 1 cut(s) 366
Hpy188I TCNGA 2 cut(s) 349, 431
Hpy188III TCNNGA 1 cut(s) 37
Hpy8I GTNNAC 1 cut(s) 366
HpyAV CCTTC 1 cut(s) 188
HpyCH4V TGCA 3 cut(s) 227, 291, 326
HpyF3I CTNAG 2 cut(s) 24, 60
Hsp92II CATG 4 cut(s) 55, 207, 299, 346
Kzo9I GATC 5 cut(s) 3, 240, 244, 274, 331
LmnI GCTCC 1 cut(s) 208
LpnPI CCDG 4 cut(s) 22, 72, 313, 417
Lsp1109I GCAGC 1 cut(s) 239
LweI GCATC 2 cut(s) 278, 300
MaeI CTAG 2 cut(s) 233, 254
MaeIII GTNAC 2 cut(s) 47, 54
MalI GATC 5 cut(s) 5, 242, 246, 276, 333
MboI GATC 5 cut(s) 3, 240, 244, 274, 331
MboII GAAGA 2 cut(s) 296, 329
MfeI CAATTG 1 cut(s) 278
MluCI AATT 3 cut(s) 106, 259, 278
MlyI GAGTC 1 cut(s) 123
MmeI TCCRAC 1 cut(s) 327
MnlI CCTC 2 cut(s) 21, 265
Mph1103I ATGCAT 1 cut(s) 293
MseI TTAA 1 cut(s) 284
MslI CAYNNNNRTG 2 cut(s) 168, 359
MspI CCGG 1 cut(s) 300
MunI CAATTG 1 cut(s) 278
Mva1269I GAATGC 1 cut(s) 328
NdeI CATATG 1 cut(s) 43
NdeII GATC 5 cut(s) 3, 240, 244, 274, 331
NlaIII CATG 4 cut(s) 55, 207, 299, 346
NmuCI GTSAC 1 cut(s) 54
NsiI ATGCAT 1 cut(s) 293
NspI RCATGY 2 cut(s) 55, 346
PciI ACATGT 2 cut(s) 51, 342
PctI GAATGC 1 cut(s) 328
PkrI GCNGC 1 cut(s) 229
PleI GAGTC 1 cut(s) 122
PpsI GAGTC 1 cut(s) 122
PscI ACATGT 2 cut(s) 51, 342
RsaI GTAC 1 cut(s) 415
RsaNI GTAC 1 cut(s) 414
RseI CAYNNNNRTG 2 cut(s) 168, 359
SaqAI TTAA 1 cut(s) 284
SatI GCNGC 1 cut(s) 228
Sau3AI GATC 5 cut(s) 3, 240, 244, 274, 331
SchI GAGTC 1 cut(s) 123
SetI ASST 6 cut(s) 61, 161, 213, 226, 240, 391
SfaNI GCATC 2 cut(s) 278, 300
SmiMI CAYNNNNRTG 2 cut(s) 168, 359
Sse9I AATT 3 cut(s) 106, 259, 278
SspMI CTAG 2 cut(s) 233, 254
TaqI TCGA 3 cut(s) 6, 96, 243
TasI AATT 3 cut(s) 106, 259, 278
TatI WGTACW 1 cut(s) 413
Tru1I TTAA 1 cut(s) 284
Tru9I TTAA 1 cut(s) 284
TseFI GTSAC 1 cut(s) 54
TseI GCWGC 1 cut(s) 227
Tsp45I GTSAC 1 cut(s) 54
TspDTI ATGAA 1 cut(s) 387
XceI RCATGY 2 cut(s) 55, 346
XspI CTAG 2 cut(s) 233, 254
Zsp2I ATGCAT 1 cut(s) 293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.