Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000096

Physical Location & Seq

Genomic Coordinates Reverse (-)

75073733 .. 75077607

Gene Structure 3875 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00053860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1332 bp

ATGCTCAATTCATCGAGCTCCTTAGTCTCCAAAACGGGGAAGTTCACTTTGGGGTTCTTTGAAAATGGAAACTCGAAAACCAGTTATCTATCAATCTATCATATCAATGCTGGAAATTCTATAAATTATGCATGGATTGCCAAACGGAAAACACCCATTTTATACCCAACAGGAGTTCTTACCTTGGACAAGAACAGCACATTGAAAGTTACCCAAAATAGTGGTGATCCTCTGCTTCTTTACTCTGCTTTGGAAAGTAGTACCAATAATATCAGTGTTGTTGCTACCCTTTTGGATTCTGGCAATTTCATTCTACAACAAGTAAACTCCGACGGATTAACAAAGAGGGTGTTGTGGCAAAGTTTTGATCATCCTGGAAACACACTTTTGCCAGGTATGAAGTTATGTGTTGACCATAAAAATGGTTACATTTGGACACTTTCATCATGGTTGAGTCTGTACAACACAGAACCGGGGGCTTTCACTCTCGATTGGGACCACACTGAACACCAGTTGAAGATCAGGCAGCGCGGGAAGGTTGGTTGGAGTGGCAGTGTCTTTACTTACCAATGGAAGATTCAAAAGATGAGGTACAACTATACCATTGTTTCAAATGAGAATGAAGATTACTTTACTTATACTGCAGTAGATGACCAAAGTGATGGATCCCAATGGGTGATGAATGTACTGGGGCGGCTACGTGACTTTGATATAAACATTGATATTGTGCGAGCAGATTACTGTTATGGCCATTACAACGATAGAGGGTGTGAGAGATGGGAGCAGCCTGGTTGCAGACATGTTGGTGATCGATTTGAGCTACAACAAGGTTATTTTCAAGCAATTACCAGCTCTGCTTCATTTACGAGTAATTCAAATACGAGTCAGGATATAGTGATTGTAAAGCAACTTGTTGGAACTATTGTGGCTGCCTTGCTATGCGCATCTATCACGGCTGCCACATGCAACTTCTCCAAGGAAAACAAGCTCGGAGAAGGGGGCTTTGGACCTGTTTATAAGGGAAAATTGGTGACCGGACAAGAATTAGCTGTGAAGAGGCTTTCAGAATGTTCAGGGCAAGGAACATTAGAGTTTAAAAATGAACTGATACTTATATATGAGCTCCAACATACAAAACTCGTTCAGCTTTTTGGATTTTGCATTCATGGTGATGAGAGGATGTTGATATATGAGTACATGCCAAAAAAAAACACCTCCATCAAACCCGAAGCTAGCATCGCCTGTGCAGACCCACACCTGAAACTAGCACCGCGGAGGCTTATGGTGTCCATCGTCTCCACTGCAGCACCTGAGCACCTCCATCAAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

443

Amino Acids

49.71

Weight (kDa)

7.59

Isoelectric Point (pI)

30.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	44 - 150	1e-23	D-mannose binding lectin
Pkinase	PF00069	324 - 404	5.8e-10	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	326 - 402	2.9e-12	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000096)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica	MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica	Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis	pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis	RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata	RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora	Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa	Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha	Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana	Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1017
Acc16I	TGCGCA	1 cut(s)	943
AccII	CGCG	2 cut(s)	531, 1273
AciI	CCGC	4 cut(s)	531, 694, 1271, 1273
AclWI	GGATC	3 cut(s)	221, 660, 673
AcoI	YGGCCR	1 cut(s)	748
AcsI	RAATTY	1 cut(s)	115
AfaI	GTAC	5 cut(s)	262, 461, 593, 687, 1196
AfiI	CCNNNNNNNGG	1 cut(s)	36
AflIII	ACRYGT	1 cut(s)	799
AgsI	TTSAA	7 cut(s)	62, 205, 517, 581, 612, 839, 876
AjnI	CCWGG	3 cut(s)	373, 391, 787
AjuI	GAANNNNNNNTTGG	6 cut(s)	32, 64, 561, 593, 987, 1019
AluBI	AGCT	8 cut(s)	18, 820, 852, 988, 1049, 1123, 1147, 1232
AluI	AGCT	8 cut(s)	18, 820, 852, 988, 1049, 1123, 1147, 1232
Alw21I	GWGCWC	3 cut(s)	20, 1125, 1317
Alw26I	GTCTC	2 cut(s)	31, 1300
AlwI	GGATC	3 cut(s)	221, 660, 673
AlwNI	CAGNNNCTG	1 cut(s)	1310
AoxI	GGCC	1 cut(s)	748
ApeKI	GCWGC	5 cut(s)	526, 784, 929, 956, 1304
ApoI	RAATTY	1 cut(s)	115
AspLEI	GCGC	2 cut(s)	531, 944
AspS9I	GGNCC	2 cut(s)	496, 1007
AsuC2I	CCSGG	1 cut(s)	474
AsuHPI	GGTGA	5 cut(s)	236, 688, 818, 1042, 1181
AsuNHI	GCTAGC	1 cut(s)	1232
AvaII	GGWCC	2 cut(s)	496, 1007
BalI	TGGCCA	1 cut(s)	750
BamHI	GGATCC	1 cut(s)	665
BanII	GRGCYC	2 cut(s)	20, 1125
Bbv12I	GWGCWC	3 cut(s)	20, 1125, 1317
BbvI	GCAGC	5 cut(s)	538, 796, 916, 943, 1316
BccI	CCATC	5 cut(s)	656, 771, 1226, 1298, 1329
BceAI	ACGGC	1 cut(s)	969
BciT130I	CCWGG	3 cut(s)	375, 393, 789
BclI	TGATCA	1 cut(s)	367
BcnI	CCSGG	1 cut(s)	474
BcoDI	GTCTC	2 cut(s)	31, 1300
BfaI	CTAG	2 cut(s)	1233, 1265
BfmI	CTRYAG	2 cut(s)	642, 1302
BisI	GCNGC	6 cut(s)	527, 695, 785, 930, 957, 1305
BlsI	GCNGC	6 cut(s)	528, 696, 786, 931, 958, 1306
Bme1390I	CCNGG	4 cut(s)	375, 393, 474, 789
Bme18I	GGWCC	2 cut(s)	496, 1007
BmgT120I	GGNCC	2 cut(s)	496, 1007
BmiI	GGNNCC	2 cut(s)	497, 667
BmrFI	CCNGG	4 cut(s)	375, 393, 474, 789
BmrI	ACTGGG	1 cut(s)	698
BmsI	GCATC	2 cut(s)	953, 1245
BmtI	GCTAGC	1 cut(s)	1236
BmuI	ACTGGG	1 cut(s)	698
Bpu10I	CCTNAGC	1 cut(s)	1311
BpuMI	CCSGG	1 cut(s)	474
Bsa29I	ATCGAT	1 cut(s)	811
BsaAI	YACGTR	1 cut(s)	701
BsaJI	CCNNGG	4 cut(s)	183, 473, 975, 1271
BsaWI	WCCGGW	1 cut(s)	1034
BsaXI	ACNNNNNCTCC	2 cut(s)	538, 568
Bsc4I	CCNNNNNNNGG	1 cut(s)	36
Bse1I	ACTGG	3 cut(s)	81, 511, 693
BseBI	CCWGG	3 cut(s)	375, 393, 789
BseCI	ATCGAT	1 cut(s)	811
BseDI	CCNNGG	4 cut(s)	183, 473, 975, 1271
BseGI	GGATG	2 cut(s)	370, 1185
BseLI	CCNNNNNNNGG	1 cut(s)	36
BseMII	CTCAG	1 cut(s)	1302
BseNI	ACTGG	3 cut(s)	81, 511, 693
BseXI	GCAGC	5 cut(s)	538, 796, 916, 943, 1316
BsgI	GTGCAG	1 cut(s)	1266
Bsh1236I	CGCG	2 cut(s)	531, 1273
BshFI	GGCC	1 cut(s)	750
BshVI	ATCGAT	1 cut(s)	811
BsiHKAI	GWGCWC	3 cut(s)	20, 1125, 1317
BsiSI	CCGG	2 cut(s)	473, 1035
BslFI	GGGAC	1 cut(s)	509
BslI	CCNNNNNNNGG	1 cut(s)	36
BsmAI	GTCTC	2 cut(s)	31, 1300
BsmBI	CGTCTC	1 cut(s)	1300
BsmFI	GGGAC	1 cut(s)	509
BsmI	GAATGC	1 cut(s)	1161
BsnI	GGCC	1 cut(s)	750
Bsp1286I	GDGCHC	3 cut(s)	20, 1125, 1317
Bsp1407I	TGTACA	1 cut(s)	459
Bsp143I	GATC	5 cut(s)	226, 367, 519, 665, 808
BspACI	CCGC	4 cut(s)	531, 694, 1271, 1273
BspANI	GGCC	1 cut(s)	750
BspCNI	CTCAG	1 cut(s)	1303
BspDI	ATCGAT	1 cut(s)	811
BspFNI	CGCG	2 cut(s)	531, 1273
BspLI	GGNNCC	2 cut(s)	497, 667
BspMAI	CTGCAG	2 cut(s)	646, 1306
BspOI	GCTAGC	1 cut(s)	1236
BspPI	GGATC	3 cut(s)	221, 660, 673
BsrGI	TGTACA	1 cut(s)	459
BsrI	ACTGG	3 cut(s)	81, 511, 693
BssECI	CCNNGG	4 cut(s)	183, 473, 975, 1271
BssMI	GATC	5 cut(s)	226, 367, 519, 665, 808
BssT1I	CCWWGG	2 cut(s)	183, 975
Bst2UI	CCWGG	3 cut(s)	375, 393, 789
Bst4CI	ACNGT	1 cut(s)	743
Bst6I	CTCTTC	1 cut(s)	1049
BstAPI	GCANNNNNTGC	1 cut(s)	137
BstAUI	TGTACA	1 cut(s)	459
BstBAI	YACGTR	1 cut(s)	701
BstC8I	GCNNGC	2 cut(s)	732, 1234
BstDEI	CTNAG	2 cut(s)	22, 1311
BstDSI	CCRYGG	1 cut(s)	1271
BstEII	GGTNACC	1 cut(s)	1030
BstF5I	GGATG	2 cut(s)	370, 1185
BstFNI	CGCG	2 cut(s)	531, 1273
BstHHI	GCGC	2 cut(s)	531, 944
BstKTI	GATC	5 cut(s)	229, 370, 522, 668, 811
BstMAI	GTCTC	2 cut(s)	31, 1300
BstMBI	GATC	5 cut(s)	226, 367, 519, 665, 808
BstMWI	GCNNNNNNNGC	2 cut(s)	137, 1238
BstNI	CCWGG	3 cut(s)	375, 393, 789
BstNSI	RCATGY	3 cut(s)	803, 966, 1201
BstPI	GGTNACC	1 cut(s)	1030
BstSCI	CCNGG	4 cut(s)	373, 391, 472, 787
BstSFI	CTRYAG	2 cut(s)	642, 1302
BstUI	CGCG	2 cut(s)	531, 1273
BstV1I	GCAGC	5 cut(s)	538, 796, 916, 943, 1316
BstX2I	RGATCY	1 cut(s)	665
BstXI	CCANNNNNNTGG	3 cut(s)	221, 422, 662
BstYI	RGATCY	1 cut(s)	665
Bsu15I	ATCGAT	1 cut(s)	811
BsuRI	GGCC	1 cut(s)	750
BsuTUI	ATCGAT	1 cut(s)	811
BtgI	CCRYGG	1 cut(s)	1271
BtgZI	GCGATG	1 cut(s)	1222
BtsCI	GGATG	2 cut(s)	370, 1185
BtsI	GCAGTG	2 cut(s)	559, 1299
BtsIMutI	CAGTG	4 cut(s)	280, 501, 559, 1299
Cac8I	GCNNGC	2 cut(s)	732, 1234
CaiI	CAGNNNCTG	1 cut(s)	1310
CfoI	GCGC	2 cut(s)	531, 944
Cfr13I	GGNCC	2 cut(s)	496, 1007
Cfr42I	CCGCGG	1 cut(s)	1274
ClaI	ATCGAT	1 cut(s)	811
Csp6I	GTAC	5 cut(s)	261, 460, 592, 686, 1195
CviAII	CATG	6 cut(s)	132, 447, 800, 963, 1166, 1198
CviQI	GTAC	5 cut(s)	261, 460, 592, 686, 1195
DdeI	CTNAG	2 cut(s)	22, 1311
DpnI	GATC	5 cut(s)	228, 369, 521, 667, 810
DpnII	GATC	5 cut(s)	226, 367, 519, 665, 808
DraI	TTTAAA	1 cut(s)	1096
EaeI	YGGCCR	1 cut(s)	748
Eam1104I	CTCTTC	1 cut(s)	1049
EarI	CTCTTC	1 cut(s)	1049
Ecl136II	GAGCTC	2 cut(s)	18, 1123
Eco130I	CCWWGG	2 cut(s)	183, 975
Eco24I	GRGCYC	2 cut(s)	20, 1125
Eco47I	GGWCC	2 cut(s)	496, 1007
Eco53kI	GAGCTC	2 cut(s)	18, 1123
Eco91I	GGTNACC	1 cut(s)	1030
EcoICRI	GAGCTC	2 cut(s)	18, 1123
EcoO65I	GGTNACC	1 cut(s)	1030
EcoRII	CCWGG	3 cut(s)	373, 391, 787
EcoT14I	CCWWGG	2 cut(s)	183, 975
EcoT22I	ATGCAT	1 cut(s)	133
EcoT38I	GRGCYC	2 cut(s)	20, 1125
ErhI	CCWWGG	2 cut(s)	183, 975
Esp3I	CGTCTC	1 cut(s)	1300
FaeI	CATG	6 cut(s)	135, 450, 803, 966, 1169, 1201
FaqI	GGGAC	1 cut(s)	509
FatI	CATG	6 cut(s)	131, 446, 799, 962, 1165, 1197
FauI	CCCGC	1 cut(s)	524
FbaI	TGATCA	1 cut(s)	367
Fnu4HI	GCNGC	6 cut(s)	527, 695, 785, 930, 957, 1305
FokI	GGATG	2 cut(s)	357, 1192
FriOI	GRGCYC	2 cut(s)	20, 1125
Fsp4HI	GCNGC	6 cut(s)	527, 695, 785, 930, 957, 1305
FspAI	RTGCGCAY	1 cut(s)	943
FspBI	CTAG	2 cut(s)	1233, 1265
FspI	TGCGCA	1 cut(s)	943
GlaI	GCGC	2 cut(s)	530, 943
GluI	GCNGC	6 cut(s)	527, 695, 785, 930, 957, 1305
HaeIII	GGCC	1 cut(s)	750
HapII	CCGG	2 cut(s)	473, 1035
HhaI	GCGC	2 cut(s)	531, 944
Hin1II	CATG	6 cut(s)	135, 450, 803, 966, 1169, 1201
Hin6I	GCGC	2 cut(s)	529, 942
HinP1I	GCGC	2 cut(s)	529, 942
HincII	GTYRAC	1 cut(s)	412
HindII	GTYRAC	1 cut(s)	412
HinfI	GANTC	4 cut(s)	296, 454, 577, 883
HpaII	CCGG	2 cut(s)	473, 1035
HphI	GGTGA	5 cut(s)	236, 688, 818, 1042, 1181
Hpy166II	GTNNAC	3 cut(s)	45, 325, 412
Hpy188I	TCNGA	3 cut(s)	331, 992, 1066
Hpy188III	TCNNGA	2 cut(s)	488, 887
Hpy8I	GTNNAC	3 cut(s)	45, 325, 412
Hpy99I	CGWCG	1 cut(s)	335
HpyAV	CCTTC	2 cut(s)	529, 989
HpyCH4III	ACNGT	1 cut(s)	743
HpyCH4IV	ACGT	1 cut(s)	700
HpyCH4V	TGCA	7 cut(s)	131, 644, 795, 966, 1161, 1247, 1304
HpyF10VI	GCNNNNNNNGC	2 cut(s)	137, 1238
HpyF3I	CTNAG	2 cut(s)	22, 1311
HpySE526I	ACGT	1 cut(s)	700
Hsp92II	CATG	6 cut(s)	135, 450, 803, 966, 1169, 1201
HspAI	GCGC	2 cut(s)	529, 942
Ksp22I	TGATCA	1 cut(s)	367
KspI	CCGCGG	1 cut(s)	1274
Kzo9I	GATC	5 cut(s)	226, 367, 519, 665, 808
LmnI	GCTCC	3 cut(s)	23, 781, 1128
Lsp1109I	GCAGC	5 cut(s)	538, 796, 916, 943, 1316
LweI	GCATC	2 cut(s)	953, 1245
MaeI	CTAG	2 cut(s)	1233, 1265
MaeII	ACGT	1 cut(s)	700
MaeIII	GTNAC	4 cut(s)	208, 425, 701, 1030
MalI	GATC	5 cut(s)	228, 369, 521, 667, 810
MboI	GATC	5 cut(s)	226, 367, 519, 665, 808
MboII	GAAGA	4 cut(s)	529, 586, 635, 1066
MflI	RGATCY	1 cut(s)	665
MhlI	GDGCHC	3 cut(s)	20, 1125, 1317
MlsI	TGGCCA	1 cut(s)	750
MluCI	AATT	8 cut(s)	7, 115, 124, 304, 843, 871, 1025, 1043
MluNI	TGGCCA	1 cut(s)	750
MlyI	GAGTC	2 cut(s)	463, 892
MmeI	TCCRAC	4 cut(s)	354, 524, 895, 1150
MnlI	CCTC	9 cut(s)	240, 339, 582, 758, 1050, 1170, 1225, 1269, 1328
Mox20I	TGGCCA	1 cut(s)	750
Mph1103I	ATGCAT	1 cut(s)	133
MscI	TGGCCA	1 cut(s)	750
MseI	TTAA	2 cut(s)	338, 1095
MslI	CAYNNNNRTG	4 cut(s)	105, 420, 804, 1170
Msp20I	TGGCCA	1 cut(s)	750
MspA1I	CMGCKG	1 cut(s)	1273
MspI	CCGG	2 cut(s)	473, 1035
MspR9I	CCNGG	4 cut(s)	375, 393, 474, 789
Mva1269I	GAATGC	1 cut(s)	1161
MvaI	CCWGG	3 cut(s)	375, 393, 789
MvnI	CGCG	2 cut(s)	531, 1273
MwoI	GCNNNNNNNGC	2 cut(s)	137, 1238
NciI	CCSGG	1 cut(s)	474
NdeII	GATC	5 cut(s)	226, 367, 519, 665, 808
NheI	GCTAGC	1 cut(s)	1232
NlaIII	CATG	6 cut(s)	135, 450, 803, 966, 1169, 1201
NlaIV	GGNNCC	2 cut(s)	497, 667
NmuCI	GTSAC	2 cut(s)	701, 1030
NsbI	TGCGCA	1 cut(s)	943
NsiI	ATGCAT	1 cut(s)	133
NspI	RCATGY	3 cut(s)	803, 966, 1201
PciI	ACATGT	1 cut(s)	799
PctI	GAATGC	1 cut(s)	1161
PfeI	GAWTC	2 cut(s)	296, 577
PfoI	TCCNGGA	1 cut(s)	373
PkrI	GCNGC	6 cut(s)	528, 696, 786, 931, 958, 1306
PleI	GAGTC	2 cut(s)	462, 891
PpsI	GAGTC	2 cut(s)	462, 891
Ppu21I	YACGTR	1 cut(s)	701
PscI	ACATGT	1 cut(s)	799
PsiI	TTATAA	1 cut(s)	1017
Psp124BI	GAGCTC	2 cut(s)	20, 1125
Psp6I	CCWGG	3 cut(s)	373, 391, 787
PspEI	GGTNACC	1 cut(s)	1030
PspGI	CCWGG	3 cut(s)	373, 391, 787
PspN4I	GGNNCC	2 cut(s)	497, 667
PspPI	GGNCC	2 cut(s)	496, 1007
PstI	CTGCAG	2 cut(s)	646, 1306
PstNI	CAGNNNCTG	1 cut(s)	1310
PsuI	RGATCY	1 cut(s)	665
RsaI	GTAC	5 cut(s)	262, 461, 593, 687, 1196
RsaNI	GTAC	5 cut(s)	261, 460, 592, 686, 1195
RseI	CAYNNNNRTG	4 cut(s)	105, 420, 804, 1170
SacI	GAGCTC	2 cut(s)	20, 1125
SacII	CCGCGG	1 cut(s)	1274
SaqAI	TTAA	2 cut(s)	338, 1095
SatI	GCNGC	6 cut(s)	527, 695, 785, 930, 957, 1305
Sau3AI	GATC	5 cut(s)	226, 367, 519, 665, 808
Sau96I	GGNCC	2 cut(s)	496, 1007
SchI	GAGTC	2 cut(s)	463, 892
ScrFI	CCNGG	4 cut(s)	375, 393, 474, 789
SduI	GDGCHC	3 cut(s)	20, 1125, 1317
SfaNI	GCATC	2 cut(s)	953, 1245
SfcI	CTRYAG	2 cut(s)	642, 1302
Sfr303I	CCGCGG	1 cut(s)	1274
SgrBI	CCGCGG	1 cut(s)	1274
SinI	GGWCC	2 cut(s)	496, 1007
SmiMI	CAYNNNNRTG	4 cut(s)	105, 420, 804, 1170
Sse9I	AATT	8 cut(s)	7, 115, 124, 304, 843, 871, 1025, 1043
SsiI	CCGC	4 cut(s)	531, 694, 1271, 1273
SspMI	CTAG	2 cut(s)	1233, 1265
SstI	GAGCTC	2 cut(s)	20, 1125
StyD4I	CCNGG	4 cut(s)	373, 391, 472, 787
StyI	CCWWGG	2 cut(s)	183, 975
TaaI	ACNGT	1 cut(s)	743
TaiI	ACGT	1 cut(s)	703
TaqI	TCGA	4 cut(s)	14, 74, 489, 811
TasI	AATT	8 cut(s)	7, 115, 124, 304, 843, 871, 1025, 1043
TatI	WGTACW	3 cut(s)	459, 685, 1194
TauI	GCSGC	1 cut(s)	697
TfiI	GAWTC	2 cut(s)	296, 577
Tru1I	TTAA	2 cut(s)	338, 1095
Tru9I	TTAA	2 cut(s)	338, 1095
TscAI	CASTG	4 cut(s)	280, 508, 559, 1306
TseFI	GTSAC	2 cut(s)	701, 1030
TseI	GCWGC	5 cut(s)	526, 784, 929, 956, 1304
Tsp45I	GTSAC	2 cut(s)	701, 1030
TspDTI	ATGAA	8 cut(s)	298, 413, 432, 636, 695, 849, 1116, 1154
TspGWI	ACGGA	2 cut(s)	160, 348
TspRI	CASTG	4 cut(s)	280, 508, 559, 1306
VpaK11BI	GGWCC	2 cut(s)	496, 1007
XapI	RAATTY	1 cut(s)	115
XceI	RCATGY	3 cut(s)	803, 966, 1201
XspI	CTAG	2 cut(s)	1233, 1265
Zsp2I	ATGCAT	1 cut(s)	133

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.