RLG00000032838

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
19662415 .. 19676217
13803 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032838

Sequence Viewer

Length: 372 bp
ATGGCTAGAAGTCTCACCTTATTTTTCATCCTCATTACCCTGTTGGACCCGGGCACCTTTACCCTTATTCAGAGAGTGAAGTCATCCGATGATGATTCGGCTCCTCAAGGAACATTTCGGCCAGGCATGAAGCTAGGTGTGAACCATAGAACCGGCTACAACTGGTTACTTTCATCATCACCAATGTCAAATGTTAATTATCTGCACATATCTACATATACAGGCCGAAATGGGGCAAAGGGAAAATTGGTGACGGGACAAGAAATAGCTGTGAAGAAGCTTTCTAAAAATTCAGGGCAAGGCGCTCTAGAGTTTAAGAATGAACTGTCAAACTGTACAACCATCGCAATGAAACTGAAAAGTCTAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

124

Amino Acids

13.41

Weight (kDa)

9.94

Isoelectric Point (pI)

31.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 53
AcoI YGGCCR 1 cut(s) 119
AcsI RAATTY 1 cut(s) 289
AfaI GTAC 1 cut(s) 337
AfiI CCNNNNNNNGG 1 cut(s) 232
AjnI CCWGG 1 cut(s) 121
AluBI AGCT 4 cut(s) 133, 269, 280, 368
AluI AGCT 4 cut(s) 133, 269, 280, 368
Alw26I GTCTC 1 cut(s) 17
Ama87I CYCGRG 1 cut(s) 49
AoxI GGCC 2 cut(s) 119, 223
ApoI RAATTY 1 cut(s) 289
AspLEI GCGC 1 cut(s) 305
AspS9I GGNCC 1 cut(s) 46
AsuC2I CCSGG 2 cut(s) 50, 51
AsuHPI GGTGA 3 cut(s) 7, 171, 262
AvaI CYCGRG 1 cut(s) 49
AvaII GGWCC 1 cut(s) 46
BaeGI GKGCMC 1 cut(s) 56
BanI GGYRCC 1 cut(s) 53
BccI CCATC 1 cut(s) 350
BciT130I CCWGG 1 cut(s) 123
BcnI CCSGG 2 cut(s) 50, 51
BcoDI GTCTC 1 cut(s) 17
BfaI CTAG 4 cut(s) 6, 134, 308, 365
BfoI RGCGCY 1 cut(s) 306
Bme1390I CCNGG 3 cut(s) 50, 51, 123
Bme18I GGWCC 1 cut(s) 46
BmeT110I CYCGRG 1 cut(s) 49
BmgT120I GGNCC 1 cut(s) 46
BmiI GGNNCC 3 cut(s) 48, 55, 102
BmrFI CCNGG 3 cut(s) 50, 51, 123
BpuEI CTTGAG 1 cut(s) 90
BpuMI CCSGG 2 cut(s) 50, 51
BsaJI CCNNGG 1 cut(s) 49
Bsc4I CCNNNNNNNGG 1 cut(s) 232
Bse118I RCCGGY 1 cut(s) 152
Bse1I ACTGG 1 cut(s) 167
Bse3DI GCAATG 1 cut(s) 354
BseBI CCWGG 1 cut(s) 123
BseDI CCNNGG 1 cut(s) 49
BseGI GGATG 2 cut(s) 27, 83
BseLI CCNNNNNNNGG 1 cut(s) 232
BseMI GCAATG 1 cut(s) 354
BseNI ACTGG 1 cut(s) 167
BseRI GAGGAG 1 cut(s) 93
BseSI GKGCMC 1 cut(s) 56
BsgI GTGCAG 1 cut(s) 188
BshFI GGCC 2 cut(s) 121, 225
BshNI GGYRCC 1 cut(s) 53
BsiHKCI CYCGRG 1 cut(s) 49
BsiSI CCGG 2 cut(s) 50, 153
BslFI GGGAC 1 cut(s) 270
BslI CCNNNNNNNGG 1 cut(s) 232
BsmAI GTCTC 1 cut(s) 17
BsmFI GGGAC 1 cut(s) 270
BsnI GGCC 2 cut(s) 121, 225
BsoBI CYCGRG 1 cut(s) 49
Bsp1286I GDGCHC 1 cut(s) 56
Bsp1407I TGTACA 1 cut(s) 335
BspANI GGCC 2 cut(s) 121, 225
BspLI GGNNCC 3 cut(s) 48, 55, 102
BspT107I GGYRCC 1 cut(s) 53
BsrDI GCAATG 1 cut(s) 354
BsrFI RCCGGY 1 cut(s) 152
BsrGI TGTACA 1 cut(s) 335
BsrI ACTGG 1 cut(s) 167
BssAI RCCGGY 1 cut(s) 152
BssECI CCNNGG 1 cut(s) 49
Bst2UI CCWGG 1 cut(s) 123
Bst4CI ACNGT 2 cut(s) 327, 335
BstAUI TGTACA 1 cut(s) 335
BstF5I GGATG 2 cut(s) 27, 83
BstH2I RGCGCY 1 cut(s) 306
BstHHI GCGC 1 cut(s) 305
BstMAI GTCTC 1 cut(s) 17
BstNI CCWGG 1 cut(s) 123
BstSCI CCNGG 3 cut(s) 48, 49, 121
BstSLI GKGCMC 1 cut(s) 56
BsuRI GGCC 2 cut(s) 121, 225
BtgZI GCGATG 1 cut(s) 328
BtsCI GGATG 2 cut(s) 27, 83
CfoI GCGC 1 cut(s) 305
Cfr10I RCCGGY 1 cut(s) 152
Cfr13I GGNCC 1 cut(s) 46
Cfr9I CCCGGG 1 cut(s) 49
Csp6I GTAC 1 cut(s) 336
CviAII CATG 1 cut(s) 127
CviJI RGCY 9 cut(s) 5, 101, 121, 133, 156, 225, 269, 280, 368
CviKI_1 RGCY 9 cut(s) 5, 101, 121, 133, 156, 225, 269, 280, 368
CviQI GTAC 1 cut(s) 336
EaeI YGGCCR 1 cut(s) 119
Eco47I GGWCC 1 cut(s) 46
Eco88I CYCGRG 1 cut(s) 49
EcoRII CCWGG 1 cut(s) 121
FaeI CATG 1 cut(s) 130
FaiI YATR 5 cut(s) 128, 147, 209, 217, 219
FalI AAGNNNNNCTT 1 cut(s) 352
FaqI GGGAC 1 cut(s) 270
FatI CATG 1 cut(s) 126
FokI GGATG 2 cut(s) 14, 70
FspBI CTAG 4 cut(s) 6, 134, 308, 365
GlaI GCGC 1 cut(s) 304
HaeII RGCGCY 1 cut(s) 306
HaeIII GGCC 2 cut(s) 121, 225
HapII CCGG 2 cut(s) 50, 153
HhaI GCGC 1 cut(s) 305
Hin1II CATG 1 cut(s) 130
Hin6I GCGC 1 cut(s) 303
HinP1I GCGC 1 cut(s) 303
HindIII AAGCTT 1 cut(s) 278
HinfI GANTC 1 cut(s) 95
HpaII CCGG 2 cut(s) 50, 153
HphI GGTGA 3 cut(s) 7, 171, 262
Hpy166II GTNNAC 1 cut(s) 142
Hpy188I TCNGA 2 cut(s) 72, 88
Hpy188III TCNNGA 1 cut(s) 308
Hpy8I GTNNAC 1 cut(s) 142
HpyCH4III ACNGT 2 cut(s) 327, 335
HpyCH4V TGCA 1 cut(s) 205
Hsp92II CATG 1 cut(s) 130
HspAI GCGC 1 cut(s) 303
LmnI GCTCC 1 cut(s) 106
LpnPI CCDG 8 cut(s) 53, 63, 108, 135, 148, 166, 207, 279
MaeI CTAG 4 cut(s) 6, 134, 308, 365
MaeIII GTNAC 2 cut(s) 165, 250
MboII GAAGA 1 cut(s) 286
MhlI GDGCHC 1 cut(s) 56
MluCI AATT 3 cut(s) 196, 245, 289
MmeI TCCRAC 1 cut(s) 24
MnlI CCTC 2 cut(s) 41, 114
MseI TTAA 2 cut(s) 195, 315
MslI CAYNNNNRTG 1 cut(s) 347
MspI CCGG 2 cut(s) 50, 153
MspR9I CCNGG 3 cut(s) 50, 51, 123
MvaI CCWGG 1 cut(s) 123
NciI CCSGG 2 cut(s) 50, 51
NlaIII CATG 1 cut(s) 130
NlaIV GGNNCC 3 cut(s) 48, 55, 102
NmuCI GTSAC 1 cut(s) 250
PfeI GAWTC 1 cut(s) 95
Psp6I CCWGG 1 cut(s) 121
PspGI CCWGG 1 cut(s) 121
PspN4I GGNNCC 3 cut(s) 48, 55, 102
PspPI GGNCC 1 cut(s) 46
RsaI GTAC 1 cut(s) 337
RsaNI GTAC 1 cut(s) 336
RseI CAYNNNNRTG 1 cut(s) 347
SaqAI TTAA 2 cut(s) 195, 315
Sau96I GGNCC 1 cut(s) 46
ScrFI CCNGG 3 cut(s) 50, 51, 123
SduI GDGCHC 1 cut(s) 56
SetI ASST 7 cut(s) 20, 59, 135, 139, 271, 282, 370
SinI GGWCC 1 cut(s) 46
SmaI CCCGGG 1 cut(s) 51
SmiMI CAYNNNNRTG 1 cut(s) 347
SmlI CTYRAG 1 cut(s) 105
SmoI CTYRAG 1 cut(s) 105
Sse9I AATT 3 cut(s) 196, 245, 289
SspMI CTAG 4 cut(s) 6, 134, 308, 365
StyD4I CCNGG 3 cut(s) 48, 49, 121
TaaI ACNGT 2 cut(s) 327, 335
TasI AATT 3 cut(s) 196, 245, 289
TatI WGTACW 1 cut(s) 335
TfiI GAWTC 1 cut(s) 95
Tru1I TTAA 2 cut(s) 195, 315
Tru9I TTAA 2 cut(s) 195, 315
TseFI GTSAC 1 cut(s) 250
Tsp45I GTSAC 1 cut(s) 250
TspDTI ATGAA 5 cut(s) 16, 143, 162, 336, 365
TspMI CCCGGG 1 cut(s) 49
VpaK11BI GGWCC 1 cut(s) 46
XapI RAATTY 1 cut(s) 289
XbaI TCTAGA 1 cut(s) 307
XmaI CCCGGG 1 cut(s) 49
XspI CTAG 4 cut(s) 6, 134, 308, 365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.