Rorug05G0085800

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
7377104 .. 7377367
264 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0085800.1

Sequence Viewer

Length: 264 bp
ATGCAGTGTTTGAGGTCGTCGTGGATCTGCACCTTCACCGATGTATCACCTCCGGATGACGATGAGCTCCTCAACTCGGAGCCTGCAGAGCTTGTCGACCATAAACTCCTGGCCGCCGTCGCCGTGCGATTCTGCTTCGTTTTGCTACGAAACGACGATGCGGTGTTTGAGGTCGTCGTGGATCTGCACCTTCACCGATGTATCACCGCCGTCGAGTCATCCGGAGGTGAAGGCGGTGCGCTGACCGAAAGTGTGTGTGTGTGA

Protein Analysis

87

Amino Acids

9.48

Weight (kDa)

4.31

Isoelectric Point (pI)

48.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 96
AccIII TCCGGA 2 cut(s) 52, 221
AciI CCGC 4 cut(s) 114, 161, 207, 234
AclWI GGATC 2 cut(s) 32, 189
AcoI YGGCCR 1 cut(s) 111
AfiI CCNNNNNNNGG 1 cut(s) 76
AjnI CCWGG 1 cut(s) 108
AluBI AGCT 2 cut(s) 67, 91
AluI AGCT 2 cut(s) 67, 91
Alw21I GWGCWC 1 cut(s) 69
AlwI GGATC 2 cut(s) 32, 189
Aor13HI TCCGGA 2 cut(s) 52, 221
AoxI GGCC 1 cut(s) 111
AspLEI GCGC 1 cut(s) 241
AsuHPI GGTGA 5 cut(s) 28, 39, 185, 196, 239
BaeI ACNNNNGTAYC 4 cut(s) 27, 60, 184, 217
BanII GRGCYC 1 cut(s) 69
Bbv12I GWGCWC 1 cut(s) 69
BceAI ACGGC 3 cut(s) 101, 107, 194
BciT130I CCWGG 1 cut(s) 110
BfmI CTRYAG 1 cut(s) 84
BisI GCNGC 1 cut(s) 114
BlsI GCNGC 1 cut(s) 115
Bme1390I CCNGG 1 cut(s) 110
BmiI GGNNCC 1 cut(s) 81
BmrFI CCNGG 1 cut(s) 110
BmsI GCATC 1 cut(s) 148
BsaWI WCCGGW 2 cut(s) 52, 221
Bsc4I CCNNNNNNNGG 1 cut(s) 76
BseAI TCCGGA 2 cut(s) 52, 221
BseBI CCWGG 1 cut(s) 110
BseGI GGATG 2 cut(s) 61, 218
BseLI CCNNNNNNNGG 1 cut(s) 76
BseRI GAGGAG 1 cut(s) 59
BsgI GTGCAG 2 cut(s) 13, 170
BshFI GGCC 1 cut(s) 113
BsiHKAI GWGCWC 1 cut(s) 69
BsiSI CCGG 2 cut(s) 53, 222
BslI CCNNNNNNNGG 1 cut(s) 76
BsnI GGCC 1 cut(s) 113
Bsp1286I GDGCHC 1 cut(s) 69
Bsp13I TCCGGA 2 cut(s) 52, 221
Bsp143I GATC 2 cut(s) 24, 181
BspACI CCGC 4 cut(s) 114, 161, 207, 234
BspANI GGCC 1 cut(s) 113
BspEI TCCGGA 2 cut(s) 52, 221
BspLI GGNNCC 1 cut(s) 81
BspMAI CTGCAG 1 cut(s) 88
BspPI GGATC 2 cut(s) 32, 189
BssMI GATC 2 cut(s) 24, 181
Bst2UI CCWGG 1 cut(s) 110
BstC8I GCNNGC 1 cut(s) 84
BstF5I GGATG 2 cut(s) 61, 218
BstHHI GCGC 1 cut(s) 241
BstKTI GATC 2 cut(s) 27, 184
BstMBI GATC 2 cut(s) 24, 181
BstMWI GCNNNNNNNGC 2 cut(s) 88, 119
BstNI CCWGG 1 cut(s) 110
BstSCI CCNGG 1 cut(s) 108
BstSFI CTRYAG 1 cut(s) 84
BstX2I RGATCY 2 cut(s) 24, 181
BstYI RGATCY 2 cut(s) 24, 181
BsuRI GGCC 1 cut(s) 113
BtsCI GGATG 2 cut(s) 61, 218
BtsI GCAGTG 1 cut(s) 11
BtsIMutI CAGTG 1 cut(s) 11
Cac8I GCNNGC 1 cut(s) 84
CfoI GCGC 1 cut(s) 241
CviJI RGCY 4 cut(s) 67, 82, 91, 113
CviKI_1 RGCY 4 cut(s) 67, 82, 91, 113
DpnI GATC 2 cut(s) 26, 183
DpnII GATC 2 cut(s) 24, 181
EaeI YGGCCR 1 cut(s) 111
Ecl136II GAGCTC 1 cut(s) 67
Eco24I GRGCYC 1 cut(s) 69
Eco53kI GAGCTC 1 cut(s) 67
EcoICRI GAGCTC 1 cut(s) 67
EcoRII CCWGG 1 cut(s) 108
EcoT38I GRGCYC 1 cut(s) 69
FaiI YATR 1 cut(s) 102
FblI GTMKAC 1 cut(s) 96
Fnu4HI GCNGC 1 cut(s) 114
FokI GGATG 2 cut(s) 68, 205
FriOI GRGCYC 1 cut(s) 69
Fsp4HI GCNGC 1 cut(s) 114
GlaI GCGC 1 cut(s) 240
GluI GCNGC 1 cut(s) 114
HaeIII GGCC 1 cut(s) 113
HapII CCGG 2 cut(s) 53, 222
HhaI GCGC 1 cut(s) 241
Hin6I GCGC 1 cut(s) 239
HinP1I GCGC 1 cut(s) 239
HincII GTYRAC 1 cut(s) 97
HindII GTYRAC 1 cut(s) 97
HinfI GANTC 2 cut(s) 129, 215
HpaII CCGG 2 cut(s) 53, 222
HphI GGTGA 5 cut(s) 28, 39, 185, 196, 239
Hpy166II GTNNAC 1 cut(s) 97
Hpy188I TCNGA 1 cut(s) 79
Hpy188III TCNNGA 2 cut(s) 53, 222
Hpy8I GTNNAC 1 cut(s) 97
Hpy99I CGWCG 5 cut(s) 22, 122, 158, 179, 215
HpyAV CCTTC 3 cut(s) 43, 200, 224
HpyCH4V TGCA 4 cut(s) 4, 30, 86, 187
HpyF10VI GCNNNNNNNGC 2 cut(s) 88, 119
HspAI GCGC 1 cut(s) 239
Kpn2I TCCGGA 2 cut(s) 52, 221
Kzo9I GATC 2 cut(s) 24, 181
LmnI GCTCC 2 cut(s) 72, 79
LpnPI CCDG 5 cut(s) 66, 95, 96, 122, 235
LweI GCATC 1 cut(s) 148
MalI GATC 2 cut(s) 26, 183
MboI GATC 2 cut(s) 24, 181
MflI RGATCY 2 cut(s) 24, 181
MhlI GDGCHC 1 cut(s) 69
MlyI GAGTC 1 cut(s) 224
MnlI CCTC 5 cut(s) 6, 60, 80, 163, 218
MroI TCCGGA 2 cut(s) 52, 221
MspI CCGG 2 cut(s) 53, 222
MspR9I CCNGG 1 cut(s) 110
MvaI CCWGG 1 cut(s) 110
MwoI GCNNNNNNNGC 2 cut(s) 88, 119
NdeII GATC 2 cut(s) 24, 181
NlaIV GGNNCC 1 cut(s) 81
PfeI GAWTC 1 cut(s) 129
PkrI GCNGC 1 cut(s) 115
PleI GAGTC 1 cut(s) 223
PpsI GAGTC 1 cut(s) 223
Psp124BI GAGCTC 1 cut(s) 69
Psp6I CCWGG 1 cut(s) 108
PspGI CCWGG 1 cut(s) 108
PspN4I GGNNCC 1 cut(s) 81
PstI CTGCAG 1 cut(s) 88
PsuI RGATCY 2 cut(s) 24, 181
SacI GAGCTC 1 cut(s) 69
SalI GTCGAC 1 cut(s) 95
SatI GCNGC 1 cut(s) 114
Sau3AI GATC 2 cut(s) 24, 181
SchI GAGTC 1 cut(s) 224
ScrFI CCNGG 1 cut(s) 110
SduI GDGCHC 1 cut(s) 69
SetI ASST 8 cut(s) 17, 35, 52, 69, 93, 174, 192, 229
SfaNI GCATC 1 cut(s) 148
SfcI CTRYAG 1 cut(s) 84
SsiI CCGC 4 cut(s) 114, 161, 207, 234
SstI GAGCTC 1 cut(s) 69
StyD4I CCNGG 1 cut(s) 108
TaqI TCGA 2 cut(s) 96, 213
TaqII GACCGA 1 cut(s) 260
TauI GCSGC 1 cut(s) 116
TfiI GAWTC 1 cut(s) 129
XmiI GTMKAC 1 cut(s) 96
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.