MD05G1227500.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
36151523 .. 36154406
2884 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1227500.v1.1.491

Sequence Viewer

Length: 1908 bp
ATGTACTTGTGGTCATCCATGGCAGCTACAGGTTTGACGATCAACTCAATATTCTTGATCATTTTTGCATGCTCGTGTAGTTGTCATGATGCAAGGGACACACTGAAACCAGGGGACACTCTCAATTCCTCAAGTTTGTTAGTGTCTGCATCTGGGAAGTTCAGTTTGGGTTTCTATGTGTATAACAACGGGTCGACAAACACCAGCTATCTAGCAGTCCAGGGCAGCAGCAATCAAGGTCTAAACAGAGCGTGGATTGGCAACAGAGACACACCTATTCCATACGCTTCATCCCCAGTTCCCACCGTAGACACCAATAACACTTTGAAAATTACTTACCAAGGTGGAGACCCTATTGTTCTTTACTCCCCTACCAGTAGTACTAGTTCTGTTGAGGCTACCATTTTGGATTCTGGCAATTTTGTACTACAAGAAGTGAGTTCGGTCAATGGATCAACCAACGGGGTTTTGTGGCAGAGTTTTGATCATCCTACGGACACGTTTATACCAGGCATGAAATTGGGTGTTGATCTTACAAATGGGAAAAATTGGTCTCTTTTATCTTGGGCTACAAGCTACAATCCTGCACCAGGGCTTTTCAGCCTCGATTGGGACCCAAAGGAACACGAATTGAGAATCAAGCAAGGTGGAGTGGTTTATTGGACTAGTGGGGTAAGCACAAACTGTGATGGCTATAACATGGTTGGAGGGTGCGGGAGAAGACCAAGGAATTATACGGCAAAACTTGGTGATGAGTTTGTTGACAGAAGCGGTCACTTCAACATTAGCCATTCGAGTAATACTTCAGAACCCCCCAACTGGTTTGGTACTGGTACTGAGGATTGTAAGGCCACTTGTTGGCAAAATTGTGAGTGCCTTGGTTTCGACCTTCCATATGGTAACCAGACTACTGGTGCGGGATGTCGATTTTGGCGTGTAGGCACTCAGTTCATTGATGACCCTATCGGATTCACTCCTGCAAGAAGTGGACGTAAGTGGTTATGGATTAGCATTGCTATTGCTGCTGCTCTACTGGTAATGGTGTTTTGCATCTTGACCTATCTAAGAACAACAAAAATATTTTCGGGGAAAATTGGAAACGGAAGAAGACATAGCTGTGAAGAAACTTCAAAGTGTTCCGGACAAGGAACTTCAGAGTTTAAGAATGAATTGATACTCATACATGAACTCCGACATACAAACCTTGTTAAGCTCTTCGGATTTTGCATTCATGAGGTAGAGAGGATGTTGATATATGAGTACATGCCAAACAAAAGCTTGGACCACTTTTTATATGATCCAATCAGAGGTGCGCTCCTAGATTGGAAGAAGCGTCTCAATATAATTGAAGGAATCACTCAAGGATTGCTTTACTTGCACAAATATGCGGGAACGAAAGTGATCCATAGAGATTTGAAAGCTAGTAACATACTGCTTGACAAAAATTTTAACCCCAAAATTGAGGATTTTGGGATGGCAAGGATTTTCACGCAGGAACTGGAAGCAAATACTAGTAAGATTGTCGGAACATTTGGTTATATGCCCCCCGAGTATGTCATGGCAGGACTCTTTTCTGTAAAATCTGATGTATACGGTTATGGAGTGTTAATGCTTGAAATTATAAGCGGAAGGAAAAACAACAGCTTACACAATGAAGATCGCGTGCTAAACTTAGTAGGACATGCATGGGAGCTATGGAAAGAAGGAAGAGGGATAGAGCTAATGGATCCAACCCTAGCCGAAACATGTATTAGTGATCAATTGTTAAGATGCGTCCAAATCGGTCTACTATGCGTAGAGGAAAATGCAGCCCATCGACCAACCATGTCAGAGGTGATATCCATGTTGACAAATGAAAGCATGAAGTTACCTGTACCAACAAAGCCAGCATTTTATTACACAGAGTGA

Protein Analysis

636

Amino Acids

70.56

Weight (kDa)

6.23

Isoelectric Point (pI)

35.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 85 - 189 6.7e-23 D-mannose binding lectin
Pkinase PF00069 379 - 613 7.8e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 380 - 615 3.6e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1622
AccB7I CCANNNNNTGG 1 cut(s) 858
AccI GTMKAC 4 cut(s) 194, 309, 1590, 1786
AccII CGCG 1 cut(s) 1662
AccIII TCCGGA 1 cut(s) 1139
AciI CCGC 5 cut(s) 714, 771, 917, 1388, 1626
AclWI GGATC 5 cut(s) 460, 1292, 1396, 1721, 1734
AcsI RAATTY 1 cut(s) 1444
AcuI CTGAAG 2 cut(s) 789, 1137
AdeI CACNNNGTG 1 cut(s) 1905
AfaI GTAC 7 cut(s) 5, 382, 426, 829, 835, 1262, 1875
AfiI CCNNNNNNNGG 5 cut(s) 590, 610, 819, 858, 1307
AflIII ACRYGT 2 cut(s) 498, 1745
AgsI TTSAA 6 cut(s) 328, 781, 1131, 1349, 1417, 1616
AhlI ACTAGT 3 cut(s) 383, 665, 1511
AjnI CCWGG 4 cut(s) 109, 219, 508, 589
AjuI GAANNNNNNNTTGG 2 cut(s) 149, 181
Alw26I GTCTC 4 cut(s) 261, 342, 558, 1340
AlwI GGATC 5 cut(s) 460, 1292, 1396, 1721, 1734
AlwNI CAGNNNCTG 1 cut(s) 1498
Ama87I CYCGRG 1 cut(s) 1547
Aor13HI TCCGGA 1 cut(s) 1139
AoxI GGCC 1 cut(s) 849
ApeKI GCWGC 6 cut(s) 23, 225, 228, 1022, 1025, 1808
ApoI RAATTY 1 cut(s) 1444
AspLEI GCGC 1 cut(s) 1315
AspS9I GGNCC 2 cut(s) 613, 1282
AsuHPI GGTGA 2 cut(s) 761, 1846
AvaI CYCGRG 1 cut(s) 1547
AvaII GGWCC 2 cut(s) 613, 1282
BamHI GGATCC 1 cut(s) 1726
BauI CACGAG 1 cut(s) 73
BbsI GAAGAC 2 cut(s) 727, 1114
BbvI GCAGC 6 cut(s) 35, 237, 240, 1009, 1012, 1820
BccI CCATC 3 cut(s) 683, 1468, 1821
BceAI ACGGC 1 cut(s) 753
BciT130I CCWGG 4 cut(s) 111, 221, 510, 591
BclI TGATCA 3 cut(s) 57, 484, 1756
BcoDI GTCTC 4 cut(s) 261, 342, 558, 1340
BcuI ACTAGT 3 cut(s) 383, 665, 1511
BfaI CTAG 7 cut(s) 212, 384, 666, 1319, 1422, 1512, 1736
BfmI CTRYAG 1 cut(s) 27
BisI GCNGC 6 cut(s) 24, 226, 229, 1023, 1026, 1809
BlsI GCNGC 6 cut(s) 25, 227, 230, 1024, 1027, 1810
BmcAI AGTACT 1 cut(s) 382
Bme1390I CCNGG 4 cut(s) 111, 221, 510, 591
Bme18I GGWCC 2 cut(s) 613, 1282
BmeT110I CYCGRG 1 cut(s) 1547
BmgT120I GGNCC 2 cut(s) 613, 1282
BmiI GGNNCC 3 cut(s) 614, 615, 1728
BmrFI CCNGG 4 cut(s) 111, 221, 510, 591
BmrI ACTGGG 1 cut(s) 290
BmsI GCATC 4 cut(s) 79, 158, 1059, 1760
BmuI ACTGGG 1 cut(s) 290
BpiI GAAGAC 2 cut(s) 727, 1114
BplI GAGNNNNNCTC 2 cut(s) 1299, 1331
BpuEI CTTGAG 2 cut(s) 115, 1344
BsaI GGTCTC 2 cut(s) 342, 558
BsaJI CCNNGG 7 cut(s) 18, 110, 220, 340, 590, 725, 877
BsaWI WCCGGW 1 cut(s) 1139
BsaXI ACNNNNNCTCC 2 cut(s) 1173, 1203
Bsc4I CCNNNNNNNGG 5 cut(s) 590, 610, 819, 858, 1307
Bse1I ACTGG 7 cut(s) 296, 375, 824, 835, 916, 1038, 1503
Bse3DI GCAATG 1 cut(s) 1011
BseAI TCCGGA 1 cut(s) 1139
BseBI CCWGG 4 cut(s) 111, 221, 510, 591
BseDI CCNNGG 7 cut(s) 18, 110, 220, 340, 590, 725, 877
BseGI GGATG 6 cut(s) 14, 290, 487, 926, 1251, 1479
BseLI CCNNNNNNNGG 5 cut(s) 590, 610, 819, 858, 1307
BseMI GCAATG 1 cut(s) 1011
BseMII CTCAG 2 cut(s) 828, 959
BseNI ACTGG 7 cut(s) 296, 375, 824, 835, 916, 1038, 1503
BseXI GCAGC 6 cut(s) 35, 237, 240, 1009, 1012, 1820
BsgI GTGCAG 1 cut(s) 570
Bsh1236I CGCG 1 cut(s) 1662
BshFI GGCC 1 cut(s) 851
BsiHKCI CYCGRG 1 cut(s) 1547
BsiSI CCGG 1 cut(s) 1140
BslFI GGGAC 3 cut(s) 110, 128, 626
BslI CCNNNNNNNGG 5 cut(s) 590, 610, 819, 858, 1307
BsmAI GTCTC 4 cut(s) 261, 342, 558, 1340
BsmBI CGTCTC 1 cut(s) 1340
BsmFI GGGAC 3 cut(s) 110, 128, 626
BsmI GAATGC 1 cut(s) 1227
BsnI GGCC 1 cut(s) 851
Bso31I GGTCTC 2 cut(s) 342, 558
BsoBI CYCGRG 1 cut(s) 1547
Bsp13I TCCGGA 1 cut(s) 1139
Bsp19I CCATGG 1 cut(s) 18
BspACI CCGC 5 cut(s) 714, 771, 917, 1388, 1626
BspANI GGCC 1 cut(s) 851
BspCNI CTCAG 2 cut(s) 829, 958
BspEI TCCGGA 1 cut(s) 1139
BspFNI CGCG 1 cut(s) 1662
BspHI TCATGA 2 cut(s) 85, 1231
BspLI GGNNCC 3 cut(s) 614, 615, 1728
BspPI GGATC 5 cut(s) 460, 1292, 1396, 1721, 1734
BspQI GCTCTTC 1 cut(s) 1220
BspTNI GGTCTC 2 cut(s) 342, 558
BsrDI GCAATG 1 cut(s) 1011
BsrI ACTGG 7 cut(s) 296, 375, 824, 835, 916, 1038, 1503
BssECI CCNNGG 7 cut(s) 18, 110, 220, 340, 590, 725, 877
BssNAI GTATAC 1 cut(s) 1591
BssSI CACGAG 1 cut(s) 73
BssT1I CCWWGG 4 cut(s) 18, 340, 725, 877
Bst1107I GTATAC 1 cut(s) 1591
Bst2BI CACGAG 1 cut(s) 73
Bst2UI CCWGG 4 cut(s) 111, 221, 510, 591
Bst4CI ACNGT 3 cut(s) 307, 686, 1595
Bst6I CTCTTC 2 cut(s) 1220, 1702
BstC8I GCNNGC 3 cut(s) 70, 1664, 1887
BstDEI CTNAG 4 cut(s) 837, 945, 1064, 1672
BstDSI CCRYGG 1 cut(s) 18
BstEII GGTNACC 1 cut(s) 899
BstENI CCTNNNNNAGG 1 cut(s) 588
BstF5I GGATG 6 cut(s) 14, 290, 487, 926, 1251, 1479
BstFNI CGCG 1 cut(s) 1662
BstHHI GCGC 1 cut(s) 1315
BstMAI GTCTC 4 cut(s) 261, 342, 558, 1340
BstMWI GCNNNNNNNGC 2 cut(s) 1022, 1375
BstNI CCWGG 4 cut(s) 111, 221, 510, 591
BstNSI RCATGY 4 cut(s) 72, 1267, 1685, 1749
BstPI GGTNACC 1 cut(s) 899
BstSCI CCNGG 4 cut(s) 109, 219, 508, 589
BstSFI CTRYAG 1 cut(s) 27
BstUI CGCG 1 cut(s) 1662
BstV1I GCAGC 6 cut(s) 35, 237, 240, 1009, 1012, 1820
BstV2I GAAGAC 2 cut(s) 727, 1114
BstX2I RGATCY 1 cut(s) 1726
BstXI CCANNNNNNTGG 1 cut(s) 911
BstYI RGATCY 1 cut(s) 1726
BstZ17I GTATAC 1 cut(s) 1591
BsuRI GGCC 1 cut(s) 851
BtgI CCRYGG 1 cut(s) 18
BtsCI GGATG 6 cut(s) 14, 290, 487, 926, 1251, 1479
BtsIMutI CAGTG 1 cut(s) 101
Cac8I GCNNGC 3 cut(s) 70, 1664, 1887
CaiI CAGNNNCTG 1 cut(s) 1498
CciI TCATGA 2 cut(s) 85, 1231
CfoI GCGC 1 cut(s) 1315
Cfr13I GGNCC 2 cut(s) 613, 1282
CseI GACGC 2 cut(s) 1322, 1762
Csp6I GTAC 7 cut(s) 4, 381, 425, 828, 834, 1261, 1874
CspCI CAANNNNNGTGG 2 cut(s) 628, 663
CviQI GTAC 7 cut(s) 4, 381, 425, 828, 834, 1261, 1874
DdeI CTNAG 4 cut(s) 837, 945, 1064, 1672
DraIII CACNNNGTG 1 cut(s) 1905
Eam1104I CTCTTC 2 cut(s) 1220, 1702
EarI CTCTTC 2 cut(s) 1220, 1702
Eco130I CCWWGG 4 cut(s) 18, 340, 725, 877
Eco31I GGTCTC 2 cut(s) 342, 558
Eco32I GATATC 1 cut(s) 1839
Eco47I GGWCC 2 cut(s) 613, 1282
Eco57I CTGAAG 2 cut(s) 789, 1137
Eco88I CYCGRG 1 cut(s) 1547
Eco91I GGTNACC 1 cut(s) 899
EcoNI CCTNNNNNAGG 1 cut(s) 588
EcoO109I RGGNCCY 1 cut(s) 613
EcoO65I GGTNACC 1 cut(s) 899
EcoRII CCWGG 4 cut(s) 109, 219, 508, 589
EcoRV GATATC 1 cut(s) 1839
EcoT14I CCWWGG 4 cut(s) 18, 340, 725, 877
EcoT22I ATGCAT 1 cut(s) 1687
ErhI CCWWGG 4 cut(s) 18, 340, 725, 877
Esp3I CGTCTC 1 cut(s) 1340
FalI AAGNNNNNCTT 2 cut(s) 1353, 1385
FaqI GGGAC 3 cut(s) 110, 128, 626
FauI CCCGC 3 cut(s) 707, 910, 1381
FauNDI CATATG 1 cut(s) 895
FbaI TGATCA 3 cut(s) 57, 484, 1756
FblI GTMKAC 4 cut(s) 194, 309, 1590, 1786
Fnu4HI GCNGC 6 cut(s) 24, 226, 229, 1023, 1026, 1809
FokI GGATG 5 cut(s) 277, 474, 933, 1258, 1486
Fsp4HI GCNGC 6 cut(s) 24, 226, 229, 1023, 1026, 1809
FspBI CTAG 7 cut(s) 212, 384, 666, 1319, 1422, 1512, 1736
GlaI GCGC 1 cut(s) 1314
GluI GCNGC 6 cut(s) 24, 226, 229, 1023, 1026, 1809
HaeIII GGCC 1 cut(s) 851
HapII CCGG 1 cut(s) 1140
HgaI GACGC 2 cut(s) 1322, 1762
HhaI GCGC 1 cut(s) 1315
Hin6I GCGC 1 cut(s) 1313
HinP1I GCGC 1 cut(s) 1313
HincII GTYRAC 3 cut(s) 195, 763, 1848
HindII GTYRAC 3 cut(s) 195, 763, 1848
HindIII AAGCTT 1 cut(s) 1276
HinfI GANTC 5 cut(s) 410, 636, 969, 1353, 1566
HpaII CCGG 1 cut(s) 1140
HphI GGTGA 2 cut(s) 761, 1846
Hpy166II GTNNAC 7 cut(s) 195, 310, 763, 989, 1591, 1787, 1848
Hpy188I TCNGA 9 cut(s) 808, 968, 1156, 1193, 1220, 1307, 1526, 1585, 1831
Hpy188III TCNNGA 5 cut(s) 55, 86, 1054, 1140, 1232
Hpy8I GTNNAC 7 cut(s) 195, 310, 763, 989, 1591, 1787, 1848
HpyAV CCTTC 4 cut(s) 899, 1343, 1623, 1697
HpyCH4III ACNGT 3 cut(s) 307, 686, 1595
HpyCH4IV ACGT 2 cut(s) 500, 991
HpyF10VI GCNNNNNNNGC 2 cut(s) 1022, 1375
HpyF3I CTNAG 4 cut(s) 837, 945, 1064, 1672
HpySE526I ACGT 2 cut(s) 500, 991
HspAI GCGC 1 cut(s) 1313
KflI GGGWCCC 1 cut(s) 613
Kpn2I TCCGGA 1 cut(s) 1139
Ksp22I TGATCA 3 cut(s) 57, 484, 1756
LguI GCTCTTC 1 cut(s) 1220
LmnI GCTCC 2 cut(s) 1320, 1690
Lsp1109I GCAGC 6 cut(s) 35, 237, 240, 1009, 1012, 1820
LweI GCATC 4 cut(s) 79, 158, 1059, 1760
MaeI CTAG 7 cut(s) 212, 384, 666, 1319, 1422, 1512, 1736
MaeII ACGT 2 cut(s) 500, 991
MaeIII GTNAC 4 cut(s) 773, 899, 1424, 1866
MboII GAAGA 8 cut(s) 732, 1116, 1119, 1133, 1207, 1339, 1667, 1719
MfeI CAATTG 1 cut(s) 1760
MflI RGATCY 1 cut(s) 1726
MlyI GAGTC 1 cut(s) 1560
MmeI TCCRAC 4 cut(s) 685, 1216, 1504, 1754
Mph1103I ATGCAT 1 cut(s) 1687
MroI TCCGGA 1 cut(s) 1139
MseI TTAA 5 cut(s) 1161, 1209, 1449, 1607, 1766
MslI CAYNNNNRTG 3 cut(s) 73, 1116, 1383
MspI CCGG 1 cut(s) 1140
MspR9I CCNGG 4 cut(s) 111, 221, 510, 591
MunI CAATTG 1 cut(s) 1760
Mva1269I GAATGC 1 cut(s) 1227
MvaI CCWGG 4 cut(s) 111, 221, 510, 591
MvnI CGCG 1 cut(s) 1662
MwoI GCNNNNNNNGC 2 cut(s) 1022, 1375
NcoI CCATGG 1 cut(s) 18
NdeI CATATG 1 cut(s) 895
NlaIV GGNNCC 3 cut(s) 614, 615, 1728
NmuCI GTSAC 1 cut(s) 773
NsiI ATGCAT 1 cut(s) 1687
NspI RCATGY 4 cut(s) 72, 1267, 1685, 1749
PaeI GCATGC 1 cut(s) 72
PagI TCATGA 2 cut(s) 85, 1231
PciI ACATGT 1 cut(s) 1745
PciSI GCTCTTC 1 cut(s) 1220
PcsI WCGNNNNNNNCGW 1 cut(s) 931
PctI GAATGC 1 cut(s) 1227
PfeI GAWTC 4 cut(s) 410, 636, 969, 1353
PflMI CCANNNNNTGG 1 cut(s) 858
PkrI GCNGC 6 cut(s) 25, 227, 230, 1024, 1027, 1810
PleI GAGTC 1 cut(s) 1560
PpsI GAGTC 1 cut(s) 1560
PpuMI RGGWCCY 1 cut(s) 613
PscI ACATGT 1 cut(s) 1745
PsiI TTATAA 1 cut(s) 1622
Psp5II RGGWCCY 1 cut(s) 613
Psp6I CCWGG 4 cut(s) 109, 219, 508, 589
PspEI GGTNACC 1 cut(s) 899
PspGI CCWGG 4 cut(s) 109, 219, 508, 589
PspN4I GGNNCC 3 cut(s) 614, 615, 1728
PspPI GGNCC 2 cut(s) 613, 1282
PspPPI RGGWCCY 1 cut(s) 613
PsrI GAACNNNNNNTAC 2 cut(s) 370, 402
PstNI CAGNNNCTG 1 cut(s) 1498
PsuI RGATCY 1 cut(s) 1726
RsaI GTAC 7 cut(s) 5, 382, 426, 829, 835, 1262, 1875
RsaNI GTAC 7 cut(s) 4, 381, 425, 828, 834, 1261, 1874
RseI CAYNNNNRTG 3 cut(s) 73, 1116, 1383
SalI GTCGAC 1 cut(s) 193
SapI GCTCTTC 1 cut(s) 1220
SaqAI TTAA 5 cut(s) 1161, 1209, 1449, 1607, 1766
SatI GCNGC 6 cut(s) 24, 226, 229, 1023, 1026, 1809
Sau96I GGNCC 2 cut(s) 613, 1282
ScaI AGTACT 1 cut(s) 382
SchI GAGTC 1 cut(s) 1560
ScrFI CCNGG 4 cut(s) 111, 221, 510, 591
SfaNI GCATC 4 cut(s) 79, 158, 1059, 1760
SfcI CTRYAG 1 cut(s) 27
SinI GGWCC 2 cut(s) 613, 1282
SmiMI CAYNNNNRTG 3 cut(s) 73, 1116, 1383
SmlI CTYRAG 2 cut(s) 130, 1359
SmoI CTYRAG 2 cut(s) 130, 1359
SpeI ACTAGT 3 cut(s) 383, 665, 1511
SphI GCATGC 1 cut(s) 72
SsiI CCGC 5 cut(s) 714, 771, 917, 1388, 1626
SspI AATATT 2 cut(s) 51, 1080
SspMI CTAG 7 cut(s) 212, 384, 666, 1319, 1422, 1512, 1736
StyD4I CCNGG 4 cut(s) 109, 219, 508, 589
StyI CCWWGG 4 cut(s) 18, 340, 725, 877
TaaI ACNGT 3 cut(s) 307, 686, 1595
TaiI ACGT 2 cut(s) 503, 994
TaqI TCGA 6 cut(s) 194, 606, 794, 885, 925, 1816
TaqII GACCGA 2 cut(s) 433, 1772
TatI WGTACW 4 cut(s) 3, 380, 424, 1260
TfiI GAWTC 4 cut(s) 410, 636, 969, 1353
Tru1I TTAA 5 cut(s) 1161, 1209, 1449, 1607, 1766
Tru9I TTAA 5 cut(s) 1161, 1209, 1449, 1607, 1766
TscAI CASTG 1 cut(s) 108
TseFI GTSAC 1 cut(s) 773
TseI GCWGC 6 cut(s) 23, 225, 228, 1022, 1025, 1808
Tsp45I GTSAC 1 cut(s) 773
TspDTI ATGAA 9 cut(s) 279, 530, 940, 1182, 1200, 1220, 1668, 1869, 1877
TspGWI ACGGA 2 cut(s) 509, 1116
TspRI CASTG 1 cut(s) 108
Van91I CCANNNNNTGG 1 cut(s) 858
VpaK11BI GGWCC 2 cut(s) 613, 1282
XagI CCTNNNNNAGG 1 cut(s) 588
XapI RAATTY 1 cut(s) 1444
XceI RCATGY 4 cut(s) 72, 1267, 1685, 1749
XmiI GTMKAC 4 cut(s) 194, 309, 1590, 1786
XspI CTAG 7 cut(s) 212, 384, 666, 1319, 1422, 1512, 1736
ZrmI AGTACT 1 cut(s) 382
Zsp2I ATGCAT 1 cut(s) 1687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.