RLG00000032848

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
19884161 .. 19884866
706 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032848

Sequence Viewer

Length: 525 bp
ATGGCAAGGATTTTCACGAATGATGAACAAGAAGCAAATACTATGAAGATTGCTGGGACACGTGGTTATATGTCCCCTGAGTATATTATGGGGGGAAAGTTTTCCATAAAATTTGATGTCTATAGTTTCAGTGTGTTGATGCTTGAAATCCTAAGTGGTAGAAGAAGCAACAGTTTCTACAATGATGATCGCGCCCTCAATTTAGTTGGCTATGCATTGGCATTATGGAAAGAAGGTGCAAGACTAGAACTAATGGATCCAACACTTGGTGATTCATGTGATAAAGATCATTTCTTGAGGTGCATCCATGTTGGTTTGCTCTGCGTAGAGGAAAATGCAGCCAGCCGACCAAAGATGTTAGATGTGATATCTATGCTGACTAATGAAAGCATGTCATTGCCGATACCTACAAAACCAGCATTTTGTACAGAAAGAAATGTCATCACAACTACTATAGGTGGAAACGAACCGGAAGTGGTGGTATCTGTAAATGGCATCTCCAATTCTGATTTTGATGGACGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

175

Amino Acids

19.32

Weight (kDa)

4.95

Isoelectric Point (pI)

48.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 2 - 64 1.8e-07 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 5 - 56 8e-07 Protein kinase domain
DUF3403 PF11883 128 - 174 6e-06 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 266
AccII CGCG 1 cut(s) 192
AclWI GGATC 2 cut(s) 251, 264
AcsI RAATTY 1 cut(s) 110
AcvI CACGTG 1 cut(s) 62
AdeI CACNNNGTG 1 cut(s) 269
AfaI GTAC 1 cut(s) 427
AfiI CCNNNNNNNGG 1 cut(s) 266
AflIII ACRYGT 1 cut(s) 59
AgsI TTSAA 1 cut(s) 146
AlwI GGATC 2 cut(s) 251, 264
ApeKI GCWGC 1 cut(s) 338
ApoI RAATTY 1 cut(s) 110
Asp700I GAANNNNTTC 1 cut(s) 100
AspLEI GCGC 1 cut(s) 194
AsuHPI GGTGA 1 cut(s) 281
BamHI GGATCC 1 cut(s) 256
BbrPI CACGTG 1 cut(s) 62
BbvI GCAGC 1 cut(s) 350
BccI CCATC 1 cut(s) 509
BfaI CTAG 1 cut(s) 245
BfmI CTRYAG 2 cut(s) 121, 453
BisI GCNGC 1 cut(s) 339
BlsI GCNGC 1 cut(s) 340
BmiI GGNNCC 1 cut(s) 258
BmsI GCATC 3 cut(s) 129, 312, 504
BpuEI CTTGAG 1 cut(s) 316
BsaAI YACGTR 1 cut(s) 62
BsaBI GATNNNNATC 1 cut(s) 285
BsaWI WCCGGW 1 cut(s) 469
Bsc4I CCNNNNNNNGG 1 cut(s) 266
Bse3DI GCAATG 1 cut(s) 395
Bse8I GATNNNNATC 1 cut(s) 285
BseGI GGATG 1 cut(s) 303
BseJI GATNNNNATC 1 cut(s) 285
BseLI CCNNNNNNNGG 1 cut(s) 266
BseMI GCAATG 1 cut(s) 395
BseMII CTCAG 1 cut(s) 69
BseXI GCAGC 1 cut(s) 350
BseYI CCCAGC 1 cut(s) 53
Bsh1236I CGCG 1 cut(s) 192
BsiSI CCGG 1 cut(s) 470
BslFI GGGAC 2 cut(s) 58, 70
BslI CCNNNNNNNGG 1 cut(s) 266
BsmFI GGGAC 2 cut(s) 58, 70
Bsp1407I TGTACA 1 cut(s) 425
Bsp143I GATC 3 cut(s) 187, 256, 286
BspCNI CTCAG 1 cut(s) 70
BspFNI CGCG 1 cut(s) 192
BspLI GGNNCC 1 cut(s) 258
BspPI GGATC 2 cut(s) 251, 264
BsrDI GCAATG 1 cut(s) 395
BsrGI TGTACA 1 cut(s) 425
BssMI GATC 3 cut(s) 187, 256, 286
Bst4CI ACNGT 1 cut(s) 173
BstAUI TGTACA 1 cut(s) 425
BstBAI YACGTR 1 cut(s) 62
BstC8I GCNNGC 1 cut(s) 343
BstDEI CTNAG 2 cut(s) 78, 152
BstF5I GGATG 1 cut(s) 303
BstFNI CGCG 1 cut(s) 192
BstHHI GCGC 1 cut(s) 194
BstKTI GATC 3 cut(s) 190, 259, 289
BstMBI GATC 3 cut(s) 187, 256, 286
BstNSI RCATGY 1 cut(s) 394
BstSFI CTRYAG 2 cut(s) 121, 453
BstUI CGCG 1 cut(s) 192
BstV1I GCAGC 1 cut(s) 350
BstX2I RGATCY 1 cut(s) 256
BstYI RGATCY 1 cut(s) 256
BtsCI GGATG 1 cut(s) 303
BtsIMutI CAGTG 1 cut(s) 136
Cac8I GCNNGC 1 cut(s) 343
CfoI GCGC 1 cut(s) 194
Csp6I GTAC 1 cut(s) 426
CviAII CATG 3 cut(s) 276, 308, 391
CviJI RGCY 3 cut(s) 210, 341, 345
CviKI_1 RGCY 3 cut(s) 210, 341, 345
CviQI GTAC 1 cut(s) 426
DdeI CTNAG 2 cut(s) 78, 152
DpnI GATC 3 cut(s) 189, 258, 288
DpnII GATC 3 cut(s) 187, 256, 286
DraIII CACNNNGTG 1 cut(s) 269
Eco32I GATATC 1 cut(s) 369
Eco72I CACGTG 1 cut(s) 62
EcoRV GATATC 1 cut(s) 369
EcoT22I ATGCAT 1 cut(s) 217
FaeI CATG 3 cut(s) 279, 311, 394
FaqI GGGAC 2 cut(s) 58, 70
FatI CATG 3 cut(s) 275, 307, 390
Fnu4HI GCNGC 1 cut(s) 339
FokI GGATG 1 cut(s) 290
Fsp4HI GCNGC 1 cut(s) 339
FspBI CTAG 1 cut(s) 245
GlaI GCGC 1 cut(s) 193
GluI GCNGC 1 cut(s) 339
GsaI CCCAGC 1 cut(s) 57
HapII CCGG 1 cut(s) 470
HhaI GCGC 1 cut(s) 194
Hin1II CATG 3 cut(s) 279, 311, 394
Hin6I GCGC 1 cut(s) 192
HinP1I GCGC 1 cut(s) 192
HinfI GANTC 1 cut(s) 272
HpaII CCGG 1 cut(s) 470
HphI GGTGA 1 cut(s) 281
Hpy188I TCNGA 1 cut(s) 508
Hpy188III TCNNGA 2 cut(s) 16, 295
HpyAV CCTTC 1 cut(s) 227
HpyCH4III ACNGT 1 cut(s) 173
HpyCH4IV ACGT 2 cut(s) 61, 520
HpyCH4V TGCA 4 cut(s) 215, 239, 303, 338
HpyF3I CTNAG 2 cut(s) 78, 152
HpySE526I ACGT 2 cut(s) 61, 520
Hsp92II CATG 3 cut(s) 279, 311, 394
HspAI GCGC 1 cut(s) 192
Kzo9I GATC 3 cut(s) 187, 256, 286
LpnPI CCDG 5 cut(s) 39, 90, 355, 429, 483
Lsp1109I GCAGC 1 cut(s) 350
LweI GCATC 3 cut(s) 129, 312, 504
MaeI CTAG 1 cut(s) 245
MaeII ACGT 2 cut(s) 61, 520
MalI GATC 3 cut(s) 189, 258, 288
MboI GATC 3 cut(s) 187, 256, 286
MboII GAAGA 2 cut(s) 58, 174
MflI RGATCY 1 cut(s) 256
MluCI AATT 3 cut(s) 110, 199, 502
MmeI TCCRAC 1 cut(s) 284
MnlI CCTC 3 cut(s) 206, 291, 322
Mph1103I ATGCAT 1 cut(s) 217
MroXI GAANNNNTTC 1 cut(s) 100
MseI TTAA 1 cut(s) 523
MspI CCGG 1 cut(s) 470
MvnI CGCG 1 cut(s) 192
NdeII GATC 3 cut(s) 187, 256, 286
NlaIII CATG 3 cut(s) 279, 311, 394
NlaIV GGNNCC 1 cut(s) 258
NsiI ATGCAT 1 cut(s) 217
NspI RCATGY 1 cut(s) 394
PdmI GAANNNNTTC 1 cut(s) 100
PfeI GAWTC 1 cut(s) 272
PflMI CCANNNNNTGG 1 cut(s) 266
PkrI GCNGC 1 cut(s) 340
PmaCI CACGTG 1 cut(s) 62
PmlI CACGTG 1 cut(s) 62
Ppu21I YACGTR 1 cut(s) 62
PspCI CACGTG 1 cut(s) 62
PspFI CCCAGC 1 cut(s) 53
PspN4I GGNNCC 1 cut(s) 258
PsuI RGATCY 1 cut(s) 256
RsaI GTAC 1 cut(s) 427
RsaNI GTAC 1 cut(s) 426
SaqAI TTAA 1 cut(s) 523
SatI GCNGC 1 cut(s) 339
Sau3AI GATC 3 cut(s) 187, 256, 286
SetI ASST 6 cut(s) 64, 238, 302, 409, 460, 523
SfaNI GCATC 3 cut(s) 129, 312, 504
SfcI CTRYAG 2 cut(s) 121, 453
SmlI CTYRAG 1 cut(s) 295
SmoI CTYRAG 1 cut(s) 295
Sse9I AATT 3 cut(s) 110, 199, 502
SspMI CTAG 1 cut(s) 245
TaaI ACNGT 1 cut(s) 173
TaiI ACGT 2 cut(s) 64, 523
TasI AATT 3 cut(s) 110, 199, 502
TatI WGTACW 1 cut(s) 425
TfiI GAWTC 1 cut(s) 272
Tru1I TTAA 1 cut(s) 523
Tru9I TTAA 1 cut(s) 523
TscAI CASTG 1 cut(s) 136
TseI GCWGC 1 cut(s) 338
TspDTI ATGAA 4 cut(s) 39, 59, 264, 399
TspRI CASTG 1 cut(s) 136
Van91I CCANNNNNTGG 1 cut(s) 266
XapI RAATTY 1 cut(s) 110
XceI RCATGY 1 cut(s) 394
XmnI GAANNNNTTC 1 cut(s) 100
XspI CTAG 1 cut(s) 245
Zsp2I ATGCAT 1 cut(s) 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.