MD05G1227600.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
36159853 .. 36163901
4049 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1227600.v1.1.491

Sequence Viewer

Length: 2337 bp
ATGGCTACAGGTTCACTGATCAAGTACGCAATTATCTTGGTTTGTTTTGCATCCTTGTGGACTTGTCATGATGCAATAGACACGCTGAAACCAGGGGACACTCTCAACTCCACAAGTTCTCTACTTTCGGCATCTGGGACTTTCACTTTGAATTTCATTGAAAAGGTTATCGGTGGTTCCGATAACAGCTTCATTGCCATCCTCCGTGTTAAAAGCGGTGCAAACAAAGCATGGATTGCCAACCGAGACACACCTATTTTATCCTCTTCATCTCCACTTCTTACCTTGGACTCCAATAACACATTGAAAATTACTCATCAAAATGGAGACCCTTTCGTTCTTTTCTCCGCTCCCCAAACTAATGACCCTAATACTAGTGTCGCGGCTACCCTTTTGGATTCCGGCAATTTTGTCCTACAAGAGGTCAATTCTGTTAGCGGATCAACGATCCGTGTTTTCTGGCAAAGCTTTGATCATCCAGTAGACACATTCTTACCAGGCATGAAATTGGGCATTGACCGTAGAAATGGGTACAATTGGTCACTTTTGTCATGGGGAACTCGTGACAACCCTGTGTCGTCAGGGCCTTACAGCCTTGAATGGGACACCGATGCACACCAATTGAAGATCAAGCGAAGCGGGACTGTTTATTGGACTAGTGGCGTGTTTGCAGATGGCAGATTCGAATTTATTTTGCCTGATGTATCCAAAAAAAGGTACAATTTTAGCATTGTTTCGAATCAAGACGAAGACTACCTCACGTATGCTAGTCTAGACGATCCTACTGATCCTGAGCCAGAATGGGTGCTATACACCAGGGGGGCACTTTATGAGTACGGTGCATCAGTTGACATCATACAAGCACAGAACTGTGACGGCTATAACATAGTCGGAGGGTGCGTGAGAAGGGACCGGTGTATTGGGGAAGTTGGTGATGATTTTCAGCAGAAAAAGGGTTACTTCAATATCGTTAACTCTAGCGCTTCGAGACCCCCCAACTGGCCTGGTACTGGTAGTGAGGATTGTAAGGTTACTTGTTGGCAAAATTGTGACTGCCTTGGATTCGACTTTCCATCTGGTAGTCCGACTACTGGTGCAGGATGCCGATTTTGGAGCGTGGACTGTGAATTCCTTGAAGACTTCACTGCAAATACTAGTTTTGTTTTGCCAGCAACGCAACCACACCCACCAGATTCACCACCTCCGGGAAAGAATCATGCAACACAGAAGTGGTTCTGGATTGGTATTTCCATTGCTGCTGCTTTACTGGTAATGGGGTTTTGCATCTTGGGCTATCGCCTGAGAAGAACGGGATTTATGGTTTTAGCAGGCGAGAAGGCGACAAAGATTCAAAGACGATTGGGTAGATTCATCAAAGCTACGAGACCTACCGATCAGGCAATTATACTAAACCCTGATTTGCATGCATTTACCCATGAATCGGTCTTGGCTGCCACAAGCAACTTCTCTGAAGCAAACAAGCTCGGACAAGGAGGCTTTGGAACAGTTTATAAGGGAAAATTGGCGACGGGACAAGAAGTAGCCGTGAAGAGGCTTTCAAAGTTTTCTGGACAAGGCACAGATGAGTTTAAGAATGAATTAATACTCATCTATCAACTCCAACATACAAACCTTGTTCAGCTCTTTGGATTTTGCATTCACGAAGAGGAGAGGATGCTGATATACGAGTACATGCCCAACAAAAGCTTGGACTACTTTTTATTTGATTCCACCAGAGATCGGCAACTAGATTGGAAAGAGCGCTTCACCATAATTGAAGGAATCACTCAAGGAATGGTTTACTTGCACAAATACTCGAGGAAGACAGTGATTCATAGAGATTTGAAAGCCGGTAATATACTACTTGACCAAAATATGAACCCCAAAATTTCAGATTTTGGTATGGCAAAGATTTTCACGGAGGATCTGGGAGCTAATACTATGAGGATTGCTGGGACACGTGGTTATATGCCCCCCGAGTACGTCATGGGAGGAAACTTCTCTGTAAAATCTGATGTCTACAGCTACGGAGTGTTACTGCTTGAAATTATAAGCGGCAGGAAAAACAATAGCTTGTACAATGAAGATCGTGCGCTCAACTTAGTAGGACATGCATGGGAGTTATGGAGAGCAGGTAGAGGGGAAGAACTACGGGACCCAACACTAGTCGAAACATCCATTAGAGGTCAATTGTTAAGATGTATCCAAGTCGGTCTACTATGCGTGGAGGAAAACGCAGCCCATCGGCCGTACATGTCAGAGGTGATACAAATGTTAACAAATCAAAGCATGGAGTTACGTGAACCAAAAAAACCAGCATTTTATTACACAGATTGA

Protein Analysis

779

Amino Acids

86.99

Weight (kDa)

5.94

Isoelectric Point (pI)

32.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 78 - 185 9.8e-26 D-mannose binding lectin
Pkinase PF00069 490 - 691 2.8e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 492 - 757 8.9e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1512, 2051
Acc36I ACCTGC 1 cut(s) 2123
AccBSI CCGCTC 1 cut(s) 350
AccI GTMKAC 3 cut(s) 483, 2019, 2215
AccII CGCG 1 cut(s) 383
AciI CCGC 6 cut(s) 216, 348, 383, 438, 639, 2055
AclWI GGATC 5 cut(s) 442, 448, 773, 782, 1932
AcoI YGGCCR 1 cut(s) 2246
AcsI RAATTY 4 cut(s) 151, 686, 1127, 1887
AcuI CTGAAG 1 cut(s) 1491
AcvI CACGTG 1 cut(s) 1961
AfaI GTAC 9 cut(s) 26, 533, 719, 836, 1009, 1691, 1982, 2078, 2252
AfeI AGCGCT 2 cut(s) 982, 1763
AflIII ACRYGT 2 cut(s) 1958, 2253
AgeI ACCGGT 1 cut(s) 912
AhlI ACTAGT 4 cut(s) 374, 656, 1154, 2164
AjnI CCWGG 4 cut(s) 91, 496, 815, 1003
AleI CACNNNNGTG 1 cut(s) 1228
AluBI AGCT 9 cut(s) 189, 468, 1379, 1483, 1642, 1707, 1934, 2025, 2073
AluI AGCT 9 cut(s) 189, 468, 1379, 1483, 1642, 1707, 1934, 2025, 2073
Alw26I GTCTC 4 cut(s) 240, 321, 982, 1378
AlwI GGATC 5 cut(s) 442, 448, 773, 782, 1932
Ama87I CYCGRG 2 cut(s) 1816, 1976
Aor51HI AGCGCT 2 cut(s) 982, 1763
AoxI GGCC 3 cut(s) 584, 1001, 2246
ApeKI GCWGC 4 cut(s) 1256, 1259, 1451, 2237
ApoI RAATTY 4 cut(s) 151, 686, 1127, 1887
ArsI GACNNNNNNTTYG 2 cut(s) 130, 162
AseI ATTAAT 1 cut(s) 1601
AsiGI ACCGGT 1 cut(s) 912
Asp700I GAANNNNTTC 1 cut(s) 1232
AspLEI GCGC 3 cut(s) 983, 1764, 2095
AspS9I GGNCC 3 cut(s) 584, 910, 2155
AsuC2I CCSGG 1 cut(s) 1206
AsuHPI GGTGA 4 cut(s) 944, 1188, 1759, 2275
AsuII TTCGAA 2 cut(s) 684, 737
AvaI CYCGRG 2 cut(s) 1816, 1976
AvaII GGWCC 2 cut(s) 910, 2155
BaeGI GKGCMC 1 cut(s) 826
BaeI ACNNNNGTAYC 2 cut(s) 2258, 2291
BauI CACGAG 1 cut(s) 561
BbrPI CACGTG 1 cut(s) 1961
BbsI GAAGAC 3 cut(s) 756, 1143, 1829
BbvI GCAGC 4 cut(s) 1243, 1246, 1438, 2249
BccI CCATC 4 cut(s) 206, 668, 1081, 2250
BceAI ACGGC 3 cut(s) 892, 1529, 2233
BciT130I CCWGG 4 cut(s) 93, 498, 817, 1005
BciVI GTATCC 2 cut(s) 715, 2213
BclI TGATCA 2 cut(s) 18, 472
BcnI CCSGG 1 cut(s) 1206
BcoDI GTCTC 4 cut(s) 240, 321, 982, 1378
BcuI ACTAGT 4 cut(s) 374, 656, 1154, 2164
BfaI CTAG 8 cut(s) 375, 657, 768, 773, 978, 1155, 1748, 2165
BfmI CTRYAG 2 cut(s) 6, 2020
BfoI RGCGCY 2 cut(s) 984, 1765
BfuAI ACCTGC 1 cut(s) 2123
BfuI GTATCC 2 cut(s) 715, 2213
BisI GCNGC 6 cut(s) 384, 1257, 1260, 1452, 2056, 2238
BlsI GCNGC 6 cut(s) 385, 1258, 1261, 1453, 2057, 2239
Bme1390I CCNGG 5 cut(s) 93, 498, 817, 1005, 1206
Bme18I GGWCC 2 cut(s) 910, 2155
BmeT110I CYCGRG 2 cut(s) 1816, 1976
BmgT120I GGNCC 3 cut(s) 584, 910, 2155
BmiI GGNNCC 4 cut(s) 178, 911, 2156, 2157
BmrFI CCNGG 5 cut(s) 93, 498, 817, 1005, 1206
BmsI GCATC 8 cut(s) 59, 61, 140, 601, 851, 1091, 1293, 1665
BpiI GAAGAC 3 cut(s) 756, 1143, 1829
Bpu10I CCTNAGC 1 cut(s) 792
Bpu14I TTCGAA 2 cut(s) 684, 737
BpuEI CTTGAG 1 cut(s) 1773
BpuMI CCSGG 1 cut(s) 1206
BsaAI YACGTR 3 cut(s) 762, 1961, 2300
BsaI GGTCTC 3 cut(s) 321, 982, 1378
BsaJI CCNNGG 4 cut(s) 92, 285, 816, 1057
BsaWI WCCGGW 1 cut(s) 912
BsaXI ACNNNNNCTCC 4 cut(s) 885, 915, 2119, 2149
Bse118I RCCGGY 2 cut(s) 912, 1850
Bse1I ACTGG 5 cut(s) 479, 1004, 1015, 1096, 1272
Bse3DI GCAATG 2 cut(s) 192, 1251
BseBI CCWGG 4 cut(s) 93, 498, 817, 1005
BseDI CCNNGG 4 cut(s) 92, 285, 816, 1057
BseGI GGATG 6 cut(s) 50, 198, 475, 1106, 1680, 2174
BseMI GCAATG 2 cut(s) 192, 1251
BseMII CTCAG 2 cut(s) 783, 1292
BseNI ACTGG 5 cut(s) 479, 1004, 1015, 1096, 1272
BseRI GAGGAG 1 cut(s) 1682
BseSI GKGCMC 1 cut(s) 826
BseX3I CGGCCG 1 cut(s) 2246
BseXI GCAGC 4 cut(s) 1243, 1246, 1438, 2249
BseYI CCCAGC 1 cut(s) 1952
BsgI GTGCAG 1 cut(s) 1116
Bsh1236I CGCG 1 cut(s) 383
Bsh1285I CGRYCG 1 cut(s) 2249
BshFI GGCC 3 cut(s) 586, 1003, 2248
BshTI ACCGGT 1 cut(s) 912
BsiEI CGRYCG 1 cut(s) 2249
BsiHKCI CYCGRG 2 cut(s) 1816, 1976
BsiSI CCGG 4 cut(s) 402, 913, 1205, 1851
BslFI GGGAC 8 cut(s) 110, 151, 617, 655, 923, 1545, 1969, 2168
BsmAI GTCTC 4 cut(s) 240, 321, 982, 1378
BsmFI GGGAC 8 cut(s) 110, 151, 617, 655, 923, 1545, 1969, 2168
BsmI GAATGC 1 cut(s) 1656
BsnI GGCC 3 cut(s) 586, 1003, 2248
Bso31I GGTCTC 3 cut(s) 321, 982, 1378
BsoBI CYCGRG 2 cut(s) 1816, 1976
Bsp119I TTCGAA 2 cut(s) 684, 737
Bsp1286I GDGCHC 1 cut(s) 826
Bsp1407I TGTACA 1 cut(s) 2076
BspACI CCGC 6 cut(s) 216, 348, 383, 438, 639, 2055
BspANI GGCC 3 cut(s) 586, 1003, 2248
BspCNI CTCAG 2 cut(s) 784, 1293
BspFNI CGCG 1 cut(s) 383
BspHI TCATGA 1 cut(s) 67
BspLI GGNNCC 4 cut(s) 178, 911, 2156, 2157
BspMI ACCTGC 1 cut(s) 2123
BspPI GGATC 5 cut(s) 442, 448, 773, 782, 1932
BspT104I TTCGAA 2 cut(s) 684, 737
BspTNI GGTCTC 3 cut(s) 321, 982, 1378
BsrBI CCGCTC 1 cut(s) 350
BsrDI GCAATG 2 cut(s) 192, 1251
BsrFI RCCGGY 2 cut(s) 912, 1850
BsrGI TGTACA 1 cut(s) 2076
BsrI ACTGG 5 cut(s) 479, 1004, 1015, 1096, 1272
BssAI RCCGGY 2 cut(s) 912, 1850
BssECI CCNNGG 4 cut(s) 92, 285, 816, 1057
BssSI CACGAG 1 cut(s) 561
BssT1I CCWWGG 2 cut(s) 285, 1057
Bst2BI CACGAG 1 cut(s) 561
Bst2UI CCWGG 4 cut(s) 93, 498, 817, 1005
Bst4CI ACNGT 7 cut(s) 521, 646, 839, 872, 1124, 1507, 1828
Bst6I CTCTTC 3 cut(s) 271, 1544, 1659
BstAPI GCANNNNNTGC 1 cut(s) 236
BstAUI TGTACA 1 cut(s) 2076
BstBAI YACGTR 3 cut(s) 762, 1961, 2300
BstBI TTCGAA 2 cut(s) 684, 737
BstC8I GCNNGC 3 cut(s) 1170, 1330, 1425
BstDEI CTNAG 3 cut(s) 792, 1301, 2101
BstENI CCTNNNNNAGG 1 cut(s) 419
BstF5I GGATG 6 cut(s) 50, 198, 475, 1106, 1680, 2174
BstFNI CGCG 1 cut(s) 383
BstH2I RGCGCY 2 cut(s) 984, 1765
BstHHI GCGC 3 cut(s) 983, 1764, 2095
BstMAI GTCTC 4 cut(s) 240, 321, 982, 1378
BstMCI CGRYCG 1 cut(s) 2249
BstMWI GCNNNNNNNGC 4 cut(s) 227, 236, 1174, 1290
BstNI CCWGG 4 cut(s) 93, 498, 817, 1005
BstNSI RCATGY 4 cut(s) 1427, 1696, 2114, 2257
BstSCI CCNGG 5 cut(s) 91, 496, 815, 1003, 1204
BstSFI CTRYAG 2 cut(s) 6, 2020
BstSLI GKGCMC 1 cut(s) 826
BstUI CGCG 1 cut(s) 383
BstV1I GCAGC 4 cut(s) 1243, 1246, 1438, 2249
BstV2I GAAGAC 3 cut(s) 756, 1143, 1829
BstX2I RGATCY 1 cut(s) 1924
BstYI RGATCY 1 cut(s) 1924
BstZI CGGCCG 1 cut(s) 2246
BsuI GTATCC 2 cut(s) 715, 2213
BsuRI GGCC 3 cut(s) 586, 1003, 2248
BtsCI GGATG 6 cut(s) 50, 198, 475, 1106, 1680, 2174
BtsI GCAGTG 1 cut(s) 1143
BtsIMutI CAGTG 3 cut(s) 14, 1143, 1833
BveI ACCTGC 1 cut(s) 2123
Cac8I GCNNGC 3 cut(s) 1170, 1330, 1425
CciI TCATGA 1 cut(s) 67
CfoI GCGC 3 cut(s) 983, 1764, 2095
Cfr10I RCCGGY 2 cut(s) 912, 1850
Cfr13I GGNCC 3 cut(s) 584, 910, 2155
Csp6I GTAC 9 cut(s) 25, 532, 718, 835, 1008, 1690, 1981, 2077, 2251
CspAI ACCGGT 1 cut(s) 912
CviQI GTAC 9 cut(s) 25, 532, 718, 835, 1008, 1690, 1981, 2077, 2251
DdeI CTNAG 3 cut(s) 792, 1301, 2101
EaeI YGGCCR 1 cut(s) 2246
EagI CGGCCG 1 cut(s) 2246
Eam1104I CTCTTC 3 cut(s) 271, 1544, 1659
EarI CTCTTC 3 cut(s) 271, 1544, 1659
EclXI CGGCCG 1 cut(s) 2246
Eco130I CCWWGG 2 cut(s) 285, 1057
Eco31I GGTCTC 3 cut(s) 321, 982, 1378
Eco47I GGWCC 2 cut(s) 910, 2155
Eco47III AGCGCT 2 cut(s) 982, 1763
Eco52I CGGCCG 1 cut(s) 2246
Eco57I CTGAAG 1 cut(s) 1491
Eco72I CACGTG 1 cut(s) 1961
Eco88I CYCGRG 2 cut(s) 1816, 1976
EcoNI CCTNNNNNAGG 1 cut(s) 419
EcoO109I RGGNCCY 2 cut(s) 584, 2155
EcoRI GAATTC 1 cut(s) 1127
EcoRII CCWGG 4 cut(s) 91, 496, 815, 1003
EcoT14I CCWWGG 2 cut(s) 285, 1057
EcoT22I ATGCAT 2 cut(s) 1429, 2116
ErhI CCWWGG 2 cut(s) 285, 1057
FalI AAGNNNNNCTT 2 cut(s) 944, 976
FaqI GGGAC 8 cut(s) 110, 151, 617, 655, 923, 1545, 1969, 2168
FauI CCCGC 1 cut(s) 632
FbaI TGATCA 2 cut(s) 18, 472
FblI GTMKAC 3 cut(s) 483, 2019, 2215
Fnu4HI GCNGC 6 cut(s) 384, 1257, 1260, 1452, 2056, 2238
FokI GGATG 6 cut(s) 37, 185, 462, 1113, 1687, 2161
Fsp4HI GCNGC 6 cut(s) 384, 1257, 1260, 1452, 2056, 2238
FspBI CTAG 8 cut(s) 375, 657, 768, 773, 978, 1155, 1748, 2165
GlaI GCGC 3 cut(s) 982, 1763, 2094
GluI GCNGC 6 cut(s) 384, 1257, 1260, 1452, 2056, 2238
GsaI CCCAGC 1 cut(s) 1956
HaeII RGCGCY 2 cut(s) 984, 1765
HaeIII GGCC 3 cut(s) 586, 1003, 2248
HapII CCGG 4 cut(s) 402, 913, 1205, 1851
HhaI GCGC 3 cut(s) 983, 1764, 2095
Hin6I GCGC 3 cut(s) 981, 1762, 2093
HinP1I GCGC 3 cut(s) 981, 1762, 2093
HincII GTYRAC 3 cut(s) 850, 973, 2277
HindII GTYRAC 3 cut(s) 850, 973, 2277
HindIII AAGCTT 2 cut(s) 466, 1705
HpaI GTTAAC 2 cut(s) 973, 2277
HpaII CCGG 4 cut(s) 402, 913, 1205, 1851
HphI GGTGA 4 cut(s) 944, 1188, 1759, 2275
Hpy188I TCNGA 8 cut(s) 181, 893, 1086, 1471, 1487, 1894, 2014, 2260
Hpy188III TCNNGA 9 cut(s) 68, 563, 743, 773, 791, 987, 1237, 1569, 1661
Hpy99I CGWCG 1 cut(s) 1531
HpyAV CCTTC 3 cut(s) 900, 1330, 1772
HpyCH4III ACNGT 7 cut(s) 521, 646, 839, 872, 1124, 1507, 1828
HpyCH4IV ACGT 4 cut(s) 761, 1960, 1983, 2299
HpyF10VI GCNNNNNNNGC 4 cut(s) 227, 236, 1174, 1290
HpyF3I CTNAG 3 cut(s) 792, 1301, 2101
HpySE526I ACGT 4 cut(s) 761, 1960, 1983, 2299
HspAI GCGC 3 cut(s) 981, 1762, 2093
KflI GGGWCCC 1 cut(s) 2155
Ksp22I TGATCA 2 cut(s) 18, 472
KspAI GTTAAC 2 cut(s) 973, 2277
LmnI GCTCC 3 cut(s) 355, 1113, 1931
Lsp1109I GCAGC 4 cut(s) 1243, 1246, 1438, 2249
LweI GCATC 8 cut(s) 59, 61, 140, 601, 851, 1091, 1293, 1665
MaeI CTAG 8 cut(s) 375, 657, 768, 773, 978, 1155, 1748, 2165
MaeII ACGT 4 cut(s) 761, 1960, 1983, 2299
MaeIII GTNAC 8 cut(s) 540, 563, 872, 956, 1030, 1049, 2034, 2295
MbiI CCGCTC 1 cut(s) 350
MfeI CAATTG 3 cut(s) 535, 620, 2189
MflI RGATCY 1 cut(s) 1924
MhlI GDGCHC 1 cut(s) 826
MlyI GAGTC 1 cut(s) 284
MmeI TCCRAC 3 cut(s) 871, 1109, 1645
Mph1103I ATGCAT 2 cut(s) 1429, 2116
MroXI GAANNNNTTC 1 cut(s) 1232
MseI TTAA 6 cut(s) 210, 972, 1590, 1601, 2195, 2276
MslI CAYNNNNRTG 3 cut(s) 55, 321, 1228
MspI CCGG 4 cut(s) 402, 913, 1205, 1851
MspR9I CCNGG 5 cut(s) 93, 498, 817, 1005, 1206
MunI CAATTG 3 cut(s) 535, 620, 2189
Mva1269I GAATGC 1 cut(s) 1656
MvaI CCWGG 4 cut(s) 93, 498, 817, 1005
MvnI CGCG 1 cut(s) 383
MwoI GCNNNNNNNGC 4 cut(s) 227, 236, 1174, 1290
NciI CCSGG 1 cut(s) 1206
NlaIV GGNNCC 4 cut(s) 178, 911, 2156, 2157
NmuCI GTSAC 4 cut(s) 540, 563, 872, 1049
NsiI ATGCAT 2 cut(s) 1429, 2116
NspI RCATGY 4 cut(s) 1427, 1696, 2114, 2257
NspV TTCGAA 2 cut(s) 684, 737
OliI CACNNNNGTG 1 cut(s) 1228
PaeI GCATGC 1 cut(s) 1427
PaeR7I CTCGAG 1 cut(s) 1816
PagI TCATGA 1 cut(s) 67
PciI ACATGT 1 cut(s) 2253
PcsI WCGNNNNNNNCGW 2 cut(s) 177, 897
PctI GAATGC 1 cut(s) 1656
PdmI GAANNNNTTC 1 cut(s) 1232
PfoI TCCNGGA 1 cut(s) 1204
PinAI ACCGGT 1 cut(s) 912
PkrI GCNGC 6 cut(s) 385, 1258, 1261, 1453, 2057, 2239
PleI GAGTC 1 cut(s) 284
PmaCI CACGTG 1 cut(s) 1961
PmlI CACGTG 1 cut(s) 1961
PpsI GAGTC 1 cut(s) 284
Ppu21I YACGTR 3 cut(s) 762, 1961, 2300
PpuMI RGGWCCY 1 cut(s) 2155
PscI ACATGT 1 cut(s) 2253
PshBI ATTAAT 1 cut(s) 1601
PsiI TTATAA 2 cut(s) 1512, 2051
Psp5II RGGWCCY 1 cut(s) 2155
Psp6I CCWGG 4 cut(s) 91, 496, 815, 1003
PspCI CACGTG 1 cut(s) 1961
PspFI CCCAGC 1 cut(s) 1952
PspGI CCWGG 4 cut(s) 91, 496, 815, 1003
PspN4I GGNNCC 4 cut(s) 178, 911, 2156, 2157
PspPI GGNCC 3 cut(s) 584, 910, 2155
PspPPI RGGWCCY 1 cut(s) 2155
PspXI VCTCGAGB 1 cut(s) 1816
PsuI RGATCY 1 cut(s) 1924
RsaI GTAC 9 cut(s) 26, 533, 719, 836, 1009, 1691, 1982, 2078, 2252
RsaNI GTAC 9 cut(s) 25, 532, 718, 835, 1008, 1690, 1981, 2077, 2251
RseI CAYNNNNRTG 3 cut(s) 55, 321, 1228
SaqAI TTAA 6 cut(s) 210, 972, 1590, 1601, 2195, 2276
SatI GCNGC 6 cut(s) 384, 1257, 1260, 1452, 2056, 2238
Sau96I GGNCC 3 cut(s) 584, 910, 2155
SchI GAGTC 1 cut(s) 284
ScrFI CCNGG 5 cut(s) 93, 498, 817, 1005, 1206
SduI GDGCHC 1 cut(s) 826
SfaNI GCATC 8 cut(s) 59, 61, 140, 601, 851, 1091, 1293, 1665
SfcI CTRYAG 2 cut(s) 6, 2020
Sfr274I CTCGAG 1 cut(s) 1816
SfuI TTCGAA 2 cut(s) 684, 737
SinI GGWCC 2 cut(s) 910, 2155
SlaI CTCGAG 1 cut(s) 1816
SmiMI CAYNNNNRTG 3 cut(s) 55, 321, 1228
SmlI CTYRAG 2 cut(s) 1788, 1816
SmoI CTYRAG 2 cut(s) 1788, 1816
SpeI ACTAGT 4 cut(s) 374, 656, 1154, 2164
SphI GCATGC 1 cut(s) 1427
SsiI CCGC 6 cut(s) 216, 348, 383, 438, 639, 2055
SspMI CTAG 8 cut(s) 375, 657, 768, 773, 978, 1155, 1748, 2165
StyD4I CCNGG 5 cut(s) 91, 496, 815, 1003, 1204
StyI CCWWGG 2 cut(s) 285, 1057
TaaI ACNGT 7 cut(s) 521, 646, 839, 872, 1124, 1507, 1828
TaiI ACGT 4 cut(s) 764, 1963, 1986, 2302
TaqI TCGA 6 cut(s) 684, 737, 986, 1065, 1817, 2169
TaqII GACCGA 2 cut(s) 1432, 2201
TatI WGTACW 2 cut(s) 1689, 2076
TauI GCSGC 2 cut(s) 386, 2058
Tru1I TTAA 6 cut(s) 210, 972, 1590, 1601, 2195, 2276
Tru9I TTAA 6 cut(s) 210, 972, 1590, 1601, 2195, 2276
TscAI CASTG 3 cut(s) 21, 1150, 1833
TseFI GTSAC 4 cut(s) 540, 563, 872, 1049
TseI GCWGC 4 cut(s) 1256, 1259, 1451, 2237
Tsp45I GTSAC 4 cut(s) 540, 563, 872, 1049
TspGWI ACGGA 4 cut(s) 194, 440, 1934, 2043
TspRI CASTG 3 cut(s) 21, 1150, 1833
VpaK11BI GGWCC 2 cut(s) 910, 2155
VspI ATTAAT 1 cut(s) 1601
XagI CCTNNNNNAGG 1 cut(s) 419
XapI RAATTY 4 cut(s) 151, 686, 1127, 1887
XbaI TCTAGA 1 cut(s) 772
XceI RCATGY 4 cut(s) 1427, 1696, 2114, 2257
XcmI CCANNNNNNNNNTGG 1 cut(s) 1705
XhoI CTCGAG 1 cut(s) 1816
XmiI GTMKAC 3 cut(s) 483, 2019, 2215
XmnI GAANNNNTTC 1 cut(s) 1232
XspI CTAG 8 cut(s) 375, 657, 768, 773, 978, 1155, 1748, 2165
Zsp2I ATGCAT 2 cut(s) 1429, 2116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.