Rroxscaffold_1G00054170

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
75517262 .. 75519533
2272 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00054170.1

Sequence Viewer

Length: 1809 bp
ATGGTTAATGTGATGACCATGTTTGCTGGTTTTCAAGAACATCAGGAGAAAGCAAAGTACCTTGTGCTCATTAACCATGGGTTTAGGTTTGATCAACTTTTAATTTTCTTCCTGATCATTCTTTCAAGCTTGTGGGATTTTCATGTTGCTGCTGCAGCAGACAATATTGGGGACACACTCAGAGTAGGCGACGCTCTCAATTCCTCAAGCGCCTTGGTTTCCGCCTCCAACAAGTTCACCTTGCTTTTCTTGACAAACGGTTCCAGTTCCAACTACAGCTATCTATATATTAGGCGGTATAATGTAACTGGTGCGAATAAGGCGTGGGTTGCCAACCTTGACACACCTATTTTATACCCTCATGGAGTTCTTACCTTGGACTCCAACAACACTTTGAAGATTATTACAACGCAAGGTGGTCTGGGCGATGGTGATGGTGAACATCCTGTAGTGCTTGGCTCTGTGCCAAAAAGTAGTAGTACTGTTGTGGCTACTCTATTGGATTCTGGTAATTTCGTCCTAAAAGAGCTGAACTCCGATGGATCAACAAAGCAGGTGTGGTGGCAAAGTTTTGATTATCCAACAGATACCTTTTTACCAGGCATGAAGTTGGGTGTCAACCATAGCAATGGGCACATTTGGTCTCTTACGTCATGGACTTCCGTTTTCTATCCACTGCCTGGGCCTTTCACCCTTGGTTGGGACCCAAATGGCCGCCAATTGGAAATTCGTGGACGAGGGATGGTTTATTGGAGAAGCGGAAACTACAACACAAGTAGTAATAGATTTGAATTCATTATACCGAATCAAAGGCTTACGTTCAATTATAGCATTGTTTCAAATAAGACGGAAGAATACCTCACTTACACAGCCAGAGATGATGATCAAAATGGTTATTTACCAGAATGGATGCTGAACTTCGATGGTAGACTTTTTAATTATTACGGATCAGCACTTGACATTGCACGAGCAGATGAGTGTGGAGGCTACAACACAGATGGACTAGGGTGCCAGACAAATGTCCAGCTAACTGATTCTTGTAAGGCAGAGGTTGGCCAACAATTTCAGCAAAGAAAGGGTTACTTTAAACCAATCATCTTGAGTTCCACTTCAAGATGCCCGTACTGGCTTAAGGTTGCTTCAAATACAACCTCTAATATTACTAGTACTGATTGTGAGGAGACTTGCAGGCAAAACTGTGACTGCCTTGGATTCGATTTTCTATCTCAGTATCCAACTGGATGCCGATTTTGGAGTTCAGATTGTGGATTCTTTGAAGACCTCAATCAACCAGGCACTGCAAGTAGTTTTACAAGATCAACGGCACCAAAATCATCACCCAGCAACAATATTGTTAGACAGATCAACTTCACGTTTTTGACGCTTTCTGTCTCTGCACTATTCTTAATAGGTGAGAATGAGATTGACCAGAACAAATTGCTGGTCACGGGACATGATTTAAGCATATTTAGCTATGCATCAATCATGGCTGCCACATGTAACTTCGCTGAAGAAAACAAGCTTGGAGAAGGGGGATTTGGACCTGTTTATAAGGGAAAATTGTTGACTGGAAAAGAAATAGCAGTGAAGAGGCTTTCAAAATGTTCAGGGCAAGGAACGTTAGAGTTTAGGAATGAATTGATCCTCATATGTGAACTTCAACATACAAACCTTGTCCAGCTTTTTGGATTTTGCATTCATGGGGAAGAAAGGATGTTGATATATGAGTACATGCCAAACAAAAGTCTAGACTGCTTTTTATTTGGTAATTCAGTTGTTAACATCAGTTTGATCTTAGTATTTGTTTAA

Protein Analysis

602

Amino Acids

67.17

Weight (kDa)

5.47

Isoelectric Point (pI)

33.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 109 - 219 1.8e-24 D-mannose binding lectin
Pkinase PF00069 503 - 587 1.1e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 505 - 587 5.9e-15 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1551
AarI CACCTGC 1 cut(s) 544
Acc36I ACCTGC 1 cut(s) 544
AccB1I GGYRCC 2 cut(s) 1008, 1324
AccB7I CCANNNNNTGG 1 cut(s) 680
AccI GTMKAC 1 cut(s) 928
AciI CCGC 4 cut(s) 222, 295, 715, 759
AclI AACGTT 1 cut(s) 1619
AclWI GGATC 3 cut(s) 550, 955, 1636
AcoI YGGCCR 2 cut(s) 712, 1054
AcsI RAATTY 2 cut(s) 726, 791
AcuI CTGAAG 1 cut(s) 1530
AfaI GTAC 5 cut(s) 59, 481, 1124, 1168, 1730
AfiI CCNNNNNNNGG 4 cut(s) 680, 699, 700, 721
AflII CTTAAG 1 cut(s) 1130
AflIII ACRYGT 1 cut(s) 1496
AhlI ACTAGT 1 cut(s) 1163
AjnI CCWGG 3 cut(s) 598, 679, 1291
AjuI GAANNNNNNNTTGG 6 cut(s) 711, 743, 1506, 1521, 1538, 1553
AluBI AGCT 7 cut(s) 129, 279, 529, 1027, 1473, 1522, 1681
AluI AGCT 7 cut(s) 129, 279, 529, 1027, 1473, 1522, 1681
Alw21I GWGCWC 1 cut(s) 69
Alw26I GTCTC 3 cut(s) 648, 1175, 1396
AlwI GGATC 3 cut(s) 550, 955, 1636
AlwNI CAGNNNCTG 1 cut(s) 1298
AoxI GGCC 3 cut(s) 683, 712, 1054
ApeKI GCWGC 4 cut(s) 149, 152, 155, 1490
ApoI RAATTY 2 cut(s) 726, 791
ArsI GACNNNNNNTTYG 2 cut(s) 1428, 1460
AspLEI GCGC 1 cut(s) 212
AspS9I GGNCC 3 cut(s) 683, 703, 1541
AsuHPI GGTGA 6 cut(s) 229, 443, 449, 682, 1329, 1424
AvaII GGWCC 2 cut(s) 703, 1541
BaeGI GKGCMC 1 cut(s) 636
BalI TGGCCA 1 cut(s) 1056
BanI GGYRCC 2 cut(s) 1008, 1324
BauI CACGAG 1 cut(s) 966
BbsI GAAGAC 1 cut(s) 1284
Bbv12I GWGCWC 1 cut(s) 69
BbvI GCAGC 4 cut(s) 136, 139, 167, 1477
BccI CCATC 6 cut(s) 422, 428, 533, 736, 917, 992
BceAI ACGGC 1 cut(s) 1338
BciT130I CCWGG 3 cut(s) 600, 681, 1293
BciVI GTATCC 1 cut(s) 1242
BclI TGATCA 3 cut(s) 91, 114, 883
BcoDI GTCTC 3 cut(s) 648, 1175, 1396
BcuI ACTAGT 1 cut(s) 1163
BfaI CTAG 3 cut(s) 1004, 1164, 1748
BfmI CTRYAG 3 cut(s) 153, 274, 447
BfoI RGCGCY 1 cut(s) 213
BfrI CTTAAG 1 cut(s) 1130
BfuAI ACCTGC 1 cut(s) 544
BfuI GTATCC 1 cut(s) 1242
BisI GCNGC 5 cut(s) 150, 153, 156, 715, 1491
BlsI GCNGC 5 cut(s) 151, 154, 157, 716, 1492
BmcAI AGTACT 2 cut(s) 481, 1168
Bme1390I CCNGG 3 cut(s) 600, 681, 1293
Bme18I GGWCC 2 cut(s) 703, 1541
BmgT120I GGNCC 3 cut(s) 683, 703, 1541
BmiI GGNNCC 5 cut(s) 262, 704, 705, 1010, 1326
BmrFI CCNGG 3 cut(s) 600, 681, 1293
BmsI GCATC 4 cut(s) 900, 1106, 1232, 1487
BoxI GACNNNNGTC 1 cut(s) 1019
BpiI GAAGAC 1 cut(s) 1284
BplI GAGNNNNNCTC 2 cut(s) 518, 550
BpuEI CTTGAG 2 cut(s) 190, 1120
BsaBI GATNNNNATC 1 cut(s) 882
BsaI GGTCTC 1 cut(s) 648
BsaJI CCNNGG 6 cut(s) 76, 213, 375, 680, 694, 1207
Bsc4I CCNNNNNNNGG 4 cut(s) 680, 699, 700, 721
Bse1I ACTGG 5 cut(s) 264, 313, 1130, 1243, 1573
Bse3DI GCAATG 2 cut(s) 634, 960
Bse8I GATNNNNATC 1 cut(s) 882
BseBI CCWGG 3 cut(s) 600, 681, 1293
BseDI CCNNGG 6 cut(s) 76, 213, 375, 680, 694, 1207
BseGI GGATG 5 cut(s) 442, 747, 915, 1247, 1719
BseJI GATNNNNATC 1 cut(s) 882
BseLI CCNNNNNNNGG 4 cut(s) 680, 699, 700, 721
BseMI GCAATG 2 cut(s) 634, 960
BseMII CTCAG 2 cut(s) 193, 1241
BseNI ACTGG 5 cut(s) 264, 313, 1130, 1243, 1573
BseRI GAGGAG 1 cut(s) 1193
BseSI GKGCMC 1 cut(s) 636
BseXI GCAGC 4 cut(s) 136, 139, 167, 1477
BseYI CCCAGC 1 cut(s) 1340
BsgI GTGCAG 1 cut(s) 1380
BshFI GGCC 3 cut(s) 685, 714, 1056
BshNI GGYRCC 2 cut(s) 1008, 1324
BsiHKAI GWGCWC 1 cut(s) 69
BslFI GGGAC 3 cut(s) 185, 716, 1464
BslI CCNNNNNNNGG 4 cut(s) 680, 699, 700, 721
BsmAI GTCTC 3 cut(s) 648, 1175, 1396
BsmFI GGGAC 3 cut(s) 185, 716, 1464
BsmI GAATGC 1 cut(s) 1695
BsnI GGCC 3 cut(s) 685, 714, 1056
Bso31I GGTCTC 1 cut(s) 648
Bsp1286I GDGCHC 2 cut(s) 69, 636
Bsp143I GATC 9 cut(s) 91, 114, 542, 883, 947, 1316, 1362, 1641, 1791
Bsp19I CCATGG 1 cut(s) 76
BspACI CCGC 4 cut(s) 222, 295, 715, 759
BspANI GGCC 3 cut(s) 685, 714, 1056
BspCNI CTCAG 2 cut(s) 192, 1240
BspLI GGNNCC 5 cut(s) 262, 704, 705, 1010, 1326
BspMAI CTGCAG 1 cut(s) 157
BspMI ACCTGC 1 cut(s) 544
BspPI GGATC 3 cut(s) 550, 955, 1636
BspT107I GGYRCC 2 cut(s) 1008, 1324
BspTI CTTAAG 1 cut(s) 1130
BspTNI GGTCTC 1 cut(s) 648
BsrDI GCAATG 2 cut(s) 634, 960
BsrI ACTGG 5 cut(s) 264, 313, 1130, 1243, 1573
BssECI CCNNGG 6 cut(s) 76, 213, 375, 680, 694, 1207
BssMI GATC 9 cut(s) 91, 114, 542, 883, 947, 1316, 1362, 1641, 1791
BssSI CACGAG 1 cut(s) 966
BssT1I CCWWGG 5 cut(s) 76, 213, 375, 694, 1207
Bst2BI CACGAG 1 cut(s) 966
Bst2UI CCWGG 3 cut(s) 600, 681, 1293
Bst4CI ACNGT 3 cut(s) 260, 484, 1199
Bst6I CTCTTC 1 cut(s) 1583
BstAFI CTTAAG 1 cut(s) 1130
BstC8I GCNNGC 1 cut(s) 1190
BstDEI CTNAG 3 cut(s) 179, 1227, 1795
BstDSI CCRYGG 1 cut(s) 76
BstF5I GGATG 5 cut(s) 442, 747, 915, 1247, 1719
BstH2I RGCGCY 1 cut(s) 213
BstHHI GCGC 1 cut(s) 212
BstKTI GATC 9 cut(s) 94, 117, 545, 886, 950, 1319, 1365, 1644, 1794
BstMAI GTCTC 3 cut(s) 648, 1175, 1396
BstMBI GATC 9 cut(s) 91, 114, 542, 883, 947, 1316, 1362, 1641, 1791
BstMWI GCNNNNNNNGC 4 cut(s) 155, 320, 329, 1470
BstNI CCWGG 3 cut(s) 600, 681, 1293
BstNSI RCATGY 2 cut(s) 1500, 1735
BstPAI GACNNNNGTC 1 cut(s) 1019
BstSCI CCNGG 3 cut(s) 598, 679, 1291
BstSFI CTRYAG 3 cut(s) 153, 274, 447
BstSLI GKGCMC 1 cut(s) 636
BstV1I GCAGC 4 cut(s) 136, 139, 167, 1477
BstV2I GAAGAC 1 cut(s) 1284
BstXI CCANNNNNNTGG 2 cut(s) 629, 1685
BsuI GTATCC 1 cut(s) 1242
BsuRI GGCC 3 cut(s) 685, 714, 1056
BtgI CCRYGG 1 cut(s) 76
BtgZI GCGATG 1 cut(s) 441
BtsCI GGATG 5 cut(s) 442, 747, 915, 1247, 1719
BtsI GCAGTG 3 cut(s) 674, 1296, 1590
BtsIMutI CAGTG 3 cut(s) 674, 1296, 1590
BveI ACCTGC 1 cut(s) 544
Cac8I GCNNGC 1 cut(s) 1190
CaiI CAGNNNCTG 1 cut(s) 1298
CfoI GCGC 1 cut(s) 212
Cfr13I GGNCC 3 cut(s) 683, 703, 1541
CseI GACGC 2 cut(s) 200, 1390
Csp6I GTAC 5 cut(s) 58, 480, 1123, 1167, 1729
CviQI GTAC 5 cut(s) 58, 480, 1123, 1167, 1729
DdeI CTNAG 3 cut(s) 179, 1227, 1795
DpnI GATC 9 cut(s) 93, 116, 544, 885, 949, 1318, 1364, 1643, 1793
DpnII GATC 9 cut(s) 91, 114, 542, 883, 947, 1316, 1362, 1641, 1791
DraI TTTAAA 1 cut(s) 1087
EaeI YGGCCR 2 cut(s) 712, 1054
Eam1104I CTCTTC 1 cut(s) 1583
EarI CTCTTC 1 cut(s) 1583
EciI GGCGGA 1 cut(s) 211
Eco130I CCWWGG 5 cut(s) 76, 213, 375, 694, 1207
Eco31I GGTCTC 1 cut(s) 648
Eco47I GGWCC 2 cut(s) 703, 1541
Eco57I CTGAAG 1 cut(s) 1530
EcoO109I RGGNCCY 1 cut(s) 703
EcoRI GAATTC 1 cut(s) 791
EcoRII CCWGG 3 cut(s) 598, 679, 1291
EcoT14I CCWWGG 5 cut(s) 76, 213, 375, 694, 1207
EcoT22I ATGCAT 1 cut(s) 1480
ErhI CCWWGG 5 cut(s) 76, 213, 375, 694, 1207
FalI AAGNNNNNCTT 4 cut(s) 224, 256, 1067, 1099
FaqI GGGAC 3 cut(s) 185, 716, 1464
FauNDI CATATG 1 cut(s) 1649
FbaI TGATCA 3 cut(s) 91, 114, 883
FblI GTMKAC 1 cut(s) 928
Fnu4HI GCNGC 5 cut(s) 150, 153, 156, 715, 1491
FokI GGATG 5 cut(s) 429, 754, 922, 1254, 1726
Fsp4HI GCNGC 5 cut(s) 150, 153, 156, 715, 1491
FspBI CTAG 3 cut(s) 1004, 1164, 1748
GlaI GCGC 1 cut(s) 211
GluI GCNGC 5 cut(s) 150, 153, 156, 715, 1491
GsaI CCCAGC 1 cut(s) 1344
HaeII RGCGCY 1 cut(s) 213
HaeIII GGCC 3 cut(s) 685, 714, 1056
HgaI GACGC 2 cut(s) 200, 1390
HhaI GCGC 1 cut(s) 212
Hin6I GCGC 1 cut(s) 210
HinP1I GCGC 1 cut(s) 210
HincII GTYRAC 3 cut(s) 619, 1566, 1780
HindII GTYRAC 3 cut(s) 619, 1566, 1780
HindIII AAGCTT 2 cut(s) 127, 1520
HinfI GANTC 6 cut(s) 380, 503, 805, 1034, 1212, 1269
HpaI GTTAAC 1 cut(s) 1780
HphI GGTGA 6 cut(s) 229, 443, 449, 682, 1329, 1424
Hpy166II GTNNAC 8 cut(s) 237, 440, 619, 734, 929, 1566, 1655, 1780
Hpy188I TCNGA 3 cut(s) 182, 538, 1261
Hpy188III TCNNGA 7 cut(s) 35, 44, 112, 250, 1099, 1113, 1748
Hpy8I GTNNAC 8 cut(s) 237, 440, 619, 734, 929, 1566, 1655, 1780
Hpy99I CGWCG 1 cut(s) 194
HpyAV CCTTC 1 cut(s) 1523
HpyCH4III ACNGT 3 cut(s) 260, 484, 1199
HpyCH4IV ACGT 4 cut(s) 650, 818, 1373, 1619
HpyCH4V TGCA 7 cut(s) 155, 965, 1188, 1301, 1397, 1478, 1695
HpyF10VI GCNNNNNNNGC 4 cut(s) 155, 320, 329, 1470
HpyF3I CTNAG 3 cut(s) 179, 1227, 1795
HpySE526I ACGT 4 cut(s) 650, 818, 1373, 1619
HspAI GCGC 1 cut(s) 210
KflI GGGWCCC 1 cut(s) 703
Ksp22I TGATCA 3 cut(s) 91, 114, 883
KspAI GTTAAC 1 cut(s) 1780
Kzo9I GATC 9 cut(s) 91, 114, 542, 883, 947, 1316, 1362, 1641, 1791
Lsp1109I GCAGC 4 cut(s) 136, 139, 167, 1477
LweI GCATC 4 cut(s) 900, 1106, 1232, 1487
MaeI CTAG 3 cut(s) 1004, 1164, 1748
MaeII ACGT 4 cut(s) 650, 818, 1373, 1619
MaeIII GTNAC 5 cut(s) 304, 1079, 1199, 1444, 1499
MalI GATC 9 cut(s) 93, 116, 544, 885, 949, 1318, 1364, 1643, 1793
MboI GATC 9 cut(s) 91, 114, 542, 883, 947, 1316, 1362, 1641, 1791
MboII GAAGA 7 cut(s) 100, 409, 863, 1289, 1523, 1600, 1718
MfeI CAATTG 1 cut(s) 719
MhlI GDGCHC 2 cut(s) 69, 636
MlsI TGGCCA 1 cut(s) 1056
MluNI TGGCCA 1 cut(s) 1056
MlyI GAGTC 1 cut(s) 374
MmeI TCCRAC 5 cut(s) 252, 294, 408, 605, 1259
Mox20I TGGCCA 1 cut(s) 1056
Mph1103I ATGCAT 1 cut(s) 1480
MscI TGGCCA 1 cut(s) 1056
MslI CAYNNNNRTG 1 cut(s) 627
Msp20I TGGCCA 1 cut(s) 1056
MspCI CTTAAG 1 cut(s) 1130
MspR9I CCNGG 3 cut(s) 600, 681, 1293
MunI CAATTG 1 cut(s) 719
Mva1269I GAATGC 1 cut(s) 1695
MvaI CCWGG 3 cut(s) 600, 681, 1293
MwoI GCNNNNNNNGC 4 cut(s) 155, 320, 329, 1470
NcoI CCATGG 1 cut(s) 76
NdeI CATATG 1 cut(s) 1649
NdeII GATC 9 cut(s) 91, 114, 542, 883, 947, 1316, 1362, 1641, 1791
NlaIV GGNNCC 5 cut(s) 262, 704, 705, 1010, 1326
NmuCI GTSAC 2 cut(s) 1199, 1444
NsiI ATGCAT 1 cut(s) 1480
NspI RCATGY 2 cut(s) 1500, 1735
PaqCI CACCTGC 1 cut(s) 544
PciI ACATGT 1 cut(s) 1496
PctI GAATGC 1 cut(s) 1695
PfeI GAWTC 5 cut(s) 503, 805, 1034, 1212, 1269
PflMI CCANNNNNTGG 1 cut(s) 680
PkrI GCNGC 5 cut(s) 151, 154, 157, 716, 1492
PleI GAGTC 1 cut(s) 374
PpsI GAGTC 1 cut(s) 374
PpuMI RGGWCCY 1 cut(s) 703
PscI ACATGT 1 cut(s) 1496
PshAI GACNNNNGTC 1 cut(s) 1019
PsiI TTATAA 1 cut(s) 1551
Psp1406I AACGTT 1 cut(s) 1619
Psp5II RGGWCCY 1 cut(s) 703
Psp6I CCWGG 3 cut(s) 598, 679, 1291
PspFI CCCAGC 1 cut(s) 1340
PspGI CCWGG 3 cut(s) 598, 679, 1291
PspN4I GGNNCC 5 cut(s) 262, 704, 705, 1010, 1326
PspPI GGNCC 3 cut(s) 683, 703, 1541
PspPPI RGGWCCY 1 cut(s) 703
PstI CTGCAG 1 cut(s) 157
PstNI CAGNNNCTG 1 cut(s) 1298
RsaI GTAC 5 cut(s) 59, 481, 1124, 1168, 1730
RsaNI GTAC 5 cut(s) 58, 480, 1123, 1167, 1729
RseI CAYNNNNRTG 1 cut(s) 627
SatI GCNGC 5 cut(s) 150, 153, 156, 715, 1491
Sau3AI GATC 9 cut(s) 91, 114, 542, 883, 947, 1316, 1362, 1641, 1791
Sau96I GGNCC 3 cut(s) 683, 703, 1541
ScaI AGTACT 2 cut(s) 481, 1168
SchI GAGTC 1 cut(s) 374
ScrFI CCNGG 3 cut(s) 600, 681, 1293
SduI GDGCHC 2 cut(s) 69, 636
SfaNI GCATC 4 cut(s) 900, 1106, 1232, 1487
SfcI CTRYAG 3 cut(s) 153, 274, 447
SinI GGWCC 2 cut(s) 703, 1541
SmiMI CAYNNNNRTG 1 cut(s) 627
SmlI CTYRAG 3 cut(s) 205, 1099, 1130
SmoI CTYRAG 3 cut(s) 205, 1099, 1130
SpeI ACTAGT 1 cut(s) 1163
SsiI CCGC 4 cut(s) 222, 295, 715, 759
SspI AATATT 3 cut(s) 166, 1159, 1351
SspMI CTAG 3 cut(s) 1004, 1164, 1748
StyD4I CCNGG 3 cut(s) 598, 679, 1291
StyI CCWWGG 5 cut(s) 76, 213, 375, 694, 1207
TaaI ACNGT 3 cut(s) 260, 484, 1199
TaiI ACGT 4 cut(s) 653, 821, 1376, 1622
TaqI TCGA 2 cut(s) 921, 1215
TatI WGTACW 3 cut(s) 479, 1166, 1728
TauI GCSGC 1 cut(s) 717
TfiI GAWTC 5 cut(s) 503, 805, 1034, 1212, 1269
TscAI CASTG 3 cut(s) 681, 1303, 1590
TseFI GTSAC 2 cut(s) 1199, 1444
TseI GCWGC 4 cut(s) 149, 152, 155, 1490
Tsp45I GTSAC 2 cut(s) 1199, 1444
TspDTI ATGAA 5 cut(s) 131, 620, 784, 1650, 1688
TspGWI ACGGA 3 cut(s) 652, 863, 960
TspRI CASTG 3 cut(s) 681, 1303, 1590
Van91I CCANNNNNTGG 1 cut(s) 680
Vha464I CTTAAG 1 cut(s) 1130
VpaK11BI GGWCC 2 cut(s) 703, 1541
XapI RAATTY 2 cut(s) 726, 791
XbaI TCTAGA 1 cut(s) 1747
XceI RCATGY 2 cut(s) 1500, 1735
XmiI GTMKAC 1 cut(s) 928
XspI CTAG 3 cut(s) 1004, 1164, 1748
ZrmI AGTACT 2 cut(s) 481, 1168
Zsp2I ATGCAT 1 cut(s) 1480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.