Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000096

Physical Location & Seq

Genomic Coordinates Reverse (-)

75854205 .. 75858452

Gene Structure 4248 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00054450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGAGTTTGTTGCGGTTTCAGTTACCTAATAGTCTCAACTTGTTCTTCATCATTTTTGCAATCTTATGGACTTATCATGAGGCAGCAAGGGACACACTTAAACTAGGGGACACTCTCAATTCATCAAGTTCCTTGGTTTCTGCAAAGGGAAAGTTCACTATGGGTTTCTATGTAAATGATGAAAATTCCAACTCCAGCTTCCTAGCTACATGGCAGATGGGAAGTAGAAATCACGCATGGATTGCCAACCGATACACACCAGTATTATACCCTTCCGGAGTTCTAACATTGGACATGAATAAAACATTAAAAATTATGCACAAAGGTGGTGATCCTGTGGTGCTTTTCCGGGCTTCTGAAACTAACAGTATTCACAGTACTAGAAGTGTTGTGGCTACTCTGTTGGATTCTGGAAATTTTATTGTGCAAGAACTGAACTCTGATGGAACAATGAGGCAGGTACTGTGGCAAAGTTTTGATTATCCTACAGACACCCTTTTGCCAGGCATGAAAGTAGGAGTTAACCACAAAAATGGCCACATTTGGTTTCTTTCAGCATGGTCAGGTGAGGACCAACCAGCACCAGGGCCTTTCACCCTTGATTGGGACCCTAGTGGACGTGAACTGAAAATAAAGCGACGTGCGGTAGTTTATTGGACCAGTGGAATCTTTAGAGATGGGCAATTCGAATTTATGAAACCTTATGATGAATTGGGTACTCTCAGGTATAAGTTTAGCATTGTTTCGAATGAGAATGGAGACTACTTCACTTACACTACTGCTAGTGTAAATCAAAGTCATGAACCTGAATGGGTGCTAAACATCTTGGGGAAATTCCTTGAATTAGAAGGAAATGTTATTGCACCAGCAGATCAGTGTTATGGCTTTAACACTGATGGAGGGTGCCAGAGGCGGCACTATCCCAGTTGCAGGCATTTTGGTGACACATTTGTGGAAACGCATGGTTACTTCAAATCACTCACATCCAATCAGACAATTGAGCATGACTTAAATACAAGTCTCACTGTTAGTGATTGTAAGGCAGCTTGTTGGGAGGATTGTGACTGTCTCGGATTCATGACTCTCTTCGAAAATCAGACTGGATGTAAATTTTGGGTCGGAAACTGGACCTTTAGTTCACGTGACCTCTTTGGTTATACTAATCCAAGAATTTTTGTCCTATCTGGATTATCTCGCAATGATACAACCAACGAAGAATCAGATACTAACAGTTGGATATGGATTGGTACTTCCATTGCTGCTGCTCTGTTATTAATGGTGCTTTGCATCTTGTGTTATCTCCTAAGAAGAAGAAAATCCTTCCTTTCAGGGAAATGCCAGCAAAAGATTGAGAATGAATTGCTAGATTTGGTGCAATCTGATAATTCGCTTCATGCTGAGGGGCTTCCTAATGAGGGAAAGATGGGACATAATGATTTAAGTGCATATACTTATGCATCTGTCTTGGCTGCTACAAGCAACTTTTCTGATGAAAACAAACTTGGAGAGGGGGATTTGGACCTGTTTATAGGGGTGAGGGTAATTCATAGAGATTTAAAAGCTAGTAACATTCTACTTGATGAAAACATGATTCCCAGAATATCTGACTTTGGTTTGGCAAGGATTTTCATGCATGATGAACCAGAAGCAAATACTCATAGGGTTGTCGGTACACATGGTTACATGTCTCCTGAGTATGCCATGGAGGGAATTTTCTCCGCAAAATCTGATGTCTACAGTTTTGGTGTGCTAATGCTTGAAATCATAAGTGGAAGGAAAAGCAGTAGTTTCAACGATAATGATCATGTGTTGAATATAGTAGGATATGCATGGGAGTTGTGGAAACAAGGTCTTGGGTTACAATTAATGGATCCAACACTGTGCAGCTCATATATTGAAGATCAACTGTTGAGATGCTTCCATGTTGGTCTGCTTTGTGTGGAAGAAAAGGCAGTTGATCGACCCACCATGTCTGATGTCGTATCTATATCTATATCTATGCTAACAAATGAAGGCATGTCACTACCTGCACCTACAAAACCAGCATTTTGTACGGGAAAAAAAGTCGTAGGGGCTGGTATAGATGGAAAGGGATCAGAATCAATAAATGATATATCGGATTATGAAGTTGAGGGACGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

713

Amino Acids

79.88

Weight (kDa)

5.25

Isoelectric Point (pI)

38.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	80 - 187	1.4e-24	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	513 - 661	2.5e-22	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	513 - 602	2e-20	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000096)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica	MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica	Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis	pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis	RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata	RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora	Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa	Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha	Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana	Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	448, 2035
AccB1I	GGYRCC	1 cut(s)	903
AccI	GTMKAC	1 cut(s)	1734
AccIII	TCCGGA	1 cut(s)	275
AciI	CCGC	4 cut(s)	13, 644, 913, 1719
AclWI	GGATC	4 cut(s)	326, 1865, 1878, 2101
AcoI	YGGCCR	1 cut(s)	535
AcsI	RAATTY	7 cut(s)	184, 415, 689, 833, 1109, 1170, 1710
AcvI	CACGTG	1 cut(s)	1142
AfaI	GTAC	6 cut(s)	379, 462, 718, 1249, 1672, 2053
AfiI	CCNNNNNNNGG	5 cut(s)	584, 603, 604, 930, 1415
AflIII	ACRYGT	1 cut(s)	1683
AgsI	TTSAA	6 cut(s)	842, 973, 1760, 1792, 1813, 1898
AjiI	CACGTC	2 cut(s)	620, 641
AjnI	CCWGG	2 cut(s)	502, 583
AjuI	GAANNNNNNNTTGG	4 cut(s)	182, 214, 1485, 1517
AleI	CACNNNNGTG	2 cut(s)	324, 950
AloI	GAACNNNNNNTCC	2 cut(s)	1120, 1152
AluBI	AGCT	5 cut(s)	198, 206, 1046, 1562, 1887
AluI	AGCT	5 cut(s)	198, 206, 1046, 1562, 1887
Alw26I	GTCTC	5 cut(s)	38, 753, 1025, 1073, 1692
AlwI	GGATC	4 cut(s)	326, 1865, 1878, 2101
AlwNI	CAGNNNCTG	1 cut(s)	463
Aor13HI	TCCGGA	1 cut(s)	275
AoxI	GGCC	2 cut(s)	535, 587
ApeKI	GCWGC	6 cut(s)	83, 1043, 1259, 1262, 1469, 1884
ApoI	RAATTY	7 cut(s)	184, 415, 689, 833, 1109, 1170, 1710
AseI	ATTAAT	2 cut(s)	1274, 1865
AspS9I	GGNCC	6 cut(s)	571, 587, 607, 657, 1128, 1519
AsuC2I	CCSGG	1 cut(s)	350
AsuHPI	GGTGA	5 cut(s)	341, 578, 586, 953, 1546
AsuII	TTCGAA	3 cut(s)	687, 746, 1089
AvaII	GGWCC	5 cut(s)	571, 607, 657, 1128, 1519
BalI	TGGCCA	1 cut(s)	537
BamHI	GGATCC	1 cut(s)	1870
BanI	GGYRCC	1 cut(s)	903
BbrPI	CACGTG	1 cut(s)	1142
BbvCI	CCTCAGC	1 cut(s)	1398
BbvI	GCAGC	6 cut(s)	95, 1055, 1246, 1249, 1456, 1896
BccI	CCATC	6 cut(s)	211, 437, 671, 890, 1417, 2078
BciT130I	CCWGG	2 cut(s)	504, 585
BclI	TGATCA	1 cut(s)	1801
BcnI	CCSGG	1 cut(s)	350
BcoDI	GTCTC	5 cut(s)	38, 753, 1025, 1073, 1692
BfaI	CTAG	7 cut(s)	104, 203, 381, 612, 783, 1364, 1563
BfmI	CTRYAG	2 cut(s)	486, 1735
BfuAI	ACCTGC	2 cut(s)	448, 2035
BisI	GCNGC	7 cut(s)	84, 914, 1044, 1260, 1263, 1470, 1885
BlsI	GCNGC	7 cut(s)	85, 915, 1045, 1261, 1264, 1471, 1886
BmcAI	AGTACT	1 cut(s)	379
Bme1390I	CCNGG	3 cut(s)	350, 504, 585
Bme18I	GGWCC	5 cut(s)	571, 607, 657, 1128, 1519
BmgBI	CACGTC	2 cut(s)	620, 641
BmgT120I	GGNCC	6 cut(s)	571, 587, 607, 657, 1128, 1519
BmiI	GGNNCC	4 cut(s)	608, 609, 905, 1872
BmrFI	CCNGG	3 cut(s)	350, 504, 585
BmrI	ACTGGG	1 cut(s)	918
BmsI	GCATC	3 cut(s)	1296, 1466, 1904
BmuI	ACTGGG	1 cut(s)	918
BpmI	CTGGAG	1 cut(s)	178
Bpu10I	CCTNAGC	1 cut(s)	1398
Bpu14I	TTCGAA	3 cut(s)	687, 746, 1089
BpuMI	CCSGG	1 cut(s)	350
BsaAI	YACGTR	1 cut(s)	1142
BsaBI	GATNNNNATC	2 cut(s)	1800, 2098
BsaJI	CCNNGG	3 cut(s)	132, 584, 1701
BsaWI	WCCGGW	1 cut(s)	275
Bsc4I	CCNNNNNNNGG	5 cut(s)	584, 603, 604, 930, 1415
Bse1I	ACTGG	5 cut(s)	260, 660, 924, 1105, 1130
Bse3DI	GCAATG	2 cut(s)	1204, 1254
Bse8I	GATNNNNATC	2 cut(s)	1800, 2098
BseAI	TCCGGA	1 cut(s)	275
BseBI	CCWGG	2 cut(s)	504, 585
BseDI	CCNNGG	3 cut(s)	132, 584, 1701
BseGI	GGATG	2 cut(s)	983, 1109
BseJI	GATNNNNATC	2 cut(s)	1800, 2098
BseLI	CCNNNNNNNGG	5 cut(s)	584, 603, 604, 930, 1415
BseMI	GCAATG	2 cut(s)	1204, 1254
BseMII	CTCAG	3 cut(s)	736, 1389, 1683
BseNI	ACTGG	5 cut(s)	260, 660, 924, 1105, 1130
BseXI	GCAGC	6 cut(s)	95, 1055, 1246, 1249, 1456, 1896
BsgI	GTGCAG	2 cut(s)	1903, 2013
BshFI	GGCC	2 cut(s)	537, 589
BshNI	GGYRCC	1 cut(s)	903
BsiSI	CCGG	2 cut(s)	276, 349
BslFI	GGGAC	4 cut(s)	104, 122, 620, 1440
BslI	CCNNNNNNNGG	5 cut(s)	584, 603, 604, 930, 1415
BsmAI	GTCTC	5 cut(s)	38, 753, 1025, 1073, 1692
BsmFI	GGGAC	4 cut(s)	104, 122, 620, 1440
BsnI	GGCC	2 cut(s)	537, 589
Bsp119I	TTCGAA	3 cut(s)	687, 746, 1089
Bsp13I	TCCGGA	1 cut(s)	275
Bsp143I	GATC	7 cut(s)	331, 871, 1801, 1870, 1900, 1957, 2093
Bsp19I	CCATGG	1 cut(s)	1701
BspACI	CCGC	4 cut(s)	13, 644, 913, 1719
BspANI	GGCC	2 cut(s)	537, 589
BspCNI	CTCAG	3 cut(s)	735, 1390, 1684
BspEI	TCCGGA	1 cut(s)	275
BspHI	TCATGA	3 cut(s)	76, 799, 1077
BspLI	GGNNCC	4 cut(s)	608, 609, 905, 1872
BspMI	ACCTGC	2 cut(s)	448, 2035
BspPI	GGATC	4 cut(s)	326, 1865, 1878, 2101
BspT104I	TTCGAA	3 cut(s)	687, 746, 1089
BspT107I	GGYRCC	1 cut(s)	903
BsrDI	GCAATG	2 cut(s)	1204, 1254
BsrI	ACTGG	5 cut(s)	260, 660, 924, 1105, 1130
BssECI	CCNNGG	3 cut(s)	132, 584, 1701
BssMI	GATC	7 cut(s)	331, 871, 1801, 1870, 1900, 1957, 2093
BssT1I	CCWWGG	2 cut(s)	132, 1701
Bst2UI	CCWGG	2 cut(s)	504, 585
Bst4CI	ACNGT	9 cut(s)	368, 377, 465, 1027, 1067, 1232, 1739, 1881, 1908
Bst6I	CTCTTC	1 cut(s)	1091
BstAPI	GCANNNNNTGC	1 cut(s)	242
BstBAI	YACGTR	1 cut(s)	1142
BstBI	TTCGAA	3 cut(s)	687, 746, 1089
BstC8I	GCNNGC	2 cut(s)	932, 1340
BstDEI	CTNAG	4 cut(s)	722, 1304, 1398, 1692
BstDSI	CCRYGG	1 cut(s)	1701
BstF5I	GGATG	2 cut(s)	983, 1109
BstKTI	GATC	7 cut(s)	334, 874, 1804, 1873, 1903, 1960, 2096
BstMAI	GTCTC	5 cut(s)	38, 753, 1025, 1073, 1692
BstMBI	GATC	7 cut(s)	331, 871, 1801, 1870, 1900, 1957, 2093
BstMWI	GCNNNNNNNGC	1 cut(s)	242
BstNI	CCWGG	2 cut(s)	504, 585
BstNSI	RCATGY	2 cut(s)	1687, 2020
BstSCI	CCNGG	3 cut(s)	348, 502, 583
BstSFI	CTRYAG	2 cut(s)	486, 1735
BstV1I	GCAGC	6 cut(s)	95, 1055, 1246, 1249, 1456, 1896
BstX2I	RGATCY	1 cut(s)	1870
BstXI	CCANNNNNNTGG	1 cut(s)	533
BstYI	RGATCY	1 cut(s)	1870
BsuRI	GGCC	2 cut(s)	537, 589
BtgI	CCRYGG	1 cut(s)	1701
BtrI	CACGTC	2 cut(s)	620, 641
BtsCI	GGATG	2 cut(s)	983, 1109
BtsIMutI	CAGTG	5 cut(s)	667, 881, 891, 1023, 1877
BveI	ACCTGC	2 cut(s)	448, 2035
Cac8I	GCNNGC	2 cut(s)	932, 1340
CaiI	CAGNNNCTG	1 cut(s)	463
CciI	TCATGA	3 cut(s)	76, 799, 1077
Cfr13I	GGNCC	6 cut(s)	571, 587, 607, 657, 1128, 1519
Csp6I	GTAC	6 cut(s)	378, 461, 717, 1248, 1671, 2052
CviQI	GTAC	6 cut(s)	378, 461, 717, 1248, 1671, 2052
DdeI	CTNAG	4 cut(s)	722, 1304, 1398, 1692
DpnI	GATC	7 cut(s)	333, 873, 1803, 1872, 1902, 1959, 2095
DpnII	GATC	7 cut(s)	331, 871, 1801, 1870, 1900, 1957, 2093
DraI	TTTAAA	1 cut(s)	1557
EaeI	YGGCCR	1 cut(s)	535
Eam1104I	CTCTTC	1 cut(s)	1091
EarI	CTCTTC	1 cut(s)	1091
Eco130I	CCWWGG	2 cut(s)	132, 1701
Eco47I	GGWCC	5 cut(s)	571, 607, 657, 1128, 1519
Eco72I	CACGTG	1 cut(s)	1142
EcoO109I	RGGNCCY	2 cut(s)	587, 607
EcoRII	CCWGG	2 cut(s)	502, 583
EcoT14I	CCWWGG	2 cut(s)	132, 1701
EcoT22I	ATGCAT	3 cut(s)	1459, 1635, 1831
ErhI	CCWWGG	2 cut(s)	132, 1701
FaqI	GGGAC	4 cut(s)	104, 122, 620, 1440
FbaI	TGATCA	1 cut(s)	1801
FblI	GTMKAC	1 cut(s)	1734
Fnu4HI	GCNGC	7 cut(s)	84, 914, 1044, 1260, 1263, 1470, 1885
FokI	GGATG	2 cut(s)	970, 1116
Fsp4HI	GCNGC	7 cut(s)	84, 914, 1044, 1260, 1263, 1470, 1885
FspBI	CTAG	7 cut(s)	104, 203, 381, 612, 783, 1364, 1563
GluI	GCNGC	7 cut(s)	84, 914, 1044, 1260, 1263, 1470, 1885
GsuI	CTGGAG	1 cut(s)	178
HaeIII	GGCC	2 cut(s)	537, 589
HapII	CCGG	2 cut(s)	276, 349
HincII	GTYRAC	1 cut(s)	523
HindII	GTYRAC	1 cut(s)	523
HinfI	GANTC	7 cut(s)	407, 666, 1074, 1081, 1217, 1591, 2099
HpaI	GTTAAC	1 cut(s)	523
HpaII	CCGG	2 cut(s)	276, 349
HphI	GGTGA	5 cut(s)	341, 578, 586, 953, 1546
Hpy166II	GTNNAC	7 cut(s)	156, 523, 617, 623, 1139, 1673, 1735
Hpy188III	TCNNGA	7 cut(s)	77, 276, 411, 800, 1078, 1185, 1691
Hpy8I	GTNNAC	7 cut(s)	156, 523, 617, 623, 1139, 1673, 1735
Hpy99I	CGWCG	1 cut(s)	642
HpyAV	CCTTC	5 cut(s)	282, 842, 1330, 1767, 2006
HpyCH4III	ACNGT	9 cut(s)	368, 377, 465, 1027, 1067, 1232, 1739, 1881, 1908
HpyCH4IV	ACGT	4 cut(s)	619, 640, 1141, 2137
HpyF10VI	GCNNNNNNNGC	1 cut(s)	242
HpyF3I	CTNAG	4 cut(s)	722, 1304, 1398, 1692
HpySE526I	ACGT	4 cut(s)	619, 640, 1141, 2137
KflI	GGGWCCC	1 cut(s)	607
Kpn2I	TCCGGA	1 cut(s)	275
Ksp22I	TGATCA	1 cut(s)	1801
KspAI	GTTAAC	1 cut(s)	523
Kzo9I	GATC	7 cut(s)	331, 871, 1801, 1870, 1900, 1957, 2093
Lsp1109I	GCAGC	6 cut(s)	95, 1055, 1246, 1249, 1456, 1896
LweI	GCATC	3 cut(s)	1296, 1466, 1904
MaeI	CTAG	7 cut(s)	104, 203, 381, 612, 783, 1364, 1563
MaeII	ACGT	4 cut(s)	619, 640, 1141, 2137
MaeIII	GTNAC	9 cut(s)	21, 941, 965, 1061, 1142, 1565, 1679, 1857, 2019
MalI	GATC	7 cut(s)	333, 873, 1803, 1872, 1902, 1959, 2095
MboI	GATC	7 cut(s)	331, 871, 1801, 1870, 1900, 1957, 2093
MboII	GAAGA	7 cut(s)	37, 1078, 1226, 1320, 1323, 1910, 1955
MfeI	CAATTG	1 cut(s)	996
MflI	RGATCY	1 cut(s)	1870
MlsI	TGGCCA	1 cut(s)	537
MluNI	TGGCCA	1 cut(s)	537
MlyI	GAGTC	1 cut(s)	1075
MmeI	TCCRAC	5 cut(s)	213, 384, 1099, 1214, 1898
Mox20I	TGGCCA	1 cut(s)	537
Mph1103I	ATGCAT	3 cut(s)	1459, 1635, 1831
MroI	TCCGGA	1 cut(s)	275
MscI	TGGCCA	1 cut(s)	537
MslI	CAYNNNNRTG	4 cut(s)	324, 531, 939, 950
Msp20I	TGGCCA	1 cut(s)	537
MspI	CCGG	2 cut(s)	276, 349
MspR9I	CCNGG	3 cut(s)	350, 504, 585
MunI	CAATTG	1 cut(s)	996
MvaI	CCWGG	2 cut(s)	504, 585
MwoI	GCNNNNNNNGC	1 cut(s)	242
NciI	CCSGG	1 cut(s)	350
NcoI	CCATGG	1 cut(s)	1701
NdeII	GATC	7 cut(s)	331, 871, 1801, 1870, 1900, 1957, 2093
NlaIV	GGNNCC	4 cut(s)	608, 609, 905, 1872
NmuCI	GTSAC	4 cut(s)	941, 1061, 1142, 2019
NsiI	ATGCAT	3 cut(s)	1459, 1635, 1831
NspI	RCATGY	2 cut(s)	1687, 2020
NspV	TTCGAA	3 cut(s)	687, 746, 1089
OliI	CACNNNNGTG	2 cut(s)	324, 950
PagI	TCATGA	3 cut(s)	76, 799, 1077
PciI	ACATGT	1 cut(s)	1683
PfeI	GAWTC	6 cut(s)	407, 666, 1074, 1217, 1591, 2099
PkrI	GCNGC	7 cut(s)	85, 915, 1045, 1261, 1264, 1471, 1886
PleI	GAGTC	1 cut(s)	1075
PmaCI	CACGTG	1 cut(s)	1142
PmlI	CACGTG	1 cut(s)	1142
PpsI	GAGTC	1 cut(s)	1075
Ppu21I	YACGTR	1 cut(s)	1142
PpuMI	RGGWCCY	1 cut(s)	607
PscI	ACATGT	1 cut(s)	1683
PshBI	ATTAAT	2 cut(s)	1274, 1865
Psp5II	RGGWCCY	1 cut(s)	607
Psp6I	CCWGG	2 cut(s)	502, 583
PspCI	CACGTG	1 cut(s)	1142
PspGI	CCWGG	2 cut(s)	502, 583
PspN4I	GGNNCC	4 cut(s)	608, 609, 905, 1872
PspPI	GGNCC	6 cut(s)	571, 587, 607, 657, 1128, 1519
PspPPI	RGGWCCY	1 cut(s)	607
PstNI	CAGNNNCTG	1 cut(s)	463
PsuI	RGATCY	1 cut(s)	1870
RsaI	GTAC	6 cut(s)	379, 462, 718, 1249, 1672, 2053
RsaNI	GTAC	6 cut(s)	378, 461, 717, 1248, 1671, 2052
RseI	CAYNNNNRTG	4 cut(s)	324, 531, 939, 950
SatI	GCNGC	7 cut(s)	84, 914, 1044, 1260, 1263, 1470, 1885
Sau3AI	GATC	7 cut(s)	331, 871, 1801, 1870, 1900, 1957, 2093
Sau96I	GGNCC	6 cut(s)	571, 587, 607, 657, 1128, 1519
ScaI	AGTACT	1 cut(s)	379
SchI	GAGTC	1 cut(s)	1075
ScrFI	CCNGG	3 cut(s)	350, 504, 585
SfaNI	GCATC	3 cut(s)	1296, 1466, 1904
SfcI	CTRYAG	2 cut(s)	486, 1735
SfuI	TTCGAA	3 cut(s)	687, 746, 1089
SinI	GGWCC	5 cut(s)	571, 607, 657, 1128, 1519
SmiMI	CAYNNNNRTG	4 cut(s)	324, 531, 939, 950
SsiI	CCGC	4 cut(s)	13, 644, 913, 1719
SspMI	CTAG	7 cut(s)	104, 203, 381, 612, 783, 1364, 1563
StyD4I	CCNGG	3 cut(s)	348, 502, 583
StyI	CCWWGG	2 cut(s)	132, 1701
TaaI	ACNGT	9 cut(s)	368, 377, 465, 1027, 1067, 1232, 1739, 1881, 1908
TaiI	ACGT	4 cut(s)	622, 643, 1144, 2140
TaqI	TCGA	4 cut(s)	687, 746, 1089, 1960
TatI	WGTACW	1 cut(s)	377
TauI	GCSGC	1 cut(s)	916
TfiI	GAWTC	6 cut(s)	407, 666, 1074, 1217, 1591, 2099
TscAI	CASTG	5 cut(s)	667, 881, 898, 1030, 1884
TseFI	GTSAC	4 cut(s)	941, 1061, 1142, 2019
TseI	GCWGC	6 cut(s)	83, 1043, 1259, 1262, 1469, 1884
Tsp45I	GTSAC	4 cut(s)	941, 1061, 1142, 2019
TspRI	CASTG	5 cut(s)	667, 881, 898, 1030, 1884
VpaK11BI	GGWCC	5 cut(s)	571, 607, 657, 1128, 1519
VspI	ATTAAT	2 cut(s)	1274, 1865
XapI	RAATTY	7 cut(s)	184, 415, 689, 833, 1109, 1170, 1710
XceI	RCATGY	2 cut(s)	1687, 2020
XmiI	GTMKAC	1 cut(s)	1734
XspI	CTAG	7 cut(s)	104, 203, 381, 612, 783, 1364, 1563
ZrmI	AGTACT	1 cut(s)	379
Zsp2I	ATGCAT	3 cut(s)	1459, 1635, 1831

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.