Rorug05G0085700

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
7375258 .. 7375734
477 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0085700.1

Sequence Viewer

Length: 477 bp
ATGTCAACCATCAGAGAAATATTCTTTACTTATTCCGATGCACGGCAAACCAACGAAAACACTGAATCCTACCTCGCCCACTTACTCTTCTTCAATCCACAGGACATAGTTCCCATCAGATTCAAGATTGTGGAGAAATTCAAAAGCGGCTGTGTCTCAGATTCTGAAGATGACGATCCTGTTTCTTACCCAACAGACATTTTCTTCGAAGAGATAGGATCCATAGTTGCAAGAGAAGAAGTCACTCTAGATTATTCTCTCTCGAGTCTCAAGCAAAAATCTGAGAGGAGTTCGCATAAGGAACACTTCGGCTACATTCTTTCCAGATCTTTGGGTGTCTCGGAAGAGTTGCATCCGCCTATCATTGAGAAACTCTTTGAGGTAGTTGATGATGAAGACGCTGTGCCCTTGCTTCCTATTGAAGTGGTTATCACTAACGTGACTTTGGCTTTGACTTCAAGGTGGTTAGAGAATTAG

Protein Analysis

158

Amino Acids

18.11

Weight (kDa)

4.52

Isoelectric Point (pI)

53.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 147, 356
AclWI GGATC 3 cut(s) 170, 213, 226
AcsI RAATTY 1 cut(s) 137
AcuI CTGAAG 1 cut(s) 186
AfiI CCNNNNNNNGG 1 cut(s) 42
AgsI TTSAA 5 cut(s) 94, 124, 142, 422, 459
AleI CACNNNNGTG 1 cut(s) 437
Alw26I GTCTC 3 cut(s) 160, 272, 343
AlwI GGATC 3 cut(s) 170, 213, 226
AlwNI CAGNNNCTG 1 cut(s) 164
Ama87I CYCGRG 1 cut(s) 262
ApoI RAATTY 1 cut(s) 137
ArsI GACNNNNNNTTYG 4 cut(s) 188, 220, 433, 465
AsuII TTCGAA 1 cut(s) 207
AvaI CYCGRG 1 cut(s) 262
BaeGI GKGCMC 1 cut(s) 408
BamHI GGATCC 1 cut(s) 218
BbsI GAAGAC 1 cut(s) 402
BccI CCATC 2 cut(s) 17, 122
BceAI ACGGC 1 cut(s) 59
BcoDI GTCTC 3 cut(s) 160, 272, 343
BfaI CTAG 1 cut(s) 248
BglII AGATCT 1 cut(s) 326
BisI GCNGC 1 cut(s) 148
BlsI GCNGC 1 cut(s) 149
BmeT110I CYCGRG 1 cut(s) 262
BmiI GGNNCC 1 cut(s) 220
BmsI GCATC 2 cut(s) 28, 361
BpiI GAAGAC 1 cut(s) 402
Bpu14I TTCGAA 1 cut(s) 207
BpuEI CTTGAG 1 cut(s) 254
BsaBI GATNNNNATC 1 cut(s) 174
Bsc4I CCNNNNNNNGG 1 cut(s) 42
Bse8I GATNNNNATC 1 cut(s) 174
BseGI GGATG 1 cut(s) 352
BseJI GATNNNNATC 1 cut(s) 174
BseLI CCNNNNNNNGG 1 cut(s) 42
BseMII CTCAG 2 cut(s) 171, 273
BseRI GAGGAG 1 cut(s) 301
BseSI GKGCMC 1 cut(s) 408
BsiHKCI CYCGRG 1 cut(s) 262
BslI CCNNNNNNNGG 1 cut(s) 42
BsmAI GTCTC 3 cut(s) 160, 272, 343
BsoBI CYCGRG 1 cut(s) 262
Bsp119I TTCGAA 1 cut(s) 207
Bsp1286I GDGCHC 1 cut(s) 408
Bsp143I GATC 3 cut(s) 175, 218, 326
BspACI CCGC 2 cut(s) 147, 356
BspCNI CTCAG 2 cut(s) 170, 274
BspLI GGNNCC 1 cut(s) 220
BspPI GGATC 3 cut(s) 170, 213, 226
BspT104I TTCGAA 1 cut(s) 207
BssMI GATC 3 cut(s) 175, 218, 326
Bst6I CTCTTC 3 cut(s) 92, 204, 339
BstBI TTCGAA 1 cut(s) 207
BstDEI CTNAG 2 cut(s) 157, 282
BstF5I GGATG 1 cut(s) 352
BstKTI GATC 3 cut(s) 178, 221, 329
BstMAI GTCTC 3 cut(s) 160, 272, 343
BstMBI GATC 3 cut(s) 175, 218, 326
BstSLI GKGCMC 1 cut(s) 408
BstV2I GAAGAC 1 cut(s) 402
BstX2I RGATCY 2 cut(s) 218, 326
BstXI CCANNNNNNTGG 1 cut(s) 331
BstYI RGATCY 2 cut(s) 218, 326
BtsCI GGATG 1 cut(s) 352
BtsIMutI CAGTG 1 cut(s) 60
CaiI CAGNNNCTG 1 cut(s) 164
CseI GACGC 1 cut(s) 407
CviJI RGCY 3 cut(s) 150, 312, 449
CviKI_1 RGCY 3 cut(s) 150, 312, 449
DdeI CTNAG 2 cut(s) 157, 282
DpnI GATC 3 cut(s) 177, 220, 328
DpnII GATC 3 cut(s) 175, 218, 326
Eam1104I CTCTTC 3 cut(s) 92, 204, 339
EarI CTCTTC 3 cut(s) 92, 204, 339
EciI GGCGGA 1 cut(s) 345
Eco57I CTGAAG 1 cut(s) 186
Eco88I CYCGRG 1 cut(s) 262
FaiI YATR 3 cut(s) 107, 224, 297
FalI AAGNNNNNCTT 2 cut(s) 290, 322
Fnu4HI GCNGC 1 cut(s) 148
FokI GGATG 1 cut(s) 339
Fsp4HI GCNGC 1 cut(s) 148
FspBI CTAG 1 cut(s) 248
GluI GCNGC 1 cut(s) 148
HgaI GACGC 1 cut(s) 407
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 4 cut(s) 65, 120, 161, 265
Hpy166II GTNNAC 1 cut(s) 6
Hpy188I TCNGA 7 cut(s) 14, 37, 119, 160, 166, 283, 343
Hpy188III TCNNGA 4 cut(s) 124, 248, 262, 324
Hpy8I GTNNAC 1 cut(s) 6
HpyCH4IV ACGT 1 cut(s) 438
HpyCH4V TGCA 3 cut(s) 41, 230, 352
HpyF3I CTNAG 2 cut(s) 157, 282
HpySE526I ACGT 1 cut(s) 438
Kzo9I GATC 3 cut(s) 175, 218, 326
LpnPI CCDG 3 cut(s) 86, 192, 337
LweI GCATC 2 cut(s) 28, 361
MaeI CTAG 1 cut(s) 248
MaeII ACGT 1 cut(s) 438
MaeIII GTNAC 2 cut(s) 241, 439
MalI GATC 3 cut(s) 177, 220, 328
MboI GATC 3 cut(s) 175, 218, 326
MboII GAAGA 8 cut(s) 79, 82, 179, 196, 221, 248, 356, 407
MflI RGATCY 2 cut(s) 218, 326
MhlI GDGCHC 1 cut(s) 408
MluCI AATT 2 cut(s) 137, 472
MlyI GAGTC 1 cut(s) 274
MnlI CCTC 3 cut(s) 83, 279, 373
MslI CAYNNNNRTG 1 cut(s) 437
NdeII GATC 3 cut(s) 175, 218, 326
NlaIV GGNNCC 1 cut(s) 220
NmuCI GTSAC 2 cut(s) 241, 439
NspV TTCGAA 1 cut(s) 207
OliI CACNNNNGTG 1 cut(s) 437
PaeR7I CTCGAG 1 cut(s) 262
PfeI GAWTC 3 cut(s) 65, 120, 161
PkrI GCNGC 1 cut(s) 149
PleI GAGTC 1 cut(s) 273
PpsI GAGTC 1 cut(s) 273
PspN4I GGNNCC 1 cut(s) 220
PstNI CAGNNNCTG 1 cut(s) 164
PsuI RGATCY 2 cut(s) 218, 326
RseI CAYNNNNRTG 1 cut(s) 437
SatI GCNGC 1 cut(s) 148
Sau3AI GATC 3 cut(s) 175, 218, 326
SchI GAGTC 1 cut(s) 274
SduI GDGCHC 1 cut(s) 408
SetI ASST 4 cut(s) 75, 384, 441, 464
SfaNI GCATC 2 cut(s) 28, 361
Sfr274I CTCGAG 1 cut(s) 262
SfuI TTCGAA 1 cut(s) 207
SlaI CTCGAG 1 cut(s) 262
SmiMI CAYNNNNRTG 1 cut(s) 437
SmlI CTYRAG 2 cut(s) 262, 269
SmoI CTYRAG 2 cut(s) 262, 269
Sse9I AATT 2 cut(s) 137, 472
SsiI CCGC 2 cut(s) 147, 356
SspI AATATT 1 cut(s) 21
SspMI CTAG 1 cut(s) 248
TaiI ACGT 1 cut(s) 441
TaqI TCGA 2 cut(s) 207, 263
TasI AATT 2 cut(s) 137, 472
TauI GCSGC 1 cut(s) 150
TfiI GAWTC 3 cut(s) 65, 120, 161
TscAI CASTG 1 cut(s) 67
TseFI GTSAC 2 cut(s) 241, 439
Tsp45I GTSAC 2 cut(s) 241, 439
TspDTI ATGAA 1 cut(s) 408
TspRI CASTG 1 cut(s) 67
XapI RAATTY 1 cut(s) 137
XbaI TCTAGA 1 cut(s) 247
XhoI CTCGAG 1 cut(s) 262
XspI CTAG 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.