Rroxscaffold_1G00053680

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
74883247 .. 74886575
3329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00053680.1

Sequence Viewer

Length: 2457 bp
ATGGTTAATGTGATGATCATGTTTGCTGGTTTTCAAGAACATCAAGGGAAAGCAAAGTATCTTCTGATCATCAACCATGGTTTTAGGTTTGACCAACTCTTAATTTTCTTCCTGATCATTCTTTCAAGCTTGTCGAATTGTCATGTTGCGGCTGCAGCAGACAATATTGGGGACAGACTCAAAATAGGCGACACTCTCAATTCCTCAAGCGCTTTAGTTTCCACCACTGGGAAGTTCACTTTGCTTTTCTTGCCCCTCAGTTCAAGTTCCAACTACAGCTATCTATATATTAGCCGGTACAATGTAAGTGGTGCGAATAGGGCTTGGGTTGGCAACCGAGACTCGCCTGTTCTATACCCTTTTGGAGTTCTTACCTTGGACTCCAACAACACATTAAAAATCATTACAAACAACGAAGGTGGCGGTGGCGATCCTCCTATAGTGCTTGGTTCCGCGCCAAAAAGTAGTAGTAATGTTGCGGCTGCTCTGTCGGATTCTGGCAATTTTATCCTACAAGAGTTTAACTCCGATGGATCAACGAAGCAGGTGTGGTGGCAAAGTTTTGATTATCCAGCAGATACCTTTTTACCAGGCATGAAGTTAGGTGTCAACCATAGCAACGGGCACATTTGGTCTCTTACGTCATGGACATCCGTTAACTACCCACCGCCGGGGCCTTTCATCCTAGATTGGGACCCAACTGCCCGCCAATTGGAAATTCGGAGAGAAGGGGTGGTTTATTGGAGAAGCGGAAACTATAGTGCTACAAACAACAGATTCCAAAACATTTTGCCGAGTGCAACGGTTAGCTACAAGTTTAGCATTGTTTCAAATGAGAATGAAGACTACCTCACTTACACTTCTGAAGATGGTGCATATGAGTTACCAGAATGGATTCTAAATTATTATGGGAAGCTTTTTAATTATTATGGATCGGGAATTGATATTGCACGAGCAGATCAGTGTGGAGGCTACAACACAGATGGAGTAGGGTGCCAGACTACTGGCCGGCCAACTACTTGTATGGCGGATTTCGGCAGTCCATTTGGGCTAAAAAAGGTTCCTTTAAACCAATCACCACGAGTTCAACTTCAAGATGCCCATACTCGCTCAACTTTGTATCCAATGGAAGTCACAGTGATACTAGTATTGACTGTAAGAATACTTGTTTGCAAAACTGTGACTGCCTTGGATTCGACTTTCTATTTGACAATCAGACTGGATGCCGATTTTGGAGTGTGGACTGTGTATTCGTTGAAAACCGCACTCAACCTGAATATTATTGGTTACTCCCTAGGTGCAACGCATAAATGGATTTGGATTGGGGTTGCTATTAGTGCTGCTCTAGTGATAATGGCCTTTTCCATCTTGTGCTATCTACGAAGAAGAAGAAGAAAATCTAAACTTTCAGGTGAGGGTGAGATCGACCAGAATCAATTGCTCAACTTGAGGAGCTCTAGGAGGCCTACTGATTTGAATGGACTTCAAAATGATGGAAAGATGGGACGTGATTTGAGCGTATTTAGCTATGCATCTGTAATGGCTGCCACAATCAACTTCTCTGAAGAAAACAAGCTTGGAGAAGGGGGCTTTGGACCTGTTTATAAAGGGAAATTGGCAACGGGACAAGAAGTAGCTGTGAAGAGGCTTTCAAAATGTTCAGGGCAAGGAACACTAGAGTTTAAGAATGAATTGATCCTCATACATGAACTTCAGCATACAAACCTTGTCCAGCTTTTTGGATTTTGCATTCACGATTCAATCAGAGGTGTTTTTCTAGATTGGAGCAAGCGTTTCAGCATAATTGAAGGAATCACTCAAGGATTGCTTTATTTGCACAAATTCTCAAGAACAAGAGTAATTCATAGAGATCTAAAAGCTAGTAATGTACTACTTGATGAAAATATGAACCCCAAAATTTCAGATTTTGGTATGGCAAGGATTCTCTCCATTAATGACCTGGAAGCAAATACTAGTAGGATTGTTGGGACGCGTGGTTACATGCCTCCTGAGTATGCAATGGAAGGAATTTTCTCTACAAAATCCGATGTCTACAGTTTTGGAGTGTTAGTGCTTGAAATCATAAGTGGTAGGAGAAATAATAGCTTCTACAATGATGGTCGAGCCATCAATTTAGTAGGATATGCATGGGAGTTGTGGAAAGAAGGCACAGGGCTACAACTAATGGATCCAACACTAGCTGATTCGTGTACTAACAAGGATCAACTGTTAAGATGCGTTCAAGTTGGTCTTCTATGCGTGGAAGATAGTGCAGCGAATCGACCTACCATGTCAGATGTGCTCTCCGCGTTGACAAATGAAAGCTCACCATTACCTGCACCTACAAAGCCAGCATTTTCTACAGAAAGATATGCGATCACCAGTGGTATAGCTGAAAAGGAACCACAAATTTTATCTGTAAATGATCTGACCATTTCTGATTGTGATGGACGTTAA

Protein Analysis

818

Amino Acids

90.54

Weight (kDa)

6.66

Isoelectric Point (pI)

42.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 109 - 216 3.8e-23 D-mannose binding lectin
Pkinase PF00069 521 - 587 6e-08 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 523 - 586 1.4e-09 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 595 - 700 1.4e-23 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 599 - 699 6.3e-24 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1605
AarI CACCTGC 1 cut(s) 535
Acc36I ACCTGC 2 cut(s) 535, 2344
AccB1I GGYRCC 1 cut(s) 993
AccI GTMKAC 1 cut(s) 2052
AccII CGCG 3 cut(s) 455, 1993, 2309
AclWI GGATC 7 cut(s) 425, 541, 940, 1690, 2183, 2196, 2229
AcoI YGGCCR 2 cut(s) 1006, 1010
AcsI RAATTY 5 cut(s) 717, 1841, 1917, 2028, 2409
AcuI CTGAAG 3 cut(s) 885, 1584, 1697
AfaI GTAC 3 cut(s) 299, 1890, 2212
AfeI AGCGCT 1 cut(s) 211
AfiI CCNNNNNNNGG 5 cut(s) 228, 670, 671, 691, 712
AflIII ACRYGT 1 cut(s) 1991
AhlI ACTAGT 2 cut(s) 1144, 1973
AjiI CACGTC 1 cut(s) 1508
AjnI CCWGG 2 cut(s) 589, 1959
AjuI GAANNNNNNNTTGG 6 cut(s) 702, 734, 1560, 1575, 1592, 1607
Alw21I GWGCWC 2 cut(s) 1457, 2304
Alw26I GTCTC 2 cut(s) 333, 639
AlwI GGATC 7 cut(s) 425, 541, 940, 1690, 2183, 2196, 2229
Aor51HI AGCGCT 1 cut(s) 211
AoxI GGCC 5 cut(s) 674, 1006, 1010, 1356, 1463
ApeKI GCWGC 6 cut(s) 152, 155, 482, 1340, 1544, 2273
ApoI RAATTY 5 cut(s) 717, 1841, 1917, 2028, 2409
ArsI GACNNNNNNTTYG 4 cut(s) 1189, 1221, 1234, 1266
AseI ATTAAT 1 cut(s) 1953
Asp700I GAANNNNTTC 1 cut(s) 894
AspA2I CCTAGG 1 cut(s) 1294
AspLEI GCGC 2 cut(s) 212, 457
AspS9I GGNCC 3 cut(s) 674, 694, 1595
AsuC2I CCSGG 1 cut(s) 672
AsuHPI GGTGA 5 cut(s) 1068, 1424, 1430, 2319, 2371
AvaII GGWCC 2 cut(s) 694, 1595
AvrII CCTAGG 1 cut(s) 1294
BaeGI GKGCMC 1 cut(s) 627
BamHI GGATCC 1 cut(s) 2188
BanI GGYRCC 1 cut(s) 993
BanII GRGCYC 1 cut(s) 1457
BauI CACGAG 2 cut(s) 951, 1080
BbsI GAAGAC 2 cut(s) 849, 2243
Bbv12I GWGCWC 2 cut(s) 1457, 2304
BbvI GCAGC 6 cut(s) 139, 167, 469, 1327, 1531, 2285
BccI CCATC 9 cut(s) 524, 863, 977, 1373, 1487, 1495, 2111, 2135, 2441
BciT130I CCWGG 2 cut(s) 591, 1961
BciVI GTATCC 1 cut(s) 1131
BclI TGATCA 3 cut(s) 15, 66, 114
BcnI CCSGG 1 cut(s) 672
BcoDI GTCTC 2 cut(s) 333, 639
BcuI ACTAGT 2 cut(s) 1144, 1973
BfmI CTRYAG 6 cut(s) 153, 274, 438, 757, 2053, 2361
BfoI RGCGCY 1 cut(s) 213
BfuAI ACCTGC 2 cut(s) 535, 2344
BfuI GTATCC 1 cut(s) 1131
BglII AGATCT 1 cut(s) 1870
BisI GCNGC 8 cut(s) 150, 153, 156, 480, 483, 1341, 1545, 2274
BlnI CCTAGG 1 cut(s) 1294
BlsI GCNGC 8 cut(s) 151, 154, 157, 481, 484, 1342, 1546, 2275
Bme1390I CCNGG 3 cut(s) 591, 672, 1961
Bme18I GGWCC 2 cut(s) 694, 1595
BmgBI CACGTC 1 cut(s) 1508
BmgT120I GGNCC 3 cut(s) 674, 694, 1595
BmiI GGNNCC 8 cut(s) 451, 675, 695, 696, 995, 1062, 2190, 2403
BmrFI CCNGG 3 cut(s) 591, 672, 1961
BmrI ACTGGG 1 cut(s) 237
BmsI GCATC 4 cut(s) 1087, 1213, 1541, 2225
BmuI ACTGGG 1 cut(s) 237
BpiI GAAGAC 2 cut(s) 849, 2243
BplI GAGNNNNNCTC 2 cut(s) 509, 541
BpuEI CTTGAG 4 cut(s) 190, 1468, 1803, 1831
BpuMI CCSGG 1 cut(s) 672
BsaI GGTCTC 1 cut(s) 639
BsaJI CCNNGG 5 cut(s) 76, 375, 671, 1188, 1294
BsaXI ACNNNNNCTCC 4 cut(s) 1777, 1807, 2055, 2085
Bsc4I CCNNNNNNNGG 5 cut(s) 228, 670, 671, 691, 712
Bse118I RCCGGY 2 cut(s) 294, 1008
Bse1I ACTGG 4 cut(s) 232, 1009, 1224, 2382
Bse3DI GCAATG 1 cut(s) 2025
BseBI CCWGG 2 cut(s) 591, 1961
BseDI CCNNGG 5 cut(s) 76, 375, 671, 1188, 1294
BseGI GGATG 3 cut(s) 650, 681, 1228
BseLI CCNNNNNNNGG 5 cut(s) 228, 670, 671, 691, 712
BseMI GCAATG 1 cut(s) 2025
BseMII CTCAG 2 cut(s) 271, 2001
BseNI ACTGG 4 cut(s) 232, 1009, 1224, 2382
BseRI GAGGAG 1 cut(s) 1465
BseSI GKGCMC 1 cut(s) 627
BseXI GCAGC 6 cut(s) 139, 167, 469, 1327, 1531, 2285
BsgI GTGCAG 2 cut(s) 2292, 2322
Bsh1236I CGCG 3 cut(s) 455, 1993, 2309
BshFI GGCC 5 cut(s) 676, 1008, 1012, 1358, 1465
BshNI GGYRCC 1 cut(s) 993
BsiHKAI GWGCWC 2 cut(s) 1457, 2304
BsiSI CCGG 3 cut(s) 295, 671, 1009
BslFI GGGAC 5 cut(s) 185, 707, 1518, 1638, 2002
BslI CCNNNNNNNGG 5 cut(s) 228, 670, 671, 691, 712
BsmAI GTCTC 2 cut(s) 333, 639
BsmFI GGGAC 5 cut(s) 185, 707, 1518, 1638, 2002
BsmI GAATGC 1 cut(s) 1749
BsnI GGCC 5 cut(s) 676, 1008, 1012, 1358, 1465
Bso31I GGTCTC 1 cut(s) 639
Bsp1286I GDGCHC 3 cut(s) 627, 1457, 2304
Bsp19I CCATGG 1 cut(s) 76
BspANI GGCC 5 cut(s) 676, 1008, 1012, 1358, 1465
BspCNI CTCAG 2 cut(s) 270, 2002
BspFNI CGCG 3 cut(s) 455, 1993, 2309
BspLI GGNNCC 8 cut(s) 451, 675, 695, 696, 995, 1062, 2190, 2403
BspMAI CTGCAG 1 cut(s) 157
BspMI ACCTGC 2 cut(s) 535, 2344
BspPI GGATC 7 cut(s) 425, 541, 940, 1690, 2183, 2196, 2229
BspT107I GGYRCC 1 cut(s) 993
BspTNI GGTCTC 1 cut(s) 639
BsrDI GCAATG 1 cut(s) 2025
BsrFI RCCGGY 2 cut(s) 294, 1008
BsrI ACTGG 4 cut(s) 232, 1009, 1224, 2382
BssAI RCCGGY 2 cut(s) 294, 1008
BssECI CCNNGG 5 cut(s) 76, 375, 671, 1188, 1294
BssSI CACGAG 2 cut(s) 951, 1080
BssT1I CCWWGG 4 cut(s) 76, 375, 1188, 1294
Bst2BI CACGAG 2 cut(s) 951, 1080
Bst2UI CCWGG 2 cut(s) 591, 1961
Bst4CI ACNGT 7 cut(s) 805, 1138, 1156, 1180, 1246, 2057, 2229
Bst6I CTCTTC 1 cut(s) 1637
BstC8I GCNNGC 4 cut(s) 706, 1010, 1790, 2352
BstDEI CTNAG 2 cut(s) 257, 2010
BstDSI CCRYGG 1 cut(s) 76
BstF5I GGATG 3 cut(s) 650, 681, 1228
BstFNI CGCG 3 cut(s) 455, 1993, 2309
BstH2I RGCGCY 1 cut(s) 213
BstHHI GCGC 2 cut(s) 212, 457
BstMAI GTCTC 2 cut(s) 333, 639
BstMWI GCNNNNNNNGC 6 cut(s) 155, 250, 320, 1337, 1524, 1834
BstNI CCWGG 2 cut(s) 591, 1961
BstNSI RCATGY 1 cut(s) 2005
BstSCI CCNGG 3 cut(s) 589, 670, 1959
BstSFI CTRYAG 6 cut(s) 153, 274, 438, 757, 2053, 2361
BstSLI GKGCMC 1 cut(s) 627
BstUI CGCG 3 cut(s) 455, 1993, 2309
BstV1I GCAGC 6 cut(s) 139, 167, 469, 1327, 1531, 2285
BstV2I GAAGAC 2 cut(s) 849, 2243
BstX2I RGATCY 2 cut(s) 1870, 2188
BstXI CCANNNNNNTGG 2 cut(s) 1004, 1739
BstYI RGATCY 2 cut(s) 1870, 2188
BsuI GTATCC 1 cut(s) 1131
BsuRI GGCC 5 cut(s) 676, 1008, 1012, 1358, 1465
BtgI CCRYGG 1 cut(s) 76
BtrI CACGTC 1 cut(s) 1508
BtsCI GGATG 3 cut(s) 650, 681, 1228
BtsIMutI CAGTG 4 cut(s) 225, 968, 1143, 2389
BveI ACCTGC 2 cut(s) 535, 2344
Cac8I GCNNGC 4 cut(s) 706, 1010, 1790, 2352
CfoI GCGC 2 cut(s) 212, 457
Cfr10I RCCGGY 2 cut(s) 294, 1008
Cfr13I GGNCC 3 cut(s) 674, 694, 1595
CseI GACGC 1 cut(s) 1999
Csp6I GTAC 3 cut(s) 298, 1889, 2211
CspCI CAANNNNNGTGG 4 cut(s) 289, 324, 400, 435
CviAII CATG 9 cut(s) 19, 77, 143, 595, 645, 1706, 2002, 2148, 2290
CviQI GTAC 3 cut(s) 298, 1889, 2211
DdeI CTNAG 2 cut(s) 257, 2010
DraI TTTAAA 1 cut(s) 1068
EaeI YGGCCR 2 cut(s) 1006, 1010
Eam1104I CTCTTC 1 cut(s) 1637
EarI CTCTTC 1 cut(s) 1637
EciI GGCGGA 1 cut(s) 1043
Ecl136II GAGCTC 1 cut(s) 1455
Eco130I CCWWGG 4 cut(s) 76, 375, 1188, 1294
Eco147I AGGCCT 1 cut(s) 1465
Eco24I GRGCYC 1 cut(s) 1457
Eco31I GGTCTC 1 cut(s) 639
Eco47I GGWCC 2 cut(s) 694, 1595
Eco47III AGCGCT 1 cut(s) 211
Eco53kI GAGCTC 1 cut(s) 1455
Eco57I CTGAAG 3 cut(s) 885, 1584, 1697
EcoICRI GAGCTC 1 cut(s) 1455
EcoO109I RGGNCCY 2 cut(s) 674, 694
EcoRII CCWGG 2 cut(s) 589, 1959
EcoT14I CCWWGG 4 cut(s) 76, 375, 1188, 1294
EcoT22I ATGCAT 2 cut(s) 1534, 2149
EcoT38I GRGCYC 1 cut(s) 1457
ErhI CCWWGG 4 cut(s) 76, 375, 1188, 1294
FaeI CATG 9 cut(s) 22, 80, 146, 598, 648, 1709, 2005, 2151, 2293
FalI AAGNNNNNCTT 4 cut(s) 1812, 1844, 2235, 2267
FaqI GGGAC 5 cut(s) 185, 707, 1518, 1638, 2002
FatI CATG 9 cut(s) 18, 76, 142, 594, 644, 1705, 2001, 2147, 2289
FauI CCCGC 1 cut(s) 713
FauNDI CATATG 1 cut(s) 877
FbaI TGATCA 3 cut(s) 15, 66, 114
FblI GTMKAC 1 cut(s) 2052
Fnu4HI GCNGC 8 cut(s) 150, 153, 156, 480, 483, 1341, 1545, 2274
FokI GGATG 3 cut(s) 637, 668, 1235
FriOI GRGCYC 1 cut(s) 1457
FseI GGCCGGCC 1 cut(s) 1012
Fsp4HI GCNGC 8 cut(s) 150, 153, 156, 480, 483, 1341, 1545, 2274
GlaI GCGC 2 cut(s) 211, 456
GluI GCNGC 8 cut(s) 150, 153, 156, 480, 483, 1341, 1545, 2274
HaeII RGCGCY 1 cut(s) 213
HaeIII GGCC 5 cut(s) 676, 1008, 1012, 1358, 1465
HapII CCGG 3 cut(s) 295, 671, 1009
HgaI GACGC 1 cut(s) 1999
HhaI GCGC 2 cut(s) 212, 457
Hin1II CATG 9 cut(s) 22, 80, 146, 598, 648, 1709, 2005, 2151, 2293
Hin6I GCGC 2 cut(s) 210, 455
HinP1I GCGC 2 cut(s) 210, 455
HincII GTYRAC 3 cut(s) 610, 658, 2313
HindII GTYRAC 3 cut(s) 610, 658, 2313
HindIII AAGCTT 3 cut(s) 127, 914, 1574
HpaI GTTAAC 1 cut(s) 658
HpaII CCGG 3 cut(s) 295, 671, 1009
HphI GGTGA 5 cut(s) 1068, 1424, 1430, 2319, 2371
Hpy166II GTNNAC 7 cut(s) 237, 610, 658, 1242, 2053, 2211, 2313
Hpy188III TCNNGA 8 cut(s) 35, 112, 936, 1094, 1754, 1778, 1848, 2009
Hpy8I GTNNAC 7 cut(s) 237, 610, 658, 1242, 2053, 2211, 2313
HpyAV CCTTC 6 cut(s) 410, 722, 1577, 1802, 2018, 2159
HpyCH4III ACNGT 7 cut(s) 805, 1138, 1156, 1180, 1246, 2057, 2229
HpyCH4IV ACGT 3 cut(s) 641, 1507, 2452
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 250, 320, 1337, 1524, 1834
HpyF3I CTNAG 2 cut(s) 257, 2010
HpySE526I ACGT 3 cut(s) 641, 1507, 2452
Hsp92II CATG 9 cut(s) 22, 80, 146, 598, 648, 1709, 2005, 2151, 2293
HspAI GCGC 2 cut(s) 210, 455
KflI GGGWCCC 1 cut(s) 694
KroI GCCGGC 1 cut(s) 1008
KroNI GCCGGC 1 cut(s) 1010
Ksp22I TGATCA 3 cut(s) 15, 66, 114
KspAI GTTAAC 1 cut(s) 658
LmnI GCTCC 2 cut(s) 1452, 1785
Lsp1109I GCAGC 6 cut(s) 139, 167, 469, 1327, 1531, 2285
LweI GCATC 4 cut(s) 1087, 1213, 1541, 2225
MaeII ACGT 3 cut(s) 641, 1507, 2452
MaeIII GTNAC 5 cut(s) 882, 1132, 1180, 1286, 1997
MfeI CAATTG 2 cut(s) 710, 1436
MflI RGATCY 2 cut(s) 1870, 2188
MhlI GDGCHC 3 cut(s) 627, 1457, 2304
MluI ACGCGT 1 cut(s) 1991
MlyI GAGTC 3 cut(s) 171, 335, 374
MmeI TCCRAC 4 cut(s) 294, 408, 471, 2216
Mph1103I ATGCAT 2 cut(s) 1534, 2149
MroNI GCCGGC 1 cut(s) 1008
MroXI GAANNNNTTC 1 cut(s) 894
MspI CCGG 3 cut(s) 295, 671, 1009
MspR9I CCNGG 3 cut(s) 591, 672, 1961
MunI CAATTG 2 cut(s) 710, 1436
Mva1269I GAATGC 1 cut(s) 1749
MvaI CCWGG 2 cut(s) 591, 1961
MvnI CGCG 3 cut(s) 455, 1993, 2309
MwoI GCNNNNNNNGC 6 cut(s) 155, 250, 320, 1337, 1524, 1834
NaeI GCCGGC 1 cut(s) 1010
NciI CCSGG 1 cut(s) 672
NcoI CCATGG 1 cut(s) 76
NdeI CATATG 1 cut(s) 877
NgoMIV GCCGGC 1 cut(s) 1008
NlaIII CATG 9 cut(s) 22, 80, 146, 598, 648, 1709, 2005, 2151, 2293
NlaIV GGNNCC 8 cut(s) 451, 675, 695, 696, 995, 1062, 2190, 2403
NmeAIII GCCGAG 1 cut(s) 819
NmuCI GTSAC 2 cut(s) 1132, 1180
NsiI ATGCAT 2 cut(s) 1534, 2149
NspI RCATGY 1 cut(s) 2005
PaqCI CACCTGC 1 cut(s) 535
PceI AGGCCT 1 cut(s) 1465
PctI GAATGC 1 cut(s) 1749
PdiI GCCGGC 1 cut(s) 1010
PdmI GAANNNNTTC 1 cut(s) 894
PkrI GCNGC 8 cut(s) 151, 154, 157, 481, 484, 1342, 1546, 2275
PleI GAGTC 3 cut(s) 171, 335, 374
PpsI GAGTC 3 cut(s) 171, 335, 374
PpuMI RGGWCCY 1 cut(s) 694
PshBI ATTAAT 1 cut(s) 1953
PsiI TTATAA 1 cut(s) 1605
Psp124BI GAGCTC 1 cut(s) 1457
Psp5II RGGWCCY 1 cut(s) 694
Psp6I CCWGG 2 cut(s) 589, 1959
PspGI CCWGG 2 cut(s) 589, 1959
PspN4I GGNNCC 8 cut(s) 451, 675, 695, 696, 995, 1062, 2190, 2403
PspPI GGNCC 3 cut(s) 674, 694, 1595
PspPPI RGGWCCY 1 cut(s) 694
PstI CTGCAG 1 cut(s) 157
PsuI RGATCY 2 cut(s) 1870, 2188
RigI GGCCGGCC 1 cut(s) 1012
RsaI GTAC 3 cut(s) 299, 1890, 2212
RsaNI GTAC 3 cut(s) 298, 1889, 2211
SacI GAGCTC 1 cut(s) 1457
SatI GCNGC 8 cut(s) 150, 153, 156, 480, 483, 1341, 1545, 2274
Sau96I GGNCC 3 cut(s) 674, 694, 1595
SchI GAGTC 3 cut(s) 171, 335, 374
ScrFI CCNGG 3 cut(s) 591, 672, 1961
SduI GDGCHC 3 cut(s) 627, 1457, 2304
SfaNI GCATC 4 cut(s) 1087, 1213, 1541, 2225
SfcI CTRYAG 6 cut(s) 153, 274, 438, 757, 2053, 2361
SinI GGWCC 2 cut(s) 694, 1595
SmlI CTYRAG 4 cut(s) 205, 1447, 1818, 1846
SmoI CTYRAG 4 cut(s) 205, 1447, 1818, 1846
SpeI ACTAGT 2 cut(s) 1144, 1973
SseBI AGGCCT 1 cut(s) 1465
SspI AATATT 2 cut(s) 166, 1279
SstI GAGCTC 1 cut(s) 1457
StuI AGGCCT 1 cut(s) 1465
StyD4I CCNGG 3 cut(s) 589, 670, 1959
StyI CCWWGG 4 cut(s) 76, 375, 1188, 1294
TaaI ACNGT 7 cut(s) 805, 1138, 1156, 1180, 1246, 2057, 2229
TaiI ACGT 3 cut(s) 644, 1510, 2455
TaqI TCGA 5 cut(s) 134, 1196, 1425, 2122, 2281
TatI WGTACW 2 cut(s) 1888, 2210
TauI GCSGC 2 cut(s) 152, 482
TscAI CASTG 4 cut(s) 232, 968, 1143, 2389
TseFI GTSAC 2 cut(s) 1132, 1180
TseI GCWGC 6 cut(s) 152, 155, 482, 1340, 1544, 2273
Tsp45I GTSAC 2 cut(s) 1132, 1180
TspDTI ATGAA 9 cut(s) 611, 670, 855, 1704, 1722, 1853, 1914, 1922, 2334
TspGWI ACGGA 1 cut(s) 643
TspRI CASTG 4 cut(s) 232, 968, 1143, 2389
VpaK11BI GGWCC 2 cut(s) 694, 1595
VspI ATTAAT 1 cut(s) 1953
XapI RAATTY 5 cut(s) 717, 1841, 1917, 2028, 2409
XbaI TCTAGA 1 cut(s) 1777
XceI RCATGY 1 cut(s) 2005
XcmI CCANNNNNNNNNTGG 1 cut(s) 1957
XmaJI CCTAGG 1 cut(s) 1294
XmiI GTMKAC 1 cut(s) 2052
XmnI GAANNNNTTC 1 cut(s) 894
Zsp2I ATGCAT 2 cut(s) 1534, 2149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.