MD05G1227300.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
36112663 .. 36115760
3098 bp
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UTR
Exon/CDS
Intron
MD05G1227300.v1.1.491

Sequence Viewer

Length: 2418 bp
ATGGTGACAAGTTTGATGATCAGAAACTCAATTTTCTTCCTCATTTTTGCATGCTTGTGGAGTCTTCATGATGGAAAGGACACGATGAAGCCTGGGGACACTCTCAACTCCTCGAGCTCCTTAGTGTCTGCGTCCGGGAAGTTTAATTTGAGCTTCGTTGTACAAACCATGGATTCGAACACCAGCTATATAGCGATCCTACGCAACAACCAACTCCCAAACAAAGCATGGATTGGGAACAGAAACTCTCCTATTCCGTACCCTTCTTCTCCACTTCTCACCTTTGACTTGAGCAACACTTTGAGAATTACATACCAAGGTGGAAACCCTATTGTGATTTACTCTCCTCCGAAAAATATTAGTAGTACTAATGCTTTTGAGGCTATCCTTTTGGATTCTGGCAATTTTGTGATACGGGAAGCGAGCTCAGTCAACGGATCAACCAACGGAGTTTTGTGGCAGAGTTTTGATTATCCCACAGACACATTTTTACCAGGCATGAAATTGGGGGTTGACCGCAGAAGTGGCAAGAATTGGTCACTTTTATCTTGGGCAACAAGCTTCAACCCTGCACCAGGGCCTTTGACCCTCGATTGGGACCCAAATGGGAAACAATTGAGAATCAAGCAGGGTGGGGTGGTTTATTGGACTAGCGGGGTCTTTGATGGTGGAAAATTTCCATTTATTTTTCCTGAAGTGTCCGAGCAGAGGTACAATTTTAGCATCATTTCGAACGAATATGAAGACTACCTCACTTACAGTTCTGTAGGTGACCCAAGTGATCCAGAGCCGGAATGGGTGCTATATAGCAGGGGGACACTTTTTGAATATGGAGCACAAGTTGCGATCACAAATGCACAGTACTGTGACGGATATAATGCAGTTGGAGGGTGCGTGAGAAGGGACCGGCCAAGCAATTGTACGGGAAAATTTGGTGATGAATTTGTGCAAAAGAATGGATACTTGAAGATCAAAGACTCTAGTAATACTTCAAGAGCCACCAGCTGGCACGTTGTGAGTAGTGTTGATTGTAAAGTTCTTTGCTGGCAAAATTGCAGCTGCCTTGGTTTCGACACTCCAGCAGATAATCAGTCTAGTGGTCCTGGATGCCGATTTTGGAGTGTAGATTGTGAGTTCGTTGAAAATCGTACTGGATCAGGTAATACAAGTAGTGTTTTTGTTTTGTCAAGCCTAACAACGCTTGCAAATTCACCACCTGCTAAGAAAAATGTTAATTCAGGACGTAAGTGGTTATGGGTTGTCATTGCAATCCCTACTGCACTACTATTGACGATGTTTTGCATATTCGGTTATCTACTAAGAAGACGAATGCTTTCAGGTGGGGACAGAGCAGGGAAGCAGAACACATGGCTTTTCTTTGATGAACCTCATCAAGAAAACATGGGAAAACATGATTTAAGCATATTTACGTATGAATCTATTCTGACTGCCACTTCCAACTTCTCGGAGGAAAACAAGCTCGGAGAAGGGGGATTTGGACCTGTTTATAAGGGAAAATTGGAGACGGGACGAGAAATAGCTGTGAAGAGGCTTTCAAAAAGTTCGGGACAAGGAAATATGGGGTTTAAGAATGAATTGATACTCATACATGAACTCCAACACACAAACCTTGTTCAGCTCTTTGGATTTTGCAGTCATGAAGACGAGAGGATGTTGATATACGAATACATGCCAAACAAAAGCTTAGACTACTTTATTTTTGATTCAATCAGAGGTAGGCTACTCGATTGGAAGAAGCGTTTCGGTATAATAGAAGGAATCACTCAAGGATTGCTTTACTTGCACAGATACTCGAGAACGAGAGTAATTCATAGAGATTTGAAAGCTAGTAATATACTACTCGACGAAAACATGAACCCTAAAATTGCAGATTTTGGCTTGGCAAGTATATTTACCCACACTGAATTGGAAGCAAATACTAGTAGGATTGTCGGGACACTTGGTTATATGCCTCCTGAGACCATTGAAGGAATAGTTTCTGTAAAAACCGATGTCTACAGTTTCGGGGTGTTAATACTGGAAATCATAAGCGGCAGGAAAAACAACCGCTTCTGCAATGATGATGGCTTACTCAATTTAGTAGGATATGCCTGGGAGTTATGGAAAGAAAATAAAGAGCTAGAACTAATGGATCCAACTCTAGGCGACTCCTATAACGGGAATCAACTGTTAAGATGCATCCATGTCGGTCTACTGTGCGTGGATGAAAACGCAGCCGATCGACCCACCATGTCGGATGTGATATCGATGTTGACAAACGAAAGCATGGAGTTGCCGAAACCAAAAAAGCCGGCATATTACGCACAAGGAAATGTGGACTTTACTGGTATACGTGAAACGGGAGAGCAAACTGGATCGATAAATGTTTTGTCTCATTCCGACATTGGTGGGCGTTGA

Protein Analysis

806

Amino Acids

89.86

Weight (kDa)

5.94

Isoelectric Point (pI)

35.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 77 - 184 2.9e-23 D-mannose binding lectin
Pkinase PF00069 489 - 688 2.4e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 491 - 756 7.3e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1509
AarI CACCTGC 1 cut(s) 1225
Acc36I ACCTGC 1 cut(s) 1225
AccB7I CCANNNNNTGG 1 cut(s) 1005
AccI GTMKAC 3 cut(s) 2016, 2212, 2350
AciI CCGC 4 cut(s) 517, 654, 2052, 2068
AclWI GGATC 7 cut(s) 190, 445, 776, 1162, 2147, 2160, 2383
AcoI YGGCCR 1 cut(s) 908
AcsI RAATTY 4 cut(s) 674, 929, 941, 1207
AcuI CTGAAG 1 cut(s) 714
AdeI CACNNNGTG 1 cut(s) 1015
AfaI GTAC 7 cut(s) 162, 260, 367, 713, 863, 922, 1150
AfiI CCNNNNNNNGG 7 cut(s) 575, 594, 595, 708, 1005, 2162, 2178
AgsI TTSAA 9 cut(s) 565, 827, 967, 993, 1142, 1557, 1728, 1843, 1988
AhlI ACTAGT 1 cut(s) 1940
AjnI CCWGG 5 cut(s) 91, 493, 574, 1102, 2111
AjuI GAANNNNNNNTTGG 2 cut(s) 1479, 1511
Alw21I GWGCWC 3 cut(s) 119, 428, 838
Alw26I GTCTC 3 cut(s) 1517, 1973, 2397
AlwI GGATC 7 cut(s) 190, 445, 776, 1162, 2147, 2160, 2383
Ama87I CYCGRG 2 cut(s) 112, 1813
AoxI GGCC 2 cut(s) 578, 908
ApeKI GCWGC 3 cut(s) 1056, 1059, 2234
ApoI RAATTY 4 cut(s) 674, 929, 941, 1207
Asp700I GAANNNNTTC 4 cut(s) 1333, 1440, 1760, 1996
AspS9I GGNCC 5 cut(s) 578, 598, 904, 1100, 1499
AsuC2I CCSGG 1 cut(s) 136
AsuHPI GGTGA 5 cut(s) 16, 271, 782, 947, 1203
AsuII TTCGAA 2 cut(s) 176, 731
AvaI CYCGRG 2 cut(s) 112, 1813
AvaII GGWCC 4 cut(s) 598, 904, 1100, 1499
BamHI GGATCC 1 cut(s) 2152
BanII GRGCYC 2 cut(s) 119, 428
BbsI GAAGAC 4 cut(s) 56, 750, 1330, 1668
Bbv12I GWGCWC 3 cut(s) 119, 428, 838
BbvI GCAGC 3 cut(s) 1046, 1068, 2246
BccI CCATC 3 cut(s) 65, 659, 2078
BcgI CGANNNNNNTGC 2 cut(s) 2188, 2222
BciT130I CCWGG 5 cut(s) 93, 495, 576, 1104, 2113
BciVI GTATCC 1 cut(s) 953
BclI TGATCA 1 cut(s) 18
BcnI CCSGG 1 cut(s) 136
BcoDI GTCTC 3 cut(s) 1517, 1973, 2397
BcuI ACTAGT 1 cut(s) 1940
BfaI CTAG 7 cut(s) 651, 981, 1095, 1848, 1941, 2141, 2162
BfmI CTRYAG 2 cut(s) 765, 2017
BfuAI ACCTGC 1 cut(s) 1225
BfuI GTATCC 1 cut(s) 953
BisI GCNGC 4 cut(s) 1057, 1060, 2053, 2235
BlsI GCNGC 4 cut(s) 1058, 1061, 2054, 2236
BmcAI AGTACT 2 cut(s) 367, 863
Bme1390I CCNGG 6 cut(s) 93, 136, 495, 576, 1104, 2113
Bme18I GGWCC 4 cut(s) 598, 904, 1100, 1499
BmeT110I CYCGRG 2 cut(s) 112, 1813
BmgT120I GGNCC 5 cut(s) 578, 598, 904, 1100, 1499
BmiI GGNNCC 4 cut(s) 599, 600, 905, 2154
BmrFI CCNGG 6 cut(s) 93, 136, 495, 576, 1104, 2113
BmsI GCATC 4 cut(s) 732, 1097, 2186, 2208
BpiI GAAGAC 4 cut(s) 56, 750, 1330, 1668
BpmI CTGGAG 1 cut(s) 1062
Bpu14I TTCGAA 2 cut(s) 176, 731
BpuEI CTTGAG 2 cut(s) 310, 1770
BpuMI CCSGG 1 cut(s) 136
Bsa29I ATCGAT 2 cut(s) 2267, 2378
BsaAI YACGTR 2 cut(s) 1431, 2354
BsaI GGTCTC 1 cut(s) 1973
BsaJI CCNNGG 6 cut(s) 92, 168, 316, 575, 1063, 2112
BsaXI ACNNNNNCTCC 6 cut(s) 825, 855, 879, 909, 1599, 1629
Bsc4I CCNNNNNNNGG 7 cut(s) 575, 594, 595, 708, 1005, 2162, 2178
Bse118I RCCGGY 2 cut(s) 906, 2311
Bse1I ACTGG 4 cut(s) 1156, 2043, 2350, 2377
Bse3DI GCAATG 2 cut(s) 1263, 2083
BseBI CCWGG 5 cut(s) 93, 495, 576, 1104, 2113
BseCI ATCGAT 2 cut(s) 2267, 2378
BseDI CCNNGG 6 cut(s) 92, 168, 316, 575, 1063, 2112
BseGI GGATG 5 cut(s) 1112, 1677, 2199, 2230, 2263
BseLI CCNNNNNNNGG 7 cut(s) 575, 594, 595, 708, 1005, 2162, 2178
BseMI GCAATG 2 cut(s) 1263, 2083
BseMII CTCAG 2 cut(s) 441, 1968
BseNI ACTGG 4 cut(s) 1156, 2043, 2350, 2377
BseRI GAGGAG 2 cut(s) 100, 336
BseXI GCAGC 3 cut(s) 1046, 1068, 2246
BsgI GTGCAG 2 cut(s) 555, 1263
Bsh1285I CGRYCG 1 cut(s) 2242
BshFI GGCC 2 cut(s) 580, 910
BshVI ATCGAT 2 cut(s) 2267, 2378
BsiEI CGRYCG 1 cut(s) 2242
BsiHKAI GWGCWC 3 cut(s) 119, 428, 838
BsiHKCI CYCGRG 2 cut(s) 112, 1813
BsiSI CCGG 4 cut(s) 135, 791, 907, 2312
BslFI GGGAC 8 cut(s) 110, 611, 829, 917, 1358, 1542, 1581, 1969
BslI CCNNNNNNNGG 7 cut(s) 575, 594, 595, 708, 1005, 2162, 2178
BsmAI GTCTC 3 cut(s) 1517, 1973, 2397
BsmBI CGTCTC 1 cut(s) 1517
BsmFI GGGAC 8 cut(s) 110, 611, 829, 917, 1358, 1542, 1581, 1969
BsmI GAATGC 1 cut(s) 1335
BsnI GGCC 2 cut(s) 580, 910
Bso31I GGTCTC 1 cut(s) 1973
BsoBI CYCGRG 2 cut(s) 112, 1813
Bsp119I TTCGAA 2 cut(s) 176, 731
Bsp1286I GDGCHC 3 cut(s) 119, 428, 838
Bsp1407I TGTACA 1 cut(s) 160
Bsp19I CCATGG 1 cut(s) 168
BspACI CCGC 4 cut(s) 517, 654, 2052, 2068
BspANI GGCC 2 cut(s) 580, 910
BspCNI CTCAG 2 cut(s) 440, 1969
BspDI ATCGAT 2 cut(s) 2267, 2378
BspHI TCATGA 2 cut(s) 67, 1657
BspLI GGNNCC 4 cut(s) 599, 600, 905, 2154
BspMI ACCTGC 1 cut(s) 1225
BspPI GGATC 7 cut(s) 190, 445, 776, 1162, 2147, 2160, 2383
BspT104I TTCGAA 2 cut(s) 176, 731
BspTNI GGTCTC 1 cut(s) 1973
BsrDI GCAATG 2 cut(s) 1263, 2083
BsrFI RCCGGY 2 cut(s) 906, 2311
BsrGI TGTACA 1 cut(s) 160
BsrI ACTGG 4 cut(s) 1156, 2043, 2350, 2377
BssAI RCCGGY 2 cut(s) 906, 2311
BssECI CCNNGG 6 cut(s) 92, 168, 316, 575, 1063, 2112
BssNAI GTATAC 1 cut(s) 2351
BssT1I CCWWGG 3 cut(s) 168, 316, 1063
Bst1107I GTATAC 1 cut(s) 2351
Bst2UI CCWGG 5 cut(s) 93, 495, 576, 1104, 2113
Bst4CI ACNGT 6 cut(s) 761, 861, 866, 2021, 2190, 2217
Bst6I CTCTTC 1 cut(s) 1541
BstAPI GCANNNNNTGC 1 cut(s) 842
BstAUI TGTACA 1 cut(s) 160
BstBAI YACGTR 2 cut(s) 1431, 2354
BstBI TTCGAA 2 cut(s) 176, 731
BstC8I GCNNGC 6 cut(s) 52, 424, 1007, 1046, 1203, 2313
BstDEI CTNAG 6 cut(s) 121, 427, 1221, 1319, 1705, 1977
BstDSI CCRYGG 1 cut(s) 168
BstEII GGTNACC 1 cut(s) 770
BstENI CCTNNNNNAGG 1 cut(s) 573
BstF5I GGATG 5 cut(s) 1112, 1677, 2199, 2230, 2263
BstMAI GTCTC 3 cut(s) 1517, 1973, 2397
BstMCI CGRYCG 1 cut(s) 2242
BstMWI GCNNNNNNNGC 5 cut(s) 380, 525, 842, 1801, 2321
BstNI CCWGG 5 cut(s) 93, 495, 576, 1104, 2113
BstNSI RCATGY 2 cut(s) 54, 1693
BstPI GGTNACC 1 cut(s) 770
BstSCI CCNGG 6 cut(s) 91, 134, 493, 574, 1102, 2111
BstSFI CTRYAG 2 cut(s) 765, 2017
BstSNI TACGTA 1 cut(s) 1431
BstV1I GCAGC 3 cut(s) 1046, 1068, 2246
BstV2I GAAGAC 4 cut(s) 56, 750, 1330, 1668
BstX2I RGATCY 1 cut(s) 2152
BstYI RGATCY 1 cut(s) 2152
BstZ17I GTATAC 1 cut(s) 2351
Bsu15I ATCGAT 2 cut(s) 2267, 2378
BsuI GTATCC 1 cut(s) 953
BsuRI GGCC 2 cut(s) 580, 910
BsuTUI ATCGAT 2 cut(s) 2267, 2378
BtgI CCRYGG 1 cut(s) 168
BtsCI GGATG 5 cut(s) 1112, 1677, 2199, 2230, 2263
BtsIMutI CAGTG 1 cut(s) 1920
BveI ACCTGC 1 cut(s) 1225
Cac8I GCNNGC 6 cut(s) 52, 424, 1007, 1046, 1203, 2313
CciI TCATGA 2 cut(s) 67, 1657
Cfr10I RCCGGY 2 cut(s) 906, 2311
Cfr13I GGNCC 5 cut(s) 578, 598, 904, 1100, 1499
ClaI ATCGAT 2 cut(s) 2267, 2378
CseI GACGC 1 cut(s) 120
Csp6I GTAC 7 cut(s) 161, 259, 366, 712, 862, 921, 1149
CspCI CAANNNNNGTGG 2 cut(s) 613, 648
CviQI GTAC 7 cut(s) 161, 259, 366, 712, 862, 921, 1149
DdeI CTNAG 6 cut(s) 121, 427, 1221, 1319, 1705, 1977
DraIII CACNNNGTG 1 cut(s) 1015
EaeI YGGCCR 1 cut(s) 908
Eam1104I CTCTTC 1 cut(s) 1541
EarI CTCTTC 1 cut(s) 1541
Ecl136II GAGCTC 2 cut(s) 117, 426
Eco105I TACGTA 1 cut(s) 1431
Eco130I CCWWGG 3 cut(s) 168, 316, 1063
Eco24I GRGCYC 2 cut(s) 119, 428
Eco31I GGTCTC 1 cut(s) 1973
Eco32I GATATC 1 cut(s) 2265
Eco47I GGWCC 4 cut(s) 598, 904, 1100, 1499
Eco53kI GAGCTC 2 cut(s) 117, 426
Eco57I CTGAAG 1 cut(s) 714
Eco88I CYCGRG 2 cut(s) 112, 1813
Eco91I GGTNACC 1 cut(s) 770
EcoICRI GAGCTC 2 cut(s) 117, 426
EcoNI CCTNNNNNAGG 1 cut(s) 573
EcoO109I RGGNCCY 2 cut(s) 578, 598
EcoO65I GGTNACC 1 cut(s) 770
EcoRII CCWGG 5 cut(s) 91, 493, 574, 1102, 2111
EcoRV GATATC 1 cut(s) 2265
EcoT14I CCWWGG 3 cut(s) 168, 316, 1063
EcoT22I ATGCAT 1 cut(s) 2201
EcoT38I GRGCYC 2 cut(s) 119, 428
ErhI CCWWGG 3 cut(s) 168, 316, 1063
Esp3I CGTCTC 1 cut(s) 1517
FalI AAGNNNNNCTT 2 cut(s) 1779, 1811
FaqI GGGAC 8 cut(s) 110, 611, 829, 917, 1358, 1542, 1581, 1969
FauI CCCGC 1 cut(s) 647
FbaI TGATCA 1 cut(s) 18
FblI GTMKAC 3 cut(s) 2016, 2212, 2350
Fnu4HI GCNGC 4 cut(s) 1057, 1060, 2053, 2235
FokI GGATG 5 cut(s) 1119, 1684, 2186, 2237, 2270
FriOI GRGCYC 2 cut(s) 119, 428
Fsp4HI GCNGC 4 cut(s) 1057, 1060, 2053, 2235
FspBI CTAG 7 cut(s) 651, 981, 1095, 1848, 1941, 2141, 2162
GluI GCNGC 4 cut(s) 1057, 1060, 2053, 2235
GsuI CTGGAG 1 cut(s) 1062
HaeIII GGCC 2 cut(s) 580, 910
HapII CCGG 4 cut(s) 135, 791, 907, 2312
HgaI GACGC 1 cut(s) 120
HincII GTYRAC 3 cut(s) 433, 514, 2274
HindII GTYRAC 3 cut(s) 433, 514, 2274
HindIII AAGCTT 2 cut(s) 559, 1702
HpaII CCGG 4 cut(s) 135, 791, 907, 2312
HphI GGTGA 5 cut(s) 16, 271, 782, 947, 1203
Hpy166II GTNNAC 7 cut(s) 433, 514, 2017, 2213, 2274, 2338, 2351
Hpy188I TCNGA 9 cut(s) 23, 351, 703, 1446, 1468, 1484, 1733, 2257, 2401
Hpy8I GTNNAC 7 cut(s) 433, 514, 2017, 2213, 2274, 2338, 2351
Hpy99I CGWCG 1 cut(s) 1868
HpyAV CCTTC 5 cut(s) 273, 894, 1481, 1769, 1982
HpyCH4III ACNGT 6 cut(s) 761, 861, 866, 2021, 2190, 2217
HpyCH4IV ACGT 4 cut(s) 1011, 1243, 1430, 2353
HpyF10VI GCNNNNNNNGC 5 cut(s) 380, 525, 842, 1801, 2321
HpyF3I CTNAG 6 cut(s) 121, 427, 1221, 1319, 1705, 1977
HpySE526I ACGT 4 cut(s) 1011, 1243, 1430, 2353
KflI GGGWCCC 1 cut(s) 598
KroI GCCGGC 1 cut(s) 2311
KroNI GCCGGC 1 cut(s) 2313
Ksp22I TGATCA 1 cut(s) 18
LmnI GCTCC 2 cut(s) 122, 833
Lsp1109I GCAGC 3 cut(s) 1046, 1068, 2246
LweI GCATC 4 cut(s) 732, 1097, 2186, 2208
MaeI CTAG 7 cut(s) 651, 981, 1095, 1848, 1941, 2141, 2162
MaeII ACGT 4 cut(s) 1011, 1243, 1430, 2353
MaeIII GTNAC 4 cut(s) 4, 537, 770, 866
MboII GAAGA 9 cut(s) 28, 56, 258, 755, 979, 1335, 1558, 1673, 1765
MfeI CAATTG 2 cut(s) 614, 916
MflI RGATCY 1 cut(s) 2152
MhlI GDGCHC 3 cut(s) 119, 428, 838
MlyI GAGTC 3 cut(s) 70, 971, 2162
MmeI TCCRAC 5 cut(s) 865, 1482, 1642, 2180, 2235
Mph1103I ATGCAT 1 cut(s) 2201
MroNI GCCGGC 1 cut(s) 2311
MroXI GAANNNNTTC 4 cut(s) 1333, 1440, 1760, 1996
MseI TTAA 6 cut(s) 144, 1233, 1418, 1587, 2033, 2192
MslI CAYNNNNRTG 1 cut(s) 55
MspA1I CMGCKG 2 cut(s) 1005, 1059
MspI CCGG 4 cut(s) 135, 791, 907, 2312
MspR9I CCNGG 6 cut(s) 93, 136, 495, 576, 1104, 2113
MunI CAATTG 2 cut(s) 614, 916
Mva1269I GAATGC 1 cut(s) 1335
MvaI CCWGG 5 cut(s) 93, 495, 576, 1104, 2113
MwoI GCNNNNNNNGC 5 cut(s) 380, 525, 842, 1801, 2321
NaeI GCCGGC 1 cut(s) 2313
NciI CCSGG 1 cut(s) 136
NcoI CCATGG 1 cut(s) 168
NgoMIV GCCGGC 1 cut(s) 2311
NlaIV GGNNCC 4 cut(s) 599, 600, 905, 2154
NmuCI GTSAC 4 cut(s) 4, 537, 770, 866
NsiI ATGCAT 1 cut(s) 2201
NspI RCATGY 2 cut(s) 54, 1693
NspV TTCGAA 2 cut(s) 176, 731
PaeI GCATGC 1 cut(s) 54
PaeR7I CTCGAG 2 cut(s) 112, 1813
PagI TCATGA 2 cut(s) 67, 1657
PaqCI CACCTGC 1 cut(s) 1225
PctI GAATGC 1 cut(s) 1335
PdiI GCCGGC 1 cut(s) 2313
PdmI GAANNNNTTC 4 cut(s) 1333, 1440, 1760, 1996
PfeI GAWTC 7 cut(s) 173, 395, 621, 1436, 1724, 1779, 2182
PflMI CCANNNNNTGG 1 cut(s) 1005
PfoI TCCNGGA 2 cut(s) 134, 1102
PkrI GCNGC 4 cut(s) 1058, 1061, 2054, 2236
Ple19I CGATCG 1 cut(s) 2242
PleI GAGTC 3 cut(s) 69, 971, 2162
PpsI GAGTC 3 cut(s) 69, 971, 2162
Ppu21I YACGTR 2 cut(s) 1431, 2354
PpuMI RGGWCCY 1 cut(s) 598
PsiI TTATAA 1 cut(s) 1509
Psp124BI GAGCTC 2 cut(s) 119, 428
Psp5II RGGWCCY 1 cut(s) 598
Psp6I CCWGG 5 cut(s) 91, 493, 574, 1102, 2111
PspEI GGTNACC 1 cut(s) 770
PspGI CCWGG 5 cut(s) 91, 493, 574, 1102, 2111
PspN4I GGNNCC 4 cut(s) 599, 600, 905, 2154
PspPI GGNCC 5 cut(s) 578, 598, 904, 1100, 1499
PspPPI RGGWCCY 1 cut(s) 598
PspXI VCTCGAGB 1 cut(s) 112
PsuI RGATCY 1 cut(s) 2152
PvuI CGATCG 1 cut(s) 2242
PvuII CAGCTG 2 cut(s) 1005, 1059
RsaI GTAC 7 cut(s) 162, 260, 367, 713, 863, 922, 1150
RsaNI GTAC 7 cut(s) 161, 259, 366, 712, 862, 921, 1149
RseI CAYNNNNRTG 1 cut(s) 55
SacI GAGCTC 2 cut(s) 119, 428
SaqAI TTAA 6 cut(s) 144, 1233, 1418, 1587, 2033, 2192
SatI GCNGC 4 cut(s) 1057, 1060, 2053, 2235
Sau96I GGNCC 5 cut(s) 578, 598, 904, 1100, 1499
ScaI AGTACT 2 cut(s) 367, 863
SchI GAGTC 3 cut(s) 70, 971, 2162
ScrFI CCNGG 6 cut(s) 93, 136, 495, 576, 1104, 2113
SduI GDGCHC 3 cut(s) 119, 428, 838
SfaNI GCATC 4 cut(s) 732, 1097, 2186, 2208
SfcI CTRYAG 2 cut(s) 765, 2017
Sfr274I CTCGAG 2 cut(s) 112, 1813
SfuI TTCGAA 2 cut(s) 176, 731
SinI GGWCC 4 cut(s) 598, 904, 1100, 1499
SlaI CTCGAG 2 cut(s) 112, 1813
SmiMI CAYNNNNRTG 1 cut(s) 55
SmlI CTYRAG 4 cut(s) 112, 289, 1785, 1813
SmoI CTYRAG 4 cut(s) 112, 289, 1785, 1813
SnaBI TACGTA 1 cut(s) 1431
SpeI ACTAGT 1 cut(s) 1940
SphI GCATGC 1 cut(s) 54
SsiI CCGC 4 cut(s) 517, 654, 2052, 2068
SspI AATATT 1 cut(s) 358
SspMI CTAG 7 cut(s) 651, 981, 1095, 1848, 1941, 2141, 2162
SstI GAGCTC 2 cut(s) 119, 428
StyD4I CCNGG 6 cut(s) 91, 134, 493, 574, 1102, 2111
StyI CCWWGG 3 cut(s) 168, 316, 1063
TaaI ACNGT 6 cut(s) 761, 861, 866, 2021, 2190, 2217
TaiI ACGT 4 cut(s) 1014, 1246, 1433, 2356
TaqII GACCGA 1 cut(s) 2198
TatI WGTACW 3 cut(s) 160, 365, 861
TauI GCSGC 1 cut(s) 2055
TfiI GAWTC 7 cut(s) 173, 395, 621, 1436, 1724, 1779, 2182
Tru1I TTAA 6 cut(s) 144, 1233, 1418, 1587, 2033, 2192
Tru9I TTAA 6 cut(s) 144, 1233, 1418, 1587, 2033, 2192
TscAI CASTG 1 cut(s) 1927
TseFI GTSAC 4 cut(s) 4, 537, 770, 866
TseI GCWGC 3 cut(s) 1056, 1059, 2234
Tsp45I GTSAC 4 cut(s) 4, 537, 770, 866
TspGWI ACGGA 4 cut(s) 246, 450, 462, 885
TspRI CASTG 1 cut(s) 1927
Van91I CCANNNNNTGG 1 cut(s) 1005
VpaK11BI GGWCC 4 cut(s) 598, 904, 1100, 1499
XagI CCTNNNNNAGG 1 cut(s) 573
XapI RAATTY 4 cut(s) 674, 929, 941, 1207
XceI RCATGY 2 cut(s) 54, 1693
XcmI CCANNNNNNNNNTGG 2 cut(s) 225, 792
XhoI CTCGAG 2 cut(s) 112, 1813
XmiI GTMKAC 3 cut(s) 2016, 2212, 2350
XmnI GAANNNNTTC 4 cut(s) 1333, 1440, 1760, 1996
XspI CTAG 7 cut(s) 651, 981, 1095, 1848, 1941, 2141, 2162
ZrmI AGTACT 2 cut(s) 367, 863
Zsp2I ATGCAT 1 cut(s) 2201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.