RchiOBHm_Chr5g0025571

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
19460406 .. 19464003
3598 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30521

Sequence Viewer

Length: 2553 bp
ATGGTTAATGTGATGGCCATGTTAGCTGGTTTTCAAGAACAGCATGAGAAAGCAATGTACCTTGTGATAATAAACCATGGGTTTAGGTTTGTTCAACTTTTAATTTTCTTTCTGATCATTCTTTCAAGCTTGTGGGATTTTCATGTTGCTGCTGCAAGAGACAATATTGGGGACACACTCAGGGTAGGTGACACTCTCAATTCCTCAAGCGCCTTGGTCTCCGCCTCCAACAAGTTCACCTTGCTTTTCTTGACAAACGGTTCCAGTTCCAACTACAGCTATCTATATATTAAGCGGTACAATGTTAGTGATGCGAATAAGGCGTGGGTTGCCAACCGAGACTCACCTGTTTTATACCCTCATGGAGTTCTTACCTTGGACTCCAACAACACTCTGAAAATTATTACAACGCAAGGTGGTCCGGGCAGTGGTGATGGTGATCCTCTTGTAGTGCTTGGATCTGTGCCAAAAAGTAGTAGTACTGTTGTGGCTACTCTATTGGATTCTGGTAATTTTATCCTGCAAGAGCTGAACTCTGATGGATCAACAAAGCAGGTGTGGTGGCAAAGTTTTGATTATCCAACGGACACCTTTTTACCAGGCATGAAGTTAGGCGTGAACCATAGTAATAATGGGCATATTTGGTCTCTTACGTCATGGACTTCCTTTCACAATCCACTGCCTGGGCCTTTCACCCTTGGTTGGGACCCAAATGGTCGCCAATTGGAAATTCGTGGCCGTGGGACGGTGTATTGGAGAAGCGGAAACTACAACACAAGTAGTAATAGATTTGAATTTATTATACCGAATCAAAAGCTTATTTTCCATTATAGCATTTTTTTAAATGAGAATGAAGAGTACCTCACTTACACTACCAGAGATGATGATCAAAATGGTGAGTTTCCAGAATGGTTGCTGAACTTCGATGGCAGACTTTTTAATTTTTATGGATCAGCACTTGATATTGCACGAGCAGATGAGTGTGGCAATAACATTGATGGACTAGGGTGCCAGACAAATGACCAGCTAACTGATTTTTGTAAGGCGGAGGTTGGCCAAAAATTTCAGCAAAAAAAGGGTTACTTCAAACCAACCCCCTTGAGTTCCACTTCAAGATGCCCGTACTGGCTTAAGGATGTTTCAAATACAACCTCTAATATTACTAGTGCTGATTGTGAGGACACTTGCAGGCGATACTGTGACTGCCTTGGATTCGATTTTCTATATCAGTATCCAACTGGGTGCCGATTTTGGAGTTCAGATTGTGAATTCTATGAAGACTTCACTCAACCAGGGACTGCAAGTAGTTTTGTAAGATCAATGGCACCAAAATCATCACCCAGTAAGTCACCAGTAATTAAGCCTTTTGCATCTTGTGTCATCTACGAAGAAGAAGAAGAAAACCTGAACTTTCAGGTATATTGTTTAGTTAAGCATTATAAGCAGTTAGATAGATTCAACTTCATGTTTTTGAGGTTTTCTGTCCCTGCACTATTCTTAGTAGGTGAGAATGAGATTGATCAGAACAAATTGCTGGTCATGGGACATGATTTAAGCATATTTAGCTATGCATCAATCATGGCTGCCACATGTAACTTCGCTGAAGAAAACAAGCTTGGAGAAGGGGGATTTGGACCTGTTTATAAGGGAAGATTGTTGACGGGAAAAGAAATTGCAGTGAAGAGGCTTTCAAAATGTTCGGGGCAAGGAACGTTGGAGTTTAAGAATGAATTGATCCTCATATATGAACTTCAACACACAAACCTTGTCCAGCTTTTTGGATTTTGCATTCATAGGGAAGAGAGGATGTTGATATATGAGTACATGCCAAACAAAAGTCTGGACTACTTTTTATTTGATGCAACTGAAGGCGTTCTTCTCGATTGGCACAAGCGTTTCAGCATAATTGAGGGAATTACTCAAGGATTGCTTTATTTGCACAAATACTCGAGAAAGAAAGTAGTTCATAGAGACTTAAAAGCTAGTAATGTACTACTTGATAAAGATATGAATCCAAAAATTTCTGATTTTGGTATGGCAAGAATTTTCACACATACTGAACTTCAAATAAATACGGGCAGGATTGTTGGGACACTTGGTTACATGCCTCCTGAGTATGCAATGAATGGAATTTTTTCTATAAAATCTGATGTCTACAGTTTTGGGGTGTTAATGCTTGAAATCCTAAGTGGTAGGAAAAACAACAGCTTCTACAATGATGATCGAGTACTCAATTTAGCAGGATATGCGTGGGAGTTATGGAAAGATGGTGCAGGGCTACAGCTAATGGATTCAAACTTGGGTGATTCATGTAATAAGGATCAGTTTTTAAGATGCGTCAATGTTGGTCTACTATGCGTGGGGGATAATGCAGCCAATCGGCCTACCATGTCAGAAGTGATATCTATGTTGACAAATGAAAGCCTGCCGCTACCTGAACCTACAAAACCATCATTTTGTACTGAAGAAGTGATCGTTGCTACTATAGTTGGAGGCAAACCACAAATTCTGTCAATGAATGGTATGACCATTTCCGATATGTGTGGACGTTAA

Protein Analysis

850

Amino Acids

95.87

Weight (kDa)

5.51

Isoelectric Point (pI)

38.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 109 - 220 8.9e-24 D-mannose binding lectin
Pkinase PF00069 534 - 733 2.8e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 536 - 800 1.1e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000096)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24770 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15080 FvH4_3g15090 FvH4_3g15090 FvH4_3g15090 FvH4_3g15100 FvH4_3g15110 FvH4_3g15110 FvH4_3g15120 FvH4_3g15120 FvH4_3g15130 FvH4_3g15140 FvH4_3g15150 FvH4_3g15160 FvH4_3g29142
malus_domestica MD05G1226400.v1.1 MD05G1227000.v1.1 MD05G1227200.v1.1 MD05G1227300.v1.1 MD05G1227400.v1.1 MD05G1227500.v1.1 MD05G1227600.v1.1 MD09G1060100.v1.1 MD10G1206700.v1.1 MD10G1206800.v1.1 MD10G1206900.v1.1 MD10G1207000.v1.1 MD10G1207300.v1.1 MD10G1207500.v1.1 MD10G1207700.v1.1 MD10G1207800.v1.1 MD10G1208000.v1.1
prunus_persica Prupe.4G134900_v2.0.a1 Prupe.4G135000_v2.0.a1 Prupe.4G135100_v2.0.a1 Prupe.4G135200_v2.0.a1 Prupe.4G135400_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135500_v2.0.a1 Prupe.4G135600_v2.0.a1 Prupe.4G162400_v2.0.a1 Prupe.6G158800_v2.0.a1 Prupe.6G158800_v2.0.a1
pyrus_communis pycom05g20870 pycom05g20880 pycom05g20950 pycom05g20960 pycom10g17650 pycom10g17670 pycom10g17690
rosa_chinensis RchiOBHm_Chr4g0410521 RchiOBHm_Chr5g0024831 RchiOBHm_Chr5g0024841 RchiOBHm_Chr5g0024871 RchiOBHm_Chr5g0024901 RchiOBHm_Chr5g0024921 RchiOBHm_Chr5g0024951 RchiOBHm_Chr5g0024971 RchiOBHm_Chr5g0025011 RchiOBHm_Chr5g0025031 RchiOBHm_Chr5g0025041 RchiOBHm_Chr5g0025051 RchiOBHm_Chr5g0025071 RchiOBHm_Chr5g0025091 RchiOBHm_Chr5g0025101 RchiOBHm_Chr5g0025121 RchiOBHm_Chr5g0025131 RchiOBHm_Chr5g0025171 RchiOBHm_Chr5g0025181 RchiOBHm_Chr5g0025201 RchiOBHm_Chr5g0025211 RchiOBHm_Chr5g0025221 RchiOBHm_Chr5g0025261 RchiOBHm_Chr5g0025321 RchiOBHm_Chr5g0025351 RchiOBHm_Chr5g0025371 RchiOBHm_Chr5g0025381 RchiOBHm_Chr5g0025421 RchiOBHm_Chr5g0025451 RchiOBHm_Chr5g0025511 RchiOBHm_Chr5g0025521 RchiOBHm_Chr5g0025531 RchiOBHm_Chr5g0025551 RchiOBHm_Chr5g0025571 RchiOBHm_Chr5g0025581 RchiOBHm_Chr5g0025611 RchiOBHm_Chr5g0072881
rosa_laevigata RLG00000008419 RLG00000032818 RLG00000032819 RLG00000032820 RLG00000032822 RLG00000032823 RLG00000032824 RLG00000032826 RLG00000032828 RLG00000032832 RLG00000032834 RLG00000032835 RLG00000032836 RLG00000032837 RLG00000032838 RLG00000032839 RLG00000032840 RLG00000032841 RLG00000032842 RLG00000032844 RLG00000032845 RLG00000032847 RLG00000032848 RLG00000032849
rosa_multiflora Rmu_co8009526.1_g000001 Rmu_co8228985.1_g000001 Rmu_co8395667.1_g000001 Rmu_sc0001069.1_g000006 Rmu_sc0001069.1_g000008 Rmu_sc0001069.1_g000030 Rmu_sc0001069.1_g000031 Rmu_sc0003576.1_g000001 Rmu_sc0003576.1_g000006 Rmu_sc0003576.1_g000011 Rmu_sc0003576.1_g000020 Rmu_sc0003576.1_g000021 Rmu_sc0003576.1_g000024 Rmu_sc0003576.1_g000028 Rmu_sc0004107.1_g000005 Rmu_sc0004107.1_g000006 Rmu_sc0004107.1_g000007 Rmu_sc0004107.1_g000017 Rmu_sc0005100.1_g000007 Rmu_sc0005564.1_g000005 Rmu_sc0006827.1_g000005 Rmu_sc0006827.1_g000006 Rmu_sc0006827.1_g000012 Rmu_sc0006827.1_g000014 Rmu_sc0006827.1_g000016 Rmu_sc0006827.1_g000020 Rmu_sc0006827.1_g000025 Rmu_sc0009744.1_g000005 Rmu_sc0018969.1_g000001 Rmu_sc0039632.1_g000001
rosa_roxburghii Rroxscaffold_1G00043620 Rroxscaffold_1G00053590 Rroxscaffold_1G00053620 Rroxscaffold_1G00053660 Rroxscaffold_1G00053670 Rroxscaffold_1G00053680 Rroxscaffold_1G00053740 Rroxscaffold_1G00053760 Rroxscaffold_1G00053770 Rroxscaffold_1G00053790 Rroxscaffold_1G00053810 Rroxscaffold_1G00053830 Rroxscaffold_1G00053840 Rroxscaffold_1G00053850 Rroxscaffold_1G00053860 Rroxscaffold_1G00053880 Rroxscaffold_1G00053890 Rroxscaffold_1G00053920 Rroxscaffold_1G00053930 Rroxscaffold_1G00053940 Rroxscaffold_1G00053950 Rroxscaffold_1G00053980 Rroxscaffold_1G00054000 Rroxscaffold_1G00054050 Rroxscaffold_1G00054080 Rroxscaffold_1G00054090 Rroxscaffold_1G00054110 Rroxscaffold_1G00054130 Rroxscaffold_1G00054160 Rroxscaffold_1G00054170 Rroxscaffold_1G00054390 Rroxscaffold_1G00054440 Rroxscaffold_1G00054450 Rroxscaffold_1G00054460 Rroxscaffold_1G00054480 Rroxscaffold_1G00054520 Rroxscaffold_1G00054540 Rroxscaffold_1G00054550 Rroxscaffold_7G00198640
rosa_rugosa Rorug05G0084800.1 Rorug05G0084900.1 Rorug05G0085100.1 Rorug05G0085200.1 Rorug05G0085300 Rorug05G0085300 Rorug05G0085400 Rorug05G0085400 Rorug05G0085500 Rorug05G0085600 Rorug05G0085700 Rorug05G0085800 Rorug05G0085900 Rorug05G0086000 Rorug05G0086400 Rorug05G0086600.1 Rorug05G0086900 Rorug05G0087000 Rorug05G0087100 Rorug05G0088000
rosa_samantha Rh4AG161200 Rh4BG160700 Rh4CG173500 Rh5AG173800 Rh5AG176700 Rh5AG176800 Rh5AG177000 Rh5AG177900 Rh5AG178900 Rh5BG174300 Rh5BG174400 Rh5BG174600 Rh5BG174700 Rh5BG174800 Rh5BG175000 Rh5BG175400 Rh5BG176000 Rh5BG176100 Rh5BG176200 Rh5BG176300 Rh5BG176600 Rh5BG176700 Rh5BG177000 Rh5BG177400 Rh5BG177900 Rh5CG191400 Rh5CG191600 Rh5CG191700 Rh5CG191900 Rh5CG192000 Rh5CG192200 Rh5CG192300 Rh5CG192500 Rh5CG192600 Rh5CG193200 Rh5CG193300 Rh5CG193400 Rh5CG193500 Rh5CG193700 Rh5CG193800 Rh5CG193900 Rh5CG194000 Rh5CG194100 Rh5CG194200 Rh5CG194600 Rh5CG194700 Rh5CG194800 Rh5CG195300 Rh5CG195400 Rh5CG195500 Rh5CG195600
rosa_wichuraiana Rw4G013480 Rw5G016010 Rw5G016020 Rw5G016030 Rw5G016040 Rw5G016050 Rw5G016110 Rw5G016120 Rw5G016130 Rw5G016140 Rw5G016150 Rw5G016170 Rw5G016180 Rw5G016230 Rw5G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1440, 1644
AarI CACCTGC 1 cut(s) 544
Acc36I ACCTGC 1 cut(s) 544
AccB1I GGYRCC 3 cut(s) 1008, 1242, 1324
AccB7I CCANNNNNTGG 1 cut(s) 683
AccI GTMKAC 2 cut(s) 2154, 2350
AciI CCGC 5 cut(s) 222, 295, 762, 1046, 2429
AclI AACGTT 1 cut(s) 1712
AclWI GGATC 6 cut(s) 434, 466, 550, 958, 1729, 2328
AcoI YGGCCR 3 cut(s) 15, 736, 1054
AcsI RAATTY 8 cut(s) 729, 794, 1061, 1268, 2019, 2043, 2130, 2505
AcuI CTGAAG 3 cut(s) 1623, 1887, 2484
AfaI GTAC 9 cut(s) 59, 299, 481, 860, 1124, 1823, 1992, 2229, 2461
AfiI CCNNNNNNNGG 5 cut(s) 428, 683, 702, 703, 745
AflII CTTAAG 1 cut(s) 1130
AflIII ACRYGT 1 cut(s) 1589
AhlI ACTAGT 1 cut(s) 1163
AjnI CCWGG 3 cut(s) 598, 682, 1291
AjuI GAANNNNNNNTTGG 6 cut(s) 714, 746, 1599, 1614, 1631, 1646
Alw26I GTCTC 5 cut(s) 153, 223, 333, 651, 1965
AlwI GGATC 6 cut(s) 434, 466, 550, 958, 1729, 2328
AlwNI CAGNNNCTG 1 cut(s) 1298
Ama87I CYCGRG 1 cut(s) 1948
AoxI GGCC 5 cut(s) 15, 686, 736, 1054, 2381
ApeKI GCWGC 4 cut(s) 149, 152, 1583, 2372
ApoI RAATTY 8 cut(s) 729, 794, 1061, 1268, 2019, 2043, 2130, 2505
ArsI GACNNNNNNTTYG 2 cut(s) 1521, 1553
Asp700I GAANNNNTTC 2 cut(s) 1872, 2134
AspLEI GCGC 1 cut(s) 212
AspS9I GGNCC 4 cut(s) 419, 686, 706, 1634
AsuC2I CCSGG 1 cut(s) 423
AvaI CYCGRG 1 cut(s) 1948
AvaII GGWCC 3 cut(s) 419, 706, 1634
BalI TGGCCA 2 cut(s) 17, 1056
BanI GGYRCC 3 cut(s) 1008, 1242, 1324
BauI CACGAG 1 cut(s) 969
BbsI GAAGAC 1 cut(s) 1284
BbvI GCAGC 4 cut(s) 136, 139, 1570, 2384
BccI CCATC 7 cut(s) 7, 428, 533, 920, 992, 2261, 2458
BceAI ACGGC 1 cut(s) 723
BciT130I CCWGG 3 cut(s) 600, 684, 1293
BciVI GTATCC 1 cut(s) 1242
BclI TGATCA 3 cut(s) 114, 886, 1519
BcnI CCSGG 1 cut(s) 423
BcoDI GTCTC 5 cut(s) 153, 223, 333, 651, 1965
BcuI ACTAGT 1 cut(s) 1163
BfaI CTAG 3 cut(s) 1004, 1164, 1983
BfmI CTRYAG 4 cut(s) 274, 2155, 2279, 2484
BfoI RGCGCY 1 cut(s) 213
BfrI CTTAAG 1 cut(s) 1130
BfuAI ACCTGC 1 cut(s) 544
BfuI GTATCC 1 cut(s) 1242
BisI GCNGC 5 cut(s) 150, 153, 1584, 2373, 2429
BlsI GCNGC 5 cut(s) 151, 154, 1585, 2374, 2430
BmcAI AGTACT 2 cut(s) 481, 2229
Bme1390I CCNGG 4 cut(s) 423, 600, 684, 1293
Bme18I GGWCC 3 cut(s) 419, 706, 1634
BmeT110I CYCGRG 1 cut(s) 1948
BmgT120I GGNCC 4 cut(s) 419, 686, 706, 1634
BmiI GGNNCC 6 cut(s) 262, 707, 708, 1010, 1244, 1326
BmrFI CCNGG 4 cut(s) 423, 600, 684, 1293
BmrI ACTGGG 2 cut(s) 1248, 1335
BmsI GCATC 6 cut(s) 301, 1106, 1379, 1580, 1849, 2324
BmuI ACTGGG 2 cut(s) 1248, 1335
BpiI GAAGAC 1 cut(s) 1284
BplI GAGNNNNNCTC 2 cut(s) 518, 550
BpuEI CTTGAG 3 cut(s) 190, 1120, 1905
BpuMI CCSGG 1 cut(s) 423
BsaBI GATNNNNATC 3 cut(s) 438, 885, 2010
BsaI GGTCTC 2 cut(s) 223, 651
BsaJI CCNNGG 8 cut(s) 76, 213, 375, 683, 697, 739, 1207, 1292
Bsc4I CCNNNNNNNGG 5 cut(s) 428, 683, 702, 703, 745
Bse1I ACTGG 5 cut(s) 264, 1130, 1243, 1341, 1352
Bse3DI GCAATG 2 cut(s) 60, 2127
Bse8I GATNNNNATC 3 cut(s) 438, 885, 2010
BseBI CCWGG 3 cut(s) 600, 684, 1293
BseDI CCNNGG 8 cut(s) 76, 213, 375, 683, 697, 739, 1207, 1292
BseGI GGATG 2 cut(s) 1141, 1812
BseJI GATNNNNATC 3 cut(s) 438, 885, 2010
BseLI CCNNNNNNNGG 5 cut(s) 428, 683, 702, 703, 745
BseMI GCAATG 2 cut(s) 60, 2127
BseMII CTCAG 2 cut(s) 193, 2103
BseNI ACTGG 5 cut(s) 264, 1130, 1243, 1341, 1352
BseXI GCAGC 4 cut(s) 136, 139, 1570, 2384
BsgI GTGCAG 2 cut(s) 1473, 2292
BshFI GGCC 5 cut(s) 17, 688, 738, 1056, 2383
BshNI GGYRCC 3 cut(s) 1008, 1242, 1324
BsiHKCI CYCGRG 1 cut(s) 1948
BsiSI CCGG 1 cut(s) 422
BslFI GGGAC 7 cut(s) 185, 719, 757, 1309, 1469, 1557, 2104
BslI CCNNNNNNNGG 5 cut(s) 428, 683, 702, 703, 745
BsmAI GTCTC 5 cut(s) 153, 223, 333, 651, 1965
BsmFI GGGAC 7 cut(s) 185, 719, 757, 1309, 1469, 1557, 2104
BsmI GAATGC 1 cut(s) 1788
BsnI GGCC 5 cut(s) 17, 688, 738, 1056, 2383
Bso31I GGTCTC 2 cut(s) 223, 651
BsoBI CYCGRG 1 cut(s) 1948
Bsp19I CCATGG 1 cut(s) 76
BspACI CCGC 5 cut(s) 222, 295, 762, 1046, 2429
BspANI GGCC 5 cut(s) 17, 688, 738, 1056, 2383
BspCNI CTCAG 2 cut(s) 192, 2104
BspLI GGNNCC 6 cut(s) 262, 707, 708, 1010, 1244, 1326
BspMI ACCTGC 1 cut(s) 544
BspPI GGATC 6 cut(s) 434, 466, 550, 958, 1729, 2328
BspT107I GGYRCC 3 cut(s) 1008, 1242, 1324
BspTI CTTAAG 1 cut(s) 1130
BspTNI GGTCTC 2 cut(s) 223, 651
BsrDI GCAATG 2 cut(s) 60, 2127
BsrI ACTGG 5 cut(s) 264, 1130, 1243, 1341, 1352
BssECI CCNNGG 8 cut(s) 76, 213, 375, 683, 697, 739, 1207, 1292
BssSI CACGAG 1 cut(s) 969
BssT1I CCWWGG 5 cut(s) 76, 213, 375, 697, 1207
Bst2BI CACGAG 1 cut(s) 969
Bst2UI CCWGG 3 cut(s) 600, 684, 1293
Bst4CI ACNGT 5 cut(s) 260, 484, 748, 1199, 2159
Bst6I CTCTTC 3 cut(s) 849, 1676, 1794
BstAFI CTTAAG 1 cut(s) 1130
BstAPI GCANNNNNTGC 1 cut(s) 2246
BstC8I GCNNGC 2 cut(s) 1190, 2426
BstDEI CTNAG 4 cut(s) 179, 1498, 2112, 2186
BstDSI CCRYGG 2 cut(s) 76, 739
BstF5I GGATG 2 cut(s) 1141, 1812
BstH2I RGCGCY 1 cut(s) 213
BstHHI GCGC 1 cut(s) 212
BstMAI GTCTC 5 cut(s) 153, 223, 333, 651, 1965
BstMWI GCNNNNNNNGC 7 cut(s) 23, 320, 329, 1441, 1563, 1936, 2246
BstNI CCWGG 3 cut(s) 600, 684, 1293
BstNSI RCATGY 3 cut(s) 1593, 1828, 2107
BstSCI CCNGG 4 cut(s) 421, 598, 682, 1291
BstSFI CTRYAG 4 cut(s) 274, 2155, 2279, 2484
BstV1I GCAGC 4 cut(s) 136, 139, 1570, 2384
BstV2I GAAGAC 1 cut(s) 1284
BstX2I RGATCY 1 cut(s) 458
BstXI CCANNNNNNTGG 1 cut(s) 1778
BstYI RGATCY 1 cut(s) 458
BsuI GTATCC 1 cut(s) 1242
BsuRI GGCC 5 cut(s) 17, 688, 738, 1056, 2383
BtgI CCRYGG 2 cut(s) 76, 739
BtsCI GGATG 2 cut(s) 1141, 1812
BtsI GCAGTG 3 cut(s) 433, 677, 1683
BtsIMutI CAGTG 3 cut(s) 433, 677, 1683
BveI ACCTGC 1 cut(s) 544
Cac8I GCNNGC 2 cut(s) 1190, 2426
CaiI CAGNNNCTG 1 cut(s) 1298
CfoI GCGC 1 cut(s) 212
Cfr13I GGNCC 4 cut(s) 419, 686, 706, 1634
CseI GACGC 1 cut(s) 2326
Csp6I GTAC 9 cut(s) 58, 298, 480, 859, 1123, 1822, 1991, 2228, 2460
CviQI GTAC 9 cut(s) 58, 298, 480, 859, 1123, 1822, 1991, 2228, 2460
DdeI CTNAG 4 cut(s) 179, 1498, 2112, 2186
DraI TTTAAA 1 cut(s) 843
EaeI YGGCCR 3 cut(s) 15, 736, 1054
Eam1104I CTCTTC 3 cut(s) 849, 1676, 1794
EarI CTCTTC 3 cut(s) 849, 1676, 1794
EciI GGCGGA 2 cut(s) 211, 1061
Eco130I CCWWGG 5 cut(s) 76, 213, 375, 697, 1207
Eco31I GGTCTC 2 cut(s) 223, 651
Eco32I GATATC 1 cut(s) 2403
Eco47I GGWCC 3 cut(s) 419, 706, 1634
Eco57I CTGAAG 3 cut(s) 1623, 1887, 2484
Eco88I CYCGRG 1 cut(s) 1948
EcoO109I RGGNCCY 1 cut(s) 706
EcoRI GAATTC 1 cut(s) 1268
EcoRII CCWGG 3 cut(s) 598, 682, 1291
EcoRV GATATC 1 cut(s) 2403
EcoT14I CCWWGG 5 cut(s) 76, 213, 375, 697, 1207
EcoT22I ATGCAT 1 cut(s) 1573
ErhI CCWWGG 5 cut(s) 76, 213, 375, 697, 1207
FalI AAGNNNNNCTT 8 cut(s) 224, 256, 1067, 1099, 1860, 1892, 1914, 1946
FaqI GGGAC 7 cut(s) 185, 719, 757, 1309, 1469, 1557, 2104
FbaI TGATCA 3 cut(s) 114, 886, 1519
FblI GTMKAC 2 cut(s) 2154, 2350
Fnu4HI GCNGC 5 cut(s) 150, 153, 1584, 2373, 2429
FokI GGATG 2 cut(s) 1148, 1819
Fsp4HI GCNGC 5 cut(s) 150, 153, 1584, 2373, 2429
FspBI CTAG 3 cut(s) 1004, 1164, 1983
GlaI GCGC 1 cut(s) 211
GluI GCNGC 5 cut(s) 150, 153, 1584, 2373, 2429
HaeII RGCGCY 1 cut(s) 213
HaeIII GGCC 5 cut(s) 17, 688, 738, 1056, 2383
HapII CCGG 1 cut(s) 422
HgaI GACGC 1 cut(s) 2326
HhaI GCGC 1 cut(s) 212
Hin6I GCGC 1 cut(s) 210
HinP1I GCGC 1 cut(s) 210
HincII GTYRAC 2 cut(s) 1659, 2412
HindII GTYRAC 2 cut(s) 1659, 2412
HindIII AAGCTT 3 cut(s) 127, 815, 1613
HinfI GANTC 9 cut(s) 341, 380, 503, 808, 1212, 1455, 2011, 2291, 2306
HpaII CCGG 1 cut(s) 422
Hpy166II GTNNAC 7 cut(s) 237, 619, 1659, 2155, 2351, 2412, 2546
Hpy188I TCNGA 9 cut(s) 114, 396, 538, 1261, 1524, 2026, 2149, 2395, 2536
Hpy188III TCNNGA 8 cut(s) 35, 250, 905, 1113, 1841, 1880, 1950, 2111
Hpy8I GTNNAC 7 cut(s) 237, 619, 1659, 2155, 2351, 2412, 2546
HpyAV CCTTC 2 cut(s) 1616, 1862
HpyCH4III ACNGT 5 cut(s) 260, 484, 748, 1199, 2159
HpyCH4IV ACGT 3 cut(s) 653, 1712, 2548
HpyF10VI GCNNNNNNNGC 7 cut(s) 23, 320, 329, 1441, 1563, 1936, 2246
HpyF3I CTNAG 4 cut(s) 179, 1498, 2112, 2186
HpySE526I ACGT 3 cut(s) 653, 1712, 2548
HspAI GCGC 1 cut(s) 210
KflI GGGWCCC 1 cut(s) 706
Ksp22I TGATCA 3 cut(s) 114, 886, 1519
Lsp1109I GCAGC 4 cut(s) 136, 139, 1570, 2384
LweI GCATC 6 cut(s) 301, 1106, 1379, 1580, 1849, 2324
MaeI CTAG 3 cut(s) 1004, 1164, 1983
MaeII ACGT 3 cut(s) 653, 1712, 2548
MaeIII GTNAC 6 cut(s) 188, 1079, 1199, 1347, 1592, 2099
MfeI CAATTG 1 cut(s) 722
MflI RGATCY 1 cut(s) 458
MlsI TGGCCA 2 cut(s) 17, 1056
MluNI TGGCCA 2 cut(s) 17, 1056
MlyI GAGTC 2 cut(s) 335, 374
MmeI TCCRAC 7 cut(s) 252, 294, 408, 605, 1259, 1695, 2470
Mox20I TGGCCA 2 cut(s) 17, 1056
Mph1103I ATGCAT 1 cut(s) 1573
MroXI GAANNNNTTC 2 cut(s) 1872, 2134
MscI TGGCCA 2 cut(s) 17, 1056
Msp20I TGGCCA 2 cut(s) 17, 1056
MspCI CTTAAG 1 cut(s) 1130
MspI CCGG 1 cut(s) 422
MspR9I CCNGG 4 cut(s) 423, 600, 684, 1293
MunI CAATTG 1 cut(s) 722
Mva1269I GAATGC 1 cut(s) 1788
MvaI CCWGG 3 cut(s) 600, 684, 1293
MwoI GCNNNNNNNGC 7 cut(s) 23, 320, 329, 1441, 1563, 1936, 2246
NciI CCSGG 1 cut(s) 423
NcoI CCATGG 1 cut(s) 76
NlaIV GGNNCC 6 cut(s) 262, 707, 708, 1010, 1244, 1326
NmuCI GTSAC 3 cut(s) 188, 1199, 1347
NsiI ATGCAT 1 cut(s) 1573
NspI RCATGY 3 cut(s) 1593, 1828, 2107
PaeR7I CTCGAG 1 cut(s) 1948
PaqCI CACCTGC 1 cut(s) 544
PciI ACATGT 1 cut(s) 1589
PctI GAATGC 1 cut(s) 1788
PdmI GAANNNNTTC 2 cut(s) 1872, 2134
PfeI GAWTC 7 cut(s) 503, 808, 1212, 1455, 2011, 2291, 2306
PflMI CCANNNNNTGG 1 cut(s) 683
PkrI GCNGC 5 cut(s) 151, 154, 1585, 2374, 2430
PleI GAGTC 2 cut(s) 335, 374
PpsI GAGTC 2 cut(s) 335, 374
PpuMI RGGWCCY 1 cut(s) 706
PscI ACATGT 1 cut(s) 1589
PsiI TTATAA 2 cut(s) 1440, 1644
Psp1406I AACGTT 1 cut(s) 1712
Psp5II RGGWCCY 1 cut(s) 706
Psp6I CCWGG 3 cut(s) 598, 682, 1291
PspGI CCWGG 3 cut(s) 598, 682, 1291
PspN4I GGNNCC 6 cut(s) 262, 707, 708, 1010, 1244, 1326
PspPI GGNCC 4 cut(s) 419, 686, 706, 1634
PspPPI RGGWCCY 1 cut(s) 706
PstNI CAGNNNCTG 1 cut(s) 1298
PsuI RGATCY 1 cut(s) 458
RsaI GTAC 9 cut(s) 59, 299, 481, 860, 1124, 1823, 1992, 2229, 2461
RsaNI GTAC 9 cut(s) 58, 298, 480, 859, 1123, 1822, 1991, 2228, 2460
SatI GCNGC 5 cut(s) 150, 153, 1584, 2373, 2429
Sau96I GGNCC 4 cut(s) 419, 686, 706, 1634
ScaI AGTACT 2 cut(s) 481, 2229
SchI GAGTC 2 cut(s) 335, 374
ScrFI CCNGG 4 cut(s) 423, 600, 684, 1293
SfaNI GCATC 6 cut(s) 301, 1106, 1379, 1580, 1849, 2324
SfcI CTRYAG 4 cut(s) 274, 2155, 2279, 2484
Sfr274I CTCGAG 1 cut(s) 1948
SinI GGWCC 3 cut(s) 419, 706, 1634
SlaI CTCGAG 1 cut(s) 1948
SmlI CTYRAG 5 cut(s) 205, 1099, 1130, 1920, 1948
SmoI CTYRAG 5 cut(s) 205, 1099, 1130, 1920, 1948
SpeI ACTAGT 1 cut(s) 1163
SsiI CCGC 5 cut(s) 222, 295, 762, 1046, 2429
SspI AATATT 2 cut(s) 166, 1159
SspMI CTAG 3 cut(s) 1004, 1164, 1983
StyD4I CCNGG 4 cut(s) 421, 598, 682, 1291
StyI CCWWGG 5 cut(s) 76, 213, 375, 697, 1207
TaaI ACNGT 5 cut(s) 260, 484, 748, 1199, 2159
TaiI ACGT 3 cut(s) 656, 1715, 2551
TaqI TCGA 5 cut(s) 924, 1215, 1881, 1949, 2224
TatI WGTACW 5 cut(s) 479, 1821, 1990, 2227, 2459
TauI GCSGC 1 cut(s) 2431
TfiI GAWTC 7 cut(s) 503, 808, 1212, 1455, 2011, 2291, 2306
TscAI CASTG 3 cut(s) 433, 684, 1683
TseFI GTSAC 3 cut(s) 188, 1199, 1347
TseI GCWGC 4 cut(s) 149, 152, 1583, 2372
Tsp45I GTSAC 3 cut(s) 188, 1199, 1347
TspGWI ACGGA 1 cut(s) 599
TspRI CASTG 3 cut(s) 433, 684, 1683
Van91I CCANNNNNTGG 1 cut(s) 683
Vha464I CTTAAG 1 cut(s) 1130
VpaK11BI GGWCC 3 cut(s) 419, 706, 1634
XapI RAATTY 8 cut(s) 729, 794, 1061, 1268, 2019, 2043, 2130, 2505
XceI RCATGY 3 cut(s) 1593, 1828, 2107
XcmI CCANNNNNNNNNTGG 1 cut(s) 629
XhoI CTCGAG 1 cut(s) 1948
XmiI GTMKAC 2 cut(s) 2154, 2350
XmnI GAANNNNTTC 2 cut(s) 1872, 2134
XspI CTAG 3 cut(s) 1004, 1164, 1983
ZrmI AGTACT 2 cut(s) 481, 2229
Zsp2I ATGCAT 1 cut(s) 1573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.